BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013705
(438 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 328 bits (840), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/351 (47%), Positives = 239/351 (68%), Gaps = 16/351 (4%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
DD +GH ++ +G+ L RY I+S +GEGTFG+VV+C D+ + VA+KI++++ KY+EA
Sbjct: 17 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
A +EI+VL+++ D CVQ+ +WFDY H+CI FE LG S +DFL+ N+Y +PI
Sbjct: 77 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
VR + QL ++V F+H+ +L HTDLKPENIL V+++Y + L + + S
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERSV--- 190
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E
Sbjct: 191 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G LFQTH+N EHLAMMER+LGP+P M+ + R +KYF RG RLDW + ++ +R
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 305
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
K LR L + +H L DL++ +L Y+PA+RL EAL+HPFF R
Sbjct: 306 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 35 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
A +EI+VL+++ D CV + +WF++ H+CI FE LG + ++FL++N+++ +P+
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH---KSCEEKSV--- 208
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 209 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 323
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 324 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 311 bits (796), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 12 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
A +EI+VL+++ D CV + +WF++ H+CI FE LG + ++FL++N+++ +P+
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 185
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 186 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 300
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 301 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 311 bits (796), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
A +EI+VL+++ D CV + +WF++ H+CI FE LG + ++FL++N+++ +P+
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 176
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 177 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 291
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 227/344 (65%), Gaps = 16/344 (4%)
Query: 81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
H + G+ L+ RY I+ +GEG FG+VVEC D++ VA+KIV+++++Y EAA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
VL+ L D T RCVQ+ WF++ HICIVFE LG S YDF+++N + F +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
+ Q+ +SV F+H +L HTDLKPENIL V ++Y + + K +D N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
TH++ EHLAMMER+LGPLP HM+ + +R KYF RLDW + +++ + K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ ++ Q V+H L DL+Q +L YDPA+R+ REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 225/344 (65%), Gaps = 16/344 (4%)
Query: 81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
H + G+ L+ RY I+ +GEG FG+VVEC D++ VA+KIV+++++Y EAA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
VL+ L D T RCVQ+ WF++ HICIVFE LG S YDF+++N + F +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
+ Q+ +SV F+H +L HTDLKPENIL V ++Y + + K +D N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
IK++DFGS T++ + HS +V RHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
TH++ EHLAMMER+LGPLP HM+ + +R KYF RLDW + +++ + K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ ++ Q V+H L DL+Q +L YDPA+R+ REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 210/353 (59%), Gaps = 12/353 (3%)
Query: 73 WRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
++ DD+ H+ + G L + ++ KMG+GTFG+V+ C + K+ A+K+VR+I KY
Sbjct: 16 FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
+A IE D+L+++ DI V+ F Y +H+C++FE LGPSLY+ + +N+Y F
Sbjct: 76 RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
I+ ++ ++L+++ ++ ++ L HTDLKPENILL + K R DG +
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL---ITVRRVTDGKKIQ 192
Query: 253 NL-PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
KS+ IKLIDFG TF+ H +++TR YRAPEVIL LGW+ D+WS GC+L EL
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGA-RLDWPDGATSRD 369
+G LF+THE++EHLAMME ++ P+P +M+ A + KY + +L WP+ A+S +
Sbjct: 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN 312
Query: 370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
S++ V K L L +I + D L +L+ DP R E L+H F
Sbjct: 313 SIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 195/373 (52%), Gaps = 41/373 (10%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G+FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
EI +L+ L + D T + + F +RNHIC+ FE L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 425 DVRRPTLLVATGE 437
+ +P TGE
Sbjct: 415 RLPKP----PTGE 423
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 194/373 (52%), Gaps = 41/373 (10%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
EI +L+ L + D T + + F +RNHIC+ FE L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 425 DVRRPTLLVATGE 437
+ +P TGE
Sbjct: 415 RLPKP----PTGE 423
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 189/360 (52%), Gaps = 37/360 (10%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G+FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
EI +L+ L + D T + + F +RNHIC+ FE L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 54/367 (14%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+HD V ++ F +RNH+C+VFE L +LYD LR ++R ++L R+ +Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
++ F+ EL +IH DLKPENILL + PK SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 184
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
++ + + VLG P H++ +A +A K+F + PDG + + + + P
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 298
Query: 384 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
H H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 299 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
Query: 424 RDVRRPT 430
+ T
Sbjct: 359 KTADEGT 365
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 189/361 (52%), Gaps = 54/361 (14%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+HD V ++ F +RNH+C+VFE L +LYD LR ++R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
++ F+ EL +IH DLKPENILL + PK SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 203
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
++ + + VLG P H++ +A +A K+F + PDG + + + + P
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 384 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
H H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 424 R 424
+
Sbjct: 378 K 378
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 188/361 (52%), Gaps = 54/361 (14%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+HD V ++ F +RNH+C+VFE L +LYD LR ++R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
++ F+ EL +IH DLKPENILL + PK AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIV 203
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
++ + + VLG P H++ +A +A K+F + PDG + + + + P
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 384 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
H H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 424 R 424
+
Sbjct: 378 K 378
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 194/387 (50%), Gaps = 46/387 (11%)
Query: 75 PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
P+D K G+++ IG+ RY ++ K+G G F V +D + K+ VA+K+V+S Y
Sbjct: 2 PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 61
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
E A+ EI +L+ + D VQ+ + F HIC+VFE LG L ++ K
Sbjct: 62 ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 121
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 238
++Y+ P+ V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++ ++
Sbjct: 122 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 181
Query: 239 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 282
+ GS P ++ +K+ D G+ + H+ + + TR
Sbjct: 182 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 241
Query: 283 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 336
YR+ EV++G G+N P D+WS C+ EL +G+ LF+ H E H+A++ +LG
Sbjct: 242 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 396
+P +++ A + ++++F + G + W L + + A
Sbjct: 302 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 397 DLLQGLLRYDPAERLKAREALRHPFFT 423
D L +L P +R A E LRHP+
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 194/387 (50%), Gaps = 46/387 (11%)
Query: 75 PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
P+D K G+++ IG+ RY ++ K+G G F V +D + K+ VA+K+V+S Y
Sbjct: 18 PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 77
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
E A+ EI +L+ + D VQ+ + F HIC+VFE LG L ++ K
Sbjct: 78 ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 137
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 238
++Y+ P+ V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++ ++
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197
Query: 239 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 282
+ GS P ++ +K+ D G+ + H+ + + TR
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 257
Query: 283 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 336
YR+ EV++G G+N P D+WS C+ EL +G+ LF+ H E H+A++ +LG
Sbjct: 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 396
+P +++ A + ++++F + G + W L + + A
Sbjct: 318 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 369
Query: 397 DLLQGLLRYDPAERLKAREALRHPFFT 423
D L +L P +R A E LRHP+
Sbjct: 370 DFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 52/385 (13%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
K G++ IG+ RY ++ K+G G F V C+D + K VA+K+V+S Y E A+
Sbjct: 17 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 138 EIDVLQRLARHDIGGTR---CVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRS 190
EI +L+ + D VQ+ + F H+C+VFE LG L ++ K++Y+
Sbjct: 77 EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 191 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDYKFLSR 243
P+ V+ + RQ+L+ + ++H + ++IHTD+KPENIL+ V YV+ +++
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 244 SSKDGSYFKNLPKSSA--------------IKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 289
GS P + +K+ D G+ + H+ + + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 290 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVI 343
++G G++ P D+WS C+ EL +G+ LF+ H + +H+A + +LG +P H +
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 344 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL--LRLPNLIMQHVD---HSAGDLIDL 398
E + RRG +R + KL L +++++ A D
Sbjct: 317 SGKYSREFFNRRG-------------ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDF 363
Query: 399 LQGLLRYDPAERLKAREALRHPFFT 423
L +L P +R A E LRHP+
Sbjct: 364 LIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 56/352 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
RY ++ K+G G F V D VA+KIVR Y EAA EI +LQR+ D
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+G +++ + F+++ H+ +VFE LG +L ++K +R P+ V+++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
LL + +MH +IHTD+KPEN+L+ E V P+ NL + IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
+ D G+ + + ++ + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 322 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E + +H+A + +LG LP ++ +R + +F SR +R +
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 376 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
KL P +++ + S A ++ D L +L+ DP +R A + HP+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 56/352 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
RY ++ K+G G F V D VA+KIVR Y EAA EI +LQR+ D
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+G +++ + F+++ H+ +VFE LG +L ++K +R P+ V+++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
LL + +MH +IHTD+KPEN+L+ E V P+ NL + IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
+ D G+ + + ++ + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 322 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E + +H+A + +LG LP ++ +R + +F SR +R +
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 376 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
KL P +++ + S A ++ D L +L+ DP +R A + HP+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 160/346 (46%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L DF+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L DF+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKPEN+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVR 158
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 214 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 258
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 160/346 (46%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L DF+ ++ P+ L++ QLL+ +AF
Sbjct: 67 -----VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 160
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 161 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 216 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 260
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKPEN+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 66 -----VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKPEN+L+ + +K+ D+ L+R+ FG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVR 159
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 160 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 215 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 259
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 67 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKPEN+L+ + +K+ D+ L+R+ FG
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVR 160
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 161 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 216 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 260
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 66 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKPEN+L+ + +K+ D+ L+R+ FG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVR 159
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 160 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 215 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 259
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 156/347 (44%), Gaps = 67/347 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 72 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 267
H R++H DLKP+N+L+ + AIKL DFG +
Sbjct: 127 HSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLARA 159
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++
Sbjct: 160 FGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
L + R LG P +V Y F + AR D+ D
Sbjct: 220 LFRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------- 265
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 266 ----------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 66 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 158
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 217 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 259
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 72 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 164
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 165 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 223 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 265
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 266 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 67 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 160
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 161 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 216 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 260
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 69 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 162
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 163 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 217
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 218 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 262
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 263 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 156/347 (44%), Gaps = 67/347 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 69 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 267
H R++H DLKP+N+L+ + AIKL DFG +
Sbjct: 124 HSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLARA 156
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++
Sbjct: 157 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
L + R LG P +V Y F + AR D+ D
Sbjct: 217 LFRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------- 262
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 263 ----------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 157
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 216 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 258
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 156
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 215 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 257
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 157
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 --RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 216 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 258
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE + L F+ ++ P+ L++ QLL+ +AF
Sbjct: 68 -----VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 161
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 162 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 217 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 261
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 157
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 216 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 258
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 156
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 215 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 257
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 66 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 159
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 160 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 215 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 259
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 67 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 160
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 161 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 215
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 216 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 260
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 157
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 213 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 257
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 158
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 214 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 258
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 158
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 214 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 258
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 158
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 214 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 258
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 66 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 159
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 160 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 214
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 215 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 259
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE + L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 156
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 215 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 257
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 157
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 213 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 257
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ ++F
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 157
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 216 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 258
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+ +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 157
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 158 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 216 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 258
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 61/344 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+ +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 64 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV- 156
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ R LG P +V Y F + AR D+ D
Sbjct: 215 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 257
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 161/335 (48%), Gaps = 55/335 (16%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
+Y + K+GEG++G V +C + + ++VAIK + S + ++ A+ EI +L++L +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
+ V + F + + +VFE ++ L + R P LV+ + Q L++V F
Sbjct: 64 L-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNF 117
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
H+ IH D+KPENIL+ +K+ D+ F + Y+ +
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD---------------- 161
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
V+TR YR+PE+++G + P D+W++GC+ EL SG L+ +++ L
Sbjct: 162 --------EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213
Query: 329 MMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
++ + LG L P H + + +YF G ++ P+ + L+ PN+
Sbjct: 214 LIRKTLGDLIPRHQQVFS---TNQYF-SGVKIPDPEDMEPLE--------LKFPNI---- 257
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ + LL+G L DP ERL + L HP+F
Sbjct: 258 ----SYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 154/338 (45%), Gaps = 64/338 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + N + +VFE L L F+ ++ P+ L++ QLL+ +AF
Sbjct: 65 -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-- 268
H R++H DLKP+N+L+ + +K+ D+ L+R+ FG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVR 158
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
T+ H+ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L
Sbjct: 159 TYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
Query: 328 AMMERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ R LG P +V Y F + AR D+ D
Sbjct: 214 FRIFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE-------------- 258
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
D LL +L YDP +R+ A+ AL HPFF
Sbjct: 259 ---------DGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 160/340 (47%), Gaps = 54/340 (15%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
+ +++ L K+G GT+ V + + VA+K V+ S A+ EI +++ L
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRELGRQLL 204
+I V++ + N + +VFE + L ++ N+ R ++LV+ QLL
Sbjct: 64 NI-----VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +AF HE +++H DLKP+N+L+ +K+ D+ L ++ I +
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDF--------------GLARAFGIPVNT 164
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
F S V T YRAP+V++G ++ D+WS GCIL E+ +G+ LF +
Sbjct: 165 FSSE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
E L ++ ++G P+ + + + KY + RD L +
Sbjct: 215 EEQLKLIFDIMG-TPNESLWPSVTKLPKYNPNIQQ------RPPRD----------LRQV 257
Query: 384 IMQHVDHSA-GDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ H G+L+D L GLL+ +P RL A++AL HP+F
Sbjct: 258 LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + +V +G LY L+ + D +
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 183
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 184 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 292
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 293 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 183
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 184 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 292
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 293 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L +I G + + + IV + + LY L+ + D +
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + +S +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TSDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL-----LSLP------HKNK 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 26 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 138
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 171
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 172 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 232 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 280
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 281 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 61/339 (17%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLA 146
RY L +GEG F V + D ++VAIK ++ + + A+ EI +LQ L+
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+I G + + F ++++I +VF+ + L ++ NS P ++ L+
Sbjct: 71 HPNIIG-----LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQG 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H+ ++H DLKP N+LL +K+ D+ L KS FG
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADF--------------GLAKS-------FG 163
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
S ++ + + V TR YRAPE++ G + D+W+VGCIL EL +L+
Sbjct: 164 SP---NRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
L + LG WPD + D + P + +
Sbjct: 221 QLTRIFETLG-------------------TPTEEQWPDMCSLPDYV----TFKSFPGIPL 257
Query: 386 QHVDHSAGD-LIDLLQGLLRYDPAERLKAREALRHPFFT 423
H+ +AGD L+DL+QGL ++P R+ A +AL+ +F+
Sbjct: 258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 168
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 169 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 278 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 168
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 169 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 278 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 24 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 169
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 170 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 230 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 278
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 279 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 15 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 127
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 160
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 161 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 221 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 269
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 270 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 161
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 270
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 271 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 161
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL-----LSLPHKN------K 270
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 271 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 149/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAI+ + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L R +I G + + + IV + + LY L+ + D +
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 68/349 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
+Y ++++GEG +G+V + D VA+K VR ++ RE A++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
++ V + D + +VFE + L +L K P + ++++ QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L + F+H R++H DLKP+NIL+ S S IKL
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLA 162
Query: 264 DFGST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
DFG +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 163 DFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLR 379
+++ L + V+G LP DWP D A R + + K +
Sbjct: 222 SSDVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQ 260
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
+ +D DLL L ++PA+R+ A AL HP+F +D+ R
Sbjct: 261 PIEKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 67/343 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
+Y ++++GEG +G+V + D VA+K VR ++ RE A++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
++ V + D + +VFE + L +L K P + ++++ QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L + F+H R++H DLKP+NIL+ S S IKL
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLA 162
Query: 264 DFGST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
DFG +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 163 DFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLR 379
+++ L + V+G LP DWP D A R + + K +
Sbjct: 222 SSDVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQ 260
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ +D DLL L ++PA+R+ A AL HP+F
Sbjct: 261 PIEKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 68/349 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
+Y ++++GEG +G+V + D VA+K VR ++ RE A++ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
++ V + D + +VFE + L +L K P + ++++ QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L + F+H R++H DLKP+NIL+ S S IKL
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLA 162
Query: 264 DFGST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
DFG +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 163 DFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLR 379
+++ L + V+G LP DWP D A R + + K +
Sbjct: 222 SSDVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQ 260
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
+ +D DLL L ++PA+R+ A AL HP+F +D+ R
Sbjct: 261 PIEKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 60/346 (17%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA 146
++ PRY L +GEG +G V +D+ +K VAIK + Y + + EI +L R
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
++ G R + + + + IV + + LY L+ + D + Q+L
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRG 156
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H ++H DLKP N+L+ + + +K+ DFG
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFG 189
Query: 267 STTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319
+H + V+TR YRAPE++L G+ D+WSVGCIL E+ S +F
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
L+ L + +LG P + + +A Y + + + W L
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-----------SLPSKTKVAWAKL 298
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
S +DLL +L ++P +R+ EAL HP+ +
Sbjct: 299 ---------FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
+L +I G + + + IV + + LY L+ + D +
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L + ++H ++H DLKP N+LL + + +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
K+ DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F L+ L + +LG P + + +A Y L P +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
W N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 98/378 (25%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
E + +Y + +G G+FG V E FD E + A+K V +Y+ E+D+++ L
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR---ELDIMKVLDH 59
Query: 148 --------------------------HDIGGTRCVQIRNWF-------DYRNHICIVFEK 174
H+ G + + N ++ ++ E
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 175 LGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
+ +L+ L+ S RS P++L+ QL +V F+H L + H D+KP+N+L+ S
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--- 176
Query: 233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQDHSYVVSTRHYRAPEVI 290
K + +KL DFGS + + +R YRAPE++
Sbjct: 177 -----------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELM 213
Query: 291 LGLGWNYPC-DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRR 348
LG P DLWS+GC+ EL G+ LF +++ L + +++G P M+
Sbjct: 214 LGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY 273
Query: 349 AEKYFRRGARLDW----PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 404
E F DW P+G S IDLL+ +LR
Sbjct: 274 TEVRFPTLKAKDWRKILPEGTPSL--------------------------AIDLLEQILR 307
Query: 405 YDPAERLKAREALRHPFF 422
Y+P R+ EA+ HPFF
Sbjct: 308 YEPDLRINPYEAMAHPFF 325
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 146/356 (41%), Gaps = 63/356 (17%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EI 139
+G T RY ++++G G +G V + D VA+K VR N + E+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 140 DVLQRLARHDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
+L+RL + C R D + +VFE + L +L K P +
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
+++L RQ L + F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL 176
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ VV T YRAPEV+L + P D+WSVGCI E+
Sbjct: 177 ---------------------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRA 373
+ LF + + L + ++G P DWP D + R +
Sbjct: 216 KPLFCGNSEADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP 256
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
R P + V LL +L ++P +R+ A AL+H + +D P
Sbjct: 257 -----RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 142/348 (40%), Gaps = 60/348 (17%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLAR 147
T RY ++++G G +G V + D VA+K VR N + + E+ +L+RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 148 HDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ C R D + +VFE + L +L K P + +++L RQ
Sbjct: 63 FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L + F+H ++H DLKPENIL+ S VK+ D+ S + F
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---------- 170
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 171 ---------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
+ L + ++G P DWP D + R + R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 39/347 (11%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
+Y ++ K+G+G +G V + D E+VA+K I + +A EI +L L+ H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 150 IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
V + N D + +VF+ + L+ +R N V QL++ +
Sbjct: 70 ----NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVI 122
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++H L+H D+KP NILL + +VKV D+ LSRS F N+ + + +
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFG-LSRS------FVNIRRVTNNIPLSINE 175
Query: 268 TTFEHQDHSYV----VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
T D + V+TR YRAPE++LG + D+WS+GCIL E+ G+ +F
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 323 NLEHLAMMERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR----AVWK 376
+ L ER++G + P + + + + F + + R S + WK
Sbjct: 236 TMNQL---ERIIGVIDFPSNEDVES---IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWK 289
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
L L I D + + +DLL LL+++P +R+ A +AL+HPF +
Sbjct: 290 NLLLK--INPKADCNE-EALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 145/348 (41%), Gaps = 60/348 (17%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
T RY ++++G G +G V + D VA+K VR I+ RE A++ L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ V + D + +VFE + L +L K P + +++L RQ
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L + F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-------- 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
+ VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 169 -------------APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
+ L + ++G P DWP D + R + R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 144/348 (41%), Gaps = 60/348 (17%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
T RY ++++G G +G V + D VA+K VR I+ RE A++ L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ V + D + +VFE + L +L K P + +++L RQ
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L + F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-------- 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 169 -------------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
+ L + ++G P DWP D + R + R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKSQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + S +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 156/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 80 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + S +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 156/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 84 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + S +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 149/344 (43%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V +D + +A+K I+ + YRE ++ +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL------K 105
Query: 145 LARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+H+ IG + N + +V +G L + ++ + D V+ L Q
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 162
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLA---------------------------VNEDCELKI 195
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 196 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
+++ L + R+ G P ++ R S ++ + L ++P
Sbjct: 256 DHINQLQQIMRLTGTPPASVISR--------------------MPSHEARNYINSLPQMP 295
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
V A L +DLL+ +L D +R+ A EAL HP+F++
Sbjct: 296 KRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 38/337 (11%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+I +Q + F+ N + I+ E + L+ R S + D ++ Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H +IH DLKP N+L+ S +KV D+ L+R + + + P +++F
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-LARIIDESAADNSEPTGQQSGMVEF- 182
Query: 267 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
L ++ ++G PH L + +R+ ++++ P M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 153/360 (42%), Gaps = 73/360 (20%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE Y +G G+FG V + E E VAIK V +++ + + R+
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNREL----QIMRIV 89
Query: 147 RHDIGGTRCVQIRNWFDYRN-------HICIVFEKLGPSLYDFLRKNSY--RSFPIDLVR 197
+H V ++ +F Y N + +V E + ++Y R + ++ P+ L++
Sbjct: 90 KH----PNVVDLKAFF-YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK 144
Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
QLL S+A++H + + H D+KP+N+LL P S
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--------------------------PPS 178
Query: 258 SAIKLIDFGSTTF--EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG 314
+KLIDFGS + + + +R+YRAPE+I G + D+WS GC++ EL G
Sbjct: 179 GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ LF ++ L + +VLG P I+ + + M
Sbjct: 239 QPLFPGESGIDQLVEIIKVLG-TPSREQIK--------------------TMNPNYMEHK 277
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF----TRDVRRPT 430
+ +R + D IDL+ LL Y P+ RL A EAL HPFF T + R P
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPN 337
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 97 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 185
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 246 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 285
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 286 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 74 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 163 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 98 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 74 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 84 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ D V+ L Q
Sbjct: 74 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+I +Q + F+ N + I+ E + L+ R S + D ++ Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
V +H +IH DLKP N+L+ S +KV D+ + + S+ D S
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-------------- 170
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
T + + V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 171 ---EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
L ++ ++G PH L + +R+ ++++ P
Sbjct: 228 YRHQLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
M + G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 272 EKMFPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 83 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 74 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+I +Q + F+ N + I+ E + L+ R S + D ++ Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
V +H +IH DLKP N+L+ S +KV D+ + + S+ D S
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-------------- 170
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
T + + V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 171 ---EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
L ++ ++G PH L + +R+ ++++ P
Sbjct: 228 YRHQLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
M + G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 272 EKMFPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 98 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 75 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 163
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 224 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 263
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 264 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 98 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 187 LDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 89 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 238 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 277
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 90 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 189
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 190 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 250 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 289
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 290 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 75
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 76 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 131
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 164
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 165 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 225 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 264
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 265 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 89 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 238 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 277
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 84 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 97 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 185
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 246 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 285
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 286 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 90 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 90 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 83 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 80 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 85 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 174 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 83 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 76
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 77 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 132
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 165
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 166 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 226 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 265
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 266 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 85 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 84 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 80 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 75 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 163
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 224 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 263
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 264 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 83 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 85 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 85 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 154/337 (45%), Gaps = 50/337 (14%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
RYR ++K+GEGT+G+V + D E VAIK +R ++ A+ E+ +L+ L +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
I +++++ + + + ++FE L ++ KN S + +++ QL+ V F
Sbjct: 95 I-----IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--MRVIKSFLYQLINGVNF 147
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
H R +H DLKP+N+LL ++ + P K G + L ++ I + F
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKI-------GDF--GLARAFGIPIRQF---- 194
Query: 270 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
++ + T YR PE++LG ++ D+WS+ CI E+ LF ++ L
Sbjct: 195 ------THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ VLG LP WP G T+ + + R L
Sbjct: 249 KIFEVLG-LPDDTT------------------WP-GVTALPDWKQSFPKFRGKTLKRVLG 288
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ +DLL +L DP +R+ A+ AL HP+F+ +
Sbjct: 289 ALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 80 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ L+ +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 87
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 88 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 176
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 177 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 237 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 276
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 277 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 156/373 (41%), Gaps = 71/373 (19%)
Query: 63 GAIPRTGSPPWRPDDKDGHY---VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL 119
G +PR R K G Y V L Y + +G G +G V D E
Sbjct: 13 GLVPRGSMSLIR---KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEK 69
Query: 120 VAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-----TRCVQIRNWFDYRNHICIV 171
VAIK + R + + A E+ +L+ + ++ G T +RN++D
Sbjct: 70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD-------- 121
Query: 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
F + P + L+K F + ++ L Q+L+ + ++H ++H DLKP N+
Sbjct: 122 FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL------ 175
Query: 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL 291
+ + +K++DFG + + V TR YRAPEVIL
Sbjct: 176 ---------------------AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVIL 214
Query: 292 G-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 350
+ +N D+WSVGCI+ E+ +G+ LF+ + L+ L + +V G V + + +A
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274
Query: 351 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAE 409
K + + L + P Q ++ DLL+ +L D +
Sbjct: 275 KSY--------------------IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 314
Query: 410 RLKAREALRHPFF 422
RL A +AL HPFF
Sbjct: 315 RLTAAQALTHPFF 327
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 189
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+DFG + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 190 LDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 250 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 289
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 290 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + +K+ D+ +L+R + D
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF-YLARHTDD--------------- 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 178 -----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+D+G + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 65/345 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y+++ K+G G + +V E + E V +KI++ + K + EI +L+ L GG
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--EIKILENLR----GGP 92
Query: 154 RCVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
+ + + +VFE + + DF K Y++ +R ++L+++ + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+ ++H D+KP N++ + E+ K ++LID+G F
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEFY 182
Query: 272 H--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHL 327
H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 328 AMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
+ +VLG + I D R R +R W S +
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN------------- 289
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
QH+ + + +D L LLRYD RL AREA+ HP+F V+
Sbjct: 290 ---QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 65/335 (19%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
+ +G G +G V D E VAIK + R + + A E+ +L+ + ++ G
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 153 ---TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
T +RN++D F + P + L+K F + ++ L Q+L+ + +
Sbjct: 90 DVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
+H ++H DLKP N+ + + +K++DFG
Sbjct: 142 IHSAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLAR 174
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + V TR YRAPEVIL + +N D+WSVGCI+ E+ +G+ LF+ + L+ L
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQH 387
+ +V G V + + +A K + + L + P Q
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQL 274
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
++ DLL+ +L D +RL A +AL HPFF
Sbjct: 275 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 159/350 (45%), Gaps = 75/350 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
R+++ G+GTFG V + VAIK V ++R E+ ++Q LA +
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAV--LHH 78
Query: 153 TRCVQIRNWF------DYRN-HICIVFEKLGPSLYDFLRKNSYR---SFPIDLVRELGRQ 202
VQ++++F D R+ ++ +V E + +L+ R N YR + P L++ Q
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKVFLFQ 137
Query: 203 LLESVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
L+ S+ +H + + H D+KP N+L+ A DG+ +
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEA----------------DGT----------L 171
Query: 261 KLIDFGST---TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEA 316
KL DFGS + + +Y+ S R+YRAPE+I G + D+WSVGCI E+ GE
Sbjct: 172 KLCDFGSAKKLSPSEPNVAYICS-RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIR----ADRRAEKYFRRGARLDWPDGATSRDSMR 372
+F+ + L + RVLG P V+R + + Y +G + W
Sbjct: 231 IFRGDNSAGQLHEIVRVLG-CPSREVLRKLNPSHTDVDLYNSKG--IPW----------- 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
N+ H A + DLL LL+Y P ER+K EAL HP+F
Sbjct: 277 --------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+ FG + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+D G + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 72/345 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L +I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
V++ + + + +VFE L L L + +SF + QL
Sbjct: 63 -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L +A+ H+ R++H DLKP+N+L+ +K+ D+ L+R+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA------------------- 149
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG + +++ V T YRAP+V++G ++ D+WSVGCI E+ +G LF
Sbjct: 150 -FGIPV---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRL 380
+ L + R+LG P+ +WP+ D V++ L
Sbjct: 206 EADQLMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPW 246
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ ++ +D S IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 247 ESF-LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 72/345 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L +I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
V++ + + + +VFE L L L + +SF + QL
Sbjct: 63 -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L +A+ H+ R++H DLKP+N+L+ +K+ D+ L+R+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA------------------- 149
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG + +++ V T YRAP+V++G ++ D+WSVGCI E+ +G LF
Sbjct: 150 -FGIPV---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRL 380
+ L + R+LG P+ +WP+ D V++ L
Sbjct: 206 EADQLMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPW 246
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ ++ +D S IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 247 ESF-LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 156/345 (45%), Gaps = 72/345 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L +I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
V++ + + + +VFE L L L + +SF + QL
Sbjct: 63 -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L +A+ H+ R++H DLKP+N+L+ +K+ D+ L+R+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA------------------- 149
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG + +++ + T YRAP+V++G ++ D+WSVGCI E+ +G LF
Sbjct: 150 -FGIPV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRL 380
+ L + R+LG P+ +WP+ D V++ L
Sbjct: 206 EADQLMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPW 246
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ ++ +D S IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 247 ESF-LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+D G + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
RY+ LS +G G +G V FD + VA+K I+ + YRE + +L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+ ++ G V R+ ++ N + +V +G L + ++ + D V+ L Q
Sbjct: 78 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + ++H +IH DLKP N+ + + +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
+D G + + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF
Sbjct: 167 LDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
++++ L ++ R++G GA L +S + + L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ +V A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 155/345 (44%), Gaps = 67/345 (19%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
+ L +Y+ L K+GEGT+G V + D++ + +VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
L +I V + + + +VFE + L L +N ++ QLL
Sbjct: 76 LHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
VA H+ R++H DLKP+N+L+ S DG A+KL D
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINS-----------------DG----------ALKLAD 162
Query: 265 FG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT 320
FG + + +++ V T YRAP+V++G ++ D+WS+GCI E+ +G+ LF
Sbjct: 163 FGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 321 HENLEHLAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
+ + L + +LG P P V ++ F+ + W
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS-------------- 268
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+P + IDLL +L +DP +R+ AR+A+ HP+F
Sbjct: 269 -IIPGFCQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 155/345 (44%), Gaps = 67/345 (19%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
+ L +Y+ L K+GEGT+G V + D++ + +VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
L +I V + + + +VFE + L L +N ++ QLL
Sbjct: 76 LHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
VA H+ R++H DLKP+N+L+ S DG A+KL D
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINS-----------------DG----------ALKLAD 162
Query: 265 FG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT 320
FG + + +++ V T YRAP+V++G ++ D+WS+GCI E+ +G+ LF
Sbjct: 163 FGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 321 HENLEHLAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
+ + L + +LG P P V ++ F+ + W
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS-------------- 268
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+P + IDLL +L +DP +R+ AR+A+ HP+F
Sbjct: 269 -IIPGFCQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 76/348 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
R + L +G G +G V +D ++ VA+K ++ + YRE + +L+
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
L ++ G T I ++ + + +V +G L + ++ ++ + V+ L
Sbjct: 84 LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKS---QALSDEHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
QLL + ++H +IH DLKP N+ + + S
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSE 169
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
++++DFG ++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
+ ++ L +ME V P P + + A Y + L
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 268
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+P + + A L IDLL +L D +R+ A EAL H +F++
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 58/336 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD- 149
YR L +G G +G V D VAIK + R + + A E+ +L+ + RH+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHEN 85
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
IG D +V +G L ++ + D ++ L Q+L+ +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLR 142
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H +IH DLKP N+ + + +K++DFG
Sbjct: 143 YIHAAGIIHRDLKPGNL---------------------------AVNEDCELKILDFGLA 175
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ V TR YRAPEVIL + + D+WSVGCI+ E+ +G+ LF+ ++L+ L
Sbjct: 176 RQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRG-ARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ +V G P V R K + +G L+ D A+ I+
Sbjct: 236 KEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-----------------ILT 278
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ A ++LL+ +L D +R+ A EAL HP+F
Sbjct: 279 NASPLA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 76/348 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
R + L +G G +G V +D ++ VA+K ++ + YRE + +L+
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
L ++ G T I ++ + + +V +G L + ++ ++ + V+ L
Sbjct: 84 LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
QLL + ++H +IH DLKP N+ + + S
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSE 169
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
++++DFG ++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
+ ++ L +ME V P P + + A Y + L
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 268
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+P + + A L IDLL +L D +R+ A EAL H +F++
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 75/348 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L +GEG++G V++C + + +VAIK + ++ AM EI +L++L +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 150 IGG--TRCVQIRNW---FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+ C + + W F++ +H + +L P+ D+ +V++ Q++
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY-----------QVVQKYLFQII 134
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ F H +IH D+KPENIL+ + VK+ D+ F + G + +
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD----------- 183
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
V+TR YRAPE+++G + + D+W++GC++ E+ GE LF +
Sbjct: 184 -------------EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 324 LEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
++ L + LG L P H ++ F + V+ +RLP
Sbjct: 231 IDQLYHIMMCLGNLIPRH---------QELFNKN----------------PVFAGVRLPE 265
Query: 383 L-----IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ + + + +IDL + L DP +R E L H FF D
Sbjct: 266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 158/369 (42%), Gaps = 52/369 (14%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAI-KIVRSINKYREAAMI--EIDVLQRLARHD 149
RY I +G G++G V E +D +K +VAI KI+R + I EI +L RL
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL-VRELGRQLLESVA 208
+ + I + + + +V E R Y + +L ++ L LL V
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT---ELHIKTLLYNLLVGVK 170
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++H ++H DLKP N L+ VKV D+ + + S P+ + L+ F
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHEN 323
T + + V TR YRAPE+IL L NY D+WS+GCI EL L EN
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELIL-LQENYTEAIDVWSIGCIFAEL-----LNMIKEN 284
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
+ + A L P + D++A F+ R +RD + ++ +L P+
Sbjct: 285 VAYHA-DRGPLFPGSSCFPLSPDQKAGNDFKFHTR-------GNRDQLNVIFNILGTPSE 336
Query: 384 -------------------------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+ + S+ D I LL+ +L ++P +R+ E L
Sbjct: 337 EDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA 396
Query: 419 HPFFTRDVR 427
HPFF ++VR
Sbjct: 397 HPFF-KEVR 404
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 158
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 219 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 252
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 253 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 311
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 312 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 352
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 353 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 398
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 117
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 178 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 211
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 212 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 270
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 271 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 311
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 312 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 357
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 107
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 168 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 201
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 202 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 260
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 261 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 301
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 302 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 347
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 115
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 176 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 209
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 210 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 268
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 269 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 309
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 310 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 355
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 174 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 207
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 208 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 267 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 307
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 308 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 174 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 207
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 268 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 307
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 308 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 152 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 185
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 246 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 285
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 286 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 98
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 159 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 192
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 253 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 292
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 293 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 338
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 152 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 185
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 246 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 285
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 286 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 84
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 145 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 178
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 179 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 237
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+ +VLG P IR F+ P W + P
Sbjct: 238 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 278
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 279 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 324
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 92
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 153 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 186
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 247 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 286
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 287 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 332
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 87
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 148 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 181
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 242 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 281
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 282 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 327
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 83
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 144 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 177
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 178 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 238 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 277
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 323
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V ++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG + R ++ + A + K+ R
Sbjct: 234 EIIKVLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR--------- 272
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 80
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 141 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 174
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 175 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 235 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 274
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 275 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 320
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V +++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 76/348 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
R + L +G G +G V +D ++ VA+K ++ + YRE + +L+
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 75
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
L ++ G T I ++ + + +V +G L + ++ ++ + V+ L
Sbjct: 76 LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 128
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
QLL + ++H +IH DLKP N+ + +
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDCE 161
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
++++DFG ++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF
Sbjct: 162 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
+ ++ L +ME V P P + + A Y + L
Sbjct: 222 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 260
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
+P + + A L IDLL +L D +R+ A EAL H +F++
Sbjct: 261 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V ++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG + R ++ + A + K+ R
Sbjct: 234 EIIKVLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR--------- 272
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 62/339 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L K+GEGT+G V + + E E+VA+K VR + +A+ EI +L+ L +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
I V++ + + +VFE L + + P ++V+ QLL+ + F
Sbjct: 63 I-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--- 266
H ++H DLKP+N+L+ ++ +KL +FG
Sbjct: 117 CHSRNVLHRDLKPQNLLI---------------------------NRNGELKLANFGLAR 149
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENL 324
+ + +S V T YR P+V+ G ++ D+WS GCI EL +G LF ++
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ L + R+LG WP D + + +
Sbjct: 210 DQLKRIFRLLG-------------------TPTEEQWPSMTKLPD--YKPYPMYPATTSL 248
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+ V DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 147/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G+FG V + + ELVAIK V ++ E+ ++++L +I V++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
+F ++ +V + + ++Y R S ++ P+ V+ QL S+A++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
+ H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
+ + + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
+ +VLG P IR F+ P W + P
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
+ + I L LL Y P RL EA H FF ++R P + + G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 62/339 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L K+GEGT+G V + + E E+VA+K VR + +A+ EI +L+ L +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
I V++ + + +VFE L + + P ++V+ QLL+ + F
Sbjct: 63 I-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--- 266
H ++H DLKP+N+L+ ++ +KL DFG
Sbjct: 117 CHSRNVLHRDLKPQNLLI---------------------------NRNGELKLADFGLAR 149
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENL 324
+ + +S V T YR P+V+ G ++ D+WS GCI EL + LF ++
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ L + R+LG WP D + + +
Sbjct: 210 DQLKRIFRLLG-------------------TPTEEQWPSMTKLPD--YKPYPMYPATTSL 248
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+ V DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 154/360 (42%), Gaps = 60/360 (16%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA 134
+ Y IG++ + RY+ L +G G G V +D + VAIK + R A
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 135 --AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
A E+ VL ++ H IG + + + IV E + +L ++
Sbjct: 68 KRAYREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----ME 122
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTS 179
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
F P YVV TR+YRAPEVILG+G+ D+WSVGCI+ E
Sbjct: 180 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 311 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 363
+ G LF ++++ ++E++ P P M V KY +PD
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 278 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 53/332 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLARHDIG 151
Y L K+GEGT+ V + LVA+K +R ++ A+ E+ +L+ L +I
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI- 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V + + + +VFE L L +L + + V+ QLL +A+ H
Sbjct: 63 ----VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+++H DLKP+N+L+ +K+ D+ L+R+ K++P + T++
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFG-LARA-------KSIP-----------TKTYD 158
Query: 272 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
++ V T YR P+++LG ++ D+W VGCI E+ +G LF E L +
Sbjct: 159 NE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
R+LG WP G S + + ++ H
Sbjct: 214 FRILGTPTEET-------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPR 253
Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
D DLL LL+++ R+ A +A++HPFF
Sbjct: 254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 154/360 (42%), Gaps = 60/360 (16%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA 134
+ Y IG++ + RY+ L +G G G V +D + VAIK + R A
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 135 --AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
A E+ VL ++ H IG + + + IV E + +L ++
Sbjct: 68 KRAYREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----ME 122
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTS 179
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
F P YVV TR+YRAPEVILG+G+ D+WSVGCI+ E
Sbjct: 180 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 311 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 363
+ G LF ++++ ++E++ P P M V KY +PD
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 278 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 154/365 (42%), Gaps = 70/365 (19%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
+ Y IG++ + RY+ L +G G G VV +D + VAIK + +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
YRE VL ++ H IG + + + IV E + +L ++
Sbjct: 68 KRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM-----VIRA-DRRAEKYFRRGAR 358
I+ E+ G LF ++++ ++E++ P P M +R KY
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 91/343 (26%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ +F+ + + +V E G L+D + R +D R + RQ+L
Sbjct: 108 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 160
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ +++H DLKPEN+LL S SKD + I++ID
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIID 196
Query: 265 FG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG ST FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---- 251
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLR 379
+GA D ++ V K
Sbjct: 252 ----------------------------------------NGANEYDILKKVEKGKYTFE 271
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
LP + V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 272 LPQ--WKKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 309
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 91/343 (26%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ +F+ + + +V E G L+D + R +D R + RQ+L
Sbjct: 90 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 142
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ +++H DLKPEN+LL S SKD + I++ID
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIID 178
Query: 265 FG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG ST FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---- 233
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLR 379
+GA D ++ V K
Sbjct: 234 ----------------------------------------NGANEYDILKKVEKGKYTFE 253
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
LP + V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 254 LPQ--WKKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 291
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 5 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 65 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 122
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 123 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 178
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F +P V TR+YRAPEVILG+G+ D+WSVG
Sbjct: 179 --GTSFMMVP----------------------FVVTRYYRAPEVILGMGYKENVDIWSVG 214
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 215 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 274
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 275 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 419 HPFFT 423
HP+
Sbjct: 320 HPYIN 324
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 4 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 64 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 121
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 122 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 177
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 178 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 213
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 214 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 273
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 274 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Query: 419 HPFFT 423
HP+
Sbjct: 319 HPYIN 323
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 91/343 (26%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ +F+ + + +V E G L+D + R +D R + RQ+L
Sbjct: 107 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 159
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ +++H DLKPEN+LL S SKD + I++ID
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIID 195
Query: 265 FG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG ST FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---- 250
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLR 379
+GA D ++ V K
Sbjct: 251 ----------------------------------------NGANEYDILKKVEKGKYTFE 270
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
LP + V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 271 LPQ--WKKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 308
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 155/349 (44%), Gaps = 84/349 (24%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI 137
G ++ + +L+ Y+ + K+G G +G+V+ C D AIKI+R S++ + ++
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDL 195
E + +L H +++ ++F D RN+ ++ G L+D + + + +
Sbjct: 85 EEVAVLKLLDH----PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
+ +Q+L V ++H+ ++H DLKPEN+LL S E
Sbjct: 141 II---KQVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------ 173
Query: 256 KSSAIKLIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
K + IK++DFG S FE+Q + T +Y APEV L ++ CD+WS+G IL L +
Sbjct: 174 KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLA 232
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G F + E L R+ EK G + DS
Sbjct: 233 GYPPFGGQTDQEIL-------------------RKVEK------------GKYTFDSPE- 260
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
WK +V A DLI + +L++D R+ A++AL HP+
Sbjct: 261 -WK----------NVSEGAKDLI---KQMLQFDSQRRISAQQALEHPWI 295
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P+ V TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTPE----------------------VVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNALKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 91/343 (26%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ +F+ + + +V E G L+D + R +D R + RQ+L
Sbjct: 84 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ +++H DLKPEN+LL S SKD + I++ID
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIID 172
Query: 265 FG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG ST FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---- 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLR 379
+GA D ++ V K
Sbjct: 228 ----------------------------------------NGANEYDILKKVEKGKYTFE 247
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
LP + V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 248 LPQ--WKKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 285
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 77/318 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-AMIEIDVLQRLARHDIGGTRCVQI 158
+GEG+F +C + + A+KI I+K EA EI L+ H V++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGH----PNIVKL 71
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
F + H +V E L G L++ ++K + F + R+L+ +V+ MH++ ++H
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
DLKPEN+L F + + IK+IDFG + D+
Sbjct: 130 RDLKPENLL------------------------FTDENDNLEIKIIDFGFARLKPPDNQP 165
Query: 278 VVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
+ + T HY APE++ G++ CDLWS+G IL + SG+ FQ+H +R L
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH---------DRSL 216
Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
+++ ++ + F A WK +V A D
Sbjct: 217 TCTSAVEIMKKIKKGDFSFEGEA-----------------WK----------NVSQEAKD 249
Query: 395 LIDLLQGLLRYDPAERLK 412
LI QGLL DP +RLK
Sbjct: 250 LI---QGLLTVDPNKRLK 264
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 141/342 (41%), Gaps = 84/342 (24%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ + + IV E G L+D + K + F + +Q+
Sbjct: 79 DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ ++H DLKPENILL S E K IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG +T Q+ + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN 226
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
+ L +E KY D P T D
Sbjct: 227 EYDILKRVE-----------------TGKY-----AFDLPQWRTISD------------- 251
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
D DL++ +L + P+ R+ A + L HP+ +
Sbjct: 252 -----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 141/342 (41%), Gaps = 84/342 (24%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ + + IV E G L+D + K + F + +Q+
Sbjct: 79 DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ ++H DLKPENILL S E K IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG +T Q+ + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN 226
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
+ L +E KY D P T D
Sbjct: 227 EYDILKRVE-----------------TGKY-----AFDLPQWRTISD------------- 251
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
D DL++ +L + P+ R+ A + L HP+ +
Sbjct: 252 -----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 70/365 (19%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
+ Y IG++ + RY+ L +G G G V +D + VAIK + +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
YRE VL ++ H IG + + + IV E + +L ++
Sbjct: 68 KRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
I+ E+ G LF ++++ ++E++ P P M V KY
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 58/352 (16%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
F + ++ Y I+ +G G +G V + VAIK + + + + + E+
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
+L+ +I + + +R Y + +V + + L+ + +S + ++ VR
Sbjct: 107 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRY 163
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLP 255
QLL + +MH ++IH DLKP N+L+ +K+ D+ + L S + YF
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM--- 220
Query: 256 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG 314
+ V+TR YRAPE++L L + DLWSVGCI E+ +
Sbjct: 221 --------------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
LF + L ++ VLG P VI+ A + +RA
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAY 299
Query: 375 WKLLRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ L + + D + LL +LR++P+ R+ A ALRHPF +
Sbjct: 300 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 68
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMSYL 124
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP---- 177
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 178 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 278 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 75
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMSYL 131
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP---- 184
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 284
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 38/232 (16%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I +++ + + IV E G L+D + K + F + +Q+
Sbjct: 79 DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ +MH+ ++H DLKPENILL S E K IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
FG +T Q+ + T +Y APEV+ G ++ CD+WS G IL L SG
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 57/343 (16%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLARHD 149
RY+ L +G G G V +D VAIK + R A A E+ VL + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYREL-VLMKXVNHK 83
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
I + + + +V E + +L ++ + + L Q+L +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMSYLLYQMLXGI 139
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------------ 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 185 ---------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 328 -AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
++E++ P P M V KY +PD DS
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------- 284
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 8 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 68 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 125
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 126 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 181
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P YVV TR+YRAPEVILG+G+ DLWSVG
Sbjct: 182 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDLWSVG 217
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ + LF + ++ ++E++ P P M V KY
Sbjct: 218 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 277
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 278 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Query: 419 HPFFT 423
HP+
Sbjct: 323 HPYIN 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 152/360 (42%), Gaps = 60/360 (16%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA 134
+ Y IG++ + RY+ L +G G G V +D + VAIK + R A
Sbjct: 2 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 61
Query: 135 --AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
A E+ VL + H IG + + + IV E + +L ++
Sbjct: 62 KRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----ME 116
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTS 173
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
F P YVV TR+YRAPEVILG+G+ DLWSVGCI+ E
Sbjct: 174 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 311 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 363
+ + LF + ++ ++E++ P P M V KY +PD
Sbjct: 212 MVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 271
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 272 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 58/352 (16%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
F + ++ Y I+ +G G +G V + VAIK + + + + + E+
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
+L+ +I + + +R Y + +V + + L+ + +S + ++ VR
Sbjct: 106 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRY 162
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLP 255
QLL + +MH ++IH DLKP N+L+ +K+ D+ + L S + YF
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM--- 219
Query: 256 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG 314
+ V+TR YRAPE++L L + DLWSVGCI E+ +
Sbjct: 220 --------------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
LF + L ++ VLG P VI+ A + +RA
Sbjct: 260 RQLFPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAY 298
Query: 375 WKLLRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ L + + D + LL +LR++P+ R+ A ALRHPF +
Sbjct: 299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 64/349 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+ + Y + I +VF+ L L N F + ++ + + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFG 170
Query: 267 -----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + +
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWK 376
Q + LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 231 QGNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR 285
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 ------------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 64/349 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+ + Y + I +VF+ L L N F + ++ + + LL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 136
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 137 LYYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFG 169
Query: 267 -----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + +
Sbjct: 170 LARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWK 376
Q + LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 230 QGNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR 284
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 285 ------------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 64/349 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+ + Y + I +VF+ L L N F + ++ + + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFG 170
Query: 267 -----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + +
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWK 376
Q + LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 231 QGNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR 285
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 ------------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P+ V TR+YRAPEVILG+G+ DLWSVG
Sbjct: 177 --GTSFMMEPE----------------------VVTRYYRAPEVILGMGYKENVDLWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ + LF + ++ ++E++ P P M V KY
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 137/351 (39%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V FD VA+K + R A + A ++
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA---------KRAYRELV 73
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L + + + + L
Sbjct: 74 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERMSYL 129
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ +S + F P
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTP---- 182
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ EL G +FQ
Sbjct: 183 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMR 372
++++ + LG + Y G + +PD +S R
Sbjct: 225 GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESER 284
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
K DLL +L DP +R+ EALRHP+ T
Sbjct: 285 DKIK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 57/343 (16%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLARHD 149
RY+ L +G G G V +D VAIK + R A A E+ VL + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYREL-VLMKXVNHK 83
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
I + + + +V E + +L ++ + + L Q+L +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMSYLLYQMLCGI 139
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------------ 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 185 ---------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 328 -AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
++E++ P P M V KY +PD DS
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------- 284
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 64/349 (18%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+ + Y + I +VF+ L L N F + ++ + + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFG 170
Query: 267 -----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + +
Sbjct: 171 LARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWK 376
Q + LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 231 QGNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR 285
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 ------------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 113
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 169
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 222
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 223 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 322
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 323 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 151/343 (44%), Gaps = 91/343 (26%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
+I ++ +F+ + + +V E G L+D + R +D R + RQ+L
Sbjct: 84 DHPNI-----XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+ + H+ +++H DLKPEN+LL S SKD + I++ID
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIID 172
Query: 265 FG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
FG ST FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 173 FGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---- 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLR 379
+GA D ++ V K
Sbjct: 228 ----------------------------------------NGANEYDILKKVEKGKYTFE 247
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
LP + V SA DLI + L Y P+ R+ AR+AL H +
Sbjct: 248 LPQ--WKKVSESAKDLI---RKXLTYVPSXRISARDALDHEWI 285
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 69
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 125
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 178
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 278
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 279 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 113
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 169
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 222
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 223 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 322
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 323 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 69
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 125
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 178
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 278
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 279 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 76
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 132
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 185
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 186 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 285
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 286 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 74
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 75 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 130
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 183
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 184 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 226 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 283
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 284 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 75
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 131
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 184
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 284
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 68
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 124
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 177
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 178 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 278 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 76
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 132
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 185
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 186 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 285
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 286 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
R + Y IG++ + RY+ L +G G G V +D + VAIK + R
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
A A E+ VL + H IG + + + IV E + +L ++
Sbjct: 63 NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G+ F P+ V TR+YRAPEVILG+G+ D+WSVG
Sbjct: 177 --GTSFMMEPE----------------------VVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
CI+ E+ + LF + ++ ++E++ P P M V KY
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
+PD DS +H A DLL +L D ++R+ EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
HP+
Sbjct: 318 HPYIN 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 144/351 (41%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V +D VAIK + R A + A ++
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA---------KRAYRELV 75
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L ++ + + L
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYL 131
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP---- 184
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 -----------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 320 THENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS-- 284
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 65/345 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y+++ K+G G + +V E + E VA+KI++ + K + EI +L+ L GG
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKK--KKIKREIKILENLR----GGP 92
Query: 154 RCVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
+ + + +VFE + + DF K Y++ +R ++L+++ + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+ ++H D+KP N+L + E+ K ++LID+G F
Sbjct: 149 SMGIMHRDVKPHNVL-IDHEHRK-------------------------LRLIDWGLAEFY 182
Query: 272 H--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHL 327
H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 328 AMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
+ +VLG + I D R R +R W S +
Sbjct: 243 VRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN------------- 289
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
QH+ + + +D L LLRYD RL AREA+ HP+F V+
Sbjct: 290 ---QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 140/351 (39%), Gaps = 73/351 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG 151
RY+ L +G G G V FD VA+K + R A + A ++
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA---------KRAYRELV 75
Query: 152 GTRCVQIRNWFDYRN------------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+CV +N N + +V E + +L + + + + L
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERMSYL 131
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA-------------- 176
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
+F T + V TR+YRAPEVILG+G+ D+WSVGCI+ EL G +FQ
Sbjct: 177 --CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQ 226
Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMR 372
++++ + LG + Y G + + +PD +S R
Sbjct: 227 GTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESER 286
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
K DLL +L DP +R+ EALRHP+ T
Sbjct: 287 DKIK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 166/368 (45%), Gaps = 50/368 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHD 149
Y I +G G++G V +D ++ VAIK V R + I EI +L RL
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV-- 207
I + I + + + IV E L + PI L E + +L ++
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLL 140
Query: 208 --AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKL 262
F+HE +IH DLKP N LL VKV D+ L+R S KD + +L ++
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFG-LARTINSEKDTNIVNDLEENEEPGP 199
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQT 320
+ + Q S+VV TR YRAPE+IL L NY D+WS GCI EL + + Q+
Sbjct: 200 ---HNKNLKKQLTSHVV-TRWYRAPELIL-LQENYTKSIDIWSTGCIFAELLN---MLQS 251
Query: 321 HENLEHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPD------GATSRDSMR- 372
H N R L P + DR ++K + R D + G + D ++
Sbjct: 252 HIN----DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR-DQLNIIFNIIGTPTEDDLKN 306
Query: 373 ----AVWKLLRL-----PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
V K ++L P + Q + D I+LL+ +L+++P +R+ +AL HP+
Sbjct: 307 INKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL- 365
Query: 424 RDVRRPTL 431
+DVR+ L
Sbjct: 366 KDVRKKKL 373
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 38/254 (14%)
Query: 81 HYVFAIGENLTPRYRILSK---MGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAM 136
H + + + +SK +G G FGQV +C + +A KI+++ K +E
Sbjct: 75 HRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK 134
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
EI V+ +L ++ +Q+ + F+ +N I +V E + G L+D + SY +D
Sbjct: 135 NEISVMNQLDHANL-----IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFKN 253
+ + +Q+ E + MH++ ++H DLKPENIL V+ A+ +K+ D+ L+R K K
Sbjct: 190 ILFM-KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG-LARRYKPREKLK- 246
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
++FG T + APEV+ ++P D+WSVG I L S
Sbjct: 247 ---------VNFG--------------TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
Query: 314 GEALFQTHENLEHL 327
G + F + E L
Sbjct: 284 GLSPFLGDNDAETL 297
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 300
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTVVK 328
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 57/263 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFF 422
LLRYD RL AREA+ HP+F
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 300
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTVVK 328
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 149/356 (41%), Gaps = 70/356 (19%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRL 145
G +L RY L +G G G V DN+ + VAIK IV + + + A+ EI +++RL
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 146 ARHDI---------GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
+I G++ N + IV E + L + L + +
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE---EHA 122
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
R QLL + ++H ++H DLKP N+ + + + V
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV----------------------- 159
Query: 257 SSAIKLIDFG-----STTFEHQDH-SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILV 309
+K+ DFG + H+ H S + T+ YR+P ++L + D+W+ GCI
Sbjct: 160 ---LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 369
E+ +G+ LF LE M+ +L +P V+ + R E + R+
Sbjct: 217 EMLTGKTLFAGAHELEQ---MQLILESIP---VVHEEDRQELLSVIPVYI--------RN 262
Query: 370 SMRAVWKLLR--LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
M K L LP + + + +D L+ +L + P +RL A EAL HP+ +
Sbjct: 263 DMTEPHKPLTQLLPGI--------SREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 108 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 162
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 163 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 258 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 299
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYFYTVVK 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 115 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 169
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 170 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 264
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 265 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 306
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
LLRYD RL AREA+ HP+F V+
Sbjct: 307 DKLLRYDHQSRLTAREAMEHPYFYTVVK 334
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 57/263 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y++ +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFF 422
LLRYD RL AREA+ HP+F
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 145/345 (42%), Gaps = 87/345 (25%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
+ L+ RY+ + K+G G +G+V+ C D AIKI++ + A + E+ VL+
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 144 RLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGR 201
+L +I +++ +F D RN+ ++ G L+D + + + ++ +
Sbjct: 77 QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---K 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+L ++H+ ++H DLKPEN+LL S S+D + IK
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLES--------------KSRD----------ALIK 164
Query: 262 LIDFG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
++DFG S FE + T +Y APEV L ++ CD+WS G IL L G F
Sbjct: 165 IVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG 223
Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
+ E L +E+ G D PD D + + KL
Sbjct: 224 GQTDQEILKRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL-- 259
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+L Y+P++R+ A EAL HP+ +
Sbjct: 260 ----------------------MLTYEPSKRISAEEALNHPWIVK 282
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 146/364 (40%), Gaps = 91/364 (25%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA- 134
G ++ + L Y + +G G G+V F+ + + VAIKI+ +I REA
Sbjct: 4 GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 135 ----AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
EI++L++L I ++I+N+FD ++ ++ G L+D + N +
Sbjct: 64 PALNVETEIEILKKLNHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KR 116
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
+ Q+L +V ++HE +IH DLKPEN+LL S E
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------- 157
Query: 251 FKNLPKSSAIKLIDFGSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVG 305
+ IK+ DFG + E + T Y APEV++ + G+N D WS+G
Sbjct: 158 -----EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 365
IL SG F H + ++ + KY
Sbjct: 213 VILFICLSGYPPFSEHRT----------------QVSLKDQITSGKY------------- 243
Query: 366 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-R 424
+ + VW V A +DL++ LL DP R EALRHP+
Sbjct: 244 ---NFIPEVW----------AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDE 287
Query: 425 DVRR 428
D++R
Sbjct: 288 DMKR 291
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 73 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY + + VW
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 73 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY + + VW
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 12 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 72 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 124
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 160
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 161 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY + + VW
Sbjct: 221 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 243
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 244 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 73 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY + + VW
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + + LR+ + +R ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
E+ K ++LID+G F H Q+++ V++R+++
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
I D R R +R W S + QH+ + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFF 422
LLRYD RL AREA+ HP+F
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 148/362 (40%), Gaps = 94/362 (25%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
L+ RY+ + K+G G +G+V+ C D AIKI++ + A + E+ VL++L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 146 ARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQL 203
+I +++ +F D RN+ ++ G L+D + + + ++ +Q+
Sbjct: 62 DHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQV 113
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
L ++H+ ++H DLKPEN+LL S + + IK++
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIV 149
Query: 264 DFG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
DFG S FE + T +Y APEV L ++ CD+WS G IL L G F
Sbjct: 150 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQ 208
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
+ E L +E+ G D PD D + + KL
Sbjct: 209 TDQEILKRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL---- 242
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR-------DVRRPTLLVA 434
+L Y+P++R+ A EAL HP+ + DV + L A
Sbjct: 243 --------------------MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGA 282
Query: 435 TG 436
G
Sbjct: 283 LG 284
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 137/338 (40%), Gaps = 85/338 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDI 150
Y IL ++G G FG V C + + K + + ++KY EI ++ +L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHH--- 107
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
+ + + + F+ + + ++ E L G L+D + Y+ +++ + RQ E +
Sbjct: 108 --PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKH 164
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
MHE ++H D+KPENI+ + K+S++K+IDFG T
Sbjct: 165 MHEHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLAT 199
Query: 270 FEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ D +T + APE++ + D+W++G + L SG + F ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
++R DW D+ +V
Sbjct: 260 QNVKRC--------------------------DW---EFDEDAFSSV------------- 277
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
+ + D ++ LL+ +P +RL +AL HP+ D
Sbjct: 278 ----SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
+ I D + E R +R W L+ N QH+ +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 128 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 174 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLG-- 335
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 336 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
+ I D + E R +R W L+ N QH+ +
Sbjct: 268 GLNAYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 309
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 310 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
+ I D + E R +R W L+ N QH+ +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 109 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 155 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
+ I D + E R +R W L+ N QH+ +
Sbjct: 249 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 290
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 291 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
F+Y N+ F+ L P+L D+ +R +LL+++ + H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 337
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 338 PHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
++ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAI+I+ +I REA EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 198 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 250
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 286
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY
Sbjct: 347 HRT----------------QVSLKDQITSGKY---------------------------- 362
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
N I + + +DL++ LL DP R EALRHP+ D++R
Sbjct: 363 -NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 92/349 (26%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAI+I+ +I REA EI++L++L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
I ++I+N+FD ++ ++ G L+D + N + + Q+L
Sbjct: 212 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 264
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE +IH DLKPEN+LL S E + IK+ DF
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 300
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
G + E + T Y APEV++ + G+N D WS+G IL SG F
Sbjct: 301 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
H + ++ + KY
Sbjct: 361 HRT----------------QVSLKDQITSGKY---------------------------- 376
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
N I + + +DL++ LL DP R EALRHP+ D++R
Sbjct: 377 -NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 88/343 (25%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+ L+ + + S++G G V C ++ A+K+++ ++ EI VL RL+
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSH 107
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSF--PIDLVRELGRQLL 204
+I ++++ F+ I +V E + G L+D + + Y S D V+ Q+L
Sbjct: 108 PNI-----IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QIL 158
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
E+VA++HE ++H DLKPEN+L + PD + +K+ D
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATP----APD--------------------APLKIAD 194
Query: 265 FG-STTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTH 321
FG S EHQ V T Y APE++ G + D+WSVG I + LC E +
Sbjct: 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY--- 251
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRL 380
D R +++ FRR ++
Sbjct: 252 ------------------------DERGDQFMFRRILNCEY------------------- 268
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
I D + + DL++ L+ DP +RL +AL+HP+ T
Sbjct: 269 -YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 141/355 (39%), Gaps = 90/355 (25%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I V++ + F Y N++ I+ E D + R ++ + +Q
Sbjct: 89 ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L+++ ++H+ ++IH DLK NIL + DG IKL
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKL 176
Query: 263 IDFGST---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSG 314
DFG + T Q + T ++ APEV++ ++Y D+WS+G L+E+
Sbjct: 177 ADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
E PHH + + MR +
Sbjct: 237 EP---------------------PHHEL--------------------------NPMRVL 249
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
K+ + + + + D L+ L + R + L+HPF T D +P
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 141/355 (39%), Gaps = 90/355 (25%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I V++ + F Y N++ I+ E D + R ++ + +Q
Sbjct: 89 ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L+++ ++H+ ++IH DLK NIL + DG IKL
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKL 176
Query: 263 IDFGST---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSG 314
DFG + T Q + T ++ APEV++ ++Y D+WS+G L+E+
Sbjct: 177 ADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
E PHH + + MR +
Sbjct: 237 EP---------------------PHHEL--------------------------NPMRVL 249
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
K+ + + + + D L+ L + R + L+HPF T D +P
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 141/355 (39%), Gaps = 90/355 (25%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I V++ + F Y N++ I+ E D + R ++ + +Q
Sbjct: 89 ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L+++ ++H+ ++IH DLK NIL + DG IKL
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKL 176
Query: 263 IDFGST---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSG 314
DFG + T Q + T ++ APEV++ ++Y D+WS+G L+E+
Sbjct: 177 ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
E PHH + + MR +
Sbjct: 237 EP---------------------PHHEL--------------------------NPMRVL 249
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
K+ + + + + D L+ L + R + L+HPF T D +P
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
+++ + ++ I +V E G L+D++ + S R +Q++ +V +
Sbjct: 68 --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H +++H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------- 165
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 166 -------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
+++ + ++ I +V E G L+D++ + S R +Q++ +V +
Sbjct: 64 --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H +++H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------- 161
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 162 -------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 73
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
+++ + ++ I +V E G L+D++ + S R +Q++ +V +
Sbjct: 74 --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 129
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H +++H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------- 171
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 172 -------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 72
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
+++ + ++ I +V E G L+D++ + S R +Q++ +V +
Sbjct: 73 --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 128
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H +++H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------- 170
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 171 -------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 155/379 (40%), Gaps = 71/379 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHDI 150
Y I +G G++G V +D + VAIK V R + I EI +L RL I
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL----VRELGRQLLES 206
+ I + + IV E L + PI L V+ + LL
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLLG 143
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLI 263
F+HE +IH DLKP N LL VK+ D+ L+R S KD +L + +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFG-LARTINSDKDIHIVNDLEEKEENEEP 202
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS-------- 313
+ + Q S+VV TR YRAPE+IL L NY D+WS GCI EL +
Sbjct: 203 GPHNKNLKKQLTSHVV-TRWYRAPELIL-LQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 314 ---------GEALF---------QTHE--NLEHLAMMERVLGPLPHH-MVIRADRRAEKY 352
G + F + HE N + L ++ V+G P + + KY
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 353 FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK 412
+ D D + S+ + + IDLL+ +LR++ +R+
Sbjct: 321 IKLFPTRDGIDLSKKYSSI--------------------SKEGIDLLESMLRFNAQKRIT 360
Query: 413 AREALRHPFFTRDVRRPTL 431
+AL HP+ +DVR+ L
Sbjct: 361 IDKALSHPYL-KDVRKENL 378
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 49/259 (18%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
+VFE + + DF K Y+ +R +LL+++ + H ++H D+KP N+++
Sbjct: 116 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
+ ++LID+G F H Q+++ V++R+++
Sbjct: 172 H--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIR 344
PE+++ ++Y D+WS+GC+L + E F +N + L + +VLG + ++
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLK 265
Query: 345 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLL 403
+ LD R W+ N I H + +DLL LL
Sbjct: 266 ---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEALDLLDKLL 311
Query: 404 RYDPAERLKAREALRHPFF 422
RYD +RL A+EA+ HP+F
Sbjct: 312 RYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 63/339 (18%)
Query: 94 YRILSKMGEGTFGQVVECFD---NEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
Y+++ K+G G + +V E + NE+ + +K V+ RE ++E +
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILE---------NLR 90
Query: 151 GGTRCVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
GGT +++ + +VFE + + DF K Y+ +R +LL+++
Sbjct: 91 GGTNIIKLIDTVKDPVSKTPALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALD 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+ H ++H D+KP N+++ + ++LID+G
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDH--------------------------QQKKLRLIDWGLA 180
Query: 269 TFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENL 324
F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L + E F +N
Sbjct: 181 EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNY 240
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ L + +VLG + ++ + LD R W+ N I
Sbjct: 241 DQLVRIAKVLGTEELYGYLK---------KYHIDLDPHFNDILGQHSRKRWE-----NFI 286
Query: 385 MQHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFF 422
H + +DLL LLRYD +RL A+EA+ HP+F
Sbjct: 287 HSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 143/364 (39%), Gaps = 98/364 (26%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
H EN P+ +G G V C + A+KI+ +
Sbjct: 9 SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
+ REA + E+D+L++++ H +Q+++ ++ +VF+ + L+D+L +
Sbjct: 65 ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
+ R++ R LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----- 173
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLW 302
+D G E V T Y APE+I + N+P D+W
Sbjct: 174 --------------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
S G I+ L +G F + + L M+ ++ G+ +W
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWD 254
Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
D + D+++ DL+ L P +R A EAL HPFF
Sbjct: 255 DYS---DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 423 TRDV 426
+ V
Sbjct: 288 QQYV 291
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 66 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 156 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 375 W 375
W
Sbjct: 273 W 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 66 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 156 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 375 W 375
W
Sbjct: 273 W 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 131/338 (38%), Gaps = 82/338 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
Y + +G+G F V C + E + A+KIV + K+ + + + L+R A H +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
V++ + + +VFE + G L + K + F + RQ+LE++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+ H+ +IH D+KPEN+LL S E S+ +KL DFG
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-V 179
Query: 269 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
G LP + G R + ++
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 141/354 (39%), Gaps = 98/354 (27%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
EN P+ +G G V C + A+KI+ + + REA +
Sbjct: 4 ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLV 196
E+D+L++++ H +Q+++ ++ +VF+ + L+D+L + +
Sbjct: 60 EVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKET 113
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
R++ R LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------- 160
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCILVE 310
+D G E V T Y APE+I + N+P D+WS G I+
Sbjct: 161 ------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
L +G F + + L M+ ++ G+ +W D + D+
Sbjct: 209 LLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS---DT 246
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
++ DL+ L P +R A EAL HPFF +
Sbjct: 247 VK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 143/364 (39%), Gaps = 98/364 (26%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
H EN P+ +G G V C + A+KI+ +
Sbjct: 9 SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
+ REA + E+D+L++++ H +Q+++ ++ +VF+ + L+D+L +
Sbjct: 65 ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
+ R++ R LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----- 173
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLW 302
+D G + V T Y APE+I + N+P D+W
Sbjct: 174 --------------LDPG------EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
S G I+ L +G F + + L M+ ++ G+ +W
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWD 254
Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
D + D+++ DL+ L P +R A EAL HPFF
Sbjct: 255 DYS---DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 423 TRDV 426
+ V
Sbjct: 288 QQYV 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
EN+ Y ++G G F V +C + A K ++ RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
+L+ + ++ + + ++ + + ++ E + G L+DFL + S + E
Sbjct: 67 ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
IK+IDFG H+ + + T + APE++ D+WS+G I L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
+ F E LA + V A+ + RR D T +DS++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
W
Sbjct: 274 W 274
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
P +V+ L Q+L+ + ++H ++H DLKP NIL++
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------ 165
Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLW 302
P+ +K+ D G + D VV T YRAPE++LG + D+W
Sbjct: 166 -----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 303 SVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 356
++GCI EL + E +F + N H ++R+ M AD+ E +
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV----MGFPADKDWEDIKKM- 275
Query: 357 ARLDWPDGAT-SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
P+ +T +D R + L + +H LLQ LL DP +R+ + +
Sbjct: 276 -----PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 416 ALRHPFFTRD 425
A++ P+F D
Sbjct: 331 AMQDPYFLED 340
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ +L K+GEG++G V + E ++VAIK V + +E + EI ++Q+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-IKEISIMQQC-----DSP 84
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
V+ + + IV E G S+ D +R + ++ D + + + L+ + ++H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+R IH D+K NILL + + K+ D+ G T
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXM 179
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
+ V+ T + APEVI +G+N D+WS+G +E+ G+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 127/306 (41%), Gaps = 60/306 (19%)
Query: 51 GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRI-------LSKMGEG 103
G+ A + M + R+GSP ++ A P++R+ L +G+G
Sbjct: 109 GLKKQAAAEMDF----RSGSPSDNSGAEEMEVSLA-----KPKHRVTMNEFEYLKLLGKG 159
Query: 104 TFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRCVQIR 159
TFG+V+ + A+KI++ I E A + E VLQ +RH ++
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF----LTALK 214
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIH 217
F + +C V E G L+ L + R F D R G +++ ++ ++H E +++
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
DLK EN++L ++K+ D+ KDG+ K
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF----------------------- 309
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME---- 331
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 310 -CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 332 -RVLGP 336
R LGP
Sbjct: 369 PRTLGP 374
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
H++ + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 43/226 (19%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMIEIDVLQRLARHDIGGT 153
K+G G FG V E++ +++++INK R E EI+VL+ L +I
Sbjct: 29 KLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI--- 82
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFM 210
++I F+ +++ IV E G L + + R + V EL +Q++ ++A+
Sbjct: 83 --IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 269
H ++H DLKPENIL F++ S IK+IDFG +
Sbjct: 141 HSQHVVHKDLKPENIL------------------------FQDTSPHSPIKIIDFGLAEL 176
Query: 270 FEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
F+ +HS T Y APEV + CD+WS G ++ L +G
Sbjct: 177 FKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
H++ + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V + A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
H++ + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V + A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 132/359 (36%), Gaps = 93/359 (25%)
Query: 81 HYVFAIGENLTPR------------YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
+YVF I + P+ Y I ++G G FG V + A K V +
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 129 NKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
++ +E EI + L RH V + + F+ N + +++E + G L++ + +
Sbjct: 194 HESDKETVRKEIQTMSVL-RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-AD 247
Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
+ D E RQ+ + + MHE +H DLKPENI+ +
Sbjct: 248 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------------- 291
Query: 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSV 304
+S+ +KLIDFG T S V+ T + APEV G Y D+WSV
Sbjct: 292 ---------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342
Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
G + L SG + F + E L R DW
Sbjct: 343 GVLSYILLSGLSPFGGENDDETL--------------------------RNVKSCDW--- 373
Query: 365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
N+ + D D ++ LL DP R+ +AL HP+ T
Sbjct: 374 -----------------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 132/359 (36%), Gaps = 93/359 (25%)
Query: 81 HYVFAIGENLTPR------------YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
+YVF I + P+ Y I ++G G FG V + A K V +
Sbjct: 28 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 129 NKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
++ +E EI + L RH V + + F+ N + +++E + G L++ + +
Sbjct: 88 HESDKETVRKEIQTMSVL-RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-AD 141
Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
+ D E RQ+ + + MHE +H DLKPENI+ +
Sbjct: 142 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------------- 185
Query: 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSV 304
+S+ +KLIDFG T S V+ T + APEV G Y D+WSV
Sbjct: 186 ---------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 236
Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
G + L SG + F + E L R DW
Sbjct: 237 GVLSYILLSGLSPFGGENDDETL--------------------------RNVKSCDW--- 267
Query: 365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
N+ + D D ++ LL DP R+ +AL HP+ T
Sbjct: 268 -----------------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 52/297 (17%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
G +R +D + HY +GE L G G F V +C + A K ++
Sbjct: 1 GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 129 -------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180
RE E+++L+ + RH + + + F+ + + ++ E + G L+
Sbjct: 49 RLSSSRRGVSREEIEREVNILREI-RH----PNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
DFL + S D + +Q+L+ V ++H R+ H DLKPENI+L+
Sbjct: 104 DFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD----------- 150
Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYP 298
KN+P + IKLIDFG + + + T + APE++
Sbjct: 151 -----------KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 299 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
D+WS+G I L SG + F E L + V A+ + RR
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
H++ + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
H++ + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 88/348 (25%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
+ +I V + + ++ H+ ++ + + G L+D + + + + R+ R
Sbjct: 73 IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L++V ++H+L ++H DLKPEN+L + +L + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLL------------------------YYSLDEDSKI 158
Query: 261 KLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
+ DFG + E S T Y APEV+ ++ D WS+G I L G F
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
+ + + E++L +AE F D D A
Sbjct: 219 YDENDAK---LFEQIL-------------KAEYEFDSPYWDDISDSAK------------ 250
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 ------------------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 88
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 89 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 146 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 181
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 182 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 241
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 242 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 265
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 266 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 136/342 (39%), Gaps = 58/342 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----------EIDVL 142
Y + + G++G V D+E + ++ +++ R ++ EI +L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I G R + + + + +V E + L + P ++
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-QHIQYFMYH 142
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + +HE ++H DL P NILL + + D+ + D
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------- 188
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH 321
+ ++ V+ R YRAPE+++ G+ D+WS GC++ E+ + +ALF+
Sbjct: 189 -----------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 322 ENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
L + V+G P +V+ + A Y R + S RA W
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR---------NSLSNVPARA-W----- 282
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
++ D A +DL+ +L ++P R+ +ALRHP+F
Sbjct: 283 -TAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 136/342 (39%), Gaps = 58/342 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----------EIDVL 142
Y + + G++G V D+E + ++ +++ R ++ EI +L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I G R + + + + +V E + L + P ++
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-QHIQYFMYH 142
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
+L + +HE ++H DL P NILL + + D+ + D
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------- 188
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH 321
+ ++ V+ R YRAPE+++ G+ D+WS GC++ E+ + +ALF+
Sbjct: 189 -----------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 322 ENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
L + V+G P +V+ + A Y R + S RA W
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR---------NSLSNVPARA-W----- 282
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
++ D A +DL+ +L ++P R+ +ALRHP+F
Sbjct: 283 -TAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 79
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 80 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 137 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 172
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 173 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 232
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 233 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 256
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 257 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 88/348 (25%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
+ +I V + + ++ H+ ++ + + G L+D + + + + R+ R
Sbjct: 73 IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L++V ++H+L ++H DLKPEN+L + +L + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLL------------------------YYSLDEDSKI 158
Query: 261 KLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
+ DFG + E S T Y APEV+ ++ D WS+G I L G F
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
+ + + E++L +AE F D D A
Sbjct: 219 YDENDAK---LFEQIL-------------KAEYEFDSPYWDDISDSAK------------ 250
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 ------------------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 44/256 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
++ F + +C V E G L+ L + R F D R G +++ ++
Sbjct: 71 F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 124
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++H E +++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------- 171
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 325
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 172 -----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 220
Query: 326 HLAMME-----RVLGP 336
L +ME R LGP
Sbjct: 221 ELILMEEIRFPRTLGP 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 44/256 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 211
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
++ F + +C V E G L+ L + R F D R G +++ ++
Sbjct: 212 F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 265
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++H E +++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------- 312
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 325
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 313 -----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 361
Query: 326 HLAMME-----RVLGP 336
L +ME R LGP
Sbjct: 362 ELILMEEIRFPRTLGP 377
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 44/256 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
++ F + +C V E G L+ L + R F D R G +++ ++
Sbjct: 70 F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 123
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++H E +++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------- 170
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 325
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 171 -----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 219
Query: 326 HLAMME-----RVLGP 336
L +ME R LGP
Sbjct: 220 ELILMEEIRFPRTLGP 235
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 80
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 81 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 138 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 173
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 174 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 233
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 234 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 257
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 258 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 73
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 74 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 131 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 167 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 226
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 227 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 250
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 251 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 72
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 73 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 130 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 166 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 225
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 226 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 249
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 250 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 78
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 79 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 136 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 172 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 231
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 232 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 255
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 256 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 44/256 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
++ F + +C V E G L+ L + R F D R G +++ ++
Sbjct: 69 F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 122
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++H E +++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------- 169
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 325
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 170 -----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 218
Query: 326 HLAMME-----RVLGP 336
L +ME R LGP
Sbjct: 219 ELILMEEIRFPRTLGP 234
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 124
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 125 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 182 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 217
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 218 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 277
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 278 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 301
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 302 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
H+V A E P + +L +G+G+FG+V + + L A+K+++ + R
Sbjct: 16 HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
+E D+L D+ V++ F + ++ + L G L+ L K F
Sbjct: 76 RTKMERDILA-----DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 128
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
+ V+ +L + +H L +I+ DLKPENILL ++K+ D+ LS+ + D
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKEAID----- 182
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
H+ +Y T Y APEV+ G ++ D WS G ++ E+
Sbjct: 183 -------------------HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL-DWPDGA 365
+G FQ + E + ++ + +P + A F+R RL PDGA
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 88/348 (25%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
+ +I V + + ++ H+ ++ + + G L+D + + + + R+ R
Sbjct: 73 IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L++V ++H+L ++H DLKPEN+L + +L + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLL------------------------YYSLDEDSKI 158
Query: 261 KLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
+ DFG + E S T Y APEV+ ++ D WS+G I L G F
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
+ + + E++L +AE F D D A
Sbjct: 219 YDENDAK---LFEQIL-------------KAEYEFDSPYWDDISDSAK------------ 250
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 ------------------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 143/350 (40%), Gaps = 92/350 (26%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
+ +I V + + ++ H+ ++ + + G L+D + + + + R+ R
Sbjct: 73 IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+L++V ++H+L ++H DLKPEN+L + +L + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLL------------------------YYSLDEDSKI 158
Query: 261 KLIDFGSTTFEHQDHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
+ DFG + E D V+ST Y APEV+ ++ D WS+G I L G
Sbjct: 159 MISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
F + + + E++L +AE F D D A
Sbjct: 217 PFYDENDAK---LFEQIL-------------KAEYEFDSPYWDDISDSAK---------- 250
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 --------------------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 75 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 132 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 167
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 227
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 228 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 251
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 252 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 92/363 (25%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--R 126
S W+ +D +F E L G G F +VV + +L A+K + +
Sbjct: 9 SSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKK 58
Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
++ + EI VL+++ +I V + + ++ NH+ +V + + G L+D + +
Sbjct: 59 ALKGKESSIENEIAVLRKIKHENI-----VALEDIYESPNHLYLVMQLVSGGELFDRIVE 113
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
+ + L RQ+L++V ++H + ++H DLKPEN+L S +
Sbjct: 114 KGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD-------------- 157
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWS 303
+ S I + DFG + E + S T Y APEV+ ++ D WS
Sbjct: 158 ----------EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 207
Query: 304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
+G I L G F + + + E++L +AE F D D
Sbjct: 208 IGVIAYILLCGYPPFYDENDSK---LFEQIL-------------KAEYEFDSPYWDDISD 251
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
A D ++ L+ DP +R +A RHP+
Sbjct: 252 SAK------------------------------DFIRNLMEKDPNKRYTCEQAARHPWIA 281
Query: 424 RDV 426
D
Sbjct: 282 GDT 284
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 118
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 119 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 176 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 211
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 272 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 295
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 296 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 75 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 132 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 167
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 227
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 228 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 251
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 252 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 82/344 (23%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 72
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 73 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 130 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLE 325
T H + T +Y APEV+ ++ CD+WS+G I+ + LC + H
Sbjct: 166 KETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 225
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
M R+ R + ++P+ S S
Sbjct: 226 SPGMKTRI---------------------RMGQYEFPNPEWSEVS--------------- 249
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 250 -------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDV 141
+G N +RI K+G G F +V VA+K V+ + K R + EID+
Sbjct: 26 MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLV 196
L++L ++ ++ F N + IV E L + F K R P V
Sbjct: 86 LKQLNHPNV-----IKYYASFIEDNELNIVLELADAGDLSRMIKHF--KKQKRLIPERTV 138
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
+ QL ++ MH R++H D+KP N+ + + VK+ D G +F +
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--- 188
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
TT H +V T +Y +PE I G+N+ D+WS+GC+L E+ + ++
Sbjct: 189 ----------KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 317 LF 318
F
Sbjct: 235 PF 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 134/343 (39%), Gaps = 80/343 (23%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G G+V+ECF + A+K++ K R+ E+D + + GG V I
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 69
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ ++ +H + I+ E + G L+ +++ ++F E+ R + ++ F+H
Sbjct: 70 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+ H D+KPEN+L S E K + +KL DFG Q+
Sbjct: 130 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQN 165
Query: 275 HSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
T +Y APEV+ ++ CD+WS+G I+ L G F ++ M+R
Sbjct: 166 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 225
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
+ R +Y PN V A
Sbjct: 226 I-------------RLGQY--------------------------GFPNPEWSEVSEDAK 246
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
LI L LL+ DP ERL + + HP+ + + P + T
Sbjct: 247 QLIRL---LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 49/313 (15%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------------- 126
G YV + Y + K+G G +G+V+ C + AIK+++
Sbjct: 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 127 -SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR 184
+I K+ E EI +L+ L +I +++ + F+ + + +V E G L++ +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
N ++ D + +Q+L + ++H+ ++H D+KPENILL
Sbjct: 139 -NRHKFDECDAAN-IMKQILSGICYLHKHNIVHRDIKPENILL----------------- 179
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLW 302
+N IK++DFG ++F +D+ + T +Y APEV L +N CD+W
Sbjct: 180 -------ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVW 231
Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
S G I+ L G F + + + +E+ + A++ + D+
Sbjct: 232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYN 291
Query: 363 DGATSRDSMRAVW 375
T+ +++ + W
Sbjct: 292 KRCTAEEALNSRW 304
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 122/301 (40%), Gaps = 41/301 (13%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLA 146
Y + ++G G F V +C + A K ++ RE E+++L+ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+I + + + F+ + + ++ E + G L+DFL + S D + +Q+L+
Sbjct: 67 HPNI-----ITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILD 119
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
V ++H R+ H DLKPENI+L+ KN+P + IKLIDF
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 156
Query: 266 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
G + + + T + APE++ D+WS+G I L SG + F
Sbjct: 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 216
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW-KLLRLPN 382
E L + V A+ + RR D T S+ W K +R N
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276
Query: 383 L 383
+
Sbjct: 277 V 277
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 80/336 (23%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G G+V+ECF + A+K++ K R+ E+D + + GG V I
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 88
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ ++ +H + I+ E + G L+ +++ ++F E+ R + ++ F+H
Sbjct: 89 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+ H D+KPEN+L S E K + +KL DFG Q+
Sbjct: 149 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQN 184
Query: 275 HSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
T +Y APEV+ ++ CD+WS+G I+ L G F ++ M+R
Sbjct: 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
+ R +Y PN V A
Sbjct: 245 I-------------RLGQY--------------------------GFPNPEWSEVSEDAK 265
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
LI L LL+ DP ERL + + HP+ + + P
Sbjct: 266 QLIRL---LLKTDPTERLTITQFMNHPWINQSMVVP 298
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 140/356 (39%), Gaps = 93/356 (26%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+ FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 4 VTRDLNPEDFWEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
+I V++ + F Y N++ I+ E D + R ++ + +Q
Sbjct: 62 ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L+++ ++H+ ++IH DLK NIL + DG IKL
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKL 149
Query: 263 IDFG----STTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCS 313
DFG +T Q + T ++ APEV++ ++Y D+WS+G L+E+
Sbjct: 150 ADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 209
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
E PHH + + MR
Sbjct: 210 IEP---------------------PHHEL--------------------------NPMRV 222
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
+ K+ + + + + D L+ L + R + L+HPF T D +P
Sbjct: 223 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLA 146
Y + ++G G F V +C + A K ++ RE E+++L+ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+I + + + F+ + + ++ E + G L+DFL + S D + +Q+L+
Sbjct: 88 HPNI-----ITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILD 140
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
V ++H R+ H DLKPENI+L+ KN+P + IKLIDF
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 177
Query: 266 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
G + + + T + APE++ D+WS+G I L SG + F
Sbjct: 178 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 237
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
E L + V A+ + RR
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
L ++G+G+FG+V + DN KE+VAIKI+ E EI VL + I
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
G+ + W I+ E L G S D L+ I + R++L+ + ++
Sbjct: 84 GSYLKSTKLW--------IIMEYLGGGSALDLLKPGPLEETYIATIL---REILKGLDYL 132
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H R IH D+K N+LL VK+ D+ G T
Sbjct: 133 HSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTD 168
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
+ V T + APEVI +++ D+WS+G +EL GE
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 199
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 200 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 260 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 291
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 292 ---------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 331
Query: 431 LLVATGET 438
+A G T
Sbjct: 332 NQMAKGTT 339
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 66 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 152
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 212
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 213 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 244
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 245 ---------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 284
Query: 431 LLVATGET 438
+A G T
Sbjct: 285 NQMAKGTT 292
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
+Y L K+GEG+FG+ + E IK I R +K RE + E+ VL + +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I VQ R F+ + IV + G L+ + F D + + Q+ ++
Sbjct: 85 I-----VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
+H+ +++H D+K +NI L +KDG+ ++L DFG
Sbjct: 140 HVHDRKILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIA 172
Query: 267 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ--TH 321
++T E + T +Y +PE+ +N D+W++GC+L ELC+ + F+ +
Sbjct: 173 RVLNSTVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM 230
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 358
+NL L ++ P+ H + F+R R
Sbjct: 231 KNLV-LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 199
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 200 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 260 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 291
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 292 ---------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 331
Query: 431 LLVATGET 438
+A G T
Sbjct: 332 NQMAKGTT 339
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 85 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 171
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 232 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 263
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 264 ---------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 303
Query: 431 LLVATGET 438
+A G T
Sbjct: 304 NQMAKGTT 311
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 14 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 69 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 155
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 156 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 215
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 216 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 247
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 248 ---------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 287
Query: 431 LLVATGET 438
+A G T
Sbjct: 288 NQMAKGTT 295
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 143/392 (36%), Gaps = 104/392 (26%)
Query: 49 NGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQV 108
N P + F P P W A + +Y +G G V
Sbjct: 62 NDAQPKGTENLYFQSMGPEDELPDW-----------AAAKEFYQKYDPKDVIGRGVSSVV 110
Query: 109 VECFDNEKKELVAIKIVR---------SINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
C A+KI+ + + REA E +L+++A H + +
Sbjct: 111 RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH----PHIITLI 166
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
+ ++ + + +VF+ + L+D+L + + R + R LLE+V+F+H ++H
Sbjct: 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DLKPENILL +++ D+ F S + G + L
Sbjct: 225 DLKPENILLDDNMQIRLSDFGF-SCHLEPGEKLREL------------------------ 259
Query: 279 VSTRHYRAPEVI------LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
T Y APE++ G+ DLW+ G IL L +G F +
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-------- 311
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
+++R + F + +W D +++
Sbjct: 312 --------LMLRMIMEGQYQF---SSPEWDDRSST------------------------- 335
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+ DL+ LL+ DP RL A +AL+HPFF R
Sbjct: 336 --VKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 140/364 (38%), Gaps = 86/364 (23%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLT-----PRYRI--LSKMGEGTFGQVVECFDNEKKELVA 121
GS P R + H F L PR + K+GEG+ G V +LVA
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180
+K + + R + V+ R +H+ V++ N + + + +V E L G +L
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
D + + + + +L++++ +H +IH D+K ++ILL VK+ D+ F
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
++ SK+ K L V T ++ APE+I L + D
Sbjct: 174 CAQVSKEVPRRKXL------------------------VGTPYWMAPELISRLPYGPEVD 209
Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------ 245
Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
RL NL + L L LL DPA+R A E L+HP
Sbjct: 246 ------------------RLKNL-----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 282
Query: 421 FFTR 424
F +
Sbjct: 283 FLAK 286
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
L ++G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSSY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+ + + + I+ E L G S D LR + F I + +++L+ + ++H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSE 139
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+ IH D+K N+LL VK+ D+ G T
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
+ V T + APEVI ++ D+WS+G +EL GE
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 85
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 86 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 141
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 181
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 182 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
L +G+GTFG+V+ + A+KI+R E+ + + H + +R +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
Q ++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
L +ME + P
Sbjct: 214 FELILMEEIRFP 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 145/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 85 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 171
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D V V T +Y PE I + + D+WS+GCIL
Sbjct: 172 IANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 232 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 263
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 264 ---------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 303
Query: 431 LLVATGET 438
+A G T
Sbjct: 304 NQMAKGTT 311
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
L +G+GTFG+V+ + A+KI+R E+ + + H + +R +
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 62
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
Q ++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 168
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 169 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 216
Query: 325 EHLAMMERVLGP 336
L +ME + P
Sbjct: 217 FELILMEEIRFP 228
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 82 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 178 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 82 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 178 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 10 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 65 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 119
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 151
Query: 267 STTFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + V V T +Y PE I + + D+WS+GCIL
Sbjct: 152 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 211
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 212 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 243
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 244 ---------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 283
Query: 431 LLVATGET 438
+A G T
Sbjct: 284 NQMAKGTT 291
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
L +G+GTFG+V+ + A+KI+R E+ + + H + +R +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
Q ++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
L +ME + P
Sbjct: 214 FELILMEEIRFP 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 213
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
N + + + +V E L G +L D + ++ + + + +L++++ +H +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SK+ K L
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 307
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 308 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 365
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
RL NL + L
Sbjct: 366 -----------------------------------------RLKNL-----HKVSPSLKG 379
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L LL DPA+R A E L+HPF +
Sbjct: 380 FLDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ L +G+GTFG+V+ + A+KI+R E+ + + H + +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTES 56
Query: 154 RCVQ---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
R +Q ++ F + +C V E G L+ L + R F + R G ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEI 114
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------- 165
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTH 321
T Y APEV+ + D W +G ++ E+ G F Q H
Sbjct: 166 ---------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 322 ENLEHLAMMERVLGP 336
E L L +ME + P
Sbjct: 211 ERLFELILMEEIRFP 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ L +G+GTFG+V+ + A+KI+R E+ + + H + +
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTES 61
Query: 154 RCVQ---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
R +Q ++ F + +C V E G L+ L + R F + R G ++
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEI 119
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 120 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------- 170
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTH 321
T Y APEV+ + D W +G ++ E+ G F Q H
Sbjct: 171 ---------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
Query: 322 ENLEHLAMMERVLGP 336
E L L +ME + P
Sbjct: 216 ERLFELILMEEIRFP 230
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ L +G+GTFG+V+ + A+KI+R E+ + + H + +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTES 56
Query: 154 RCVQ---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
R +Q ++ F + +C V E G L+ L + R F + R G ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEI 114
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------- 165
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTH 321
T Y APEV+ + D W +G ++ E+ G F Q H
Sbjct: 166 ---------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 322 ENLEHLAMMERVLGP 336
E L L +ME + P
Sbjct: 211 ERLFELILMEEIRFP 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 136
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
N + + + +V E L G +L D + + + + +L++++ +H +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SK+ K L
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 230
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 231 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 288
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
RL NL + L
Sbjct: 289 -----------------------------------------RLKNL-----HKVSPSLKG 302
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L LL DPA+R A E L+HPF +
Sbjct: 303 FLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 145/368 (39%), Gaps = 109/368 (29%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+H + +++ ++ +I +V E L +L+K +S + + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V +H+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFG 199
Query: 267 STTFEHQDHSYVVSTR-----HYRAPEVILGLGWN-----------YPCDLWSVGCILVE 310
D + VV +Y PE I + + D+WS+GCIL
Sbjct: 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
+ G+ FQ + + ++ + ++ P +++PD
Sbjct: 260 MTYGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------- 291
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
+P DL D+L+ L+ DP +R+ E L HP+ P
Sbjct: 292 ---------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPV 331
Query: 431 LLVATGET 438
+A G T
Sbjct: 332 NQMAKGTT 339
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ + +
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y+KV D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ L +G+GTFG+V+ + A+KI+R E+ + + H + +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTES 56
Query: 154 RCVQ---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
R +Q ++ F + +C V E G L+ L + R F + R G ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEI 114
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ ++H +++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------- 165
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTH 321
T Y APEV+ + D W +G ++ E+ G F Q H
Sbjct: 166 ---------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 322 ENLEHLAMMERVLGP 336
E L L +ME + P
Sbjct: 211 ERLFELILMEEIRFP 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMIEIDVLQRLA 146
Y I ++G G F V +C + A K ++ RE E+ +L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+I + + + ++ R + ++ E + G L+DFL + S + +Q+L+
Sbjct: 74 HPNI-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI------- 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG T + APE++ D+WS+G I L SG + F
Sbjct: 179 ---FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
E LA + V + A+ + R+ + T ++++R W
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++ +A +
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 65
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
D ++ DI V++ + F + H E + DFLR DL
Sbjct: 66 KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 114
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
L ++++ E V F +H L +I+ DLKPENILL ++K+ D+ LS
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 173
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
+ S D H+ +Y T Y APEV+ G D
Sbjct: 174 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
WS G ++ E+ +G FQ + E + M+ + +P + A F+R RL
Sbjct: 210 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
Query: 360 D-WPDGA 365
PDG
Sbjct: 270 GAGPDGV 276
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 105
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 106 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 161
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 201
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 202 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 103
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 104 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 159
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 199
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 200 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ ++ V ++H R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K+L
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 91
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
N + + + +V E L G +L D + + + + +L++++ +H +IH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SK+ K L
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 185
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 186 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 243
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
RL NL + L
Sbjct: 244 -----------------------------------------RLKNL-----HKVSPSLKG 257
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L LL DPA+R A E L+HPF +
Sbjct: 258 FLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 86
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
N + + + +V E L G +L D + + + + +L++++ +H +IH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SK+ K L
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 181 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 238
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
RL NL + L
Sbjct: 239 -----------------------------------------RLKNL-----HKVSPSLKG 252
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L LL DPA+R A E L+HPF +
Sbjct: 253 FLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 36/230 (15%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-IEIDVLQRLAR 147
N+ + + +G G F +V +L A+K ++ +R++++ EI VL+++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD-FLRKNSYRSFPIDLVRELGRQLLE 205
+I V + + ++ H +V + + G L+D L + Y LV + Q+L
Sbjct: 66 ENI-----VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLS 117
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V ++HE ++H DLKPEN+L ++ E ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153
Query: 266 GSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G + E S T Y APEV+ ++ D WS+G I L G
Sbjct: 154 GLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 48 GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
GN G+ C + ++P S P +P +KD + PR ++ K+G G F
Sbjct: 157 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 201
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
G+V N K VA+K ++ + EA + E +V++ L +HD + V++ +
Sbjct: 202 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 254
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
I I+ E + SL DFL+ + P+ + + Q+ E +AF+ + IH DL+ N
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 314
Query: 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 284
IL+ ++ K+ D+ L+R +D Y IK +
Sbjct: 315 ILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------------W 351
Query: 285 RAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
APE I + D+WS G +L+E+ + G + N E + +ER
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 79
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ++ ++H R
Sbjct: 80 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 135
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 175
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 176 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 82
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
N + + + +V E L G +L D + + + + +L++++ +H +IH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SK+ K L
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 176
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
RL NL + L
Sbjct: 235 -----------------------------------------RLKNL-----HKVSPSLKG 248
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L LL DPA+R A E L+HPF +
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y+KV D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y+KV D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 90
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ ++ V ++H R
Sbjct: 91 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 146
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K+L
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-------------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 187 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G+T
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GATW------ 217
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 218 -TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++ +A +
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 65
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
D ++ DI V++ + F + H E + DFLR DL
Sbjct: 66 KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 114
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
L ++++ E V F +H L +I+ DLKPENILL ++K+ D+ LS
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 173
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
+ S D H+ +Y T Y APEV+ G D
Sbjct: 174 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
WS G ++ E+ +G FQ + E + M+ + +P + A F+R RL
Sbjct: 210 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
Query: 360 D-WPDGA 365
PDG
Sbjct: 270 GAGPDGV 276
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
+ I+ ++G+G FG+V + + E L A K++ + ++ E ++EI++L I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-- 70
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
V++ + + + I+ E D + R ++ + RQ+LE++ F+H
Sbjct: 71 ---VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R+IH DLK N+L+ +++ D+ G KNL T +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQK 165
Query: 273 QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 315
+D + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 166 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ ++ V ++H R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
+ I+ ++G+G FG+V + + E L A K++ + ++ E ++EI++L I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-- 78
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
V++ + + + I+ E D + R ++ + RQ+LE++ F+H
Sbjct: 79 ---VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R+IH DLK N+L+ +++ D+ G KNL T +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQK 173
Query: 273 QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 315
+D + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 174 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++ +A +
Sbjct: 13 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 66
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
D ++ DI V++ + F + H E + DFLR DL
Sbjct: 67 KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 115
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
L ++++ E V F +H L +I+ DLKPENILL ++K+ D+ LS
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 174
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
+ S D H+ +Y T Y APEV+ G D
Sbjct: 175 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 210
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
WS G ++ E+ +G FQ + E + M+ + +P + A F+R RL
Sbjct: 211 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 270
Query: 360 D-WPDGA 365
PDG
Sbjct: 271 GAGPDGV 277
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y+KV D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 133/342 (38%), Gaps = 83/342 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y + +G G++ + C A+K+ I+K + EI++L R +H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----P 81
Query: 154 RCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFM 210
+ +++ +D H+ +V E + G L LR+ + V +G+ +V ++
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H ++H DLKP NIL Y +++ DFG
Sbjct: 138 HSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQ 174
Query: 271 EHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN------- 227
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
GP +D E R G+ G W
Sbjct: 228 -------GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT---------- 254
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
V +A DL+ +L DP +RL A++ L+HP+ T+ + P
Sbjct: 255 VSETAKDLVS---KMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 121
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 179
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 217
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 218 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+F+ + + +V E SL + ++ + P R RQ ++ V ++H R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DLK N+ L VK+ D+ ++ DG K L
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 44/240 (18%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDV 141
+ +Y +S +G G FG V D EK + V +K ++ + +EI +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
L R+ +I +++ + F+ + +V EK G L F + + L + R
Sbjct: 83 LSRVEHANI-----IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
QL+ +V ++ +IH D+K ENI++ D+ IK
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAE-------DF--------------------TIK 170
Query: 262 LIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
LIDFGS + + + T Y APEV++G + P ++WS+G L L E F
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 133/342 (38%), Gaps = 83/342 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y + +G G++ + C A+K+ I+K + EI++L R +H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----P 81
Query: 154 RCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFM 210
+ +++ +D H+ +V E + G L LR+ + V +G+ +V ++
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H ++H DLKP NIL Y +++ DFG
Sbjct: 138 HSQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQ 174
Query: 271 EHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN------- 227
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
GP +D E R G+ G W
Sbjct: 228 -------GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT---------- 254
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
V +A DL+ +L DP +RL A++ L+HP+ T+ + P
Sbjct: 255 VSETAKDLV---SKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 93
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 189
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 190 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 38/238 (15%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K ++ K R E+++ R ++ H +
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR----EVELHWRASQCPHIV 118
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 119 ---RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 176 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 211
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
T H + T +Y APEV+ ++ CD WS+G I L G F ++ L
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145
IG+ + RY+I+ K+G G V D VAIK + + +E + L+R
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE------ETLKRF 58
Query: 146 AR--HDIGGTRCVQIRNWFDY-RNHIC--IVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
R H+ I + D C +V E + GP+L +++ S+ +D
Sbjct: 59 EREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINF 116
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+L+ + H++R++H D+KP+NIL+ S + +K+ D+ S+
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE------------- 163
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
T+ +H V+ T Y +PE G + D++S+G +L E+ GE F
Sbjct: 164 --------TSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+++ Y+KV D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
+ T Y APE+IL G+N D W++G ++ E+ +G F E ++
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 92 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 149
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVK--------------------GRTW------ 183
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 184 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 130/349 (37%), Gaps = 92/349 (26%)
Query: 85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EI 139
IGE + +++ + +G+G+F V VAIK++ Y+ A M+ E+
Sbjct: 5 CIGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEV 62
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+ +L I +++ N+F+ N++ +V E + KN + F + R
Sbjct: 63 KIHCQLKHPSI-----LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF 117
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q++ + ++H ++H DL N+LL ++
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLT---------------------------RNMN 150
Query: 260 IKLIDFGSTT---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
IK+ DFG T H+ H + T +Y +PE+ D+WS+GC+ L G
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
F T + V L + V+ AD + A+
Sbjct: 211 PFDT----------DTVKNTL--NKVVLADYEMPSFLSIEAK------------------ 240
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
DL+ LLR +PA+RL L HPF +R+
Sbjct: 241 --------------------DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 86
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 144
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 182
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 183 -----TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ S P R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+++ Y+KV D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 128/338 (37%), Gaps = 82/338 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
Y + +G+G F V C + E + A+KIV + K+ + + + L+R A H +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
V++ + + +VFE + G L + K + F + RQ+LE++
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+ H+ +IH D+KP +LL S E S+ +KL FG
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 181
Query: 269 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 182 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 230
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
G LP + G R + ++
Sbjct: 231 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 257
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 258 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 292
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 128/338 (37%), Gaps = 82/338 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
Y + +G+G F V C + E + A+KIV + K+ + + + L+R A H +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
V++ + + +VFE + G L + K + F + RQ+LE++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+ H+ +IH D+KP +LL S E S+ +KL FG
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 179
Query: 269 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
G LP + G R + ++
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+Y K+G+G G V D + VAI+ + + ++ +I ++ R ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I N+ D + + +V E L G SL D + + I V R+ L+++
Sbjct: 78 ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
F+H ++IH D+K +NILL DGS +KL DFG
Sbjct: 131 FLHSNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFC 163
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
T E S +V T ++ APEV+ + D+WS+G + +E+ GE + L
Sbjct: 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
Query: 326 HLAMM 330
L ++
Sbjct: 224 ALYLI 228
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+Y K+G+G G V D + VAI+ + + ++ +I ++ R ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I N+ D + + +V E L G SL D + + I V R+ L+++
Sbjct: 78 ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
F+H ++IH D+K +NILL DGS +KL DFG
Sbjct: 131 FLHSNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFC 163
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 164 AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
++ +G+G FGQVV+ + AIK +R + + E+ +L L +
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
W + RN + +F ++ +LYD + + + R L RQ+
Sbjct: 71 ----WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
LE+++++H +IH DLKP NI + + VK+ D+ KN+ +S I +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 312
D + + + + T Y A EV+ G G +N D++S+G I E+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+Y K+G+G G V D + VAI+ + + ++ +I ++ R ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I N+ D + + +V E L G SL D + + I V R+ L+++
Sbjct: 78 ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
F+H ++IH D+K +NILL DGS +KL DFG
Sbjct: 131 FLHSNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFC 163
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 164 AQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ + P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 49/232 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI ++K + + +I+ H +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
R +Q N+ F +++ +V E G ++ LR+ S P R Q
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------- 193
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ---GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+Y K+G+G G V D + VAI+ + + ++ +I ++ R ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I N+ D + + +V E L G SL D + + I V R+ L+++
Sbjct: 79 ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
F+H ++IH D+K +NILL DGS +KL DFG
Sbjct: 132 FLHSNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFC 164
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 165 AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ ++ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 75/344 (21%)
Query: 94 YRILSKM-GEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIG 151
Y++ S++ GEG + +V + + A+KI+ + R E++ L + G
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ----G 69
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
+++ +F+ +VFEKL G S+ ++K + F + R + ++ F+
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFL 127
Query: 211 HELRLIHTDLKPENILLVSAEY---VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
H + H DLKPENIL S E VK+ D+ S +KL +
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDL----------------GSGMKL-NNSC 170
Query: 268 TTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
T + + + Y APEV+ ++ CDLWS+G +L + SG F H
Sbjct: 171 TPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH- 229
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR--- 379
GA W G R +++ ++
Sbjct: 230 --------------------------------CGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 380 --LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
P+ H+ A DLI LL D +RL A + L+HP+
Sbjct: 258 YEFPDKDWAHISSEAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 49/232 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI ++K + + +I+ H +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
R +Q N+ F +++ +V E G ++ LR+ S P R Q
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------- 193
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ---GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
++ +G+G FGQVV+ + AIK +R + + E+ +L L +
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
W + RN + +F ++ +LYD + + + R L RQ+
Sbjct: 71 ----WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
LE+++++H +IH DLKP NI + + VK+ D+ KN+ +S I +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 312
D + + + + T Y A EV+ G G +N D++S+G I E+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 43/318 (13%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI---EI 139
AI + Y I +GEG+FG+V + ++ VA+K + R + K + M EI
Sbjct: 1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
L +L RH +++ + I +V E G L+D++ + + D R
Sbjct: 61 SYL-KLLRH----PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRF 113
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+Q++ ++ + H +++H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 114 FQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG-LSNIMTDGNFLKT------ 166
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
+ +Y APEVI G + P D+WS G +L + G F
Sbjct: 167 ------------------SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
E + + + + + M A+ RR D T ++ R W +
Sbjct: 209 DD----EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264
Query: 379 RLPNLI--MQHVDHSAGD 394
LP+ + M+ V S D
Sbjct: 265 NLPDYLRPMEEVQGSYAD 282
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 93
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ F R Q++ + ++H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 189
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 190 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 73
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ IV E G L++ R + F D R +QL+ V++ H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
+++ H DLK EN LL DGS + +K+ DFG ++
Sbjct: 132 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 166
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
H V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 167 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ F R Q++ + ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 217
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 218 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ F R Q++ + ++H L L
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 191
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 192 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ IV E G L++ R + F D R +QL+ V++ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
+++ H DLK EN LL DGS + +K+ DFG +
Sbjct: 133 AMQVAHRDLKLENTLL-------------------DGS------PAPRLKIADFGYSKAS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
H V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 168 VLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ F R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+++ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+I+ G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 35/241 (14%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V + + VA+K + + R + V+ R HD V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHD----NVVDM 107
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ + + + +V E L G +L D + I V +L +++++H +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIH 164
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL S +K+ D+ F ++ SK+ +PK +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKE------VPKRKXL----------------- 201
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APEVI L + D+WS+G +++E+ GE + N L M R+ L
Sbjct: 202 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSL 257
Query: 338 P 338
P
Sbjct: 258 P 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ F R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGG 152
+ ++ +G GT+GQV + + +L AIK++ E EI++L++ + H +I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 153 TRCVQIR-NWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
I+ N + + +V E G S+ D ++ + + + + R++L ++ +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H+ ++IH D+K +N+LL +++ +KL+DFG +
Sbjct: 146 HQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQ 178
Query: 271 EHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 314
+ + + T ++ APEVI +++ DLWS+G +E+ G
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ F R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E G ++ LR+ S P R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+++ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ F R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ F R Q++ + ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 197
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 198 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E + G ++ LR+ F R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y AP +IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
L K+G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
G+ + W I+ E L G S D L P+D + + R++L+ +
Sbjct: 87 GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 133
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + IH D+K N+LL VK+ D+ G
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQL 169
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T + V T + APEVI ++ D+WS+G +EL GE
Sbjct: 170 TDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI+ K + IE + ++ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V++ F +++ +V E G ++ LR+ F R Q++ + ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
L LI+ DLKPEN+++ Y+KV D+ F R G T
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW-- 196
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++R+ K+G G+FG++ + + E VAIK+ K+ + + E + + L GG
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL-LYESKIYRILQ----GG 62
Query: 153 TRCVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
T +R WF ++ +V + LGPSL D S R + V L Q++ V F+H
Sbjct: 63 TGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVH 120
Query: 212 ELRLIHTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H D+KP+N L+ A V + D+ L++ +D S +++P
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFG-LAKKYRDTSTHQHIP------------- 166
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
++++ + T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 167 ---YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 49/232 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI ++K + + EI+ H +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNE 91
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
R +Q N+ F +++ +V E G ++ LR+ S P R Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 149
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++H L LI+ DLKPEN+++ Y+KV D+ R
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK----------------- 192
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ---GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 59/289 (20%)
Query: 48 GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
GN G+ C + ++P S P +P +KD + PR ++ K+G G F
Sbjct: 151 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 195
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
G+V N K VA+K ++ + EA + E +V++ L +HD + V++ +
Sbjct: 196 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 248
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
I I+ E + SL DFL+ + P+ + + Q+ E +AF+ + IH DL+ N
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 308
Query: 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 284
IL+ ++ K+ D+ ++ G+ F K +A + I+FGS T +
Sbjct: 309 ILVSASLVCKIADFGL----ARVGAKFP--IKWTAPEAINFGSFTIK------------- 349
Query: 285 RAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
D+WS G +L+E+ + G + N E + +ER
Sbjct: 350 --------------SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 49/232 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI ++K + + +I+ H +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
R +Q N+ F +++ +V E G ++ LR+ F R Q
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------- 193
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ---GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
L K+G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
+++ + I+ E L G S D L P+D + + R++L+ + ++H
Sbjct: 72 GSYLKD-----TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH 121
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+ IH D+K N+LL VK+ D+ G T
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDT 157
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
+ V T + APEVI ++ D+WS+G +EL GE
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
L K+G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
+++ + I+ E L G S D L P+D + + R++L+ + ++H
Sbjct: 72 GSYLKD-----TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH 121
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+ IH D+K N+LL VK+ D+ G T
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDT 157
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
+ V T + APEVI ++ D+WS+G +EL GE
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+Y K+G+G G V D + VAI+ + + ++ +I ++ R ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I N+ D + + +V E L G SL D + + I V R+ L+++
Sbjct: 79 ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
F+H ++IH ++K +NILL DGS +KL DFG
Sbjct: 132 FLHSNQVIHRNIKSDNILL-----------------GMDGS----------VKLTDFGFC 164
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 165 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 102/248 (41%), Gaps = 37/248 (14%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY + +G G FG D KELVA+K + E EI + R RH
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-INHRSLRH---- 75
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ I+ E G LY+ R + F D R +QLL V++ H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
+++ H DLK EN LL DGS + +K+ DFG ++
Sbjct: 134 SMQICHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 168
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQT-HENLEHL 327
H V T Y APEV+L ++ D+WS G L + G F+ E ++
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR 228
Query: 328 AMMERVLG 335
++R+L
Sbjct: 229 KTIQRILS 236
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ +G G+FG+V+ E A+KI+ K + IE + ++ + V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ F +++ +V E + G ++ LR+ S P R Q++ + ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
I+ DLKPEN+L+ Y++V D+ F R G T
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ T APE+IL G+N D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY ++ +G G FG D + ELVA+K + K EI + R RH
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ IV E G L++ R + F D R +QL+ V++ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
+++ H DLK EN LL DGS + +K+ DFG ++
Sbjct: 133 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
H V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 168 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
L K+G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
G+ + W I+ E L G S D L P+D + + R++L+ +
Sbjct: 92 GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 138
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + IH D+K N+LL VK+ D+ G
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQL 174
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
T + V T + APEVI ++ D+WS+G +EL GE
Sbjct: 175 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 49/232 (21%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++ + +G G+FG+V+ E A+KI ++K + + EI+ H +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNE 91
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
R +Q N+ F +++ +V E G ++ LR+ S P R Q
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 149
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++H L LI+ DLKPEN+++ Y++V D+ R
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK----------------- 192
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ---GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 131/336 (38%), Gaps = 82/336 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLARHDIG 151
Y++ ++G+G F V C + A KI+ + R+ +E + + RL +H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH--- 80
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
V++ + H ++F+ + G L++ + Y S D + +Q+LE+V
Sbjct: 81 -PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHC 137
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 267
H++ ++H DLKPEN+LL S K +A+KL DFG
Sbjct: 138 HQMGVVHRDLKPENLLLASK------------------------LKGAAVKLADFGLAIE 173
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
E Q T Y +PEV+ + P DLW+ G IL L G F +
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---- 229
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
R + + GA D+P W
Sbjct: 230 -------------------HRLYQQIKAGA-YDFPSPE---------W------------ 248
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
D + DL+ +L +P++R+ A EAL+HP+ +
Sbjct: 249 -DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 85/341 (24%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
T Y + +G G++ C A+KI I+K + EI++L R +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL--- 204
+ +++ +D ++ +V E + G L D + + + S RE L
Sbjct: 76 ----PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS-----EREASAVLFTIT 126
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
++V ++H ++H DLKP NIL Y +I++ D
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICD 163
Query: 265 FGSTTFEHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
FG ++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 164 FGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN- 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
GP D E+ R + +S+ K
Sbjct: 223 -------------GP---------DDTPEEILARIGSGKFSLSGGYWNSVSDTAK----- 255
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
DL+ +L DP +RL A LRHP+
Sbjct: 256 ---------------DLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 32/232 (13%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ IV E G L++ R + F D R +QL+ V++ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+++ H DLK EN LL + P K + S + PKS+
Sbjct: 133 AMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST------------- 176
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 177 -------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
++ K+G G FG+V N K VA+K ++ + EA + E +V++ L +HD +
Sbjct: 18 KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V++ + I I+ E + SL DFL+ + P+ + + Q+ E +AF+ +
Sbjct: 72 LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ ++ K+ D+ L+R +D Y IK
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L+E+ + G + N E + +ER
Sbjct: 178 ----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V+ + H+ IV E G L++ R + F D R +QL+ V++ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
+++ H DLK EN LL DGS + +K+ FG ++
Sbjct: 133 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICAFGYSKSS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
H V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 168 VLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 85 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 185
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 186 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 236 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 273
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 133/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S +L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTEL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 72 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 170
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 171 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 219 YKRISRVEFTFP------------DFVTEGAR---------------------------- 238
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 239 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 81 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 181
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 232 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 131/345 (37%), Gaps = 94/345 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 94 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 146
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ DFG
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSA---------------------------GELKIADFG 179
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
S + + T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 180 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
+ RV P + GAR
Sbjct: 240 TYKRISRVEFTFP------------DFVTEGAR--------------------------- 260
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 261 -----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 79/327 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+GEG+ G V + VA+K++ + R + V+ R +H V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----FNVVEM 107
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ + ++ E L G +L D + + I V E +L+++A++H +IH
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQGVIH 164
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
D+K ++ILL VK+ D+ F ++ SKD +PK +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD------VPKRKXL----------------- 201
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
V T ++ APEVI + D+WS+G +++E+ GE
Sbjct: 202 -VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP--------------------- 239
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
YF S ++A+ +L P +++ + L D
Sbjct: 240 -------------PYF-------------SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
L+ +L DP ER A+E L HPF +
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 73 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 172 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 220 YKRISRVEFTFP------------DFVTEGAR---------------------------- 239
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 80 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 181 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 231 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 268
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
++ +G+G FGQVV+ + AIK +R + + E+ +L L +
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
W + RN + +F + +LYD + + + R L RQ+
Sbjct: 71 ----WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
LE+++++H +IH +LKP NI + + VK+ D+ KN+ +S I +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVE 310
D + + + + T Y A EV+ G G +N D +S+G I E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 73 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE I G + DLWS+G + E G+ F+ + E
Sbjct: 172 ------------CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 220 YKRISRVEFTFP------------DFVTEGAR---------------------------- 239
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ----------DLISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 83 VFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV 141
VF E++ + IL +G+G+FG+V N+ K++ A+K +NK + E+
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKY---MNKQKCVERNEVRN 61
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNH---ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
+ + + G + W+ +++ +V LG L L++N + F + V+
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKL 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
+L+ ++ ++ R+IH D+KP+NILL +V + D+ + LP+ +
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM----------LPRET 169
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSG 314
I + + T+ Y APE+ G G+++ D WS+G EL G
Sbjct: 170 QI---------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 75 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 130/342 (38%), Gaps = 82/342 (23%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
++T Y++ ++G+G F V C + A KI+ + R+ +E + + RL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+H V++ + +VF+ + G L++ + Y S D + +Q+LE
Sbjct: 61 KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
SV H ++H DLKPEN+LL S K +A+KL DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
G D T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
R + + GA D+P W
Sbjct: 211 Q-----------------------HRLYQQIKAGA-YDFPSPE---------W------- 230
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
D + DL+ +L +PA+R+ A EAL+HP+ +
Sbjct: 231 ------DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 73 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---- 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 172 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 220 YKRISRVEFTFP------------DFVTEGAR---------------------------- 239
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 130/342 (38%), Gaps = 82/342 (23%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
++T Y++ ++G+G F V C + A KI+ + R+ +E + + RL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+H V++ + +VF+ + G L++ + Y S D + +Q+LE
Sbjct: 61 KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
SV H ++H DLKPEN+LL S K +A+KL DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
G D T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
R + + GA D+P W
Sbjct: 211 Q-----------------------HRLYQQIKAGA-YDFPSPE---------W------- 230
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
D + DL+ +L +PA+R+ A EAL+HP+ +
Sbjct: 231 ------DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 69 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHA----------PSSRRTTL---- 167
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 168 ------------SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 216 YKRISRVEFTFP------------DFVTEGAR---------------------------- 235
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 67 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 119
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 166 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 214 YKRISRVEFTFP------------DFVTEGAR---------------------------- 233
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 234 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 69 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---- 167
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 168 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 216 YKRISRVEFTFP------------DFVTEGAR---------------------------- 235
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 70 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 170
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 221 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTXL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 61/267 (22%)
Query: 85 AIGENLTP---RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID- 140
A+G + P YR+L +G+G F +V K+ R I RE A+ ID
Sbjct: 2 AMGSDEQPHIGNYRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDK 47
Query: 141 ------VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSY 188
LQ+L R + V++ + + ++ E G ++D+L ++
Sbjct: 48 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AH 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R RQ++ +V + H+ R++H DLK EN+LL + +K+ D+ F + + G
Sbjct: 106 GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCI 307
KL F + Y APE+ G ++ P D+WS+G I
Sbjct: 166 ------------KLDTF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVI 200
Query: 308 LVELCSGEALFQTHENLEHLAMMERVL 334
L L SG F +NL+ L ERVL
Sbjct: 201 LYTLVSGSLPFDG-QNLKELR--ERVL 224
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
T Y + +G G++ C A+KI I+K + EI++L R +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL-- 204
+ +++ +D ++ +V E K G L LR+ + RE L
Sbjct: 76 ----PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE------REASAVLFTI 125
Query: 205 -ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
++V ++H ++H DLKP NIL Y +I++
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRIC 162
Query: 264 DFGSTTFEHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
DFG ++ + + T ++ APEV+ G++ CD+WS+G +L +G F
Sbjct: 163 DFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
++IL +G G+FG+V A+K+++ R +E +RL +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIVTHP 66
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+++ F I ++ + + G L+ LRK+ + FP + + ++ ++ ++H
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHS 124
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+I+ DLKPENILL K+ IK+ DFG +
Sbjct: 125 KDIIYRDLKPENILL---------------------------DKNGHIKITDFGFAKYVP 157
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
+ T Y APEV+ +N D WS G ++ E+ +G F
Sbjct: 158 DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 85 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 183
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 184 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 232 YKRISRVEFTFP------------DFVTEGAR---------------------------- 251
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 252 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 70 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---- 168
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 169 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 217 YKRISRVEFTFP------------DFVTEGAR---------------------------- 236
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 237 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDDL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ I+ +G G FG+V + + A+KI +NK+ E R R +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNG 131
Query: 154 RCVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
C I F NH+ +V + +G L L K + P D+ R +++ ++
Sbjct: 132 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDS 190
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
+H+L +H D+KP+N+LL ++++ D+ S +K+ D G+
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADF------------------GSCLKMNDDGTVQ 232
Query: 270 FEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHENL 324
S V T Y +PE++ G+G P CD WS+G + E+ GE F +
Sbjct: 233 -----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 325 E 325
E
Sbjct: 288 E 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 131/340 (38%), Gaps = 82/340 (24%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSINKYREAAMIEIDV-LQRLAR 147
T Y++ ++G+G F V C +E A+ I R+ +E + + RL +
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
H V++ + H ++F+ + G L++ + Y S D + +Q+LE+
Sbjct: 69 H----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V H++ ++H +LKPEN+LL S K +A+KL DFG
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFG 158
Query: 267 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
E Q T Y +PEV+ + P DLW+ G IL L G F +
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
R + + GA D+P W
Sbjct: 219 -----------------------HRLYQQIKAGA-YDFPSPE---------W-------- 237
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
D + DL+ +L +P++R+ A EAL+HP+ +
Sbjct: 238 -----DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 130/344 (37%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E P +Y L+K S F +L +
Sbjct: 73 ----PNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 172 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 220 YKRISRVEFTFP------------DFVTEGAR---------------------------- 239
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQ 157
+G G FG V E + AIK +R N+ RE M E+ L +L I V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VR 67
Query: 158 IRNWFDYRNHICIVFEKLGPS---LYDFLRKNSYRSFPID-------LVRELGR------ 201
N + +N EKL PS +Y +++ R + + E R
Sbjct: 68 YFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+ E+V F+H L+H DLKP NI + VKV D+ ++ +D L A
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ H+ V T+ Y +PE I G +++ D++S+G IL EL
Sbjct: 184 ------------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ I+ +G G FG+V + + A+KI +NK+ E R R +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNG 147
Query: 154 RCVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
C I F NH+ +V + +G L L K + P D+ R +++ ++
Sbjct: 148 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDS 206
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
+H+L +H D+KP+N+LL ++++ D+ S +K+ D G+
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADF------------------GSCLKMNDDGTVQ 248
Query: 270 FEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHENL 324
S V T Y +PE++ G+G P CD WS+G + E+ GE F +
Sbjct: 249 -----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
Query: 325 E 325
E
Sbjct: 304 E 304
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHD 149
+ L +G+G+FG+V+ ++ A+K++ ++I K +E M E +VL + +H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
V + F + + V + + G L+ L++ R F R ++ ++
Sbjct: 100 F----LVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALG 153
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H L +++ DLKPENILL S ++ + D+ + I+ ST
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN------------------IEHNST 195
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
T S T Y APEV+ ++ D W +G +L E+ G F + E
Sbjct: 196 T------STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 92/351 (26%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRL 145
+ L Y + +G G F +V E+VAIKI+ ++ EI+ L+ L
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
I Q+ + + N I +V E G L+D++ S + R + RQ++
Sbjct: 66 RHQHI-----CQLYHVLETANKIFMVLEYCPGGELFDYII--SQDRLSEEETRVVFRQIV 118
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+VA++H H DLKPEN+L EY K +KLID
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLF--DEYHK-------------------------LKLID 151
Query: 265 FGSTTFEHQDHSYVVST----RHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQ 319
FG + Y + T Y APE+I G + D+WS+G +L L G F
Sbjct: 152 FGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG---FL 208
Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
++ +A+ ++++ RG + D P +
Sbjct: 209 PFDDDNVMALYKKIM--------------------RG-KYDVPKWLS------------- 234
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
P+ I+ LLQ +L+ DP +R+ + L HP+ +D P
Sbjct: 235 -PSSIL------------LLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPV 272
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 94 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 146
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDDL---- 192
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 193 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 241 YKRISRVEFTFP------------DFVTEGAR---------------------------- 260
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 261 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 130/345 (37%), Gaps = 94/345 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 69 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSA---------------------------GELKIADFG 154
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
S + T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 155 WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
+ RV P + GAR
Sbjct: 215 TYKRISRVEFTFP------------DFVTEGAR--------------------------- 235
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 -----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 26/230 (11%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RYR+ K+G G+FG + D E VAIK+ K+ + + + ++ + GG
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 62
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
IR ++ +V E LGPSL D S R F + V L Q++ + ++H
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 121
Query: 213 LRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
IH D+KP+N L+ V + D+ L++ +D +++P
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP-------------- 166
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
++++ + T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 167 --YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 26/244 (10%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
RYR+ K+G G+FG + D E VAIK+ K+ + + + ++ + GG
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
IR ++ +V E LGPSL D S R F + V L Q++ + ++H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 123
Query: 213 LRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
IH D+KP+N L+ V + D+ L++ +D +++P
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP-------------- 168
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
++++ + T Y + LG+ + DL S+G +L+ G +Q +
Sbjct: 169 --YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226
Query: 330 MERV 333
ER+
Sbjct: 227 YERI 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 71 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH +L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 171
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 222 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 130/344 (37%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E P +Y L+K S F +L +
Sbjct: 73 ----PNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---- 171
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 172 ------------XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 220 YKRISRVEFTFP------------DFVTEGAR---------------------------- 239
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV- 141
A T Y++ ++G+G F V C + A KI+ + R+ +E +
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
+ RL +H V++ + +VF+ + G L++ + Y S D +
Sbjct: 83 ICRLLKH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI- 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+LESV +H+ ++H DLKPEN+LL S K +A+
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASK------------------------CKGAAV 172
Query: 261 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
KL DFG E Q T Y +PEV+ + P D+W+ G IL L G
Sbjct: 173 KLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 70 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ ++ + + P S L
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTTL---- 168
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 169 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 217 YKRISRVEFTFP------------DFVTEGAR---------------------------- 236
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 237 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 96 ILSKM-GEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDI 150
IL KM G+G+FG+V + + AIK ++ ++ E M+E VL H
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ F + ++ V E L G +Y S F + +++ +
Sbjct: 80 ----LTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQ 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
F+H +++ DLK +NILL ++K+ D+ G +N+ L D +
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTN 176
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEH 326
F T Y APE++LG +N+ D WS G +L E+ G++ F Q E L H
Sbjct: 177 XF--------CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 327 LAMMERVLGP 336
M+ P
Sbjct: 229 SIRMDNPFYP 238
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ ++ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTTL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDV 141
+ +N +YR+L G+G FG+V C ++ A K + A+ E +
Sbjct: 181 VTKNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
L+++ + V + ++ ++ +C+V + G L + FP
Sbjct: 238 LEKVNSRFV-----VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
++ + +H R+++ DLKPENILL ++++ D ++P+ I
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTI 342
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
K V T Y APEV+ + + D W++GC+L E+ +G++ FQ
Sbjct: 343 K---------------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRA 349
+ +ER++ +P R +A
Sbjct: 388 RKKKIKREEVERLVKEVPEEYSERFSPQA 416
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDV 141
+ +N +YR+L G+G FG+V C ++ A K + A+ E +
Sbjct: 181 VTKNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
L+++ + V + ++ ++ +C+V + G L + FP
Sbjct: 238 LEKVNSRFV-----VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
++ + +H R+++ DLKPENILL ++++ D ++P+ I
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTI 342
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
K V T Y APEV+ + + D W++GC+L E+ +G++ FQ
Sbjct: 343 K---------------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRA 349
+ +ER++ +P R +A
Sbjct: 388 RKKKIKREEVERLVKEVPEEYSERFSPQA 416
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 49/264 (18%)
Query: 84 FAIGENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL 142
F EN Y + SK +G G F V +C + A K ++ K R ++L
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLK---KRRRGQDCRAEIL 76
Query: 143 QRLARHDIGGT--RCVQIRNWFDYRNHICIVFEKLG---------PSLYDFLRKNSYRSF 191
+A ++ + R + + ++ + I ++ E P L + + +N
Sbjct: 77 HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN----- 131
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
D++R L +Q+LE V ++H+ ++H DLKP+NILL S
Sbjct: 132 --DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS---------------------- 166
Query: 252 KNLPKSSAIKLIDFG-STTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
+ IK++DFG S H + ++ T Y APE++ D+W++G I
Sbjct: 167 --IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAY 224
Query: 310 ELCSGEALFQTHENLEHLAMMERV 333
L + + F +N E + +V
Sbjct: 225 MLLTHTSPFVGEDNQETYLNISQV 248
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 58/255 (22%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID-------VLQRLA 146
YR+L +G+G F +V K+ R I RE A+ ID LQ+L
Sbjct: 17 YRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDKTQLNPTSLQKLF 62
Query: 147 RH-----DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELG 200
R + V++ + + ++ E G ++D+L ++ R
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKF 120
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
RQ++ +V + H+ R++H DLK EN+LL + +K+ D+ F + + G
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------ 168
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
KL F Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 169 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 320 THENLEHLAMMERVL 334
+NL+ L ERVL
Sbjct: 216 G-QNLKELR--ERVL 227
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 84 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 184
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 185 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 235 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 272
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 83 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 183
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 234 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 81 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 181
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 232 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-CLLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 192
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+F V T Y +PE++ + DLW++GCI+ +L +G
Sbjct: 193 SF--------VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 75 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
K GHY+ +G+ L G GTFG+V VA+KI+ K R ++
Sbjct: 14 KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVV 60
Query: 138 -----EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSF 191
EI L +L RH +++ + I +V E + G L+D++ KN
Sbjct: 61 GKIRREIQNL-KLFRH----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RL 113
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
R L +Q+L V + H ++H DLKPEN+LL + K+ D+ LS DG +
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFL 172
Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ GS + + V+S R Y PEV D+WS G IL L
Sbjct: 173 RX----------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYAL 209
Query: 312 CSGEALF 318
G F
Sbjct: 210 LCGTLPF 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 126/342 (36%), Gaps = 92/342 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
+ I+ +G+G FG V + + K ++A+K++ +E EI++ L +
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
I +++ N+F R I ++ E P LY L+K+ F +L +++
Sbjct: 76 I-----LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADAL 127
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
+ HE ++IH D+KPEN+L+ YK +K+ DFG
Sbjct: 128 HYCHERKVIHRDIKPENLLM---------GYK------------------GELKIADFGW 160
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
S + T Y PE+I G + DLW G + E G F + + E
Sbjct: 161 SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE- 219
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
H ++ D + + G++
Sbjct: 220 -----------THRRIVNVDLKFPPFLSDGSK---------------------------- 240
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
DL+ LLRY P +RL + + HP+ + RR
Sbjct: 241 ----------DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 323
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 324 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 429
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 430 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 77 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 178 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 228 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 75 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 68/256 (26%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
K GHYV +G GTFG+V VA+KI+ K R
Sbjct: 9 KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
+DV+ ++ R +I+N +R+ HI +++ + G L+D+
Sbjct: 52 -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
+ K+ R ++ R L +Q+L +V + H ++H DLKPEN+LL + K+ D+ LS
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LS 158
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
DG + ++ GS + + V+S R Y PEV D+W
Sbjct: 159 NMMSDGEFLRD----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 303 SVGCILVELCSGEALF 318
S G IL L G F
Sbjct: 196 SCGVILYALLCGTLPF 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ N EA + E V+++L RH+ +
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKL-RHE----K 241
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 242 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L R +D Y IK
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFG-LGRLIEDNEYTARQGAKFPIK------------ 347
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 348 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 76 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 176
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 177 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 227 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 39/251 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
+ + +G+G+FG+V + + AIK ++ ++ E M+E VL H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+ F + ++ V E L G +Y S F + +++ +
Sbjct: 80 F----LTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGL 132
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+H +++ DLK +NILL ++K+ D+ G +N+ L D +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKT 176
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 325
F T Y APE++LG +N+ D WS G +L E+ G++ F Q E L
Sbjct: 177 NEF--------CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 326 HLAMMERVLGP 336
H M+ P
Sbjct: 229 HSIRMDNPFYP 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 27/264 (10%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+L K G G QV + ++ A+K+++ R A +R ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + F + ++ E L G L+ L + F D ++ ++ +H+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQK 140
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+I+ DLKPENI+L +VK+ D+ S DG+
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV----------------------- 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
H++ T Y APE+++ G N D WS+G ++ ++ +G F + + + +
Sbjct: 178 THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 334 LGPLPHHMVIRADRRAEKYFRRGA 357
LP ++ A +K +R A
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNA 260
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G FG V C + + VAIK + S ++ R+A ++E+ L R+ +I ++
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 66
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
+ N +C+V E G SLY+ L + Q + VA++H ++
Sbjct: 67 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
LIH DLKP N+LLV+ + +K+ DFG+
Sbjct: 127 LIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTACDIQTH 160
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ + + APEV G ++ CD++S G IL E+
Sbjct: 161 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 130/339 (38%), Gaps = 92/339 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + ++K ++A+K++ E A +E + +Q RH
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 65 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 163
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 164 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 212 YKRISRVEFTFP------------DFVTEGAR---------------------------- 231
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
DL+ LL+++P++R RE L HP+ T +
Sbjct: 232 ----------DLISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E++ P L+DF+ + + +L R
Sbjct: 64 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 153
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 154 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 213 PFEHDEEI 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
++T Y++ +G+G F V C A KI+ + R+ +E + + RL
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+H + V++ + +VF+ + G L++ + Y S D + +Q+LE
Sbjct: 61 KH----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+V H++ ++H DLKPEN+LL S K +A+KL DF
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G D T Y +PEV+ + P D+W+ G IL L G
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 397 DLLQGLLRYDPAERLKAREALRHPFFTR 424
+L+ +L +PA+R+ A EAL+HP+ +
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
+G+GT+G V D + +AIK I ++Y + EI + + L +I VQ
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 84
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
F I I E++ G SL LR + P+ D + +G +Q+LE + ++H+
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 214 RLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+++H D+K +N+L+ + V K+ D+ R + I+ + TF
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKR----------------LAGINPCTETF-- 183
Query: 273 QDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF 318
T Y APE+I G+ D+WS+GC ++E+ +G+ F
Sbjct: 184 ------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 132/344 (38%), Gaps = 92/344 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + K ++A+K++ E A +E + +Q RH
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F R ++ + + LG ++Y L+K S F +L +
Sbjct: 68 ----PNILRLYGYFHDSTRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H ++IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---- 166
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + +
Sbjct: 167 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 215 YKRISRVEFTFP------------DFVTEGAR---------------------------- 234
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ----------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
+G G FG V C + + VAIK + S ++ R+A ++E+ L R+ +I ++
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 65
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
+ N +C+V E G SLY+ L + Q + VA++H ++
Sbjct: 66 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
LIH DLKP N+LLV+ + +K+ DFG+
Sbjct: 126 LIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTACDIQTH 159
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ + + APEV G ++ CD++S G IL E+
Sbjct: 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 44/270 (16%)
Query: 94 YRILSKMGEGTFGQV-VECFDNEKKELVAIKI----VRSINKYREAAMIEIDVLQRLARH 148
Y + + +G G++G+V + + A KI V ++++++ EI++++ L
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHP 83
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+I +++ F+ I +V E G L++ R R F + + +L +V
Sbjct: 84 NI-----IRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 136
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
A+ H+L + H DLKPEN L ++ PD S +KLIDFG
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 172
Query: 267 STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
+ F+ V T +Y +P+V+ GL + CD WS G ++ L G F + E
Sbjct: 173 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
+ + P + +AE RR
Sbjct: 232 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
+G+GT+G V D + +AIK I ++Y + EI + + L +I VQ
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 70
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
F I I E++ G SL LR + P+ D + +G +Q+LE + ++H+
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 214 RLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+++H D+K +N+L+ + V K+ D+ S + I+ + TF
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFG----------------TSKRLAGINPCTETF-- 169
Query: 273 QDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
T Y APE+I G+ D+WS+GC ++E+ +G+ F +E E A M
Sbjct: 170 ------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAM 221
Query: 331 ERV 333
+V
Sbjct: 222 FKV 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 68/256 (26%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
K GHYV +G GTFG+V VA+KI+ K R
Sbjct: 9 KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
+DV+ ++ R +I+N +R+ HI +++ + G L+D+
Sbjct: 52 -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
+ K+ R ++ R L +Q+L +V + H ++H DLKPEN+LL + K+ D+ LS
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LS 158
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
DG + + GS + + V+S R Y PEV D+W
Sbjct: 159 NMMSDGEFLRT----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 303 SVGCILVELCSGEALF 318
S G IL L G F
Sbjct: 196 SCGVILYALLCGTLPF 211
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 44/270 (16%)
Query: 94 YRILSKMGEGTFGQV-VECFDNEKKELVAIKI----VRSINKYREAAMIEIDVLQRLARH 148
Y + + +G G++G+V + + A KI V ++++++ EI++++ L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHP 66
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+I +++ F+ I +V E G L++ R R F + + +L +V
Sbjct: 67 NI-----IRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 119
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
A+ H+L + H DLKPEN L ++ PD S +KLIDFG
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGL 155
Query: 267 STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
+ F+ V T +Y +P+V+ GL + CD WS G ++ L G F + E
Sbjct: 156 AARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 214
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
+ + P + +AE RR
Sbjct: 215 VMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 193
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+F V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 SF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK +++A
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA-------RANAF-------- 192
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 193 ----------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 191
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 192 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 129/339 (38%), Gaps = 92/339 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
DL+ LL+++P++R RE L HP+ T +
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 67
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 68 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 173
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 174 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 95
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 193
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 157/384 (40%), Gaps = 73/384 (19%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQV---VECFDNEKKELVAIK-IVRSINKYRE 133
KD ++ L+ ++I K+GEGTF V +E +A+K ++ + + R
Sbjct: 7 KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFP 192
AA E+ L D + ++ F +H+ I L S D L S++
Sbjct: 67 AA--ELQCLTVAGGQD----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
VRE L +++ +H+ ++H D+KP N L ++ Y + G++
Sbjct: 119 ---VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFGLAQGTH-- 169
Query: 253 NLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRH----------YRAPEVILGL-GWN 296
+ I+L+ F + + + S +S R +RAPEV+
Sbjct: 170 ----DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 297 YPCDLWSVGCILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADR---RAEKY 352
D+WS G I + L SG ++ ++L LA + M IR R +A K
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKT 275
Query: 353 FRRGARLDWPDGATSRDSMRAVWKLLR--------LPNLIMQHVDHSAG------DLIDL 398
F G + ++D +R + + LR L + I H + G + DL
Sbjct: 276 F--GKSILCSKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332
Query: 399 LQGLLRYDPAERLKAREALRHPFF 422
L LL +PA R+ A EAL HPFF
Sbjct: 333 LDKLLDLNPASRITAEEALLHPFF 356
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 241 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 346
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 241 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 346
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 47/244 (19%)
Query: 82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV 141
++ + Y + ++G+G F V C A KI+ + ++ + +
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQK 74
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG- 200
L+R AR C ++++ R H I E ++D + F + RE
Sbjct: 75 LEREAR------ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYS 126
Query: 201 --------RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
+Q+LES+A+ H ++H +LKPEN+LL S
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------- 164
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
K +A+KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL
Sbjct: 165 --AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 222
Query: 311 LCSG 314
L G
Sbjct: 223 LLVG 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 27/264 (10%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+L K G G QV + ++ A+K+++ R A +R ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + F + ++ E L G L+ L + F D ++ ++ +H+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQK 140
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+I+ DLKPENI+L +VK+ D+ S DG+
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV----------------------- 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
H + T Y APE+++ G N D WS+G ++ ++ +G F + + + +
Sbjct: 178 THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 334 LGPLPHHMVIRADRRAEKYFRRGA 357
LP ++ A +K +R A
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNA 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 241 LVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 346
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 72 LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 178 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 72
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 73 --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 168
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 169 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 140/353 (39%), Gaps = 59/353 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQ 143
+GE + +S++G G G V + ++A K++ K R + E+ VL
Sbjct: 10 VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL- 68
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
H+ V F I I E + D + K + R P +++ ++ +
Sbjct: 69 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAV 123
Query: 204 LESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L +A++ E +++H D+KP NIL+ S +K+ D+ + +L
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQL 165
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
ID + +F V TR Y APE + G ++ D+WS+G LVEL G +
Sbjct: 166 IDSMANSF--------VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPD 217
Query: 323 NLEHLAMMER--VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL-- 378
E A+ R V G I R G +D SR +M A+++LL
Sbjct: 218 AKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMD------SRPAM-AIFELLDY 270
Query: 379 -------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
+LPN + D + + L +PAER + H F R
Sbjct: 271 IVNEPPPKLPNGVF------TPDFQEFVNKCLIKNPAERADLKMLTNHTFIKR 317
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 71
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 72 --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 167
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 168 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 92/336 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGGTRC 155
+G+G FG V + + K ++A+K++ +E EI++ L +I
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI----- 76
Query: 156 VQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ N+F R I ++ E P LY L+K+ F +L +++ + HE
Sbjct: 77 LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
++IH D+KPEN+L+ YK +K+ DFG S
Sbjct: 134 KVIHRDIKPENLLM---------GYK------------------GELKIADFGWSVHAPS 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
+ T Y PE+I G + DLW G + E G F + + E
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------- 219
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
H ++ D + + G++
Sbjct: 220 -----THRRIVNVDLKFPPFLSDGSK---------------------------------- 240
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
DL+ LLRY P +RL + + HP+ + RR
Sbjct: 241 ----DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 92/336 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGGTRC 155
+G+G FG V + + K ++A+K++ +E EI++ L +I
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI----- 77
Query: 156 VQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ N+F R I ++ E P LY L+K+ F +L +++ + HE
Sbjct: 78 LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
++IH D+KPEN+L+ YK +K+ DFG S
Sbjct: 135 KVIHRDIKPENLLM---------GYK------------------GELKIADFGWSVHAPS 167
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
+ T Y PE+I G + DLW G + E G F + + E
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------- 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
H ++ D + + G++
Sbjct: 221 -----THRRIVNVDLKFPPFLSDGSK---------------------------------- 241
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
DL+ LLRY P +RL + + HP+ + RR
Sbjct: 242 ----DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 273
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 129/339 (38%), Gaps = 92/339 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
+++ +F + ++ E LG ++Y L+K S F +L +
Sbjct: 71 ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+++ H R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---- 169
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
T Y PE+I G + DLWS+G + E G+ F+ + E
Sbjct: 170 ------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
+ RV P + GAR
Sbjct: 218 YKRISRVEFTFP------------DFVTEGAR---------------------------- 237
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
DL+ LL+++P++R RE L HP+ T +
Sbjct: 238 ----------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 95 RILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+++ ++G G FG+V + ++ K VAIK ++ E+ + E ++++L +HD
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHD---- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+ VQ+ I IV E + SL DFL+ R+ + + ++ Q+ +A++
Sbjct: 65 KLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+ IH DL+ NIL+ + K+ D+ L+R +D IK
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFG-LARLIEDNEXTARQGAKFPIK----------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 331
+ APE L + D+WS G +L EL + G + N E L +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 220
Query: 332 R 332
R
Sbjct: 221 R 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 70
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 71 --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 166
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 167 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 189
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+F V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 190 SF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 69
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 70 --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 165
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 166 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 38/239 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA-----MIEIDVLQRLARH 148
++ LS++G G++G+V + E L A+K RS++ +R + E+ +++ +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
CV++ ++ + + E GPSL S P V R L ++A
Sbjct: 117 PC----CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALA 171
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H L+H D+KP NI L K+ D+ L ++L G+
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL------------------VELGTAGAG 213
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ D Y+ APE++ G + D++S+G ++E+ L E + L
Sbjct: 214 EVQEGDPRYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD 149
+ IL +G G FG+V ++ A+KI+ + A E DVL
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 150 IGGTRCVQIRNW-FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
G ++ + ++ F N++ +V + +G L L K R P ++ R +++ ++
Sbjct: 131 -GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAI 188
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+H+L +H D+KP+NIL+ ++++ D+ S +KL++ G+
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGT 230
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHE 322
S V T Y +PE++ + + CD WS+G + E+ GE F
Sbjct: 231 V-----QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 323 NLE 325
+E
Sbjct: 286 LVE 288
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
L ++G G+FG V D E+VAIK + + N+ + + E+ LQ+L RH
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 113
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+Q R + + +V E S D L + +++ + L+ +A++H
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 172
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+IH D+K NIL L + +KL DFGS +
Sbjct: 173 HNMIHRDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMA 205
Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 312
+ + V T ++ APEVIL + ++ D+WS+G +EL
Sbjct: 206 PANXF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 40/223 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLAR-HDIGGTR 154
+GEG+F VV + AIKI+ R I K + + E DV+ RL +
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
C Q D + + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 105 CFQD----DEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 157
Query: 215 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR---------------------- 195
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 196 ---ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 187
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 188 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 99 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 153
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 188
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 189 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 248 PFEHDEEI 255
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 74
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 172
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 173 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 79 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 168
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 169 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 228 PFEHDEEI 235
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 80 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 229 PFEHDEEI 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 112 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 166
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 201
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 202 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 260
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 261 PFEHDEEI 268
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 80 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 229 PFEHDEEI 236
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 79 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 168
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 169 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 228 PFEHDEEI 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 80 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 229 PFEHDEEI 236
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD 149
+ +L +G G++ +V+ + + A+K+V+ +N + ++ + V ++ + H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+G C Q + R I + G ++ R+ R P + R ++ ++
Sbjct: 71 FLVGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLAL 123
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++HE +I+ DLK +N+LL S ++K+ DY + G
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GD 165
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
TT S T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 166 TT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 65 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 214 PFEHDEEI 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E+V F+H L+H DLKP NI + VKV D+ ++ +D L A
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ H V T+ Y +PE I G +++ D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 65 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 214 PFEHDEEI 221
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 196
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 197 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 256 PFEHDEEI 263
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 92 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 241 PFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 93 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 242 PFEHDEEI 249
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D +FK P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 44/248 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
YR+L +G+G F +V + VA+KI+ + + LQ+L R
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 61
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+ V++ + + +V E G ++D+L + + R RQ++ +V
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAV 119
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+ H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------E 155
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEH 326
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F +NL+
Sbjct: 156 FTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKE 213
Query: 327 LAMMERVL 334
L ERVL
Sbjct: 214 LR--ERVL 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 44/248 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
YR+L +G+G F +V + VA+KI+ + + LQ+L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+ V++ + + +V E G ++D+L ++ R RQ++ +V
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+ H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------E 162
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEH 326
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F +NL+
Sbjct: 163 FTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKE 220
Query: 327 LAMMERVL 334
L ERVL
Sbjct: 221 LR--ERVL 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 64 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 153
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 154 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 213 PFEHDEEI 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 44/248 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
YR+L +G+G F +V + VA+KI+ + + LQ+L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+ V++ + + +V E G ++D+L ++ R RQ++ +V
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+ H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------E 162
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEH 326
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F +NL+
Sbjct: 163 FTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKE 220
Query: 327 LAMMERVL 334
L ERVL
Sbjct: 221 LR--ERVL 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 63
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 64 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 169
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 170 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 87 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 141
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 176
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 177 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 236 PFEHDEEI 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 93 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 242 PFEHDEEI 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 65 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 214 PFEHDEEI 221
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 66 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 171
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 172 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 93 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 242 PFEHDEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 196
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 197 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 256 PFEHDEEI 263
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 37/231 (16%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR-- 147
+ Y + ++G+G F V C A KI+ + ++ + + L+R AR
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQKLEREARIC 59
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+ V++ + + +VF+ + G D + + Y +Q+LE
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILE 116
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
S+A+ H ++H +LKPEN+LL S K +A+KL DF
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADF 152
Query: 266 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 153 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 92 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 241 PFEHDEEI 248
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 92 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 241 PFEHDEEI 248
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG 151
Y + +G G V + KKE VAIK + + + EI + + +I
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI- 70
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLL 204
V F ++ + +V + L G S+ D ++ K ++S +D + + R++L
Sbjct: 71 ----VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
E + ++H+ IH D+K NILL V++ D+ + + G +N +
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK------- 179
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
TF V T + APEV+ + G+++ D+WS G +EL +G A + +
Sbjct: 180 ----TF--------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 227
Query: 324 LEHLAM 329
++ L +
Sbjct: 228 MKVLML 233
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 93 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 242 PFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 92 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 241 PFEHDEEI 248
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 80/349 (22%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+ L +Y I +G G FG V C + K+ K V+ + EI +L +AR
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IAR 59
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
H + + F+ + ++FE + G +++ + +++ ++V + Q+ E+
Sbjct: 60 H----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV-HQVCEA 114
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ F+H + H D++PENI+ + +R +SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENII-------------YQTR------------RSSTIKIIEFG 149
Query: 267 ST-TFEHQDHSYVVSTR-HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
+ D+ ++ T Y APEV + D+WS+G ++ L SG F N
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
+ ++E ++ A + + A S+ A
Sbjct: 210 Q---IIENIM---------------------NAEYTFDEEAFKEISIEA----------- 234
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
+D + LL + R+ A EAL+HP+ + + R + V
Sbjct: 235 -----------MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 37/231 (16%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR-- 147
+ Y + ++G+G F V C A KI+ + ++ + + L+R AR
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQKLEREARIC 58
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
+ V++ + + +VF+ + G D + + Y +Q+LE
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILE 115
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
S+A+ H ++H +LKPEN+LL S K +A+KL DF
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADF 151
Query: 266 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
G + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 152 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
L ++G G+FG V D E+VAIK + + N+ + + E+ LQ+L RH
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+Q R + + +V E S D L + +++ + L+ +A++H
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 133
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+IH D+K NIL L + +KL DFGS +
Sbjct: 134 HNMIHRDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMA 166
Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 312
+ + V T ++ APEVIL + ++ D+WS+G +EL
Sbjct: 167 PANXF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD 149
+ +L +G G++ +V+ + + A+K+V+ +N + ++ + V ++ + H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+G C Q + R I + G ++ R+ R P + R ++ ++
Sbjct: 67 FLVGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLAL 119
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++HE +I+ DLK +N+LL S ++K+ DY + G
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GD 161
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
TT S T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 162 TT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
+GEG+F V + AIKI+ R I K + + E DV+ RL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
++ +F +++ + + + K G L ++RK SF R +++ ++ ++H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+IH DLKPENILL ++++ D+ K LS SK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 60/256 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
YR+L +G+G F +V K+ R I +E A+ ID Q +
Sbjct: 16 YRLLKTIGKGNFAKV--------------KLARHILTGKEVAVRIIDKTQLNSSSLQKLF 61
Query: 154 RCVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVREL 199
R V+I ++ N I +FE + G ++D+L ++ R
Sbjct: 62 REVRIMKVLNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAK 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F + + F N
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----FGN------ 167
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
KL +F + Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 168 -KLDEF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 319 QTHENLEHLAMMERVL 334
+NL+ L ERVL
Sbjct: 214 DG-QNLKELR--ERVL 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
+ Y + ++G+G F V C A KI+ + ++ + + L+R AR
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQKLEREAR-- 57
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG--------- 200
C ++++ R H I E ++D + F + RE
Sbjct: 58 ----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 111
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
+Q+LES+A+ H ++H +LKPEN+LL S K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 261 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
E L +Y++ +G G FG V VAIK V I+ + E +E+
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
+L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 63 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 117
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 152
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+
Sbjct: 153 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
Query: 317 LFQTHENL 324
F+ E +
Sbjct: 212 PFEHDEEI 219
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 136/345 (39%), Gaps = 105/345 (30%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
Y++ S+ +G G G+V++ F+ +E A+K+++ K R E+++ R ++ H +
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
R V + N + R + IV E L G L+ ++ ++F E+ + + E++
Sbjct: 75 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
++H + + H D+KPEN+L S K P+ + +KL DFG
Sbjct: 132 YLHSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFA 167
Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENL 324
TT E D S CD+WS+G I+ + LC + H
Sbjct: 168 KETTGEKYDKS----------------------CDMWSLGVIMYILLCGYPPFYSNHGLA 205
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
M R+ R + ++P+ S S
Sbjct: 206 ISPGMKTRI---------------------RMGQYEFPNPEWSEVS-------------- 230
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 231 --------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 42/285 (14%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ ++G G G+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V + I I+ E + SL DFL+ S I+ + ++ Q+ E +AF+ E
Sbjct: 75 AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ NIL+ K+ D+ L+R +D IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDAEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD 149
+ +L +G G++ +V+ + + A+K+V+ +N + ++ + V ++ + H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+G C Q + R I + G ++ R+ R P + R ++ ++
Sbjct: 82 FLVGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLAL 134
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++HE +I+ DLK +N+LL S ++K+ DY + G
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GD 176
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
TT S T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 177 TT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V++++ RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKI-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 72 LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D + IK
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEWTARQGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 178 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG 151
Y + +G G V + KKE VAIK + + + EI + + +I
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI- 75
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLL 204
V F ++ + +V + L G S+ D ++ K ++S +D + + R++L
Sbjct: 76 ----VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
E + ++H+ IH D+K NILL V++ D+ + + G +N +
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK------- 184
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
TF V T + APEV+ + G+++ D+WS G +EL +G A + +
Sbjct: 185 ----TF--------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 324 LEHLAM 329
++ L +
Sbjct: 233 MKVLML 238
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
+YR+ K+G G+FG + + E VAIK+ K+ + + + + + GG
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQ-----LHIESKFYKMMQGG 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
I+ ++ +V E LGPSL D S R F + V L Q++ + ++H
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 123
Query: 213 LRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
IH D+KP+N L+ V + D+ L++ +D +++P
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP-------------- 168
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
++++ + T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 169 --YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + L DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
L +MG GT GQV + + ++A+K +R E I +D+ L HD V
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC--PYIV 87
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-L 215
Q F + I E +G + + L+K P ++ ++ +++++ ++ E +
Sbjct: 88 QCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH D+KP NILL +K+ D+ R D + +D
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDD-----------------------KAKDR 183
Query: 276 SYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAM 329
S + Y APE I ++ D+WS+G LVEL +G+ ++ + E L
Sbjct: 184 SAGCAA--YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 330 MERVLGP-LPHHMVIRAD 346
+ + P LP HM D
Sbjct: 242 VLQEEPPLLPGHMGFSGD 259
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
YR+L +G+G F +V + VA+KI+ + + LQ+L R
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+ V++ + + +V E G ++D+L ++ R RQ++ +V
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+ H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------E 162
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEH 326
TF ++ ++ Y APE+ G ++ P D+WS+G IL L SG F +NL+
Sbjct: 163 FTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKE 220
Query: 327 LAMMERVL 334
L ERVL
Sbjct: 221 LR--ERVL 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGG 152
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L H I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
C + + + + + + LG SL D+L ++S I L + L +Q+ E +A++
Sbjct: 82 KGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 133
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H IH +L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF 185
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + + Y D+WS G L EL
Sbjct: 186 -------------WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 60/256 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
YR+L +G+G F +V K+ R I +E A+ ID Q +
Sbjct: 16 YRLLKTIGKGNFAKV--------------KLARHILTGKEVAVRIIDKTQLNSSSLQKLF 61
Query: 154 RCVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVREL 199
R V+I ++ N I +FE + G ++D+L ++ R
Sbjct: 62 REVRIMKVLNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAK 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----------------- 161
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 162 -------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 319 QTHENLEHLAMMERVL 334
+NL+ L ERVL
Sbjct: 214 DG-QNLKELR--ERVL 226
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG+V D + A+K VR + +R + +A + R V +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEEL--------MACAGLTSPRIVPL 131
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ I E L G SL +++ P D Q LE + ++H R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
D+K +N+LL S DGS+ L DFG D
Sbjct: 190 GDVKADNVLL-----------------SSDGSH---------AALCDFGHAVCLQPDGLG 223
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
Y+ T + APEV+LG + D+WS C+++ + +G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 60/256 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
YR+L +G+G F +V K+ R I +E A+ ID Q +
Sbjct: 16 YRLLKTIGKGNFAKV--------------KLARHILTGKEVAVKIIDKTQLNSSSLQKLF 61
Query: 154 RCVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVREL 199
R V+I ++ N I +FE + G ++D+L ++ R
Sbjct: 62 REVRIXKVLNHPN-IVKLFEVIETEKTLYLVXEYASGGEVFDYLV--AHGRXKEKEARAK 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F + + F N
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-----FGN------ 167
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
KL F Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 168 -KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 319 QTHENLEHLAMMERVL 334
+NL+ L ERVL
Sbjct: 214 DG-QNLKEL--RERVL 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG+V D + A+K VR + +R + +A + R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEEL--------MACAGLTSPRIVPL 150
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ I E L G SL +++ P D Q LE + ++H R++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
D+K +N+LL S DGS+ L DFG D
Sbjct: 209 GDVKADNVLL-----------------SSDGSH---------AALCDFGHAVCLQPDGLG 242
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
Y+ T + APEV+LG + D+WS C+++ + +G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGG 152
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L H I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
C + + + + + + LG SL D+L ++S I L + L +Q+ E +A++
Sbjct: 82 KGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 133
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H IH +L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF 185
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + + Y D+WS G L EL
Sbjct: 186 -------------WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 42/246 (17%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
L +Y++ +G G FG V VAIK V I+ + E +E+ +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 62 KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+LE+V H ++H D+K ENIL+ L+R +
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILID------------LNRGE--------------L 150
Query: 261 KLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALF 318
KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+ F
Sbjct: 151 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 319 QTHENL 324
+ E +
Sbjct: 211 EHDEEI 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + L DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 38/223 (17%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGG 152
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L H I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
C + + + + + LG SL D+L ++S I L + L +Q+ E +A++
Sbjct: 99 KGCCEDAGAASLQ--LVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 150
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H IH DL N+LL + VK+ D+ L+++ +G + + D S F
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEXYRVRE-------DGDSPVF 202
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE + + Y D+WS G L EL +
Sbjct: 203 -------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 126/339 (37%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
+G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+++ +F + ++ E LG ++Y L+K S F +L ++++ H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
R+IH D+KPEN+LL S + +K+ DFG S
Sbjct: 131 KRVIHRDIKPENLLLGS---------------------------NGELKIADFGWSVHAP 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
+ + T Y PE+I G + DLWS+G + E G F+ H E +
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
RV P + GAR
Sbjct: 224 RVEFTFP------------DFVTEGAR--------------------------------- 238
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++ ++RL E L HP+ + +P+
Sbjct: 239 -----DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 64
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + + ++ Q+ +A++ +
Sbjct: 65 LVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D IK
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK------------ 170
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 171 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 51/234 (21%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
L ++G G +G V + +++A+K +RS K ++ ++++DV+ R +
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR-------SSD 79
Query: 155 CVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE--LGRQLLESVAFM 210
C I ++ +R C + +L + +D K Y S D++ E LG+ L +V +
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY-SVLDDVIPEEILGKITLATVKAL 138
Query: 211 H----ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
+ L++IH D+KP NILL +S IKL DFG
Sbjct: 139 NHLKENLKIIHRDIKPSNILL---------------------------DRSGNIKLCDFG 171
Query: 267 ST--TFEHQDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSG 314
+ + + R Y APE I G++ D+WS+G L EL +G
Sbjct: 172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 74 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 129
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH +L NIL+ + VK+ D+ +D Y+K P S I
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI------- 182
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 183 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 42/246 (17%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
L +Y++ +G G FG V VAIK V I+ + E +E+ +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 62 KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+LE+V H ++H D+K ENIL+ L+R +
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE--------------L 150
Query: 261 KLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALF 318
KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+ F
Sbjct: 151 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 319 QTHENL 324
+ E +
Sbjct: 211 EHDEEI 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD 149
+ +L +G G++ +V+ + + A+++V+ +N + ++ + V ++ + H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
+G C Q + R I + G ++ R+ R P + R ++ ++
Sbjct: 114 FLVGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLAL 166
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
++HE +I+ DLK +N+LL S ++K+ DY + G +
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----------------T 210
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
+TF T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 211 STF--------CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 42/246 (17%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
L +Y++ +G G FG V VAIK V I+ + E +E+ +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +L R
Sbjct: 62 KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
Q+LE+V H ++H D+K ENIL+ L+R +
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE--------------L 150
Query: 261 KLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALF 318
KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++ G+ F
Sbjct: 151 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 319 QTHENL 324
+ E +
Sbjct: 211 EHDEEI 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 55/276 (19%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
E YR+ +G+G FG V + VAIK++ S +E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFL-RKNSYRSFPIDLVR 197
+L ++ G +++ +WF+ + +V E+ P+ L+D++ K P R
Sbjct: 87 LLWKVGAGG-GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP---SR 142
Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
Q++ ++ H ++H D+K ENIL+ +L +
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILI-------------------------DLRRG 177
Query: 258 SAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGE 315
A KLIDFGS H + ++ TR Y PE I ++ P +WS+G +L ++ G+
Sbjct: 178 CA-KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
Query: 316 ALFQ-------------THENLEHLAMMERVLGPLP 338
F+ H + + A++ R L P P
Sbjct: 237 IPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKP 272
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 55/247 (22%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARH--- 148
R R+ + EG F V E D A+K + S + + A+I E+ +++L+ H
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS-FPIDLVRELGRQLLES 206
+ + ++ E L +FL+K R D V ++ Q +
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 207 VAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
V MH + +IH DLK EN+LL S G+ IKL D
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLL-----------------SNQGT----------IKLCD 181
Query: 265 FGS-TTFEH-QDHSYVV-------------STRHYRAPEVILGLGWNYPC----DLWSVG 305
FGS TT H D+S+ +T YR PE+I L N+P D+W++G
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALG 240
Query: 306 CILVELC 312
CIL LC
Sbjct: 241 CILYLLC 247
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ I IV E + SL DFL+ + + + ++ Q+ +A++ +
Sbjct: 75 LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL+ NIL+ KV D+ L+R +D IK
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 ----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 45/243 (18%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGTR 154
+++G G+FG V + + VA+KI++ ++ E A E+ VL++ TR
Sbjct: 42 TRIGSGSFGTV---YKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK--------TR 90
Query: 155 CVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V I + Y ++++ IV + G SLY L + F + + ++ RQ + + ++H
Sbjct: 91 HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK-DGSYFKNLPKSSAIKLIDFGSTTF 270
+IH D+K NI L VK+ D+ + S+ GS P S +
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL---------- 199
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHL 327
+ APEVI N + D++S G +L EL +GE + N + +
Sbjct: 200 -------------WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
Query: 328 AMM 330
M
Sbjct: 247 IFM 249
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 125/339 (36%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
+G+G FG V + + K ++A+K++ E A +E + +Q RH
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+++ +F + ++ E LG ++Y L+K S F +L ++++ H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
R+IH D+KPEN+LL S + +K+ DFG S
Sbjct: 131 KRVIHRDIKPENLLLGS---------------------------NGELKIADFGWSVHAP 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
+ T Y PE+I G + DLWS+G + E G F+ H E +
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
RV P + GAR
Sbjct: 224 RVEFTFP------------DFVTEGAR--------------------------------- 238
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
DL+ LL+++ ++RL E L HP+ + +P+
Sbjct: 239 -----DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
L EL Q+ + V ++H +LIH DLKP NI LV + VK+ D+ ++ DG ++
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS- 195
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
T Y +PE I + DL+++G IL EL
Sbjct: 196 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ IL +G G F +V + ++ A+KI +NK+ E+ + + G
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 154 R--CVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
R Q+ F N++ +V E +G L L K R P ++ R +++ ++ +
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H L +H D+KP+NILL ++++ D+ GS K + L+
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADF---------GSCLKLRADGTVRSLV------- 222
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNY-------PCDLWSVGCILVELCSGEALFQTHEN 323
V T Y +PE++ +G CD W++G E+ G+ F
Sbjct: 223 -------AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
Query: 324 LE 325
E
Sbjct: 276 AE 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NIL+ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 143/391 (36%), Gaps = 134/391 (34%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI-----VRSIN-KYREAAMIEIDVLQ 143
L +Y + +G+G++G V +N+ + + AIKI +R IN K E E+ +++
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR---KNSYRSFPIDLVR-- 197
+L +I ++ ++ +IC+V E G L D L +S +D+V+
Sbjct: 84 KLHHPNIA-----RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 198 ---------------------------------ELGRQLLESVAFMHELRLIHTDLKPEN 224
+ RQ+ ++ ++H + H D+KPEN
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF------EHQDHSY 277
L + KS IKL+DFG S F E+ +
Sbjct: 199 FLFSTN-------------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 278 VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
T ++ APEV+ +Y CD WS G +L HL +M V
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL-----------------HLLLMGAV-- 274
Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
P P G D++ V L ++ +++
Sbjct: 275 PFP-------------------------GVNDADTISQVLN----KKLCFENPNYNVLSP 305
Query: 396 I--DLLQGLLRYDPAERLKAREALRHPFFTR 424
+ DLL LL + ER A AL+HP+ ++
Sbjct: 306 LARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHE 322
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F + +
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 323 NLEHLAMMERVLGPLPHHMVIRAD 346
++ + + E + P H + AD
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQ 143
+GE + +S++G G G V + ++A K++ K R + E+ VL
Sbjct: 62 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 120
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
H+ V F I I E + D + K + R P ++ ++ +
Sbjct: 121 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 175
Query: 204 LESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++ E +++H D+KP NIL+ S +K+ D+ + +L
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQL 217
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
ID + +F V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 218 IDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 46/289 (15%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
+GEG FG+V C +D E E VA+K ++ + A + EI++L+ L +I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
+ + D N I ++ E L SL ++L KN + I+L ++L Q+ + + ++
Sbjct: 89 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 142
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
+ +H DL N+L+ S VK+ D+ + AI+ T
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKEXXTVK 186
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
+ +D S + APE ++ + D+WS G L EL L + +A+
Sbjct: 187 DDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALF 236
Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 377
+++GP M + R + G RL P MR W+
Sbjct: 237 LKMIGPTHGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQ 143
+GE + +S++G G G V + ++A K++ K R + E+ VL
Sbjct: 27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 85
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
H+ V F I I E + D + K + R P ++ ++ +
Sbjct: 86 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 140
Query: 204 LESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++ E +++H D+KP NIL+ S +K+ D+ + +L
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQL 182
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
ID + +F V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 183 IDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 90/243 (37%), Gaps = 61/243 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
+ + ++G G FG V+ + E VAIK R K RE +EI ++++L ++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPS------------------LYDFLRKNSYRSFPI 193
R + +KL P+ L F + PI
Sbjct: 77 SAR------------EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
R L + ++ ++HE R+IH DLKPENI+L
Sbjct: 125 ---RTLLSDISSALRYLHENRIIHRDLKPENIVLQPG----------------------- 158
Query: 254 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
P+ K+ID G Q + V T Y APE++ + D WS G + E
Sbjct: 159 -PQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 217
Query: 312 CSG 314
+G
Sbjct: 218 ITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 90/243 (37%), Gaps = 61/243 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
+ + ++G G FG V+ + E VAIK R K RE +EI ++++L ++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPS------------------LYDFLRKNSYRSFPI 193
R + +KL P+ L F + PI
Sbjct: 76 SAR------------EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
R L + ++ ++HE R+IH DLKPENI+L
Sbjct: 124 ---RTLLSDISSALRYLHENRIIHRDLKPENIVLQPG----------------------- 157
Query: 254 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
P+ K+ID G Q + V T Y APE++ + D WS G + E
Sbjct: 158 -PQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
Query: 312 CSG 314
+G
Sbjct: 217 ITG 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 46/289 (15%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
+GEG FG+V C +D E E VA+K ++ + A + EI++L+ L +I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
+ + D N I ++ E L SL ++L KN + I+L ++L Q+ + + ++
Sbjct: 77 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 130
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
+ +H DL N+L+ S VK+ D+ + AI+ T
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKEXXTVK 174
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
+ +D S + APE ++ + D+WS G L EL L + +A+
Sbjct: 175 DDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALF 224
Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 377
+++GP M + R + G RL P MR W+
Sbjct: 225 LKMIGPTHGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 41/253 (16%)
Query: 85 AIGENLTPR-----YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAA 135
IG N + R + + +G+G+FG+V+ E +L A+K+++ + E
Sbjct: 11 GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID 194
M E +L H Q+ F + + V E + G L ++K+ R F
Sbjct: 71 MTEKRILSLARNHPF----LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEA 124
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
R +++ ++ F+H+ +I+ DLK +N+LL + K+ D+ K+G
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM----CKEG------ 174
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
I G TT + T Y APE++ + + D W++G +L E+ G
Sbjct: 175 --------ICNGVTT------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 315 EALFQTHENLEHL 327
A F+ EN + L
Sbjct: 221 HAPFEA-ENEDDL 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 185
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 186 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 48/262 (18%)
Query: 66 PRTGSPPWRPDDKDGHYVFAIG--------ENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
P+T S P P D D +IG ++L P + ++G G +G V +
Sbjct: 23 PQTSSTP--PRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSG 76
Query: 118 ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP 177
+++A+K +R+ +E + +D+ ++ + V + I E +
Sbjct: 77 QIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134
Query: 178 SLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVK 234
SL F ++ + ++ P D++ ++ +++++ +H +L +IH D+KP N+L+ + VK
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 194
Query: 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---- 290
+ D+ Y + S K ID G + Y APE I
Sbjct: 195 MCDFGI-------SGYLVD----SVAKTIDAG--------------CKPYMAPERINPEL 229
Query: 291 LGLGWNYPCDLWSVGCILVELC 312
G++ D+WS+G ++EL
Sbjct: 230 NQKGYSVKSDIWSLGITMIELA 251
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 58/255 (22%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID-------VLQRLA 146
YR+ +G+G F +V K+ R + RE A+ ID LQ+L
Sbjct: 17 YRLQKTIGKGNFAKV--------------KLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 147 RHD-----IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELG 200
R + V++ + + +V E G ++D+L ++ R
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKF 120
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
RQ++ +V + H+ ++H DLK EN+LL +K+ D+ F S G+ S
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF-SNEFTVGNKLDTFCGSPP- 178
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 179 -----------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 320 THENLEHLAMMERVL 334
+NL+ L ERVL
Sbjct: 216 G-QNLKELR--ERVL 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
+GEG +V C + + A+KI+ + R E+++L + H +++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+F+ + +VFEK+ G S+ + K R F + + + ++ F+H + H
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 218 TDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
DLKPENIL VK+ D+ S +G P S+ L GS
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS---PISTPELLTPCGSA------ 185
Query: 275 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
Y APEV+ ++ CDLWS+G IL L SG F
Sbjct: 186 --------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF----------- 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLI 384
R G+ W G +++ ++ P+
Sbjct: 227 ----------------------VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD 264
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
H+ +A DLI LL D +RL A + L+HP+
Sbjct: 265 WAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDV 141
A+GE + +S++G G G V + ++A K++ K R + E+ V
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
L H+ V F I I E + D + K + R P ++ ++
Sbjct: 61 L-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSI 114
Query: 202 QLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
+++ + ++ E +++H D+KP NIL+ S +K+ D+ +
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SG 156
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+LID + F V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 157 QLIDEMANEF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
++ + +G G FGQV + + IK V+ N E A E+ L +L +I
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNI--V 67
Query: 154 RCVQIRNWFDY----------RNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVREL 199
+ FDY R+ +F ++ +L ++ K L EL
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+ + V ++H +LI+ DLKP NI LV + VK+ D+ ++ DG ++
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS------ 181
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
T Y +PE I + DL+++G IL EL
Sbjct: 182 -------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 74 RPDDKDGHYVFAIGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
+P DKD + PR +++ ++G G FG+V + N + VA+K ++
Sbjct: 1 KPWDKDAWEI--------PRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS 51
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRS 190
+A + E ++++ L +HD + V++ I I+ E + SL DFL+ +
Sbjct: 52 VQAFLEEANLMKTL-QHD----KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK 106
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
+ + + Q+ E +A++ IH DL+ N+L+ + K+ D+ L+R +D Y
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEY 165
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
IK + APE I + D+WS G +L E
Sbjct: 166 TAREGAKFPIK----------------------WTAPEAINFGCFTIKSDVWSFGILLYE 203
Query: 311 LCS 313
+ +
Sbjct: 204 IVT 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
+GEG +V C + + A+KI+ + R E+++L + H +++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+F+ + +VFEK+ G S+ + K R F + + + ++ F+H + H
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 218 TDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
DLKPENIL VK+ D+ S +G P S+ L GS
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS---PISTPELLTPCGSA------ 185
Query: 275 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
Y APEV+ ++ CDLWS+G IL L SG F
Sbjct: 186 --------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF----------- 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLI 384
R G+ W G +++ ++ P+
Sbjct: 227 ----------------------VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD 264
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
H+ +A DLI LL D +RL A + L+HP+
Sbjct: 265 WAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 91 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLV 196
L ++ I V + F+ + +C+V + +Y+ N P +
Sbjct: 239 LAKVHSRFI-----VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
Q++ + +H+ +I+ DLKPEN+LL V++ D
Sbjct: 294 YT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL---------------- 335
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
A++L + T + T + APE++LG +++ D +++G L E+ +
Sbjct: 336 --AVELKAGQTKTKGY------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 317 LFQTH-ENLEHLAMMERVL 334
F+ E +E+ + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 79 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 134
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 187
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 188 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 78 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 133
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 186
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 187 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 104 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 159
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 212
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 213 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 80 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 135
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 189 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQ 143
+GE + +S++G G G V + ++A K++ K R + E+ VL
Sbjct: 19 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 77
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
H+ V F I I E + D + K + R P ++ ++ +
Sbjct: 78 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 132
Query: 204 LESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
++ + ++ E +++H D+KP NIL+ S +K+ D+ + +L
Sbjct: 133 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQL 174
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
ID + +F V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 175 IDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLV 196
L ++ I V + F+ + +C+V + +Y+ N P +
Sbjct: 239 LAKVHSRFI-----VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
Q++ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 294 YT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG-------- 342
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
+ + Y T + APE++LG +++ D +++G L E+ +
Sbjct: 343 --------------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 317 LFQTH-ENLEHLAMMERVL 334
F+ E +E+ + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 91 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 49/234 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
G R I+ F +F+++ P + P + QL+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 116
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V ++H + + H D+KPEN+LL + +K+ D+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-------------------------- 150
Query: 267 STTFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
+T F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLV 196
L ++ I V + F+ + +C+V + +Y+ N P +
Sbjct: 239 LAKVHSRFI-----VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
Q++ + +H+ +I+ DLKPEN+LL V++ D
Sbjct: 294 YT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL---------------- 335
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
A++L + T + T + APE++LG +++ D +++G L E+ +
Sbjct: 336 --AVELKAGQTKTKGY------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 317 LFQTH-ENLEHLAMMERVL 334
F+ E +E+ + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 71 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 126
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 179
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 180 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 49/234 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 67
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
G R I+ F +F+++ P + P + QL+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V ++H + + H D+KPEN+LL + +K+ D+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-------------------------- 151
Query: 267 STTFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
+T F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 152 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLV 196
L ++ I V + F+ + +C+V + +Y+ N P +
Sbjct: 239 LAKVHSRFI-----VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
Q++ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 294 YT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG-------- 342
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
+ + Y T + APE++LG +++ D +++G L E+ +
Sbjct: 343 --------------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 317 LFQTH-ENLEHLAMMERVL 334
F+ E +E+ + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 72 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 180
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 181 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
+ L +G+G+FG+V+ +EL AIKI++ + E M+E VL L +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
Q+ + F + + V E + G +Y + ++ P + ++ +
Sbjct: 81 F----LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-PQAVF--YAAEISIGL 133
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+H+ +I+ DLK +N++L S ++K+ D+ D G
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GV 175
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
TT E T Y APE+I + D W+ G +L E+ +G+ F + E
Sbjct: 176 TTRE------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+K+ R I L+ + Q+ + +
Sbjct: 77 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 185
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 186 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+++ K+G G FG+V + N + VA+K ++ +A + E ++++ L +HD +
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHD----K 68
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
V++ I I+ E + SL DFL+ + + + + Q+ E +A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
IH DL+ N+L+ + K+ D+ L+R +D Y IK
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + ++WS G +L E+ +
Sbjct: 176 ----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 49/234 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
G R I+ F +F+++ P + P + QL+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 116
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V ++H + + H D+KPEN+LL + +K+ D+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-------------------------- 150
Query: 267 STTFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
+T F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIG 151
+ +S++G G G V + ++A K++ K R + E+ VL H+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V F I I E + D + K + R P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 212 EL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +++H D+KP NIL+ S +K+ D+ + +LID + +F
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF 163
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 164 --------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
V + + + ++ E L +FLR R DL +E GR
Sbjct: 103 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 157
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+K + APE I + D+WS G +L E+ S
Sbjct: 218 VK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG+V D + A+K VR + +R V + +A + R V +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 129
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ I E L G SL +++ P D Q LE + ++H R++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
D+K +N+LL S DGS L DFG D
Sbjct: 188 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 221
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
Y+ T + APEV++G + D+WS C+++ + +G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + IV + G SLY L + + F + + ++ RQ + ++H +
Sbjct: 83 LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 184
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 185 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 47/239 (19%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEK----LGPSLY-----DFLRKNSYRSFPID 194
G + I + Y + + + K LGPSL + L K R +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
+ Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+K + APE I + D+WS G +L E+ S
Sbjct: 219 NARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
V + + + ++ E L +FLR R DL +E GR
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 165
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+K + APE I + D+WS G +L E+ S
Sbjct: 226 VK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + + F + + ++ RQ + ++H +
Sbjct: 83 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 184
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 185 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIG 151
+ +S++G G G V + ++A K++ K R + E+ VL H+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V F I I E + D + K + R P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 212 EL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +++H D+KP NIL+ S +K+ D+ + +LID + +F
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF 163
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 164 --------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIG 151
+ +S++G G G V + ++A K++ K R + E+ VL H+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V F I I E + D + K + R P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 212 EL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +++H D+KP NIL+ S +K+ D+ + +LID + +F
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF 163
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 164 --------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG+V D + A+K VR + +R V + +A + R V +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 115
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ I E L G SL +++ P D Q LE + ++H R++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
D+K +N+LL S DGS L DFG D
Sbjct: 174 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 207
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
Y+ T + APEV++G + D+WS C+++ + +G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG+V D + A+K VR + +R V + +A + R V +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 131
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
+ I E L G SL +++ P D Q LE + ++H R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
D+K +N+LL S DGS L DFG D
Sbjct: 190 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 223
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
Y+ T + APEV++G + D+WS C+++ + +G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 63
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 64 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 117
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 151
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 152 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y++ ++GEG+FG + E + + VAIK + R + ++ R + G
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG-- 64
Query: 154 RCVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
C I N + + H +V + LGPSL D L R F + V +Q+L V +
Sbjct: 65 -CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 122
Query: 211 HELRLIHTDLKPENILL 227
HE L++ D+KP+N L+
Sbjct: 123 HEKSLVYRDIKPDNFLI 139
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIG 151
+ +S++G G G V + ++A K++ K R + E+ VL H+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V F I I E + D + K + R P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 212 EL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +++H D+KP NIL+ S +K+ D+ + +LID + +F
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF 163
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 164 --------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIG 151
+ +S++G G G V + ++A K++ K R + E+ VL H+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
V F I I E + D + K + R P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 212 EL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +++H D+KP NIL+ S +K+ D+ + +LID + +F
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF 163
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
V TR Y +PE + G ++ D+WS+G LVE+ G
Sbjct: 164 --------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
Y++ ++GEG+FG + E + + VAIK + R + ++ R + G
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG-- 63
Query: 154 RCVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
C I N + + H +V + LGPSL D L R F + V +Q+L V +
Sbjct: 64 -CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 121
Query: 211 HELRLIHTDLKPENILL 227
HE L++ D+KP+N L+
Sbjct: 122 HEKSLVYRDIKPDNFLI 138
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V F + VA+K R I++ E E + L +I R
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 155 CVQIRNWFDYRNHICIV--FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
V ++ ++C+V F + GP R S + P D++ Q+ + ++H+
Sbjct: 73 GVCLK-----EPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 213 ---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
+ +IH DLK NIL++ + ++G + +K+ DFG
Sbjct: 124 EAIVPIIHRDLKSSNILIL--------------QKVENGDLSNKI-----LKITDFGLAR 164
Query: 270 FEHQDHSYVVSTRH-YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL--EH 326
H+ + + + APEVI ++ D+WS G +L EL +GE F+ + L +
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 327 LAMMERVLGPLP 338
M ++ P+P
Sbjct: 225 GVAMNKLALPIP 236
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL D+L+ ++ R I L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 70
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + + F + + ++ RQ + ++H +
Sbjct: 71 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 129
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 172
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 173 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 95 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 196
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 197 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G FG + F K E A +V+ + E+ QR+A+ D C++
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKD-----CIKK 98
Query: 159 ---RNWFDY----------------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
R DY R++ +V E+LG L +N +F V +L
Sbjct: 99 WIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQL 156
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILL--VSAEYVKVPDYKFLSRSSKDGSY--FKNLP 255
G ++L+ + ++HE +H D+K N+LL + + V + DY R +G++ ++ P
Sbjct: 157 GIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENP 216
Query: 256 KSSAIKLIDFGS 267
+ I+F S
Sbjct: 217 RKGHNGTIEFTS 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
++H DLKP N+ L + VK+ D+ + D S+ K TF
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----------------TF---- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG +G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 86
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 87 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 145
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 188
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 189 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 90/341 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
+ I +G+G FG V + + +VA+K++ +E EI++ L +
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
I +++ N+F R I ++ E P LY L+K+ +F + +L +++
Sbjct: 85 I-----LRLYNYFYDRRRIYLILE-YAPRGELYKELQKSC--TFDEQRTATIMEELADAL 136
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
+ H ++IH D+KPEN+LL +K+ D+ + + +L + + +D
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGLKGELKIADFGW-------SVHAPSLRRKTMCGTLD--- 186
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
Y PE+I G N DLW +G + EL G F++ + E
Sbjct: 187 ----------------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE-- 228
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
+RR ++D L+ P +
Sbjct: 229 ------------------------TYRRIVKVD-----------------LKFPASVPTG 247
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
DL+ LLR++P+ERL + HP+ + RR
Sbjct: 248 AQ-------DLISKLLRHNPSERLPLAQVSAHPWVRANSRR 281
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 137/349 (39%), Gaps = 77/349 (22%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+NL +IL G G+ G VV + + VA+K R + + + A++EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
H ++ C + + F Y I E +L D + + + L +E L R
Sbjct: 68 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
Q+ VA +H L++IH DLKP+NIL+ ++ +F + + L +
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 175
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWSVGCILVELCS 313
K +D G ++F + + T +RAPE++ D++S+GC+ + S
Sbjct: 176 KKLDSGQSSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G P +KY R + G S D M+
Sbjct: 235 K--------------------GKHPF---------GDKYSRESNII---RGIFSLDEMKC 262
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ H + DL+ ++ +DP +R A + LRHP F
Sbjct: 263 L------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGG 152
+GEG FG+V + C+D + E+VA+K ++ + R EI++L+ L H +
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
C + + + + + + LG SL D+L ++ + L +Q+ E +A++H
Sbjct: 77 KGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
IH L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF-- 180
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
+ APE + + Y D+WS G L EL L N
Sbjct: 181 -----------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTE 224
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
++G M + R + RG RL PD
Sbjct: 225 LIGHTQGQMTV---LRLTELLERGERLPRPD 252
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGG 152
+GEG FG+V + C+D + E+VA+K ++ + R EI++L+ L H +
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
C + + + + + + LG SL D+L ++ + L +Q+ E +A++H
Sbjct: 76 KGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
IH L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF-- 179
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
+ APE + + Y D+WS G L EL L N
Sbjct: 180 -----------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTE 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
++G M + R + RG RL PD
Sbjct: 224 LIGHTQGQMTV---LRLTELLERGERLPRPD 251
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 40/242 (16%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
++ P +R+ K+G G FG++ + E VAIK+ I +E ++L+
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLS-- 57
Query: 149 DIGGTRCV-QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
T V Q+ + + +V E LGPSL D R+F + V + QL+ +
Sbjct: 58 ---ATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRM 113
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
++H LI+ D+KPEN L V P K + AI +IDFG
Sbjct: 114 EYVHTKSLIYRDVKPENFL------VGRPGTK----------------RQHAIHIIDFGL 151
Query: 267 ---------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
+++H + T Y + LG + DL ++G + + G
Sbjct: 152 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 211
Query: 318 FQ 319
+Q
Sbjct: 212 WQ 213
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 135/345 (39%), Gaps = 73/345 (21%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+NL +IL G G+ G VV + + VA+K R + + + A++EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
H ++ C + + F Y I E +L D + + + L +E L R
Sbjct: 86 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
Q+ VA +H L++IH DLKP+NIL+ ++ +F + + L +
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 193
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGEAL 317
K +D G F + + T +RAPE++ D++S+GC+ + S
Sbjct: 194 KKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK--- 249
Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
G P +KY R + G S D M+ +
Sbjct: 250 -----------------GKHPF---------GDKYSRESNII---RGIFSLDEMKCL--- 277
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
H + DL+ ++ +DP +R A + LRHP F
Sbjct: 278 ---------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 135/345 (39%), Gaps = 73/345 (21%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+NL +IL G G+ G VV + + VA+K R + + + A++EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
H ++ C + + F Y I E +L D + + + L +E L R
Sbjct: 86 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
Q+ VA +H L++IH DLKP+NIL+ ++ +F + + L +
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 193
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGEAL 317
K +D G F + + T +RAPE++ D++S+GC+ + S
Sbjct: 194 KKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK--- 249
Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
G P +KY R + G S D M+ +
Sbjct: 250 -----------------GKHPF---------GDKYSRESNII---RGIFSLDEMKCL--- 277
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
H + DL+ ++ +DP +R A + LRHP F
Sbjct: 278 ---------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
++H DLKP N+ L + VK+ D+ + D S+ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 28/233 (12%)
Query: 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
P +R+ K+G G FG++ + E VAIK+ + ++ ++ + R +
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 63
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
G Q+ + + +V E LGPSL D R+F + V + QL+ + ++H
Sbjct: 64 GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 122
Query: 212 ELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
LI+ D+KPEN L+ + + + + D+ L++ D K++P
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------- 170
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
+++H + T Y + LG + DL ++G + + G +Q
Sbjct: 171 -----YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 67 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 95 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 196
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 197 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENV 67
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
G R I+ F +F+++ P + P + QL+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
V ++H + + H D+KPEN+LL + +K+ D+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-------------------------- 151
Query: 267 STTFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
+T F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 48/238 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHD 149
Y ++ +G G FG+V +++ A+K++ K ++A E D++
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 125
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
VQ+ F ++ +V E + G L + + S P R +++ ++
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALD 182
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H + IH D+KP+N+LL KS +KL DFG+
Sbjct: 183 AIHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTC 215
Query: 269 TFEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
+++ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 48/238 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHD 149
Y ++ +G G FG+V +++ A+K++ K ++A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
VQ+ F ++ +V E + G L + + S P R +++ ++
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALD 187
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H + IH D+KP+N+LL KS +KL DFG+
Sbjct: 188 AIHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTC 220
Query: 269 TFEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
+++ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
+ L +G+G+FG+V+ EL A+KI++ + E M+E VL +
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRS-FPIDLVRELGRQLLES 206
Q+ + F + + V E + G +Y + ++ + E+ L
Sbjct: 403 F----LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF-- 456
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
F+ +I+ DLK +N++L S ++K+ D+ + DG K
Sbjct: 457 --FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF------------ 502
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
T Y APE+I + D W+ G +L E+ +G+A F+ + E
Sbjct: 503 ------------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
+ L +G+G+FG+V+ EL A+KI++ + E M+E VL +
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRS-FPIDLVRELGRQLLES 206
Q+ + F + + V E + G +Y + ++ + E+ L
Sbjct: 82 F----LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF-- 135
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
F+ +I+ DLK +N++L S ++K+ D+ + DG K
Sbjct: 136 --FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF------------ 181
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
T Y APE+I + D W+ G +L E+ +G+A F+ + E
Sbjct: 182 ------------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 93
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 94 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 152
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 195
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 196 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 28 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 81
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y ++ ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 187 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Query: 331 ERVLGP 336
R+ P
Sbjct: 238 LRLYRP 243
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 28/233 (12%)
Query: 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
P +R+ K+G G FG++ + E VAIK+ + ++ ++ + R +
Sbjct: 30 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
G Q+ + + +V E LGPSL D R+F + V + QL+ + ++H
Sbjct: 85 GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 143
Query: 212 ELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
LI+ D+KPEN L+ + + + + D+ L++ D K++P
Sbjct: 144 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------- 191
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
+++H + T Y + LG + DL ++G + + G +Q
Sbjct: 192 -----YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI 139
G V +G P +R+ K+G G FG++ + E VAIK+ + ++ ++
Sbjct: 1 GSGVLMVG----PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQL 51
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
+ R + G Q+ + + +V E LGPSL D R+F + V +
Sbjct: 52 HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 110
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNL 254
QL+ + ++H LI+ D+KPEN L+ + + + + D+ L++ D K++
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFG-LAKEYIDPETKKHI 169
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
P +++H + T Y + LG + DL ++G + + G
Sbjct: 170 P----------------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213
Query: 315 EALFQ 319
+Q
Sbjct: 214 SLPWQ 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 48/238 (20%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHD 149
Y ++ +G G FG+V +++ A+K++ K ++A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
VQ+ F ++ +V E + G L + + S P R +++ ++
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALD 187
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H + IH D+KP+N+LL KS +KL DFG+
Sbjct: 188 AIHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTC 220
Query: 269 TFEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
+++ V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 19 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 72
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y ++ ++
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 178 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
Query: 331 ERVLGP 336
R+ P
Sbjct: 229 LRLYRP 234
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + V + R ++ ++ E L SL ++L+K+ R I L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
++ R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ APE + ++ D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 68
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 69 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 127
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 170
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 171 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 45/232 (19%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
+ ++ +GEG G+V + +E VA+KIV I+ ++ + ++ H+
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ ++ +R I + L G L+D + + P + QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++H + + H D+KPEN+LL + +K+ D+ +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
F + + +++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 72 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 173
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 174 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 38/248 (15%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK ++S K R + E ++ + +
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ + + + I+ E + SL FLR+N + I LV L R + +
Sbjct: 96 V-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAAGMK 149
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++ ++ +H DL NIL+ S KV D+ +FL + D +Y L I+
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---- 205
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
+ APE I + D+WS G ++ E+ S GE + N
Sbjct: 206 ------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 325 EHLAMMER 332
+ + +E+
Sbjct: 248 DVINAIEQ 255
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 12 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 65
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y ++ ++
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 170
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 171 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
Query: 331 ERVLGP 336
R+ P
Sbjct: 222 LRLYRP 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 67 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 72 LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 173
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 174 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 13 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 66
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y ++ ++
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 171
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 172 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Query: 331 ERVLGP 336
R+ P
Sbjct: 223 LRLYRP 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
++G G+FG V + + + + + + +A E+ VL++ TR V I
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
+ Y + IV + G SLY L + I L+ ++ RQ + + ++H +
Sbjct: 67 LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
IH DLK NI L VK+ D+ + S+ GS FE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
S + + APEVI N + D+++ G +L EL +G+ + N + + M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 77/349 (22%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+NL +IL G G+ G VV + + VA+K R + + + A++EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
H ++ C + + F Y I E +L D + + + L +E L R
Sbjct: 68 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
Q+ VA +H L++IH DLKP+NIL+ ++ +F + + L +
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 175
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWSVGCILVELCS 313
K +D G F ++ T +RAPE++ D++S+GC+ + S
Sbjct: 176 KKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
G P +KY R + G S D M+
Sbjct: 235 K--------------------GKHPF---------GDKYSRESNII---RGIFSLDEMKC 262
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
+ H + DL+ ++ +DP +R A + LRHP F
Sbjct: 263 L------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDI 150
Y ++ +G G FG+V +++ A+K++ I + A E + A
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 133
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
VQ+ F ++ +V E + D + S P + +++ ++ +
Sbjct: 134 -SPWVVQLFCAFQDDKYLYMVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H + LIH D+KP+N+LL ++K+ D+ + +K+ + G
Sbjct: 191 HSMGLIHRDVKPDNMLLDKHGHLKLADF------------------GTCMKMDETGMV-- 230
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
H D + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 231 -HCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 90 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKEAPED 141
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD Y + +K + APE I + D+WS G
Sbjct: 202 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 239
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 240 VLLWEIFS 247
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 8 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 61
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y ++ ++
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 166
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 167 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
Query: 331 ERVLGP 336
R+ P
Sbjct: 218 LRLYRP 223
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
+ ++G G FG +V K+ VAIK +R E + E +V+ +L+ +
Sbjct: 11 FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 64
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + IC+VFE + L D+LR F + + + + E +A++ E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 169
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
++H DLKP N+ L + VK+ D+ + D + K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
+KMGEG FG V + + N VA+K + AAM++I ++ Q+ + +
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
C V++ + + +C+V+ + SL D L + + ++ + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
T S +V T Y APE + G D++S G +L+E+ +G
Sbjct: 189 TVMX----SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G G FG++ + E VAIK+ I +E ++L G
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGS---AGEG 58
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
Q+ + + +V E LGPSL D R+F + V + QLL + ++H
Sbjct: 59 LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------- 266
LI+ D+KPEN L+ + G+ K I +IDFG
Sbjct: 118 LIYRDVKPENFLI-----------------GRQGN-----KKEHVIHIIDFGLAKEYIDP 155
Query: 267 --STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
+++H + T Y + LG + DL ++G + + G +Q
Sbjct: 156 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
V + + + ++ E L +FLR+ S +F I DL+
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+K + APE I + D+WS G +L E+ S
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPID 194
+E+ +L++++ G + +++ +WF+ + ++ E+ P L+DF+ + + +
Sbjct: 103 MEVVLLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEE 157
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 158 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE--------- 196
Query: 255 PKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELC 312
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 197 -----LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 313 SGEALFQTHENL 324
G+ F+ E +
Sbjct: 252 CGDIPFEHDEEI 263
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
V + + + ++ E L +FLR+ S +F I DL+
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+K + APE I + D+WS G +L E+ S
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 88 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD Y + +K + APE I + D+WS G
Sbjct: 200 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 108/318 (33%), Gaps = 87/318 (27%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLR 184
L H IGG V I + Y R + K P++ +
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
+ Q+ + +AF+ IH DL NILL K+
Sbjct: 163 LALDLE----DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI--------- 209
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPC 299
DFG D +YVV + APE I + +
Sbjct: 210 ------------------CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
D+WS G L EL S LG P+ + D + K + G R+
Sbjct: 252 DVWSYGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRM 290
Query: 360 DWPDGATSR--DSMRAVW 375
P+ A + D M+ W
Sbjct: 291 LSPEHAPAEMYDIMKTCW 308
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 13 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL----- 66
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D Y + ++
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSRGSKFPVR------------- 171
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 172 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Query: 331 ERVLGP 336
R+ P
Sbjct: 223 LRLYRP 228
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
I R V ++ R + +V E L PS L DFL+++ R +D R L Q+ +
Sbjct: 73 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
+ ++ R +H DL NIL+ S +VK+ D+ D Y+ P S I
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 181
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
+ APE + ++ D+WS G +L EL CS A
Sbjct: 182 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 223
Query: 318 F 318
F
Sbjct: 224 F 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 125 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 176
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD Y + +K + APE I + D+WS G
Sbjct: 237 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 274
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 275 VLLWEIFS 282
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 37 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 143 QRLARH----------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLR 184
L H IGG V I + Y R + K P++ +
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
+ Q+ + +AF+ IH DL NILL K+ D+ L+R
Sbjct: 156 LALDLE----DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARD 210
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPC 299
K+ D +YVV + APE I + +
Sbjct: 211 IKN--------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFES 244
Query: 300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
D+WS G L EL S LG P+ + D + K + G R+
Sbjct: 245 DVWSYGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRM 283
Query: 360 DWPDGATSR--DSMRAVW 375
P+ A + D M+ W
Sbjct: 284 LSPEHAPAEMYDIMKTCW 301
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 143 QRLARH----------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLR 184
L H IGG V I + Y R + K P++ +
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
+ Q+ + +AF+ IH DL NILL K+ D+ L+R
Sbjct: 140 LALDLE----DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARD 194
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPC 299
K+ D +YVV + APE I + +
Sbjct: 195 IKN--------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFES 228
Query: 300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
D+WS G L EL S LG P+ + D + K + G R+
Sbjct: 229 DVWSYGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRM 267
Query: 360 DWPDGATSR--DSMRAVW 375
P+ A + D M+ W
Sbjct: 268 LSPEHAPAEMYDIMKTCW 285
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
I R V ++ R + +V E L PS L DFL+++ R +D R L Q+ +
Sbjct: 74 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
+ ++ R +H DL NIL+ S +VK+ D+ D Y+ P S I
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 182
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
+ APE + ++ D+WS G +L EL CS A
Sbjct: 183 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 224
Query: 318 F 318
F
Sbjct: 225 F 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
+ ++G G FG +V K+ VAIK +R E + E +V+ +L+ +
Sbjct: 14 FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 67
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + IC+VFE + L D+LR F + + + + E +A++ E
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 172
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 173 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
I R V ++ R + +V E L PS L DFL+++ R +D R L Q+ +
Sbjct: 86 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
+ ++ R +H DL NIL+ S +VK+ D+ D Y+ P S I
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 194
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
+ APE + ++ D+WS G +L EL CS A
Sbjct: 195 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 318 F 318
F
Sbjct: 237 F 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLR 184
L H IGG V I + Y R + K P++ +
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
+ Q+ + +AF+ IH DL NILL K+ D+ L+R
Sbjct: 163 LALDLE----DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARD 217
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPC 299
K+ D +YVV + APE I + +
Sbjct: 218 IKN--------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
D+WS G L EL S LG P+ + D + K + G R+
Sbjct: 252 DVWSYGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRM 290
Query: 360 DWPDGATSR--DSMRAVW 375
P+ A + D M+ W
Sbjct: 291 LSPEHAPAEMYDIMKTCW 308
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 39 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 143 QRLARH----------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLR 184
L H IGG V I + Y R + K P++ +
Sbjct: 99 SYLGNHMNIVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
+ Q+ + +AF+ IH DL NILL K+ D+ L+R
Sbjct: 158 LALDLE----DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARD 212
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPC 299
K+ D +YVV + APE I + +
Sbjct: 213 IKN--------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFES 246
Query: 300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
D+WS G L EL S LG P+ + D + K + G R+
Sbjct: 247 DVWSYGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRM 285
Query: 360 DWPDGATSR--DSMRAVW 375
P+ A + D M+ W
Sbjct: 286 LSPEHAPAEMYDIMKTCW 303
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSH-----PK 63
Query: 155 CVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ + IC+VFE + L D+LR F + + + + E +A++ E
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------ 169
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 ----------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 38/248 (15%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +K+ VAIK ++ + R + E ++ + +
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I +++ + I+ E + +L FLR N + I LV L R + +
Sbjct: 77 I-----IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGMR 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++ E+ +H DL NIL+ S KV D+ +FL +S D +Y +L I+
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR---- 186
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
+ APE I + D WS G ++ E+ S GE + N
Sbjct: 187 ------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
Query: 325 EHLAMMER 332
+ + +E+
Sbjct: 229 DVINAIEQ 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 85 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
+ ++G G FG +V K+ VAIK +R E + E +V+ +L+ +
Sbjct: 9 FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 62
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + IC+VFE + L D+LR F + + + + E +A++ E
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 167
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 168 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
+KMGEG FG V + + N VA+K + AAM++I ++ Q+ + +
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
C V++ + + +C+V+ + SL D L + + ++ + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
T + +V T Y APE + G D++S G +L+E+ +G
Sbjct: 189 TVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 53/246 (21%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
H ++ G C + C K G +L +LR Y+ P DL
Sbjct: 79 GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
++ Q+ + + F+ + IH DL NILL VK+ D+ KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
Y + +K + APE I + D+WS G +
Sbjct: 193 PDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
L E+ S
Sbjct: 231 LWEIFS 236
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 111/295 (37%), Gaps = 70/295 (23%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR---------KNSYRSF- 191
H ++ G C + + + F K G +L +LR K+ Y+ F
Sbjct: 88 GHHLNVVNLLGA-CTKPGGPL----MVIVEFCKFG-NLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
++ + Q+ + + F+ + IH DL NILL VK+ D+ KD Y
Sbjct: 142 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYV 201
Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ +K + APE I + D+WS G +L E+
Sbjct: 202 RKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 239
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 366
S LG P+ V + D + + G R+ PD T
Sbjct: 240 FS--------------------LGASPYPGV-KIDEEFXRRLKEGTRMRAPDYTT 273
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
++G G FG V + + KK + + + N+ + A+ E +V+Q+L I
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 433
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
R + I +W + + +LGP L +L++N R + EL Q+ + ++
Sbjct: 434 RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 485
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 486 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----------------- 528
Query: 271 EHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328
Q H + V + APE I ++ D+WS G ++ E S G+ ++ + E A
Sbjct: 529 --QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
Query: 329 MMER 332
M+E+
Sbjct: 584 MLEK 587
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
++G G FG V + + KK + + + N+ + A+ E +V+Q+L I
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 434
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
R + I +W + + +LGP L +L++N R + EL Q+ + ++
Sbjct: 435 RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 486
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 487 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----------------- 529
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329
Q H + APE I ++ D+WS G ++ E S G+ ++ + E AM
Sbjct: 530 --QTHGKWPVK--WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 585
Query: 330 MER 332
+E+
Sbjct: 586 LEK 588
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQR 144
L +Y + +GEG++G+V E D+E ++ + +K + A + EI +L+R
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 145 LARHDIGGTRCVQIRN--WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
L ++ +Q+ + + + + + +V E + + L + FP+ Q
Sbjct: 63 LRHKNV-----IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
L++ + ++H ++H D+KP N+LL + +K+ L + A+
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKI----------------SALGVAEALHP 161
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW--NYPCDLWSVGCILVELCSGEALFQ 319
T Q + ++ PE+ GL + D+WS G L + +G F+
Sbjct: 162 FAADDTCRTSQ------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 395 LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
L DLL+G+L Y+PA+R R+ +H +F +
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
+G G FG+V C + ++ A+K + + + A+ E +L ++ D C
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ F + + + + + G L+ L ++ F +R +++ + MH
Sbjct: 256 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 311
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+++ DLKP NILL +V++ D + K P +S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 349
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
V T Y APEV+ G+ ++ D +S+GC+L +L G + F+ H+
Sbjct: 350 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
+G G FG+V C + ++ A+K + + + A+ E +L ++ D C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ F + + + + + G L+ L ++ F +R +++ + MH
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+++ DLKP NILL +V++ D + K P +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
V T Y APEV+ G+ ++ D +S+GC+L +L G + F+ H+
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 53/246 (21%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
H ++ G C + C K G +L +LR Y+ P DL
Sbjct: 79 GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
++ Q+ + + F+ + IH DL NILL VK+ D+ KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
Y + +K + APE I + D+WS G +
Sbjct: 193 PDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
L E+ S
Sbjct: 231 LWEIFS 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 81 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR + G T H +
Sbjct: 137 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 176
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ + APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 177 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 234 RPEGCPEKVYELMRA 248
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
+G+G FGQ ++ E E++ +K ++R + + + E+ V++ L ++ V
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
++ + + E + + K+ +P + + +A++H + +IH
Sbjct: 78 KD-----KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS-SAIKLIDFGSTTFEHQDHSY 277
DL N L+ + V V D+ L+R D K P+ ++K D +
Sbjct: 133 DLNSHNCLVRENKNVVVADFG-LARLMVDE---KTQPEGLRSLKKPD-------RKKRYT 181
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
VV ++ APE+I G ++ D++S G +L E+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
+G G FG+V C + ++ A+K + + + A+ E +L ++ D C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ F + + + + + G L+ L ++ F +R +++ + MH
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+++ DLKP NILL +V++ D + K P +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
V T Y APEV+ G+ ++ D +S+GC+L +L G + F+ H+
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
+G G FG+V C + ++ A+K + + + A+ E +L ++ D C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ F + + + + + G L+ L ++ F +R +++ + MH
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+++ DLKP NILL +V++ D + K P +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
V T Y APEV+ G+ ++ D +S+GC+L +L G + F+ H+
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 65/289 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L RH +
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 247
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
VQ+ + + + IV E + SL D+LR D + + + E++ ++
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+H DL N+L+ KV D+ +S K LP
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 351
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
+ APE + ++ D+WS G +L E+ S
Sbjct: 352 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS------------------- 381
Query: 333 VLGPLPHHMVIRADR--RAEKYFRRGARLDWPDGA--TSRDSMRAVWKL 377
G +P+ + D R EK G ++D PDG D M+ W L
Sbjct: 382 -FGRVPYPRIPLKDVVPRVEK----GYKMDAPDGCPPAVYDVMKNCWHL 425
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 99 KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
++G G FG V + + KK++ VAIK+++ E A E + + H + V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIV 73
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
++ + ++ G L+ FL P+ V EL Q+ + ++ E +
Sbjct: 74 RLIGVCQAEALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
H DL N+LLV+ Y K+ D+ D SY+ SA K
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY---TARSAGKW-------------- 175
Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I ++ D+WS G + E S G+ ++ + E +A +E+
Sbjct: 176 ----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 122/319 (38%), Gaps = 69/319 (21%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYR 132
K GH+ GE + +L ++G+G+FG V E E + VA+K V R
Sbjct: 2 KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 133 E--AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR----- 184
E + E V++ H + V++ +V E + L +LR
Sbjct: 62 ERIEFLNEASVMKGFTCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 116
Query: 185 --KNSYRSFP-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
N R P + + ++ ++ + +A+++ + +H DL N ++ VK+ D+ +
Sbjct: 117 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-M 175
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R + Y++ K ++ R + APE + + D+
Sbjct: 176 TRDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDM 214
Query: 302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
WS G +L E+ S E +Q N E+VL K+ G LD
Sbjct: 215 WSFGVVLWEITSLAEQPYQGLSN-------EQVL----------------KFVMDGGYLD 251
Query: 361 WPDGATSR--DSMRAVWKL 377
PD R D MR W+
Sbjct: 252 QPDNCPERVTDLMRMCWQF 270
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
L ++G G FG VV+ + VAIK+++ + + + E V+ L+ +
Sbjct: 28 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 81
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + I I+ E + L ++LR+ +R F + E+ + + E++ ++ +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N L+ VKV D+ LSR D ++ ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEETSSVGSKFPVR------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
+ PEV++ ++ D+W+ G ++ E+ S + F E EH+A
Sbjct: 187 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Query: 331 ERVLGP 336
R+ P
Sbjct: 238 LRLYRP 243
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 99 KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
++G G FG V + + KK++ VAIK+++ E A E + + H + V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIV 399
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
++ + ++ G L+ FL P+ V EL Q+ + ++ E +
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
H +L N+LLV+ Y K+ D+ D SY+ SA K
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGKW-------------- 501
Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
+ APE I ++ D+WS G + E S G+ ++ + E +A +E+
Sbjct: 502 ----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 40/232 (17%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEKLGPSL-YDF-LRKNSYRSFPIDLVRELGR 201
G + I + Y + + + K P L Y + N +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G +L E+ S
Sbjct: 234 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
+ ++G G FG V + + N+ K VAIK ++ + + + E +V+ +L+ +
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIKEGSMSEDDFIEEAEVMMKLSH-----PK 83
Query: 155 CVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
VQ+ + IC+VFE + L D+LR F + + + + E +A++ E
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------ 189
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 190 ----------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
A+ T + L K+G G FG V +C + AIK RS K ++ E + L+
Sbjct: 2 AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALRE 58
Query: 145 LARHDIGGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------D 194
+ H + G +R + + +H+ I E G SL D + +N YR D
Sbjct: 59 VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKD 117
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
L+ ++GR L ++H + L+H D+KP NI +
Sbjct: 118 LLLQVGRGL----RYIHSMSLVHMDIKPSNIFI 146
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK ++S K R + E ++ + +
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
+ + + + I+ E + SL FLR+N + I LV L R + +
Sbjct: 70 V-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAAGMK 123
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++ ++ +H L NIL+ S KV D+ +FL + D +Y L I+
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---- 179
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
+ APE I + D+WS G ++ E+ S GE + N
Sbjct: 180 ------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 325 EHLAMMER 332
+ + +E+
Sbjct: 222 DVINAIEQ 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 85 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L RH +
Sbjct: 15 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 66
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
VQ+ + + + IV E + SL D+LR D + + + E++ ++
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+H DL N+L+ KV D+ +S K LP
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 170
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE + ++ D+WS G +L E+ S
Sbjct: 171 -----------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 79 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 130
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD + +K + APE I + D+WS G
Sbjct: 191 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 228
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 229 VLLWEIFS 236
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
++G G FG V + + KK + + + N+ + A+ E +V+Q+L I
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 89
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
R + I +W + + +LGP L +L++N R + EL Q+ + ++
Sbjct: 90 RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 141
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 142 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK------------------ 183
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329
Q H + APE I ++ D+WS G ++ E S G+ ++ + E AM
Sbjct: 184 -AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
Query: 330 MER 332
+E+
Sbjct: 241 LEK 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 88 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD + +K + APE I + D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 84 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 140 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 181
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 182 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 236
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 237 RPEGCPEKVYELMRA 251
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 85 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
T + L K+G G FG V +C + AIK RS K ++ E + L+ + H +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
G +R + + +H+ I E G SL D + +N YR DL+ ++G
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 125
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
R L ++H + L+H D+KP NI +
Sbjct: 126 RGL----RYIHSMSLVHMDIKPSNIFI 148
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 85 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR + G T H +
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 180
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ + APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 181 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
I R V ++ R + +V E L PS L DFL+++ R +D R L Q+ +
Sbjct: 70 IVKYRGV---SYGPGRPELRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
+ ++ R +H DL NIL+ S +VK+ D+ K LP +D
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA----------KLLP-------LDK 165
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEALF 318
S + + APE + ++ D+WS G +L EL CS A F
Sbjct: 166 DXXVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 91/244 (37%), Gaps = 53/244 (21%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKNSYRSFPI-DLVRE 198
H + + N + + F K G +L +LR P DL ++
Sbjct: 88 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKDLYKD 139
Query: 199 L---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
Q+ + + F+ + IH DL NILL VK+ D+ KD
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
Y + +K + APE I + D+WS G +L
Sbjct: 200 YVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 310 ELCS 313
E+ S
Sbjct: 238 EIFS 241
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 80 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 56 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 166 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 205 WEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 72 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 121
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 182 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 221 WEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 72 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 121
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 182 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 221 WEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
T + L K+G G FG V +C + AIK RS K ++ E + L+ + H +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
G +R + + +H+ I E G SL D + +N YR DL+ ++G
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 123
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
R L ++H + L+H D+KP NI +
Sbjct: 124 RGL----RYIHSMSLVHMDIKPSNIFI 146
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 85 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 62 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 111
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 172 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 210
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 211 WEAFSYGQKPYRGMKGSEVTAMLEK 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
+KMGEG FG V + + N VA+K + AAM++I ++ Q+ + +
Sbjct: 31 NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
C V++ + + +C+V+ + SL D L + + ++ + +
Sbjct: 81 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 182
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
+ +V T Y APE + G D++S G +L+E+ +G
Sbjct: 183 XVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
T + L K+G G FG V +C + AIK RS K ++ E + L+ + H +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
G +R + + +H+ I E G SL D + +N YR DL+ ++G
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 121
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
R L ++H + L+H D+KP NI +
Sbjct: 122 RGL----RYIHSMSLVHMDIKPSNIFI 144
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 82 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 50 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 99
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 100 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 160 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 198
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 199 WEAFSYGQKPYRGMKGSEVTAMLEK 223
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 174
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
D EH+ + + APE + +++ D W G L E+
Sbjct: 175 --DDHXVMQEHRKVPFA-----WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 82 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 52 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 101
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+Y+K Q H + APE I ++ D+WS G ++
Sbjct: 162 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 200
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 201 WEAFSYGQKPYRGMKGSEVTAMLEK 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
H + + N + + F K G +L +LR Y+ P D
Sbjct: 88 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
L ++ Q+ + + F+ + IH DL NILL VK+ D+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
KD + +K + APE I + D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
+L E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ ++G G +G V + +++A+K +R+ +E + +D+ ++ + V
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTV 69
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH-EL 213
+ I E + SL F ++ + ++ P D++ ++ +++++ +H +L
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+IH D+KP N+L+ + VK+ D+ G ++ K ID G
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGI------SGYLVDDVAKD-----IDAG------- 171
Query: 274 DHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELC 312
+ Y APE I G++ D+WS+G ++EL
Sbjct: 172 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 93 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 149 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 190
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 191 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 245
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 246 RPEGCPEKVYELMRA 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 174
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ Q+H V + APE + +++ D W G L E+
Sbjct: 175 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 53/246 (21%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
H ++ G C + C K G +L +LR Y+ P DL
Sbjct: 79 GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
++ Q+ + + F+ + IH DL NILL VK+ D+ KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
+ +K + APE I + D+WS G +
Sbjct: 193 PDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
L E+ S
Sbjct: 231 LWEIFS 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
D EH+ + + APE + +++ D W G L E+
Sbjct: 165 --DDHXVMQEHRKVPFA-----WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLR--KNSYRSF-PIDLV 196
H + + N + + F K G +L +LR +N + + P DL
Sbjct: 90 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKPEDLY 141
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
++ Q+ + + F+ + IH DL NILL VK+ D+ KD
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
+ +K + APE I + D+WS G +
Sbjct: 202 PDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 239
Query: 308 LVELCS 313
L E+ S
Sbjct: 240 LWEIFS 245
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ Q+H V + APE + +++ D W G L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ Q+H V + APE + +++ D W G L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 34/244 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 287 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
+L N L+ VKV D+ LSR +Y + IK
Sbjct: 343 NLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 384
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 385 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 439
Query: 332 RVLG 335
R G
Sbjct: 440 RPEG 443
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ Q+H V + APE + +++ D W G L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R Y I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 326 REPPFY---IITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
+L N L+ VKV D+ LSR +Y + IK
Sbjct: 382 NLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 423
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 424 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 478
Query: 332 RVLG 335
R G
Sbjct: 479 RPEG 482
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK +++ +K R + E ++ + +
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + + + I+ E + SL FLRKN R I LV L R + +
Sbjct: 92 I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 145
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++ ++ +H DL NIL+ S KV D+ +SR +D + I +
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 198
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
+ APE I + D+WS G ++ E+ S GE + N + +
Sbjct: 199 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
Query: 328 AMME 331
+E
Sbjct: 245 KAIE 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L RH +
Sbjct: 24 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 75
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
VQ+ + + + IV E + SL D+LR D + + + E++ ++
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+H DL N+L+ KV D+ +S K LP
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 179
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE + ++ D+WS G +L E+ S
Sbjct: 180 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
+ ++G G FG +V K+ VAIK +R E + E +V+ +L+ +
Sbjct: 12 FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 65
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
VQ+ + IC+V E + L D+LR F + + + + E +A++ E
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+IH DL N L+ + +KV D+ ++R D Y + +K
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 170
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 171 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 78 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR + G T H +
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ + APE + ++ D+W+ G +L E+ + G Q +E LE ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95 RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
R+L K+G+G+FG V +D + V++ + ++ DVL + D
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
R V + D+RN I + L P SL D LRK+ F + +
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
+ Q+H V + APE + +++ D W G L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +K+ VAIK ++ + R + E ++ + +
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I +++ + I+ E + +L FLR N + I LV L R + +
Sbjct: 79 I-----IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGMR 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++ E+ +H DL NIL+ S KV D+ +FL +S D + +L I+
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR---- 188
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
+ APE I + D WS G ++ E+ S GE + N
Sbjct: 189 ------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
Query: 325 EHLAMMER 332
+ + +E+
Sbjct: 231 DVINAIEQ 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 81 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y IK
Sbjct: 137 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK----------------- 178
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 179 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 234 RPEGCPEKVYELMRA 248
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 82 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR +Y IK
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 135/362 (37%), Gaps = 85/362 (23%)
Query: 69 GSPPWRPDDKDGHY-VFAIGE-NLTPRYRILSKMGEGTFGQVV--ECFDNEKKELVAIKI 124
SP DD D V +G+ + P+ +G G G +V FDN VA+K
Sbjct: 3 SSPSLEQDDGDEETSVVIVGKISFCPK----DVLGHGAEGTIVYRGMFDNRD---VAVK- 54
Query: 125 VRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL 183
R + + A E+ +L+ H ++ C + F Y I E +L +++
Sbjct: 55 -RILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQY-----IAIELCAATLQEYV 108
Query: 184 RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243
+ + ++ + L +Q +A +H L ++H DLKP NIL +S
Sbjct: 109 EQKDFAHLGLEPITLL-QQTTSGLAHLHSLNIVHRDLKPHNIL--------------ISM 153
Query: 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCD 300
+ G + K + G +F + S V T + APE++ Y D
Sbjct: 154 PNAHGKIKAMISDFGLCKKLAVGRHSFSRR--SGVPGTEGWIAPEMLSEDCKENPTYTVD 211
Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
++S GC+ ++++ K +R A +
Sbjct: 212 IFSAGCVF------------------------------YYVISEGSHPFGKSLQRQANIL 241
Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
GA S D + +H D A +LI + ++ DP +R A+ L+HP
Sbjct: 242 L--GACSLDCLHP-----------EKHEDVIARELI---EKMIAMDPQKRPSAKHVLKHP 285
Query: 421 FF 422
FF
Sbjct: 286 FF 287
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK +++ +K R + E ++ + +
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + + + I+ E + SL FLRKN R I LV L R + +
Sbjct: 71 I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 124
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++ ++ +H DL NIL+ S KV D+ +SR +D + I +
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 177
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
+ APE I + D+WS G ++ E+ S GE + N + +
Sbjct: 178 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
Query: 328 AMME 331
+E
Sbjct: 224 KAIE 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L RH +
Sbjct: 9 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 60
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
VQ+ + + + IV E + SL D+LR D + + + E++ ++
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+H DL N+L+ KV D+ +S K LP
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 164
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE + ++ D+WS G +L E+ S
Sbjct: 165 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 284 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
+L N L+ VKV D+ LSR +Y + IK
Sbjct: 340 NLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 381
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ APE + ++ D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 382 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 436
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 437 RPEGCPEKVYELMRA 451
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G FG+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 78 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR + G T H +
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ + APE + ++ D+W+ G +L E+ + G Q +E LE ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK +++ +K R + E ++ + +
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
I + + + I+ E + SL FLRKN R I LV L R + +
Sbjct: 77 I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++ ++ +H DL NIL+ S KV D+ +SR +D + I +
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 183
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
+ APE I + D+WS G ++ E+ S GE + N + +
Sbjct: 184 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
Query: 328 AMME 331
+E
Sbjct: 230 KAIE 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 78 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H DL N ++ VK+ D+ ++R + +Y++ K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETAYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
++ R + APE + + D+WS G +L E+ S E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
W+
Sbjct: 268 CWQF 271
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 156 VQIRNWFDYRNHIC-----IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
VQI N+ ++ + IV E +G L+++ + P+ ++L +++++
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
H + L++ DLKPENI+L + +KLID G+ +
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVS- 229
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
Y+ T ++APE++ G D+++VG L L
Sbjct: 230 RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 94 YRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR-LARHD 149
+ +L +G G +G+V + ++ +L A+K+++ ++A E +R + H
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
V + F + ++ + + G L+ L + F V+ +++ ++
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALE 173
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
+H+L +I+ D+K ENILL S +V + D+ K + DF T
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDF----------GLSKEFVADETERAYDFCGT 223
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF 318
Y AP+++ G G + D WS+G ++ EL +G + F
Sbjct: 224 I-------------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 56/247 (22%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLR--KNSYRSF--PIDL 195
H + + N + + F K G +L +LR +N + + P DL
Sbjct: 89 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKTPEDL 140
Query: 196 VREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
++ Q+ + + F+ + IH DL NILL VK+ D+ K
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306
D + +K + APE I + D+WS G
Sbjct: 201 DPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 238
Query: 307 ILVELCS 313
+L E+ S
Sbjct: 239 LLWEIFS 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 78 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H DL N ++ VK+ D+ ++R + Y++ K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
++ R + APE + + D+WS G +L E+ S E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
W+
Sbjct: 268 CWQF 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
RQ+ ++ H H D+KPENIL+ + ++ + D+ S ++ +
Sbjct: 141 RQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE------------- 187
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
KL G+T V T +Y APE Y D++++ C+L E +G +Q
Sbjct: 188 KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
++ + E +V+Q+L I R + I +W + + +LGP L +L++N
Sbjct: 56 KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
R + EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
+ +K Q H + APE I ++ D+WS G ++
Sbjct: 166 NXYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
E S G+ ++ + E AM+E+
Sbjct: 205 WEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 138/369 (37%), Gaps = 121/369 (32%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--------------- 137
+Y + ++G+G++G V ++ A+K++ R+A
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 138 ------------EIDVLQRLARHDIGGTRCVQIRNWFDYRN--HICIVFEKL--GPSLYD 181
EI +L++L ++ V++ D N H+ +VFE + GP
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNV-----VKLVEVLDDPNEDHLYMVFELVNQGP---- 124
Query: 182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
+ + + D R + L++ + ++H ++IH D+KP N+L+
Sbjct: 125 VMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-------------- 170
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDH--SYVVSTRHYRAPEVIL---GLGW 295
+DG IK+ DFG S F+ D S V T + APE + +
Sbjct: 171 ---GEDGH----------IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFS 217
Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
D+W++G L G+ F M ER+ M + + +++
Sbjct: 218 GKALDVWAMGVTLYCFVFGQCPF----------MDERI-------MCLHSKIKSQA---- 256
Query: 356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
L++PD P++ A DL DL+ +L +P R+ E
Sbjct: 257 ---LEFPDQ----------------PDI--------AEDLKDLITRMLDKNPESRIVVPE 289
Query: 416 ALRHPFFTR 424
HP+ TR
Sbjct: 290 IKLHPWVTR 298
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 106
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 107 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 164
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 212
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 213 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 80 -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 185
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 186 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 96
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 97 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 154
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 202
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 203 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V E + VA+K ++ E + E V++ + ++ V
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
R + +I F G +L D+LR+ + + ++ + Q+ ++ ++ + IH
Sbjct: 78 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
DL N L+ VKV D+ LSR + G T H +
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTFTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
+ + APE + ++ D+W+ G +L E+ + G Q +E LE ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
R G P + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 79 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H +L N ++ VK+ D+ ++R + Y++ K
Sbjct: 134 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 192
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
++ R + APE + + D+WS G +L E+ S E
Sbjct: 193 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 232 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 268
Query: 374 VWKL 377
W+
Sbjct: 269 CWQF 272
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 78 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H DL N ++ VK+ D+ ++R
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 178
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
D T + ++ R + APE + + D+WS G +L E+ S E
Sbjct: 179 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
W+
Sbjct: 268 CWQF 271
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQV---VECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + VAIK ++ + RE + E +++ I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R F +DL + QL ++A++
Sbjct: 78 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ + + VK+ D+ LSR +D +Y+K IK
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 177
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 178 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 78 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H DL N ++ VK+ D+ ++R
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 178
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
D T + ++ R + APE + + D+WS G +L E+ S E
Sbjct: 179 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
W+
Sbjct: 268 CWQF 271
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 74
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 75 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H DL N ++ VK+ D+ ++R
Sbjct: 130 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 175
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
D T + ++ R + APE + + D+WS G +L E+ S E
Sbjct: 176 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 228 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 264
Query: 374 VWKL 377
W+
Sbjct: 265 CWQF 268
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 80 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 185
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 186 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
H + V++ +V E + L +LR N R P + +
Sbjct: 78 TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
++ ++ + +A+++ + +H +L N ++ VK+ D+ ++R + Y++ K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
++ R + APE + + D+WS G +L E+ S E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
+Q N E+VL K+ G LD PD R D MR
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
W+
Sbjct: 268 CWQF 271
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
L D +R+N R DL+ Q+ + ++++ ++RL+H DL N+L+ S +VK+ D+
Sbjct: 105 LLDHVRENRGRLGSQDLL-NWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDF 163
Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 298
+L+D T + H D V + A E IL + +
Sbjct: 164 GL-------------------ARLLDIDETEY-HADGGKV--PIKWMALESILRRRFTHQ 201
Query: 299 CDLWSVGCILVELCS 313
D+WS G + EL +
Sbjct: 202 SDVWSYGVTVWELMT 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHD--- 149
YRI+ + +G F +++ C + + K K +S+ K R+ D + +++D
Sbjct: 33 YRIIRTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91
Query: 150 --------IGGTRCVQIRNWFDYRNHICIVFEKL-GPSL-----YDFLRKNSYRSF-PID 194
I C+ + + I++E + S+ Y F+ +Y F PI
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 195 LVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
+++ + + +L S +++H E + H D+KP NIL+ VK+ D+
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQV---VECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + VAIK ++ + RE + E +++ I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R F +DL + QL ++A++
Sbjct: 458 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 557
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 558 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMIEIDVLQRLARHDIGGTRCVQ 157
+G+G V + +L AIK+ +I+ R + M E +VL++L +I +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI--VKLFA 74
Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRL 215
I R+ + I+ SLY L + N+Y P + R ++ + + E +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
+H ++KP NI+ V E DG S KL DFG+ D
Sbjct: 134 VHRNIKPGNIMRVIGE---------------DG--------QSVYKLTDFGAARELEDDE 170
Query: 276 SYVV--STRHYRAPEV----IL----GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
+V T Y P++ +L + DLWS+G +G F+ E
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 32/232 (13%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
+L ++G G FG VV+ + + VA+K+++ + + E + +L+ +
Sbjct: 12 LLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH-----PKL 65
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
V+ I IV E + L ++LR + P L+ E+ + E +AF+ +
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLESHQ 124
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
IH DL N L+ VKV D+ ++R D Y ++ +K
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFG-MTRYVLDDQYVSSVGTKFPVK------------- 170
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
+ APEV ++ D+W+ G ++ E+ S G+ + + N E
Sbjct: 171 ---------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ L+R +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LARVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V +++ VAIK ++ K R + E ++ + +I
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 85
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+ + + IV E + SL FL+KN + I LV L R + + ++ ++
Sbjct: 86 -IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML-RGISAGMKYLSDM 143
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ LSR +D + I +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 191
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 331
+ APE I + D+WS G ++ E+ S GE + N + + +E
Sbjct: 192 ---------RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE 241
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 43/227 (18%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
+K GEG FG V + + N VA+K + AAM++I ++ Q+ + +
Sbjct: 28 NKXGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVXAK 77
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
C V++ + + +C+V+ SL D L + ++ + +
Sbjct: 78 CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 179
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
S +V T Y APE + G D++S G +L+E+ +G
Sbjct: 180 XVXX----SRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQV---VECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + VAIK ++ + RE + E +++ I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R F +DL + QL ++A++
Sbjct: 458 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ + + VK+ D+ LSR +D +Y+K IK
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 557
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 558 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
+G G FG+V ++K+ VAIK ++ K R + E ++ + +I
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
+++ + IV E + SL FLRK+ + I LV L R + + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+H DL NIL+ S KV D+ L R +D + I +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LGRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ +PE I + D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 83 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 134
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 182
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 183 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMIEIDVLQRLARHDIGGTRCVQ 157
+G+G V + +L AIK+ +I+ R + M E +VL++L +I +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI--VKLFA 74
Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRL 215
I R+ + I+ SLY L + N+Y P + R ++ + + E +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
+H ++KP NI+ V E DG S KL DFG+ D
Sbjct: 134 VHRNIKPGNIMRVIGE---------------DG--------QSVYKLTDFGAARELEDDE 170
Query: 276 SYV--VSTRHYRAPEV----IL----GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
+V T Y P++ +L + DLWS+G +G F+ E
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 81 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 132
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 180
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 181 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 106 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 157
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 205
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 206 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 34/221 (15%)
Query: 100 MGEGTFGQVVECF---DNEKKEL-VAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGT 153
+G G FG+V + + KKE+ VAIK +++ K R + E ++ + + H+I
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI--- 108
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
+++ + I+ E + D FLR+ + LV L R + + ++
Sbjct: 109 --IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML-RGIAAGMKYLAN 165
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
+ +H DL NIL+ S KV D+ LSR +D I +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFG-LSRVLEDDPEATYTTSGGKIPI---------- 214
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G ++ E+ +
Sbjct: 215 ----------RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQV---VECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + VAIK ++ + RE + E +++ I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 78 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 177
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 178 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 80 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 179
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 180 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 78 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIK----------- 177
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 178 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 100 MGEGTFGQVVECF--DNEKKEL-VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + E L VAIK ++ + RE + E +++ I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R + +DL + QL ++A++
Sbjct: 75 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
R +H D+ N+L+ S + VK+ D+ LSR +D +Y+K IK + S F
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTYYKASKGKLPIKWMAPESINF 183
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 36/248 (14%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
K+G G +G+V + VA+K ++ E + E V++ + ++ VQ+
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQL 93
Query: 159 RNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
IV E + +L D+LR+ + ++ + Q+ ++ ++ + IH
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
DL N L+ VKV D+ LSR +Y + IK
Sbjct: 154 RDLAARNCLVGENHVVKVADFG-LSRLMTGDTYTAHAGAKFPIK---------------- 196
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMM 330
+ APE + ++ D+W+ G +L E+ + G L Q ++ LE M
Sbjct: 197 ------WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM 250
Query: 331 ERVLGPLP 338
E+ G P
Sbjct: 251 EQPEGCPP 258
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 57/253 (22%)
Query: 92 PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
PR I + +GEG FG+V + E +VA+K++ K +A ++ D +
Sbjct: 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML----KEEASADMQADFQRE 100
Query: 145 LA-RHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSF----------- 191
A + V++ +C++FE + L +FLR S +
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 192 ---------PIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
P+ +L RQ+ +A++ E + +H DL N L+ VK+ D+
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG- 219
Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
LSR+ Y+K D + + R + PE I + D
Sbjct: 220 LSRNIYSADYYK--------------------ADGNDAIPIR-WMPPESIFYNRYTTESD 258
Query: 301 LWSVGCILVELCS 313
+W+ G +L E+ S
Sbjct: 259 VWAYGVVLWEIFS 271
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 37/228 (16%)
Query: 99 KMGEGTFGQV--VECFD---NEKKELVAIKIVRSINK------YREAAMIEIDVLQRLAR 147
++GEG FG+V EC + + K LVA+K ++ ++ REA ++ + Q + R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 148 HDIGGTRCVQIRNWFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG--RQL 203
T + F+Y H + GP P+ L + L Q+
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ L +H DL N L+ VK+ D+ +SR
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-MSR-------------------- 206
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
D ST + ++ R + PE IL + D+WS G +L E+
Sbjct: 207 DIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
+ ++G G +G V + ++ A+K +R+ +E + D+ ++ + V
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDL--DISXRTVDCPFTV 96
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH-EL 213
+ I E SL F ++ + ++ P D++ ++ +++++ +H +L
Sbjct: 97 TFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
+IH D+KP N+L+ + VK D+ D K ID G
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD-----------VAKDIDAG------- 198
Query: 274 DHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELC 312
+ Y APE I G++ D+WS+G +EL
Sbjct: 199 -------CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 100 MGEGTFGQVVE-CFDNEKKELVAIKIVRSINK-----YREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V E + N K E + + V++ K +E M E +++ L I
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI--V 88
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
+ + I + +L P L +L +N S + + Q+ +++A++
Sbjct: 89 KLIGI-----IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLE 142
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
+ +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK + S F
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIKWMSPESINF 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 37/228 (16%)
Query: 99 KMGEGTFGQV--VECFD---NEKKELVAIKIVRSINK------YREAAMIEIDVLQRLAR 147
++GEG FG+V EC + + K LVA+K ++ ++ REA ++ + Q + R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 148 HDIGGTRCVQIRNWFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG--RQL 203
T + F+Y H + GP P+ L + L Q+
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ L +H DL N L+ VK+ D+ +SR Y++
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-MSRDIYSTDYYR----------- 186
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
G T ++ R + PE IL + D+WS G +L E+
Sbjct: 187 -VGGRT--------MLPIR-WMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 37/228 (16%)
Query: 99 KMGEGTFGQV--VECFD---NEKKELVAIKIVRSINK------YREAAMIEIDVLQRLAR 147
++GEG FG+V EC + + K LVA+K ++ ++ REA ++ + Q + R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 148 HDIGGTRCVQIRNWFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG--RQL 203
T + F+Y H + GP P+ L + L Q+
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
+ ++ L +H DL N L+ VK+ D+ +SR Y++
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-MSRDIYSTDYYR----------- 192
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
G T ++ R + PE IL + D+WS G +L E+
Sbjct: 193 -VGGRT--------MLPIR-WMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 100 MGEGTFGQVVE-CFDNEKKELVAIKIVRSINK-----YREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V E + N K E + + V++ K +E M E +++ L I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI--V 76
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
+ + I + +L P L +L +N S + + Q+ +++A++
Sbjct: 77 KLIGI-----IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLE 130
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
+ +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK + S F
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIKWMSPESINF 188
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 45/260 (17%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAAMIE 138
F +G L + +L GEG F QV E D + K+ +K+ + N + I
Sbjct: 60 FQLGSKLVYVHHLL---GEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE--FYIG 114
Query: 139 IDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDF--------LRKNS-YR 189
+++RL +Q Y H+ L LY + L KN+ +
Sbjct: 115 TQLMERLKP-------SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK 167
Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD-- 247
P LV ++L + +H+ +IH D+KP+N +L + FL + +D
Sbjct: 168 VMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG---------FLEQDDEDDL 218
Query: 248 --GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
G +L +S +KL G T F + T ++ E++ WNY D + V
Sbjct: 219 SAGLALIDLGQSIDMKLFPKG-TIFTAK-----CETSGFQCVEMLSNKPWNYQIDYFGVA 272
Query: 306 CILVELCSGEALFQTHENLE 325
+ + G + +E E
Sbjct: 273 ATVYCMLFGTYMKVKNEGGE 292
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 100 MGEGTFGQVVE-CFDNEKKELVAIKIVRSINK-----YREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V E + N K E + + V++ K +E M E +++ L I
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI--V 72
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
+ + I + +L P L +L +N S + + Q+ +++A++
Sbjct: 73 KLIGI-----IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLE 126
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
+ +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK + S F
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIKWMSPESINF 184
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
F K G SL +L+KN I E+ +QL ++ F+ E LIH ++ +NILL+ E
Sbjct: 93 FVKFG-SLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREE 150
Query: 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL 291
K + F+ + S G LPK + I + PE I
Sbjct: 151 DRKTGNPPFI-KLSDPGISITVLPKDILQERIP-------------------WVPPECIE 190
Query: 292 G-LGWNYPCDLWSVGCILVELCSG 314
N D WS G L E+CSG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
F K G SL +L+KN I E+ +QL ++ F+ E LIH ++ +NILL+ E
Sbjct: 93 FVKFG-SLDTYLKKNK-NCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREE 150
Query: 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL 291
K + F+ + S G LPK + I + PE I
Sbjct: 151 DRKTGNPPFI-KLSDPGISITVLPKDILQERIP-------------------WVPPECIE 190
Query: 292 G-LGWNYPCDLWSVGCILVELCSG 314
N D WS G L E+CSG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V ++ VAIK ++ K R + E ++ + +
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQLLESVA 208
+ V R + IV E + D FLRK+ + I LV L R + +
Sbjct: 106 VVHLEGVVTRG-----KPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGML-RGIAAGMR 159
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
++ ++ +H DL NIL+ S KV D+ LSR +D A+ G
Sbjct: 160 YLADMGYVHRDLAARNILVNSNLVCKVSDFG-LSRVIED--------DPEAVYTTTGGKI 210
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
+ APE I + D+WS G ++ E+ S GE + N + +
Sbjct: 211 PV------------RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 258
Query: 328 AMME 331
+E
Sbjct: 259 KAIE 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 214
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
N + APE + + + D+WS G ++ E+
Sbjct: 215 NTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVAYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 214
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 215 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 37/234 (15%)
Query: 93 RYRILSK--MGEGTFGQV--VECFD---NEKKELVAIKIVR-SINKYREAAMIEIDVLQR 144
R+ I+ K +GEG FG+V EC++ + K LVA+K ++ + + R+ E ++L
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 71
Query: 145 LARHDIGGTRCVQIRN-----WFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
L I V + F+Y H + GP N +
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
+ +Q+ + ++ +H DL N L+ VK+ D+ +SR Y++
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG-MSRDVYSTDYYR----- 185
Query: 258 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
G T ++ R + PE I+ + D+WS+G +L E+
Sbjct: 186 -------VGGHT--------MLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + ++ E++L+H DL NIL+ +K+ D+ ++ SY K +K
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK 217
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ S DH Y + D+WS G +L E+ +
Sbjct: 218 WMAIESLF----DHIYTTQS------------------DVWSFGVLLWEIVT 247
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G +L E+ S
Sbjct: 268 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G +L E+ S
Sbjct: 266 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G +L E+ S
Sbjct: 259 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ APE I + D+WS G +L E+ S
Sbjct: 261 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 45/218 (20%)
Query: 84 FAIGENLT----PRYRILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVRSINKYREA 134
FA+GE +T +++ +G+G FG + N + + +K+ S N
Sbjct: 23 FAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---P 79
Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---------------------NHICIVFE 173
E+ QR A+ + QI+ W R ++ ++ +
Sbjct: 80 LFTELKFYQRAAKPE-------QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMD 132
Query: 174 KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL--VSAE 231
+ G L N+ R F V +L ++L+ + ++HE +H D+K N+LL + +
Sbjct: 133 RFGSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD 191
Query: 232 YVKVPDYKFLSRSSKDGSY--FKNLPKSSAIKLIDFGS 267
V + DY R +G + +K PK I+F S
Sbjct: 192 QVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTS 229
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 45/218 (20%)
Query: 84 FAIGENLT----PRYRILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVRSINKYREA 134
FA+GE +T +++ +G+G FG + N + + +K+ S N
Sbjct: 23 FAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---P 79
Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---------------------NHICIVFE 173
E+ QR A+ + QI+ W R ++ ++ +
Sbjct: 80 LFTELKFYQRAAKPE-------QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMD 132
Query: 174 KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL--VSAE 231
+ G L N+ R F V +L ++L+ + ++HE +H D+K N+LL + +
Sbjct: 133 RFGSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD 191
Query: 232 YVKVPDYKFLSRSSKDGSY--FKNLPKSSAIKLIDFGS 267
V + DY R +G + +K PK I+F S
Sbjct: 192 QVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTS 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCV 156
++G G FG+V LVA+K R + + E +L++ + +I V
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----V 175
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ + I IV E + G FLR R L++ +G + ++
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGMEYLESKCC 234
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY-----FKNLP-KSSAIKLIDFGSTT 269
IH DL N L+ +K+ D+ +SR DG Y + +P K +A + +++G +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFG-MSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 270 FEHQDHSYVV 279
E S+ +
Sbjct: 294 SESDVWSFGI 303
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 58/240 (24%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARHD- 149
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE--- 198
+G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IIHLLGA--CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 199 -------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYY 213
Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K K++ +L + APE + + + D+WS G ++ E+
Sbjct: 214 K---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVGYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 214
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 215 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 54/238 (22%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 151 GGT---RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE----- 198
T C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IITLLGACTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 199 -----LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK- 214
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 215 --KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 149 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 260
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 261 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 31/245 (12%)
Query: 77 DKDGHYVFAIGENLTPRYRILSK----MGEGTFGQVV--ECFDNEKKEL-VAIKIVRSIN 129
D D + + + L P R+++ +G+G FG V E D + + AIK + I
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT 61
Query: 130 KYREA-AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
+ ++ A + +L R H + I + H+ + + G L F+R
Sbjct: 62 EMQQVEAFLREGLLMRGLNHP-NVLALIGIMLPPEGLPHVLLPYMCHG-DLLQFIRSPQR 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
DL+ G Q+ + ++ E + +H DL N +L + VKV D+ L+R D
Sbjct: 120 NPTVKDLI-SFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG-LARDILDR 177
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
Y+ Q H + + A E + + D+WS G +L
Sbjct: 178 EYYSV-------------------QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218
Query: 309 VELCS 313
EL +
Sbjct: 219 WELLT 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 93/240 (38%), Gaps = 39/240 (16%)
Query: 100 MGEGTFGQV---VECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
+GEG FG V + VAIK ++ + RE + E +++ I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFMHE 212
V N +C + E L FL+ R F +DL + QL ++A++
Sbjct: 78 GVITENPVWIIMELCTLGE-----LRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
R +H D+ N+L+ S + VK+ D+ LSR +D + K IK
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYMEDSTXXKASKGKLPIK----------- 177
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG-CILVELCSGEALFQTHENLEHLAMME 331
+ APE I + D+W G C+ L G FQ +N + + +E
Sbjct: 178 -----------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 90 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFG-LARDINNIDYYK 201
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 202 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 95 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 206
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 207 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 92 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 203
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 204 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + + + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK 214
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 215 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +++ D+ L+R + Y+K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFG-LARDINNIDYYK 214
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 215 ---KTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 93 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 148
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 192
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 96 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 151
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 195
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 116 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 171
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 98 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 153
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 197
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
SL D +R++ P L+ G Q+ + + ++ E ++H +L N+LL S V+V D
Sbjct: 100 SLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVAD 158
Query: 238 YKFLSRSSKDG-----SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 281
+ D S K K A++ I FG T + SY V+
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 90 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 145
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 189
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 95 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 150
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 194
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 97 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 152
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 196
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 98 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 153
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N +L VKV D+ L+R D Y+ K+ A +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGAKLPVK---------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ A E + + D+WS G +L EL +
Sbjct: 203 ---------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 45/218 (20%)
Query: 84 FAIGENLT----PRYRILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVRSINKYREA 134
FA+GE +T +++ +G+G FG + N + + +K+ S N
Sbjct: 23 FAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---P 79
Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---------------------NHICIVFE 173
E+ QR A+ + QI+ W R ++ ++ +
Sbjct: 80 LFTELKFYQRAAKPE-------QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMD 132
Query: 174 KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL--VSAE 231
+ G L N+ R F V +L ++L+ + ++HE +H D+K N+LL + +
Sbjct: 133 RFGSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD 191
Query: 232 YVKVPDYKFLSRSSKDGSY--FKNLPKSSAIKLIDFGS 267
V + DY R +G + + PK I+F S
Sbjct: 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS 229
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 96 ILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAA---MIEIDVLQRLARHDI 150
I K+G G+FG V E ++ VA+KI+ + + E + E+ +++RL +I
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSD----VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR--QLLESV 207
V ++ IV E L SLY L K+ R +D R L + + +
Sbjct: 97 -----VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGM 150
Query: 208 AFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++H ++H +LK N+L+ VKV D+ LSR
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG-LSR---------------------L 188
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
++TF + T + APEV+ N D++S G IL EL +
Sbjct: 189 KASTFLSSKSA--AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + ++ +
Sbjct: 117 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKK 172
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
+H DL N +L VKV D+ L+R D Y+ K+ A
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKEYYSVHNKTGA 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
SL D +R++ P L+ G Q+ + + ++ E ++H +L N+LL S V+V D
Sbjct: 118 SLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVAD 176
Query: 238 YKFLSRSSKDG-----SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 281
+ D S K K A++ I FG T + SY V+
Sbjct: 177 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 225
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + ++ E++L+H DL NIL+ +K+ D+ ++ S K +K
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ S DH Y + D+WS G +L E+ +
Sbjct: 218 WMAIESLF----DHIYTTQS------------------DVWSFGVLLWEIVT 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 44/232 (18%)
Query: 99 KMGEGTFGQV--VECFD---NEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDI-- 150
++GEG FG+V EC++ + K LVA+K ++ R+ E ++L L I
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 151 ------GGTRCVQIRNWFDYRNH--ICIVFEKLGPS---LYDFLRKNSYRSFPIDLVREL 199
G + + F+Y H + GP L D + + + + +
Sbjct: 82 FYGVCGDGDPLIMV---FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
Q+ + ++ +H DL N L+ + VK+ D+ +SR Y++
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG-MSRDVYSTDYYR------- 190
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
G T ++ R + PE I+ + D+WS G IL E+
Sbjct: 191 -----VGGHT--------MLPIR-WMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 44/228 (19%)
Query: 96 ILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAA---MIEIDVLQRLARHDI 150
I K+G G+FG V E ++ VA+KI+ + + E + E+ +++RL +I
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSD----VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR--QLLESV 207
V ++ IV E L SLY L K+ R +D R L + + +
Sbjct: 97 -----VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGM 150
Query: 208 AFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
++H ++H DLK N+L+ VKV D+ S +K F
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL-----------------SRLKASXF 193
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ T + APEV+ N D++S G IL EL +
Sbjct: 194 LXS-------KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ ++D +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL----ARDINNID 211
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 212 XXKKTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 16/190 (8%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCV 156
++G G FG+V LVA+K R + + E +L++ + +I V
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----V 175
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
++ + I IV E + G FLR R L++ +G + ++
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGMEYLESKCC 234
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG-----SYFKNLP-KSSAIKLIDFGSTT 269
IH DL N L+ +K+ D+ +SR DG + +P K +A + +++G +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFG-MSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 270 FEHQDHSYVV 279
E S+ +
Sbjct: 294 SESDVWSFGI 303
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 56/239 (23%)
Query: 100 MGEGTFGQVVEC----FDNEKKE---LVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
+GEG FGQVV D +K + VA+K+++ + K + E+++++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 --DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRE---- 198
++ G C Q D ++ + + G +L ++LR S+ I+ V E
Sbjct: 103 IINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 199 ------LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
QL + ++ + IH DL N+L+ +K+ D+ ++D +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL----ARDINNID 211
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
K++ +L + APE + + + D+WS G ++ E+
Sbjct: 212 XXKKTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 126
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 127 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYN 179
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 180 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 237
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 238 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 276
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 277 WSFGVLLWEI 286
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 86 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYN 138
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 139 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 196
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 197 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 235
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 236 WSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 19 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 78
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 79 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYN 131
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 132 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 189
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 190 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 228
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 229 WSFGVLLWEI 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 18 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 77
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 78 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYN 130
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 131 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 188
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 189 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 227
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 228 WSFGVLLWEI 237
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 15 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 74
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 75 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYN 127
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 128 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 185
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 186 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 224
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 225 WSFGVLLWEI 234
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS-----YRSF 191
+++ + +H ++ G C Q D ++ + + G +L ++L+ Y
Sbjct: 86 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQAREPPGLEYSYN 138
Query: 192 PI----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
P DLV Q+ + ++ + IH DL N+L+ +K+ D+ L
Sbjct: 139 PSHNPEEQLSSKDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-L 196
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
+R Y+K K++ +L + APE + + + D+
Sbjct: 197 ARDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDV 235
Query: 302 WSVGCILVEL 311
WS G +L E+
Sbjct: 236 WSFGVLLWEI 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + F+ + IH DL NILL VK+ D+ K+ Y +
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK-------- 258
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
G T + + APE I ++ D+WS G +L E+ S
Sbjct: 259 ----GDTRLPLK----------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + F+ +
Sbjct: 98 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKK 153
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N +L VKV D+ L+R D F ++ + KL
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKE-FDSVHNKTGAKL------------ 199
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ A E + + D+WS G +L EL +
Sbjct: 200 ------PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 58/249 (23%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 70
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----------- 185
+++ + +H ++ G C Q D ++ + + G +L ++L+
Sbjct: 71 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYCYN 123
Query: 186 ---NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
N + Q+ + ++ + IH DL N+L+ +K+ D+ L+
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-LA 182
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
R Y+K K++ +L + APE + + + D+W
Sbjct: 183 RDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDVW 221
Query: 303 SVGCILVEL 311
S G +L E+
Sbjct: 222 SFGVLLWEI 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + F+ +
Sbjct: 98 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKK 153
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N +L VKV D+ L+R D F ++ + KL
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKE-FDSVHNKTGAKL------------ 199
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ A E + + D+WS G +L EL +
Sbjct: 200 ------PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 100 MGEGTFGQVVE--CFDNEKKEL-VAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
+G G FG V DN+ K++ A+K + I E + + E +++ + ++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
+ +R+ + + + + K G L +F+R ++ DL+ G Q+ + + F+ +
Sbjct: 103 GICLRS--EGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKK 158
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
+H DL N +L VKV D+ L+R D F ++ + KL
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFG-LARDMYDKE-FDSVHNKTGAKL------------ 204
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ A E + + D+WS G +L EL +
Sbjct: 205 ------PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 58/249 (23%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----------- 185
+++ + +H ++ G C Q D ++ + + G +L ++L+
Sbjct: 86 MMKMIGKHKNIINLLGA-CTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYCYN 138
Query: 186 ---NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
N + Q+ + ++ + IH DL N+L+ +K+ D+ L+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG-LA 197
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
R Y+K K++ +L + APE + + + D+W
Sbjct: 198 RDIHHIDYYK---KTTNGRL------------------PVKWMAPEALFDRIYTHQSDVW 236
Query: 303 SVGCILVEL 311
S G +L E+
Sbjct: 237 SFGVLLWEI 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
Q+ + + ++ E RL+H DL N+L+ S +VK+ D+ D + IK
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
+ + HYR + + D+WS G + EL +
Sbjct: 185 WM--------------ALECIHYRK--------FTHQSDVWSYGVTIWELMT 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,517,248
Number of Sequences: 62578
Number of extensions: 565339
Number of successful extensions: 4705
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 1498
Number of HSP's gapped (non-prelim): 1744
length of query: 438
length of database: 14,973,337
effective HSP length: 102
effective length of query: 336
effective length of database: 8,590,381
effective search space: 2886368016
effective search space used: 2886368016
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)