Query 013707
Match_columns 438
No_of_seqs 479 out of 1327
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 06:34:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013707.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013707hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.1E-38 4.5E-43 282.9 39.4 373 7-434 12-390 (394)
2 PRK03545 putative arabinose tr 100.0 1.2E-36 2.7E-41 285.1 39.5 365 10-431 11-381 (390)
3 COG2271 UhpC Sugar phosphate p 100.0 5.3E-37 1.1E-41 269.8 30.4 369 6-397 23-409 (448)
4 PRK11551 putative 3-hydroxyphe 100.0 1.5E-35 3.2E-40 279.8 38.4 349 10-397 17-370 (406)
5 TIGR00900 2A0121 H+ Antiporter 100.0 4.8E-36 1E-40 279.2 34.1 349 12-397 3-363 (365)
6 PRK14995 methyl viologen resis 100.0 8.2E-36 1.8E-40 287.1 35.5 377 7-398 5-414 (495)
7 PRK11646 multidrug resistance 100.0 3.6E-35 7.8E-40 275.1 38.4 367 11-425 13-383 (400)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.3E-36 4.9E-41 284.4 30.2 377 7-399 7-397 (412)
9 PRK11663 regulatory protein Uh 100.0 5.7E-35 1.2E-39 277.1 38.8 389 10-431 25-425 (434)
10 PRK03633 putative MFS family t 100.0 8E-35 1.7E-39 271.9 37.7 371 3-432 1-374 (381)
11 PRK09705 cynX putative cyanate 100.0 6.3E-35 1.4E-39 273.2 36.3 353 25-433 26-384 (393)
12 PRK09556 uhpT sugar phosphate 100.0 4.4E-35 9.5E-40 280.6 35.1 360 14-396 35-411 (467)
13 PRK10213 nepI ribonucleoside t 100.0 4.1E-34 9E-39 267.4 40.1 330 20-397 32-366 (394)
14 PRK11195 lysophospholipid tran 100.0 1.8E-34 3.9E-39 269.8 36.7 347 8-395 3-354 (393)
15 TIGR00893 2A0114 d-galactonate 100.0 4.4E-35 9.6E-40 275.9 32.1 358 19-398 5-374 (399)
16 PRK10642 proline/glycine betai 100.0 8.6E-34 1.9E-38 273.0 41.4 369 7-398 15-405 (490)
17 TIGR01299 synapt_SV2 synaptic 100.0 1.4E-34 3.1E-39 283.4 35.9 394 13-429 172-733 (742)
18 PRK05122 major facilitator sup 100.0 3.6E-34 7.9E-39 269.6 36.7 373 5-435 12-394 (399)
19 PRK09874 drug efflux system pr 100.0 1.2E-33 2.5E-38 267.2 40.2 378 5-428 11-396 (408)
20 PRK09952 shikimate transporter 100.0 1E-33 2.2E-38 268.6 39.5 388 6-431 20-434 (438)
21 PRK10489 enterobactin exporter 100.0 2.2E-34 4.8E-39 272.4 34.8 350 7-398 16-375 (417)
22 PRK10091 MFS transport protein 100.0 9.5E-34 2.1E-38 264.6 38.5 342 8-398 3-351 (382)
23 TIGR00903 2A0129 major facilit 100.0 3.5E-34 7.6E-39 263.9 34.7 330 19-395 2-340 (368)
24 TIGR00891 2A0112 putative sial 100.0 1.2E-34 2.7E-39 273.7 32.3 373 7-399 11-392 (405)
25 PRK03699 putative transporter; 100.0 1.6E-33 3.4E-38 264.3 39.2 347 5-398 4-356 (394)
26 TIGR00899 2A0120 sugar efflux 100.0 9.6E-34 2.1E-38 264.8 37.1 362 14-428 3-372 (375)
27 PRK15402 multidrug efflux syst 100.0 2.1E-33 4.6E-38 264.8 39.2 342 14-397 19-370 (406)
28 TIGR00711 efflux_EmrB drug res 100.0 4.6E-34 1E-38 276.1 33.4 374 9-397 3-410 (485)
29 PRK10406 alpha-ketoglutarate t 100.0 6.6E-33 1.4E-37 263.0 40.6 351 10-397 24-398 (432)
30 PRK12382 putative transporter; 100.0 1.8E-33 4E-38 264.1 36.1 365 6-428 13-387 (392)
31 PRK11273 glpT sn-glycerol-3-ph 100.0 8.9E-33 1.9E-37 263.5 41.3 339 47-398 59-411 (452)
32 PF07690 MFS_1: Major Facilita 100.0 9.2E-35 2E-39 269.2 26.7 343 13-388 1-352 (352)
33 PRK10054 putative transporter; 100.0 1E-33 2.3E-38 264.8 33.9 353 1-398 1-360 (395)
34 TIGR00710 efflux_Bcr_CflA drug 100.0 5.1E-33 1.1E-37 260.8 38.4 343 7-392 4-356 (385)
35 PRK12307 putative sialic acid 100.0 1.7E-33 3.7E-38 267.4 35.5 358 7-398 17-384 (426)
36 PRK10504 putative transporter; 100.0 6.6E-33 1.4E-37 266.6 39.3 378 7-400 9-418 (471)
37 TIGR00897 2A0118 polyol permea 100.0 1.5E-32 3.2E-37 258.3 39.2 374 6-429 11-400 (402)
38 TIGR00890 2A0111 Oxalate/Forma 100.0 3.1E-33 6.7E-38 261.4 34.4 333 24-398 19-358 (377)
39 PRK10077 xylE D-xylose transpo 100.0 7E-34 1.5E-38 274.3 30.1 376 8-395 12-424 (479)
40 PF05977 MFS_3: Transmembrane 100.0 9.9E-33 2.1E-37 262.0 36.9 377 6-427 8-391 (524)
41 PRK11652 emrD multidrug resist 100.0 4.5E-32 9.9E-37 254.8 40.1 351 1-396 1-359 (394)
42 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-33 4E-38 263.2 28.8 359 17-398 4-373 (379)
43 TIGR00895 2A0115 benzoate tran 100.0 3.6E-33 7.8E-38 263.0 31.0 367 12-394 21-397 (398)
44 PRK10133 L-fucose transporter; 100.0 1.2E-31 2.6E-36 253.4 39.7 347 9-398 27-408 (438)
45 TIGR00712 glpT glycerol-3-phos 100.0 7.3E-32 1.6E-36 256.4 38.0 366 47-433 57-436 (438)
46 PRK15075 citrate-proton sympor 100.0 6.4E-32 1.4E-36 256.4 37.6 357 5-399 12-396 (434)
47 TIGR00879 SP MFS transporter, 100.0 5.4E-33 1.2E-37 268.4 30.6 378 16-397 36-445 (481)
48 PRK15011 sugar efflux transpor 100.0 1.3E-31 2.8E-36 251.1 38.6 371 5-429 12-390 (393)
49 PRK15403 multidrug efflux syst 100.0 2.5E-31 5.3E-36 250.1 40.5 342 14-397 22-373 (413)
50 TIGR00887 2A0109 phosphate:H+ 100.0 3.1E-32 6.7E-37 263.2 34.2 382 9-397 17-454 (502)
51 PRK10473 multidrug efflux syst 100.0 3E-31 6.5E-36 249.1 39.6 344 8-399 3-351 (392)
52 TIGR00902 2A0127 phenyl propri 100.0 1.3E-31 2.9E-36 250.1 36.0 362 11-427 7-376 (382)
53 COG2223 NarK Nitrate/nitrite t 100.0 6.3E-32 1.4E-36 238.4 30.5 375 7-432 13-403 (417)
54 PRK03893 putative sialic acid 100.0 1.3E-31 2.8E-36 259.5 35.7 377 7-398 19-429 (496)
55 TIGR00892 2A0113 monocarboxyla 100.0 8E-32 1.7E-36 256.5 33.0 342 45-401 48-399 (455)
56 PLN00028 nitrate transmembrane 100.0 1.8E-31 3.8E-36 255.5 35.0 347 7-390 35-402 (476)
57 TIGR00898 2A0119 cation transp 100.0 2.5E-32 5.4E-37 265.0 28.9 364 43-430 116-495 (505)
58 TIGR00894 2A0114euk Na(+)-depe 100.0 2.9E-32 6.2E-37 261.6 28.7 369 45-437 70-457 (465)
59 PRK11102 bicyclomycin/multidru 100.0 5.9E-31 1.3E-35 246.0 36.2 329 21-390 4-342 (377)
60 cd06174 MFS The Major Facilita 100.0 3.9E-31 8.4E-36 244.8 34.6 340 12-426 3-348 (352)
61 TIGR00885 fucP L-fucose:H+ sym 100.0 1.4E-30 3.1E-35 244.0 38.7 347 10-398 5-382 (410)
62 PRK11043 putative transporter; 100.0 3.1E-30 6.8E-35 242.9 39.8 340 9-396 7-356 (401)
63 PRK11010 ampG muropeptide tran 100.0 9.4E-30 2E-34 243.9 41.0 375 9-431 13-404 (491)
64 PRK15034 nitrate/nitrite trans 100.0 6.7E-30 1.5E-34 236.8 38.2 365 7-428 33-452 (462)
65 TIGR00883 2A0106 metabolite-pr 100.0 2.3E-30 5E-35 243.6 33.3 350 18-398 3-376 (394)
66 TIGR00896 CynX cyanate transpo 100.0 1.8E-30 3.9E-35 240.5 31.6 331 22-401 14-352 (355)
67 PRK09528 lacY galactoside perm 100.0 2.8E-30 6E-35 244.6 32.8 358 7-398 9-379 (420)
68 PRK11128 putative 3-phenylprop 100.0 1E-29 2.2E-34 237.5 36.0 335 16-398 12-356 (382)
69 PRK06814 acylglycerophosphoeth 100.0 2.6E-30 5.6E-35 273.7 35.8 359 7-397 10-396 (1140)
70 TIGR00886 2A0108 nitrite extru 100.0 1.6E-30 3.5E-35 242.1 30.0 342 10-383 3-365 (366)
71 KOG2532 Permease of the major 100.0 3.8E-31 8.3E-36 246.9 24.4 365 43-429 65-446 (466)
72 KOG2615 Permease of the major 100.0 2.5E-31 5.5E-36 229.7 20.9 337 45-400 62-417 (451)
73 PRK08633 2-acyl-glycerophospho 100.0 9.1E-30 2E-34 270.6 37.5 358 7-396 8-383 (1146)
74 PRK11902 ampG muropeptide tran 100.0 1E-28 2.2E-33 232.3 40.4 369 14-434 5-394 (402)
75 TIGR00889 2A0110 nucleoside tr 100.0 2.9E-29 6.2E-34 236.2 34.8 371 13-431 7-403 (418)
76 KOG0569 Permease of the major 100.0 3.2E-29 7E-34 231.0 34.0 379 44-436 54-460 (485)
77 TIGR00882 2A0105 oligosacchari 100.0 4.7E-29 1E-33 234.4 34.4 357 8-398 2-371 (396)
78 TIGR00901 2A0125 AmpG-related 100.0 2.8E-29 6.1E-34 232.7 31.8 318 24-381 4-355 (356)
79 KOG1330 Sugar transporter/spin 100.0 7.7E-31 1.7E-35 233.2 13.7 365 5-402 30-417 (493)
80 KOG3764 Vesicular amine transp 100.0 3.7E-30 8.1E-35 223.8 15.6 351 11-398 24-430 (464)
81 COG0738 FucP Fucose permease [ 100.0 6E-27 1.3E-31 205.5 34.6 350 8-399 13-386 (422)
82 TIGR00924 yjdL_sub1_fam amino 100.0 3.2E-27 6.9E-32 225.3 35.1 380 5-396 7-442 (475)
83 TIGR00792 gph sugar (Glycoside 100.0 2.5E-27 5.5E-32 226.0 34.2 344 19-399 10-382 (437)
84 TIGR02718 sider_RhtX_FptX side 100.0 4.2E-26 9.1E-31 213.9 40.1 348 10-398 3-367 (390)
85 PRK10207 dipeptide/tripeptide 100.0 4.8E-26 1E-30 217.2 34.1 375 1-394 7-438 (489)
86 TIGR01301 GPH_sucrose GPH fami 100.0 3.6E-25 7.9E-30 206.9 38.7 394 10-435 6-476 (477)
87 KOG2533 Permease of the major 100.0 1.1E-26 2.4E-31 217.3 27.6 314 43-370 73-402 (495)
88 PF03825 Nuc_H_symport: Nucleo 100.0 9.1E-25 2E-29 201.9 35.1 344 13-399 7-366 (400)
89 KOG0254 Predicted transporter 99.9 2E-25 4.3E-30 215.8 28.4 363 24-397 63-457 (513)
90 KOG2504 Monocarboxylate transp 99.9 2.5E-25 5.5E-30 210.5 27.7 367 45-418 75-471 (509)
91 COG2807 CynX Cyanate permease 99.9 5.6E-24 1.2E-28 184.0 32.4 340 12-400 12-362 (395)
92 KOG0255 Synaptic vesicle trans 99.9 4.1E-25 8.9E-30 214.9 28.5 339 47-396 114-467 (521)
93 PF01306 LacY_symp: LacY proto 99.9 1.1E-23 2.4E-28 190.8 34.6 384 6-431 5-401 (412)
94 PF11700 ATG22: Vacuole efflux 99.9 3.1E-23 6.6E-28 195.3 38.4 353 50-433 69-471 (477)
95 PF00083 Sugar_tr: Sugar (and 99.9 9.2E-31 2E-35 250.5 -14.3 403 15-434 7-440 (451)
96 KOG0252 Inorganic phosphate tr 99.9 1.7E-26 3.8E-31 204.7 13.8 415 10-430 43-498 (538)
97 TIGR00806 rfc RFC reduced fola 99.9 4.2E-24 9E-29 194.4 29.5 404 3-424 22-442 (511)
98 PRK10429 melibiose:sodium symp 99.9 3.4E-23 7.3E-28 198.5 35.2 350 15-399 13-395 (473)
99 PRK09584 tppB putative tripept 99.9 2E-23 4.3E-28 200.5 32.8 372 7-396 20-439 (500)
100 TIGR00805 oat sodium-independe 99.9 4.2E-25 9.1E-30 216.4 21.0 298 16-329 41-415 (633)
101 PF06609 TRI12: Fungal trichot 99.9 1.1E-22 2.3E-27 192.8 33.3 362 21-398 57-468 (599)
102 PRK09848 glucuronide transport 99.9 1.6E-22 3.4E-27 193.2 34.4 346 14-399 14-390 (448)
103 COG2270 Permeases of the major 99.9 2.8E-23 6.1E-28 183.8 26.6 376 25-432 32-431 (438)
104 PRK09669 putative symporter Ya 99.9 2.2E-22 4.8E-27 191.8 34.6 336 24-399 25-390 (444)
105 PF13347 MFS_2: MFS/sugar tran 99.9 3.1E-23 6.7E-28 196.7 28.5 324 45-399 31-386 (428)
106 KOG0253 Synaptic vesicle trans 99.9 1.8E-23 3.9E-28 180.1 23.7 370 43-432 105-521 (528)
107 KOG2816 Predicted transporter 99.9 4.8E-22 1E-26 185.0 29.7 374 11-406 21-401 (463)
108 TIGR00788 fbt folate/biopterin 99.9 2.5E-22 5.4E-27 191.3 26.8 391 13-430 31-446 (468)
109 TIGR01272 gluP glucose/galacto 99.9 3.4E-21 7.3E-26 173.5 29.7 259 107-398 10-291 (310)
110 PF03209 PUCC: PUCC protein; 99.9 6.4E-20 1.4E-24 163.3 36.1 360 44-432 8-400 (403)
111 PTZ00207 hypothetical protein; 99.9 4.8E-20 1E-24 176.1 34.5 374 45-427 56-549 (591)
112 COG2211 MelB Na+/melibiose sym 99.9 1E-19 2.2E-24 166.7 34.0 351 15-400 19-399 (467)
113 PRK15462 dipeptide/tripeptide 99.9 9.7E-20 2.1E-24 171.3 34.2 378 6-398 7-437 (493)
114 KOG4686 Predicted sugar transp 99.9 1.1E-21 2.4E-26 163.2 16.3 355 44-433 72-446 (459)
115 PRK11462 putative transporter; 99.9 5.5E-19 1.2E-23 168.3 37.1 342 16-398 17-388 (460)
116 KOG2325 Predicted transporter/ 99.9 1.3E-20 2.9E-25 172.8 24.0 361 7-398 33-451 (488)
117 COG3104 PTR2 Dipeptide/tripept 99.7 1.4E-15 3E-20 138.4 26.2 373 7-392 20-451 (498)
118 KOG2563 Permease of the major 99.7 7.5E-16 1.6E-20 137.7 23.8 323 50-399 78-423 (480)
119 PF03137 OATP: Organic Anion T 99.7 5.6E-19 1.2E-23 168.9 0.0 374 14-397 9-514 (539)
120 PF03092 BT1: BT1 family; Int 99.6 1.4E-13 3.1E-18 129.6 25.5 369 45-431 19-414 (433)
121 PRK10054 putative transporter; 99.6 3.1E-14 6.7E-19 133.6 20.3 151 245-396 6-157 (395)
122 PF05631 DUF791: Protein of un 99.6 5.2E-13 1.1E-17 117.6 24.8 273 14-328 40-324 (354)
123 TIGR00880 2_A_01_02 Multidrug 99.6 6.7E-15 1.4E-19 116.8 9.9 132 58-193 5-140 (141)
124 TIGR00889 2A0110 nucleoside tr 99.6 4.1E-14 8.8E-19 133.6 16.6 186 12-198 212-409 (418)
125 KOG3626 Organic anion transpor 99.6 6.4E-14 1.4E-18 134.4 17.8 367 14-398 103-650 (735)
126 PF01770 Folate_carrier: Reduc 99.6 1.7E-11 3.7E-16 111.2 32.0 367 5-386 2-391 (412)
127 PRK11646 multidrug resistance 99.6 3.5E-13 7.7E-18 126.6 19.7 147 249-396 13-160 (400)
128 PRK10642 proline/glycine betai 99.6 3E-13 6.5E-18 130.6 19.6 167 20-198 262-436 (490)
129 TIGR00924 yjdL_sub1_fam amino 99.5 2.7E-13 6E-18 129.8 18.3 153 244-397 8-167 (475)
130 TIGR01299 synapt_SV2 synaptic 99.5 5.1E-13 1.1E-17 132.2 19.2 139 53-196 597-738 (742)
131 PRK15462 dipeptide/tripeptide 99.5 1.2E-12 2.7E-17 123.5 19.5 153 244-397 7-164 (493)
132 PRK09874 drug efflux system pr 99.5 5.5E-13 1.2E-17 126.1 17.2 170 18-195 229-402 (408)
133 PRK11663 regulatory protein Uh 99.5 1.6E-12 3.4E-17 123.8 18.8 148 248-397 25-173 (434)
134 TIGR00900 2A0121 H+ Antiporter 99.5 1.3E-12 2.8E-17 121.6 17.7 146 251-398 4-155 (365)
135 PRK09528 lacY galactoside perm 99.5 2.4E-13 5.2E-18 129.0 13.0 160 29-196 244-408 (420)
136 PRK03545 putative arabinose tr 99.5 2.4E-12 5.1E-17 120.9 19.1 130 266-397 29-159 (390)
137 TIGR00710 efflux_Bcr_CflA drug 99.5 2.1E-12 4.5E-17 121.2 18.5 144 252-397 11-155 (385)
138 PF07690 MFS_1: Major Facilita 99.5 1.4E-12 3.1E-17 120.6 17.1 145 252-397 2-147 (352)
139 PRK11195 lysophospholipid tran 99.5 1.9E-12 4.2E-17 121.4 17.3 149 245-397 2-150 (393)
140 PRK10213 nepI ribonucleoside t 99.5 6.2E-12 1.3E-16 118.0 20.7 132 264-397 38-170 (394)
141 PRK03633 putative MFS family t 99.5 3.7E-12 8E-17 119.2 18.5 151 245-397 5-156 (381)
142 PRK10504 putative transporter; 99.5 4.4E-12 9.5E-17 122.3 19.1 150 246-397 10-160 (471)
143 PRK05122 major facilitator sup 99.5 4.4E-12 9.5E-17 119.6 18.7 162 20-196 228-393 (399)
144 PRK09584 tppB putative tripept 99.5 8.5E-12 1.8E-16 120.3 20.7 155 243-398 18-177 (500)
145 PF06963 FPN1: Ferroportin1 (F 99.5 3.6E-10 7.9E-15 104.6 30.4 368 8-389 2-410 (432)
146 TIGR02332 HpaX 4-hydroxyphenyl 99.5 6.9E-12 1.5E-16 118.4 19.7 141 254-396 16-157 (412)
147 PRK10091 MFS transport protein 99.5 5.1E-12 1.1E-16 118.3 18.7 150 246-397 3-153 (382)
148 PRK12382 putative transporter; 99.5 5.5E-12 1.2E-16 118.6 18.9 152 245-397 14-174 (392)
149 PRK10207 dipeptide/tripeptide 99.5 5.1E-12 1.1E-16 121.2 18.8 154 244-398 12-170 (489)
150 COG2814 AraJ Arabinose efflux 99.4 1.3E-11 2.7E-16 111.6 19.6 176 246-431 13-189 (394)
151 PRK11551 putative 3-hydroxyphe 99.4 5.4E-12 1.2E-16 119.2 17.3 155 23-189 235-394 (406)
152 PRK15011 sugar efflux transpor 99.4 7.2E-12 1.6E-16 117.7 17.4 159 22-193 230-392 (393)
153 PRK14995 methyl viologen resis 99.4 1.3E-11 2.9E-16 119.3 19.4 149 247-397 7-157 (495)
154 TIGR00892 2A0113 monocarboxyla 99.4 1.3E-12 2.8E-17 124.9 12.2 164 10-185 243-415 (455)
155 PRK10489 enterobactin exporter 99.4 1E-11 2.2E-16 117.7 18.2 160 27-197 242-405 (417)
156 cd06174 MFS The Major Facilita 99.4 4.7E-12 1E-16 117.0 15.6 167 9-186 176-347 (352)
157 TIGR00711 efflux_EmrB drug res 99.4 8.8E-12 1.9E-16 120.8 17.8 146 250-397 6-152 (485)
158 TIGR00886 2A0108 nitrite extru 99.4 2.5E-11 5.5E-16 113.0 19.9 149 248-398 3-153 (366)
159 PRK03699 putative transporter; 99.4 1.8E-11 4E-16 115.0 18.7 148 248-397 9-157 (394)
160 TIGR00891 2A0112 putative sial 99.4 1.8E-11 3.8E-16 115.7 18.7 148 248-397 14-162 (405)
161 PRK03893 putative sialic acid 99.4 8.9E-12 1.9E-16 121.1 16.9 144 27-179 294-441 (496)
162 PRK10473 multidrug efflux syst 99.4 2.4E-11 5.1E-16 114.3 19.2 150 246-397 3-153 (392)
163 PRK11043 putative transporter; 99.4 3E-11 6.6E-16 113.9 19.6 144 253-397 10-156 (401)
164 TIGR00890 2A0111 Oxalate/Forma 99.4 4.1E-12 8.9E-17 118.7 13.4 164 10-183 207-374 (377)
165 PRK15034 nitrate/nitrite trans 99.4 5.3E-11 1.2E-15 111.3 20.5 148 246-395 34-187 (462)
166 PLN00028 nitrate transmembrane 99.4 8.2E-11 1.8E-15 113.1 22.1 131 264-397 54-185 (476)
167 TIGR00902 2A0127 phenyl propri 99.4 1.9E-11 4E-16 114.4 17.2 163 8-184 205-372 (382)
168 TIGR00895 2A0115 benzoate tran 99.4 1.2E-11 2.7E-16 116.4 15.5 136 260-397 31-167 (398)
169 TIGR00897 2A0118 polyol permea 99.4 4.1E-11 8.9E-16 112.9 18.6 151 245-397 12-168 (402)
170 PRK15402 multidrug efflux syst 99.4 5.3E-11 1.2E-15 112.4 19.4 135 261-397 28-163 (406)
171 TIGR00899 2A0120 sugar efflux 99.4 4.7E-11 1E-15 111.6 18.6 168 252-428 3-174 (375)
172 TIGR00893 2A0114 d-galactonate 99.4 1.9E-11 4.2E-16 114.9 16.1 130 266-397 14-144 (399)
173 KOG3762 Predicted transporter 99.4 3.3E-11 7.1E-16 110.4 16.4 176 242-427 367-544 (618)
174 KOG0637 Sucrose transporter an 99.4 1E-11 2.3E-16 111.6 12.8 379 8-402 32-475 (498)
175 COG2271 UhpC Sugar phosphate p 99.4 2.2E-11 4.8E-16 108.8 14.6 144 252-397 35-181 (448)
176 PRK11102 bicyclomycin/multidru 99.4 3.6E-11 7.8E-16 112.5 17.0 133 263-397 8-141 (377)
177 PF05977 MFS_3: Transmembrane 99.3 1.1E-10 2.3E-15 112.0 19.8 166 10-186 220-389 (524)
178 PRK11652 emrD multidrug resist 99.3 9E-11 1.9E-15 110.5 18.7 143 253-397 15-158 (394)
179 PRK09556 uhpT sugar phosphate 99.3 5.8E-11 1.3E-15 114.2 16.7 133 263-397 46-184 (467)
180 PRK09705 cynX putative cyanate 99.3 1.8E-10 3.9E-15 108.2 19.4 132 263-397 26-158 (393)
181 PRK12307 putative sialic acid 99.3 9.7E-11 2.1E-15 111.5 17.6 148 248-397 20-168 (426)
182 PRK15403 multidrug efflux syst 99.3 2.2E-10 4.8E-15 108.2 19.3 135 261-397 31-166 (413)
183 TIGR00903 2A0129 major facilit 99.3 1.4E-10 2.9E-15 107.4 17.5 134 261-397 6-140 (368)
184 TIGR00881 2A0104 phosphoglycer 99.3 2.3E-11 4.9E-16 113.8 12.1 137 258-396 7-145 (379)
185 TIGR00879 SP MFS transporter, 99.3 4.4E-11 9.5E-16 115.6 14.4 149 47-196 315-475 (481)
186 TIGR00712 glpT glycerol-3-phos 99.3 1.6E-10 3.4E-15 110.3 17.8 130 265-397 46-180 (438)
187 TIGR00769 AAA ADP/ATP carrier 99.3 1.7E-07 3.7E-12 88.1 37.0 358 8-395 7-437 (472)
188 TIGR00885 fucP L-fucose:H+ sym 99.3 3.6E-10 7.7E-15 106.4 19.5 148 248-397 5-156 (410)
189 TIGR00882 2A0105 oligosacchari 99.3 1.7E-10 3.6E-15 108.7 17.1 150 245-397 1-159 (396)
190 TIGR00806 rfc RFC reduced fola 99.3 3E-10 6.5E-15 104.6 17.8 131 263-395 42-174 (511)
191 TIGR00883 2A0106 metabolite-pr 99.3 9E-11 2E-15 110.3 14.1 159 10-179 221-389 (394)
192 PRK09952 shikimate transporter 99.2 6.9E-10 1.5E-14 105.7 18.9 168 18-194 260-435 (438)
193 PRK10133 L-fucose transporter; 99.2 1.6E-09 3.4E-14 103.0 20.7 146 248-395 28-177 (438)
194 PRK11128 putative 3-phenylprop 99.2 5.3E-10 1.2E-14 104.7 17.2 161 9-183 206-371 (382)
195 PF11700 ATG22: Vacuole efflux 99.2 7.5E-10 1.6E-14 105.0 18.0 177 7-195 280-471 (477)
196 PRK11273 glpT sn-glycerol-3-ph 99.2 9.8E-10 2.1E-14 105.2 18.9 122 267-391 50-176 (452)
197 COG3104 PTR2 Dipeptide/tripept 99.2 6.2E-10 1.4E-14 102.0 16.4 182 243-433 18-209 (498)
198 PRK11010 ampG muropeptide tran 99.2 8.7E-09 1.9E-13 99.4 24.0 145 45-194 252-405 (491)
199 KOG3098 Uncharacterized conser 99.2 8E-08 1.7E-12 89.1 28.8 305 57-393 56-410 (461)
200 PRK10406 alpha-ketoglutarate t 99.2 3.3E-09 7.2E-14 101.0 20.2 129 266-395 41-184 (432)
201 PF02487 CLN3: CLN3 protein; 99.2 2E-08 4.3E-13 91.5 23.6 322 54-394 62-394 (402)
202 TIGR00880 2_A_01_02 Multidrug 99.2 2.7E-10 5.8E-15 90.1 10.3 107 290-397 6-113 (141)
203 PTZ00207 hypothetical protein; 99.2 4.3E-09 9.4E-14 101.5 19.8 124 270-396 50-180 (591)
204 PRK11902 ampG muropeptide tran 99.2 3.2E-09 7E-14 100.1 18.7 142 252-397 5-156 (402)
205 PRK10077 xylE D-xylose transpo 99.1 2.7E-09 5.8E-14 103.3 17.9 117 278-395 51-180 (479)
206 TIGR00901 2A0125 AmpG-related 99.1 3.6E-09 7.7E-14 98.1 17.7 160 264-427 6-175 (356)
207 TIGR00896 CynX cyanate transpo 99.1 2.3E-09 5E-14 99.4 16.3 131 263-397 17-148 (355)
208 PF03825 Nuc_H_symport: Nucleo 99.1 3.8E-09 8.2E-14 98.3 17.5 179 9-195 208-399 (400)
209 TIGR02718 sider_RhtX_FptX side 99.1 2E-09 4.3E-14 101.1 16.0 164 10-185 210-385 (390)
210 KOG3810 Micronutrient transpor 99.1 6E-09 1.3E-13 90.5 16.5 350 65-430 56-421 (433)
211 KOG1330 Sugar transporter/spin 99.1 9.6E-11 2.1E-15 105.8 5.9 149 248-398 35-184 (493)
212 KOG3764 Vesicular amine transp 99.1 7.3E-10 1.6E-14 98.1 11.1 144 277-429 101-246 (464)
213 TIGR00805 oat sodium-independe 99.1 5.9E-10 1.3E-14 110.2 11.0 136 263-399 49-236 (633)
214 PRK08633 2-acyl-glycerophospho 99.1 2.4E-09 5.2E-14 114.9 16.6 162 10-182 234-401 (1146)
215 TIGR00898 2A0119 cation transp 99.1 3.2E-09 7E-14 103.4 15.8 135 59-196 363-499 (505)
216 KOG2615 Permease of the major 99.1 1.3E-09 2.8E-14 96.0 11.4 117 278-396 64-181 (451)
217 PRK15075 citrate-proton sympor 99.1 7.8E-09 1.7E-13 98.5 17.9 147 248-396 17-178 (434)
218 COG2270 Permeases of the major 99.1 1.9E-09 4.1E-14 96.7 12.6 176 7-194 251-431 (438)
219 PF01306 LacY_symp: LacY proto 99.1 1.5E-08 3.3E-13 92.8 18.1 183 8-198 220-407 (412)
220 TIGR00887 2A0109 phosphate:H+ 99.1 1.5E-08 3.4E-13 98.4 19.5 143 253-396 23-176 (502)
221 COG2223 NarK Nitrate/nitrite t 99.1 5.2E-09 1.1E-13 93.9 14.6 149 246-398 14-166 (417)
222 TIGR00792 gph sugar (Glycoside 99.1 3.7E-09 7.9E-14 101.0 14.6 149 8-167 222-377 (437)
223 TIGR00894 2A0114euk Na(+)-depe 99.0 2.4E-09 5.1E-14 103.1 13.2 121 276-397 70-193 (465)
224 PRK06814 acylglycerophosphoeth 99.0 6.1E-09 1.3E-13 111.5 15.7 160 9-179 226-410 (1140)
225 TIGR01301 GPH_sucrose GPH fami 99.0 1.9E-08 4.1E-13 95.0 16.8 145 248-394 6-175 (477)
226 COG0738 FucP Fucose permease [ 99.0 3.8E-08 8.2E-13 87.9 16.2 143 254-397 20-166 (422)
227 KOG2504 Monocarboxylate transp 99.0 9.4E-09 2E-13 98.3 13.0 172 8-192 298-476 (509)
228 PRK09848 glucuronide transport 98.9 4.9E-09 1.1E-13 100.4 10.9 150 8-166 228-384 (448)
229 KOG0569 Permease of the major 98.9 7.7E-08 1.7E-12 90.1 17.0 153 45-198 299-461 (485)
230 PF13347 MFS_2: MFS/sugar tran 98.9 5.3E-08 1.1E-12 92.7 15.4 148 7-166 224-380 (428)
231 TIGR01272 gluP glucose/galacto 98.9 1.1E-07 2.5E-12 85.8 16.2 157 9-177 141-301 (310)
232 PRK10429 melibiose:sodium symp 98.8 3.2E-08 6.8E-13 95.4 12.6 150 7-166 230-389 (473)
233 COG0477 ProP Permeases of the 98.8 2.5E-07 5.4E-12 83.7 16.8 161 13-181 7-175 (338)
234 PF06609 TRI12: Fungal trichot 98.8 2.4E-07 5.3E-12 89.1 16.9 123 266-392 64-187 (599)
235 PRK09669 putative symporter Ya 98.8 7.5E-08 1.6E-12 92.1 11.7 144 255-399 18-174 (444)
236 KOG2532 Permease of the major 98.7 1E-07 2.2E-12 90.1 12.2 123 274-397 65-190 (466)
237 KOG3574 Acetyl-CoA transporter 98.7 4.7E-06 1E-10 73.9 21.1 351 7-399 30-433 (510)
238 PF06813 Nodulin-like: Nodulin 98.7 5.4E-06 1.2E-10 71.2 21.2 149 45-196 31-186 (250)
239 TIGR00926 2A1704 Peptide:H+ sy 98.7 7E-06 1.5E-10 81.0 24.9 140 47-187 19-178 (654)
240 KOG4686 Predicted sugar transp 98.7 3.5E-07 7.6E-12 77.6 13.3 146 9-167 265-411 (459)
241 KOG0254 Predicted transporter 98.7 1.6E-06 3.4E-11 84.5 19.2 111 283-395 90-201 (513)
242 PF13000 Acatn: Acetyl-coenzym 98.7 2.7E-05 5.8E-10 72.0 25.3 373 12-398 4-468 (544)
243 KOG4332 Predicted sugar transp 98.7 2.5E-07 5.5E-12 77.7 11.1 291 51-379 72-388 (454)
244 PF05631 DUF791: Protein of un 98.7 1.1E-05 2.3E-10 72.0 21.5 149 276-432 63-218 (354)
245 TIGR00788 fbt folate/biopterin 98.6 2E-07 4.3E-12 89.4 11.1 120 44-167 281-410 (468)
246 KOG3762 Predicted transporter 98.6 2.5E-07 5.5E-12 85.5 11.1 161 14-186 377-542 (618)
247 KOG0253 Synaptic vesicle trans 98.6 2E-07 4.3E-12 82.1 9.6 129 61-194 391-522 (528)
248 KOG2533 Permease of the major 98.6 9.8E-07 2.1E-11 83.8 15.1 150 275-427 74-224 (495)
249 KOG0255 Synaptic vesicle trans 98.6 3.7E-07 8.1E-12 89.3 12.4 121 275-397 111-232 (521)
250 PRK11462 putative transporter; 98.6 1.3E-06 2.7E-11 83.8 15.1 146 253-399 16-174 (460)
251 PF03219 TLC: TLC ATP/ADP tran 98.6 0.00076 1.6E-08 64.2 33.2 237 63-318 71-354 (491)
252 COG2211 MelB Na+/melibiose sym 98.5 7E-07 1.5E-11 83.0 10.9 151 7-166 235-392 (467)
253 COG2807 CynX Cyanate permease 98.5 4.6E-06 1E-10 73.8 14.8 166 11-189 211-383 (395)
254 PF06813 Nodulin-like: Nodulin 98.5 1.2E-05 2.5E-10 69.2 15.8 125 268-395 23-155 (250)
255 PF03209 PUCC: PUCC protein; 98.4 1.4E-05 3.1E-10 72.4 16.0 167 11-185 211-392 (403)
256 TIGR00926 2A1704 Peptide:H+ sy 98.4 1.9E-05 4.2E-10 78.0 17.2 166 261-428 2-180 (654)
257 PF12832 MFS_1_like: MFS_1 lik 98.3 2.4E-06 5.2E-11 58.7 6.6 68 15-90 7-74 (77)
258 PF06779 DUF1228: Protein of u 98.3 4.2E-06 9E-11 57.9 6.9 75 21-103 5-79 (85)
259 PF05978 UNC-93: Ion channel r 98.3 2.2E-05 4.7E-10 62.2 11.9 102 58-164 44-145 (156)
260 KOG2325 Predicted transporter/ 98.2 6.5E-05 1.4E-09 70.3 15.3 149 246-396 34-190 (488)
261 KOG2563 Permease of the major 98.2 4.8E-05 1E-09 69.5 13.8 148 248-397 43-202 (480)
262 KOG0252 Inorganic phosphate tr 98.2 1.7E-05 3.7E-10 72.3 10.7 118 279-397 81-206 (538)
263 PF12832 MFS_1_like: MFS_1 lik 98.2 2.7E-05 5.8E-10 53.5 9.1 70 251-322 5-74 (77)
264 TIGR00939 2a57 Equilibrative N 98.0 0.001 2.3E-08 62.8 19.8 50 341-390 378-427 (437)
265 KOG3880 Predicted small molecu 98.0 3.2E-05 6.9E-10 66.6 7.6 320 54-396 65-403 (409)
266 PF03092 BT1: BT1 family; Int 97.9 0.00038 8.3E-09 66.0 15.7 131 266-398 9-151 (433)
267 PF00083 Sugar_tr: Sugar (and 97.9 3.6E-07 7.9E-12 87.7 -4.9 111 282-393 46-160 (451)
268 KOG2816 Predicted transporter 97.9 0.00032 7E-09 66.4 14.4 128 292-430 72-199 (463)
269 PF05978 UNC-93: Ion channel r 97.9 0.00088 1.9E-08 53.1 14.5 105 290-396 45-150 (156)
270 COG3202 ATP/ADP translocase [E 97.8 0.027 5.9E-07 52.6 32.7 329 51-397 61-459 (509)
271 KOG1479 Nucleoside transporter 97.8 0.005 1.1E-07 56.3 19.0 130 262-395 259-402 (406)
272 PF00854 PTR2: POT family; In 97.6 0.0011 2.4E-08 61.9 12.1 104 82-186 2-118 (372)
273 COG0477 ProP Permeases of the 97.6 0.005 1.1E-07 55.2 16.2 136 260-397 16-158 (338)
274 PF01770 Folate_carrier: Reduc 97.5 0.0092 2E-07 55.1 17.0 138 258-396 15-154 (412)
275 PF06779 DUF1228: Protein of u 97.4 0.0021 4.5E-08 44.7 8.7 77 260-338 6-82 (85)
276 KOG1237 H+/oligopeptide sympor 97.4 0.05 1.1E-06 53.3 21.4 129 56-185 78-239 (571)
277 TIGR00769 AAA ADP/ATP carrier 97.3 0.027 5.8E-07 53.6 18.1 125 273-397 29-191 (472)
278 PRK03612 spermidine synthase; 97.2 0.052 1.1E-06 52.7 19.5 145 251-397 19-171 (521)
279 PF03137 OATP: Organic Anion T 97.2 7.1E-05 1.5E-09 72.6 -0.5 139 260-399 16-205 (539)
280 KOG0637 Sucrose transporter an 97.1 0.00051 1.1E-08 63.0 3.9 144 247-392 33-200 (498)
281 KOG3098 Uncharacterized conser 97.0 0.017 3.7E-07 54.3 13.5 109 54-164 282-408 (461)
282 KOG3626 Organic anion transpor 96.9 0.0035 7.5E-08 61.8 8.2 186 245-431 95-344 (735)
283 PF02487 CLN3: CLN3 protein; 96.9 0.032 7E-07 51.5 14.0 110 50-167 280-394 (402)
284 PF07672 MFS_Mycoplasma: Mycop 96.6 0.26 5.7E-06 42.3 16.0 50 140-189 2-60 (267)
285 PF06963 FPN1: Ferroportin1 (F 96.5 0.64 1.4E-05 43.9 19.3 172 247-427 3-197 (432)
286 PRK03612 spermidine synthase; 96.3 0.29 6.3E-06 47.7 16.7 117 47-166 46-167 (521)
287 PF01733 Nucleoside_tran: Nucl 96.1 0.0019 4E-08 58.4 0.6 50 341-390 254-303 (309)
288 PF00854 PTR2: POT family; In 95.8 0.075 1.6E-06 49.6 9.9 110 314-431 2-124 (372)
289 KOG2601 Iron transporter [Inor 95.8 0.21 4.6E-06 45.1 11.7 76 9-91 28-103 (503)
290 KOG3574 Acetyl-CoA transporter 94.8 0.47 1E-05 43.2 10.9 142 245-391 30-189 (510)
291 KOG4332 Predicted sugar transp 94.2 0.2 4.3E-06 43.1 6.9 126 271-398 61-194 (454)
292 TIGR00939 2a57 Equilibrative N 93.9 0.78 1.7E-05 43.6 11.1 149 8-164 269-428 (437)
293 KOG4830 Predicted sugar transp 93.4 0.017 3.8E-07 48.9 -0.6 145 243-387 198-347 (412)
294 PF03219 TLC: TLC ATP/ADP tran 92.3 7.7 0.00017 37.5 15.3 117 280-396 56-205 (491)
295 KOG1237 H+/oligopeptide sympor 91.9 4.3 9.4E-05 40.1 13.3 146 249-395 40-218 (571)
296 PF07857 DUF1632: CEO family ( 90.3 11 0.00025 32.6 14.8 30 261-290 193-226 (254)
297 KOG3097 Predicted membrane pro 88.5 19 0.00041 32.6 18.4 70 64-138 71-140 (390)
298 COG3202 ATP/ADP translocase [E 86.9 30 0.00064 33.2 17.1 118 279-397 58-210 (509)
299 KOG3880 Predicted small molecu 85.8 2.9 6.3E-05 37.1 6.4 73 89-165 327-399 (409)
300 KOG1479 Nucleoside transporter 85.4 14 0.0003 34.5 11.0 128 27-164 262-399 (406)
301 KOG2881 Predicted membrane pro 84.5 12 0.00027 32.0 9.3 23 301-323 258-280 (294)
302 PF01733 Nucleoside_tran: Nucl 78.4 0.78 1.7E-05 41.5 0.4 149 9-164 144-304 (309)
303 COG4262 Predicted spermidine s 76.8 61 0.0013 29.7 14.1 125 269-396 30-164 (508)
304 KOG3097 Predicted membrane pro 73.7 40 0.00086 30.6 9.4 94 301-395 76-181 (390)
305 PF02990 EMP70: Endomembrane p 69.9 93 0.002 30.6 12.3 24 288-312 303-326 (521)
306 COG5336 Uncharacterized protei 69.5 14 0.00031 26.8 4.8 38 51-88 42-80 (116)
307 KOG3810 Micronutrient transpor 67.8 38 0.00082 31.1 8.1 98 51-152 271-370 (433)
308 PRK15015 carbon starvation pro 65.1 1.6E+02 0.0034 29.7 19.9 102 61-170 11-114 (701)
309 TIGR02840 spore_YtaF putative 64.1 87 0.0019 26.3 15.2 49 277-326 152-202 (206)
310 COG3559 TnrB3 Putative exporte 62.1 1.4E+02 0.0031 28.1 15.3 59 245-303 297-365 (536)
311 PF02554 CstA: Carbon starvati 55.8 1.7E+02 0.0037 27.1 18.5 36 135-171 48-84 (376)
312 COG5336 Uncharacterized protei 53.1 83 0.0018 23.0 6.2 34 367-400 38-71 (116)
313 COG2233 UraA Xanthine/uracil p 52.6 2.2E+02 0.0048 27.3 12.4 121 253-374 20-144 (451)
314 PF02694 UPF0060: Uncharacteri 49.7 41 0.00088 24.5 4.3 51 282-333 54-104 (107)
315 PRK02237 hypothetical protein; 45.9 70 0.0015 23.4 5.0 51 282-333 56-106 (109)
316 PF06783 UPF0239: Uncharacteri 45.3 61 0.0013 22.5 4.4 20 170-189 23-42 (85)
317 PRK11469 hypothetical protein; 43.8 1.9E+02 0.004 24.0 19.1 53 278-330 130-182 (188)
318 PF11872 DUF3392: Protein of u 40.5 1.5E+02 0.0032 21.8 6.6 36 242-277 45-80 (106)
319 TIGR03173 pbuX xanthine permea 40.5 3.3E+02 0.007 25.8 13.8 103 267-371 13-117 (406)
320 TIGR01478 STEVOR variant surfa 40.0 60 0.0013 28.4 4.7 30 409-438 262-291 (295)
321 PTZ00370 STEVOR; Provisional 39.5 54 0.0012 28.8 4.3 30 409-438 258-287 (296)
322 COG1983 PspC Putative stress-r 35.2 1.1E+02 0.0024 20.5 4.3 17 181-197 50-66 (70)
323 PF11947 DUF3464: Protein of u 35.1 2.2E+02 0.0048 22.6 6.8 33 354-386 113-145 (153)
324 COG4262 Predicted spermidine s 33.9 3.9E+02 0.0085 24.8 13.2 84 51-135 43-132 (508)
325 PF04024 PspC: PspC domain; I 33.2 1.2E+02 0.0026 19.6 4.3 26 170-195 32-60 (61)
326 PF04341 DUF485: Protein of un 32.6 1.8E+02 0.0039 20.6 5.9 49 245-293 15-63 (91)
327 PF13000 Acatn: Acetyl-coenzym 31.7 5.1E+02 0.011 25.5 12.4 51 107-158 405-455 (544)
328 PF02694 UPF0060: Uncharacteri 31.5 66 0.0014 23.5 3.1 50 53-102 56-105 (107)
329 KOG2601 Iron transporter [Inor 31.2 4.6E+02 0.0099 24.8 14.2 149 249-398 30-202 (503)
330 TIGR00814 stp serine transport 29.8 4.9E+02 0.011 24.6 18.3 33 138-170 2-34 (397)
331 PRK11715 inner membrane protei 29.0 5.3E+02 0.011 24.8 13.2 65 310-377 329-393 (436)
332 COG2836 Uncharacterized conser 28.0 3.8E+02 0.0083 22.9 16.9 33 278-311 160-192 (232)
333 PRK13629 threonine/serine tran 26.6 5.9E+02 0.013 24.5 17.7 41 138-179 18-58 (443)
334 TIGR01666 YCCS hypothetical me 26.3 7.4E+02 0.016 25.6 10.7 48 70-119 42-93 (704)
335 PF06123 CreD: Inner membrane 26.3 5.9E+02 0.013 24.4 13.8 64 310-376 323-386 (430)
336 PF06912 DUF1275: Protein of u 26.2 3.9E+02 0.0084 22.3 15.0 23 147-169 169-191 (209)
337 PF01102 Glycophorin_A: Glycop 26.1 93 0.002 23.5 3.3 7 426-432 85-91 (122)
338 PF13536 EmrE: Multidrug resis 25.3 2.8E+02 0.006 20.3 8.5 19 308-326 84-102 (113)
339 PF07760 DUF1616: Protein of u 24.8 5E+02 0.011 23.2 10.5 56 110-167 22-77 (287)
340 COG1268 BioY Uncharacterized c 24.8 1.5E+02 0.0033 24.4 4.5 21 60-80 91-111 (184)
341 PRK02237 hypothetical protein; 24.4 1.3E+02 0.0028 22.1 3.5 50 53-102 58-107 (109)
342 PF10183 ESSS: ESSS subunit of 23.7 1.4E+02 0.0029 22.0 3.7 29 167-195 57-85 (105)
343 PF07672 MFS_Mycoplasma: Mycop 22.9 5.3E+02 0.012 22.7 8.0 66 54-119 144-216 (267)
344 COG2119 Predicted membrane pro 22.6 4.4E+02 0.0096 21.7 14.0 32 292-324 144-175 (190)
345 cd02434 Nodulin-21_like_3 Nodu 21.9 2.9E+02 0.0062 23.7 5.9 14 260-273 145-158 (225)
346 PF11947 DUF3464: Protein of u 21.0 4.3E+02 0.0094 21.0 6.2 27 285-312 99-125 (153)
347 COG1966 CstA Carbon starvation 20.9 8.3E+02 0.018 24.2 17.6 39 135-174 48-87 (575)
348 PF02632 BioY: BioY family; I 20.8 2.5E+02 0.0054 22.1 4.9 23 60-82 62-84 (148)
349 COG1288 Predicted membrane pro 20.5 7.6E+02 0.017 23.7 10.6 29 360-389 410-438 (481)
350 PF11298 DUF3099: Protein of u 20.5 1.2E+02 0.0026 20.5 2.6 29 75-103 11-39 (73)
351 COG3462 Predicted membrane pro 20.4 84 0.0018 22.9 1.9 31 163-193 43-73 (117)
352 KOG4830 Predicted sugar transp 20.3 2.1E+02 0.0046 25.2 4.6 57 256-314 27-92 (412)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-38 Score=282.92 Aligned_cols=373 Identities=16% Similarity=0.163 Sum_probs=309.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+..+..+.++.|.....+.+..+.+|++.+ |+++|....|+..|.|.++..+++|+...+.||+.||++++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~--------dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAA--------DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 345667788888888999999999999977 667888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
.+.++.++.+++++++| ++.++++|++.|+ +.|.+++...++..|..|+++|++++++...+..++.++|.++|.+
T Consensus 84 ~l~lFi~~n~l~alAp~---f~~Ll~aR~~~g~-a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 84 LLALFIVSNLLSALAPS---FAVLLLARALAGL-AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 9999999999999 9999999999999999999999999999999999998888766655
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
+|||..|++.+.++++..+..+..+| |++..++ ...+.++.++.+
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-----------------------------~~~~~~~~~~~l 208 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS-----------------------------LPGPLRTLLRLL 208 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-----------------------------CCcchhHHHHHh
Confidence 69999999999999999998899999 2111111 112334444444
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (438)
|+|.++...+..++...+.+..++|+.+++++..|+|+...++.+..++++.++++ .+.|++.|| +.++.+.....+
T Consensus 209 -~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 209 -RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred -cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHH
Confidence 57778888899999999999999999999999999999999999999999999999 899999999 888888888888
Q ss_pred HHHHHHHhHhcccch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 323 ACINMFICSISWSAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 323 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
.++.++.+.+..+.. .... ..+.++......+.......+ .-+|.++.+.+++....++|..+|..++|.++|+.
T Consensus 286 ~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-- 362 (394)
T COG2814 286 LALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-- 362 (394)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 888888777766544 3333 344555555555555555666 33599999999999999999999999999999983
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 013707 401 KGAPFNFPGFSIMCIGLASVRAFTYELLLSFYVF 434 (438)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
.........+++.+.+.......+++++
T Consensus 363 ------g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 363 ------GYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3334445566666666666655554443
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.2e-36 Score=285.12 Aligned_cols=365 Identities=15% Similarity=0.125 Sum_probs=278.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+..+.+..++.........|.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQ--------SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHh--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 344444445444444556667787755 567788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (438)
+..++++.+.++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++|+.+...++|..+||.+++.
T Consensus 83 ~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 83 LFIASHVLSALAWN---FTVLLISRIGIAF-AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999 9999999999999 7788888999999999999999999999999999999999988865
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhccc
Q 013707 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (438)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (438)
++||+.|++.+++.++..+.....+||+++++++ +.++. +...++
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------~~~~~-~~~~~~ 204 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG---------------------------------SLKSL-PLLFRR 204 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc---------------------------------hHHHH-HHHHhC
Confidence 4999999999988776665555556654321100 11221 224456
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
|.++......++..........+.++|+++.+|+++.+.+.+....+++.++++ +..++++||.++|... .+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~-~~~~~~~~ 282 (390)
T PRK03545 205 PALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLL-IAIALLLV 282 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHH-HHHHHHHH
Confidence 666665555555555555567788888888889999999999999999999998 8889999999987654 44444444
Q ss_pred HHHHh-HhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCC
Q 013707 326 NMFIC-SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 403 (438)
Q Consensus 326 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~ 403 (438)
+.... ...++.+..+. ..+.|++.....+...+.+.+..| ++++++.|+++...++|..+||.+.|.++|+.
T Consensus 283 ~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~----- 356 (390)
T PRK03545 283 CLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL----- 356 (390)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 44333 34444444444 566677776667777788888766 78899999999999999999999999999873
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 404 PFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
.....+.+.+++.+++.+...+..+
T Consensus 357 ---g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 357 ---GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred ---ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 2334455555666666655554433
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=269.76 Aligned_cols=369 Identities=14% Similarity=0.115 Sum_probs=295.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh----hhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcc
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVV----PAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK 81 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk 81 (438)
++|....++++.++.+.++..+. -+.|.+.+ +.++|..+.|++.+++.+.+.++..+.|.++||.+.|
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e--------~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr 94 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIE--------DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR 94 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc
Confidence 45556667777777777665543 45555543 5567889999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhH
Q 013707 82 AMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (438)
+.+..++++.++..++++++++ ++.+.+..+++|+ .+|.-.|.+...++.|+|++|||+..++++++.++|..+.|
T Consensus 95 ~fm~~gLilsai~nil~Gfs~s---~~~~~~l~~lng~-fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~ 170 (448)
T COG2271 95 YFMAFGLILSAIVNILFGFSPS---LFLFAVLWVLNGW-FQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAP 170 (448)
T ss_pred eeehHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHH-HhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHH
Confidence 9999999999999999999999 9999999999999 89999999999999999999999999999999999999888
Q ss_pred hhh--HHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCcccccc-CCc
Q 013707 162 LAA--RFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK-IPS 234 (438)
Q Consensus 162 ~l~--~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 234 (438)
++. +++ +||..|++.++++++..++.++..+|+|++..-+. .++.. +++.+.. +++++++ ...
T Consensus 171 ~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-----ie~~~----~d~~e~~-~~~~~~~~ls~ 240 (448)
T COG2271 171 LVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-----IEEYR----GDPLEIY-EEEKENEGLTA 240 (448)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-----HHHhh----cCchhhh-hhhccCCCccH
Confidence 877 553 89999999999999999999999999988655431 00000 0000000 1111111 223
Q ss_pred hhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ch
Q 013707 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GE 312 (438)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~ 312 (438)
++...+...+||.+|.+.+..++....-++++.+.|.|+.|..|+|..+++...+.+-.++++++ ++.|+++||+ ||
T Consensus 241 ~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgr 319 (448)
T COG2271 241 WQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGR 319 (448)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccc
Confidence 44456678899999999999999999999999999999999999999999999999999999999 8999999997 45
Q ss_pred hhH-HHHHHHHHHHHHHHhHhcccc--hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhh-hhhhh
Q 013707 313 AKL-LSLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVS 387 (438)
Q Consensus 313 ~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g 387 (438)
|.. .++.++...++...+...++. +.... .+.+|+......-..-....|..|++..|++.|+...+.++ |.+.+
T Consensus 320 R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a 399 (448)
T COG2271 320 RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALA 399 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhc
Confidence 544 445555666666666666654 22222 34455555555545556679999999999999999999999 88889
Q ss_pred hHhHHHHHHH
Q 013707 388 PLIFSPLTAL 397 (438)
Q Consensus 388 ~~~~g~l~~~ 397 (438)
....|++.|.
T Consensus 400 ~~~~g~i~d~ 409 (448)
T COG2271 400 GLPLGYIADT 409 (448)
T ss_pred CCcceeeEec
Confidence 9888988886
No 4
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.5e-35 Score=279.77 Aligned_cols=349 Identities=15% Similarity=0.138 Sum_probs=273.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
....+...+++.++.....+..|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQ--------EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 344455666777777778888888765 456677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (438)
+..++.+++.++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.++..
T Consensus 89 ~~~~~~~~~~~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 89 LFGLFSLATAQAWD---FPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999998 8999999999999 8888889999999999999999999999999999999999988765
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhccc
Q 013707 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (438)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (438)
.+||..|++.+++.++..+.....+||++++.+++++ + + ++.+..+...+.. ++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~------~--~~~~~~~~~~~~~-~~ 219 (406)
T PRK11551 165 DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA----------------G------K--QRAPVLRALFGEG-RA 219 (406)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc----------------c------h--hhhhhHHHHhhhh-hh
Confidence 3799999998877666655566678887643222100 0 0 0000111111111 11
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
+..+......+...........+.|.|+++ .|+++.+.+.......++.++++ ++.+++.||+++|+.+..+.....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGILA 297 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 222233333344444555667788999987 69999999999999999999998 8889999999999988887777777
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+++.+...++.+.... ..+.+++.....+...++..|.+|+++||++.|+.+....+|..++|.+.|.+.++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 7666666665554444 45667777777888889999999999999999999999999999999999999886
No 5
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.8e-36 Score=279.22 Aligned_cols=349 Identities=15% Similarity=0.153 Sum_probs=283.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHH
Q 013707 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (438)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (438)
.++...++..++.++..+.+|.+..+ .+.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA--------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 45678889999999999999998764 4566788999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhcc-----cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 92 IIPLAILAYRR-----SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 92 ~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
.++..+..+.+ + ++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+....+|.++||.+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 150 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN---IWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL 150 (365)
T ss_pred HHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888888776 7 8999999999999 8899999999999999999999999999999999999999988876
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
.+||+.|++.++..++..+... ..++++++++++++ .+++..++.++..+..
T Consensus 151 l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 206 (365)
T TIGR00900 151 MYATLGIKWAIWVDAVGFAISALLIV-SVRIPELAASEIQA-----------------------LSNAVLRDTREGIKFV 206 (365)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHH-hcccccCCCccccc-----------------------cchhHHHHHHhHHHHH
Confidence 4899999988776555443332 23222111111000 0000001223334456
Q ss_pred cccchhHHHHHHHHHHHhhhchhh-HHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
+++|.++...+..++......... .+.|.|.++.+|.++.+.+.......++..++. +..+++.||.++++.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 285 (365)
T TIGR00900 207 LKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAIF 285 (365)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHHH
Confidence 678888877777777776666665 788999988889999999999999999999988 778899999999998888877
Q ss_pred HHHHHHHHhHhccc-chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 322 AACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 322 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.+++.....+.++ .+.... .++.+++.+...+...++..|.+|+++||++.|+.+...+++..++|.+.|.+.|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 286 VIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777776654 444444 57778888888999999999999999999999999999999999999999999986
No 6
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=8.2e-36 Score=287.14 Aligned_cols=377 Identities=16% Similarity=0.094 Sum_probs=297.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+..+..+++..++..++..++...+|.+.+ |++.+..+.+|+.+.+.++...+.+++|+++||+|||++++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~--------~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSM--------TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 446677888899999999999999999966 456666788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccC-CccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
+..+.+++++++++++| ++.++++|+++|+ +.+...|.....+.+.+ |+++|++++|+......+|..+||.+++
T Consensus 77 ~~~~~~~~~~~~~~a~~---~~~li~~r~l~G~-g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg 152 (495)
T PRK14995 77 GGTLFGLASLAAAFSPT---ASWLIATRALLAI-GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGG 152 (495)
T ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 88888888888887765 6799999999999999999999999998
Q ss_pred Hh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhc---------cccccCCCCCCCC--------
Q 013707 166 FL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE---------TEGVNQNESNSPV-------- 224 (438)
Q Consensus 166 ~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-------- 224 (438)
.+ +||+.|++...+.++..++..+.+||++++++++.|..+..... .++..........
T Consensus 153 ~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 232 (495)
T PRK14995 153 ILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTG 232 (495)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 75 89999999988887777777778888654433333322211000 0000000000000
Q ss_pred -------CccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 013707 225 -------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 297 (438)
Q Consensus 225 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 297 (438)
...+.+.+++..+ .+ ++++|.+....+..++..........+.|.|+++.+|+|+.+.|.......++..+
T Consensus 233 ~~~l~~f~~~e~~~~~p~~~-~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~ 310 (495)
T PRK14995 233 ALLLGLFIRTQLAASRPMID-MR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGF 310 (495)
T ss_pred HHHHHHHHHHHhcCCCCCcC-HH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0001111122222 12 45677777777777777777777888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc---ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHH
Q 013707 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 373 (438)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 373 (438)
+. ++.|++.||+|+|+.+..+..+..++...+... ++.+..+. .++.|++.+...+.......+.+|+++++.+.
T Consensus 311 ~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~ 389 (495)
T PRK14995 311 SG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAG 389 (495)
T ss_pred HH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHH
Confidence 88 888999999999999888888887777665442 23333333 67778999988888888999999999999999
Q ss_pred HHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 374 GCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 374 g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
++.++.+++|+.+|+.+.|.+++..
T Consensus 390 ~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 390 AIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998763
No 7
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=3.6e-35 Score=275.14 Aligned_cols=367 Identities=14% Similarity=0.094 Sum_probs=279.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHH
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (438)
+.++...++...+.+...|.+|.+..+ +.+.+..+.|++.+...++..+.+++.|+++||+|||+++..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVD-------QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 566788889999999999999998753 5577789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh---
Q 013707 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (438)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--- 167 (438)
.+++.+.+.+.++ ++.+++.|+++|+ +.+...|...+++.|++|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGL-GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988 8899999999999 78888889999999999999999999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccch
Q 013707 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (438)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (438)
+||+.|++.+...++..+...+..||.++++.+ ++.++.++...++|.
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 209 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVR--------------------------------TPVREGMTRVLRDKR 209 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccccc--------------------------------hhhHHHHHHHHcCch
Confidence 899999998877666655555555553211000 011112223445565
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
++...+..+...........+.|.|.++.. .++.+.+.+.+..++..........++..||.+.++.+..+..+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIA-GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 554444433333333334567899998864 4778888888887777766664555444456666666777777778877
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCC
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFN 406 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 406 (438)
+.+...++.+.... ..+.+.+.+...|...++..+.+|+++||+++|+.+....+|..+||.+.|.++|+.++.+
T Consensus 289 ~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~---- 364 (400)
T PRK11646 289 FPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALN---- 364 (400)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcC----
Confidence 77776666554443 4566777778888899999999999999999999999999999999999999999854322
Q ss_pred CCchHHHHHHHHHHHHHHH
Q 013707 407 FPGFSIMCIGLASVRAFTY 425 (438)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~ 425 (438)
.....+...+++.++....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 365 QPELPWMMLGIIGLITLLA 383 (400)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 2233444444444444433
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.3e-36 Score=284.36 Aligned_cols=377 Identities=12% Similarity=0.072 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++....+++..+++.++........|.+.+ |++.+..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGK--------DLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHh--------hcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 345566677777788888888888876533 667888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+.++.+++.++++++++ ++.+++.|+++|+ +.+...|...+++.|++|+++|++++++++....+|..+++.++++
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 79 IMVLWGIASTATMFATG---PESLYLLRILVGI-AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 8999999999999 8888889999999999999999999999999999999999988765
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC-CcccchhccccccCCCCCCCCCccccccCCch
Q 013707 167 ----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL-TRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (438)
Q Consensus 167 ----------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (438)
.+||+.|++.+++.++..++.++++||+|++.+...+ .++..++..+....+.++ +. +...+.....
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQ-PE-GAFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccc-cc-cccccccccH
Confidence 3899999999888777666677788998764321000 000000000000000000 00 0000111111
Q ss_pred hHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013707 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (438)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (438)
++.++.++ ++.++...+..++.........+++|.|+++. .|.++.+.+.......++..++. ++.++++||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22233344 35577777777777777888899999999873 46788888988999999999988 88899999998766
Q ss_pred H-HHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 315 L-LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
. .........++..+.....+....+. ..+.+++.....+.......+..|+++|+++.|+.+...++|++++|.+.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 4 33344444444333322222222222 222222332233444455567789999999999999999999999999999
Q ss_pred HHHHHHh
Q 013707 393 PLTALFL 399 (438)
Q Consensus 393 ~l~~~~~ 399 (438)
.+.|..+
T Consensus 391 ~i~~~~g 397 (412)
T TIGR02332 391 ILKDATG 397 (412)
T ss_pred cccccCC
Confidence 9998743
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.7e-35 Score=277.14 Aligned_cols=389 Identities=12% Similarity=0.060 Sum_probs=271.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
....++..+...++.....+.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLA--------DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 334455555666666667778888865 557777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (438)
+.+++.++.+++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+...++|..++|.+++.
T Consensus 97 ~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 97 ATGIINILFGFSSS---LWAFALLWVLNAF-FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8999999999999 7788888999999999999999999999999999999999988776
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH-hhcc
Q 013707 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC-LLRS 244 (438)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 244 (438)
++||+.|++.+++.++..+...+.+||+|++...+.+.++. ++ .++..++. .+...+.++.++ ...+
T Consensus 173 ~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---------~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (434)
T PRK11663 173 HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR---------HD-ALELAQQQ-EGAGLSRKEILTKYVLL 241 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc---------cc-ccccchhc-cccCCChhhhHHHHHhc
Confidence 48999999988876666555566778766433211100000 00 00000000 001112233222 2455
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--chhhHH-HH---
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SL--- 318 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~--- 318 (438)
++.++...+..++.........+++|.|+++.+|+++.+.+...+...++..++. ++.|+++||+ ++|+.. ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~~~~~~~~~ 320 (434)
T PRK11663 242 NPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRGPMNLIFAA 320 (434)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCccHHHHHHHH
Confidence 6777777776666667777788899999988789999999999999999999998 8889999998 333222 22
Q ss_pred HHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 319 GLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.....+...... ..+...... ....+++.............|..|+++||++.|+.+...++|.+++|.+.|++.|+
T Consensus 321 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~ 399 (434)
T PRK11663 321 GILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI 399 (434)
T ss_pred HHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 1121222222111 122222212 22223322222223345668889999999999999999999999999999999997
Q ss_pred HhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 398 FLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
.+ ....+...+++.+++.+..+...|
T Consensus 400 ~g--------~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 400 WH--------WTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred cc--------cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32 222344444555444444444333
No 10
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=8e-35 Score=271.92 Aligned_cols=371 Identities=14% Similarity=0.084 Sum_probs=277.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcch
Q 013707 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (438)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~ 82 (438)
|++|+|+++.++.+.++..++.+...|.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~--------~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA--------QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5678889999999999999999999999999976 44667788999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHh
Q 013707 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (438)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (438)
++..+.++.+++...++++++ ++.+++.|+++|+ +.+...|...+.+.|..++++|+++++..+...++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGI-GCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999 888888888888889999999999999999999999999999
Q ss_pred hhHHhhH---HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 163 l~~~~~w---~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
+++.+.. +...+..+...... +.. .+.+.++++++++ +..+.++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~-- 195 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAI-LPL-LFTRILNQQAENH-----------------------------DSTSIWP-- 195 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHH-HHH-HHhcccCCCCCCC-----------------------------CCCCHHH--
Confidence 9887521 22233322222111 111 1122211110000 0011222
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
..++|.++......+...........++|.|.++ .|.++.+.+...+...+..++++ +..+++.||+++|+.+..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 196 --MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred --HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHH
Confidence 2334555544443444444555667788999987 59999999999998889999988 7789999999999998888
Q ss_pred HHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 320 LFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
.....++..... ..........+.+.+.....|...+.+.|..|+++++...+..+...++|..+||.+.|.+.|+.+
T Consensus 272 ~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g 349 (381)
T PRK03633 272 VFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS 349 (381)
T ss_pred HHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777777665443 222222234555666667788899999999998888888888888899999999999999999742
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 013707 400 SKGAPFNFPGFSIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
....+.+.+.+.++..+..++.+++
T Consensus 350 --------~~~~f~~~~~~~l~~~~~~~~~~~~ 374 (381)
T PRK03633 350 --------DNLLFIMIASVSFIYLLMLLRKAGH 374 (381)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHhccCC
Confidence 2234445555555555444444443
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6.3e-35 Score=273.20 Aligned_cols=353 Identities=11% Similarity=0.034 Sum_probs=263.8
Q ss_pred hhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccc
Q 013707 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (438)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~ 104 (438)
....|.+|.+.+ |++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.++++++
T Consensus 26 ~~~~~~lp~i~~--------~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQLRQ--------ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 556688888855 56778889999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----hHHHHHHHHHHH
Q 013707 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (438)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~~~~ 179 (438)
++.+++.|+++|+ +.+...+...+++.|++| ++|+++++.+..+...|..+|+.+++.+ +||..+.+.++.
T Consensus 97 --~~~ll~~r~l~Gi-g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGV-GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHh-HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 8999999999999 888888889999999997 7899999999988888888777766652 799888766555
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHH
Q 013707 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (438)
Q Consensus 180 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
.++.. ..++...+++++++++ + + . +.++ ..+++..+...+..++..
T Consensus 173 ~~~~~-~~~~~~~~~~~~~~~~-------------------~-----~--~---~~~~----~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 173 AVVAL-FAWWWQSAREVASSHK-------------------T-----T--T---TPVR----VVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred HHHHH-HHHHHHhcCCCccccC-------------------C-----C--c---CCcc----cccCHhHHHHHHHHHHHH
Confidence 44332 2222222211110000 0 0 0 0011 123444555556666666
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHH
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 339 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
..+.....+.|.|+++ +|.++.+.+...+..+++.++++ +..+++.||.++|+....+..+..++...+...++....
T Consensus 219 ~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 7777888999999987 79999999999999999999998 888999999999998888887777776655443332222
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCC-CCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHH
Q 013707 340 YATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLA 418 (438)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 418 (438)
....+.+++.+...|.......+..+ ++++|+..|+.+...+++..++|.+.|++.|..++ ....+.+.+++
T Consensus 297 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~-------~~~~~~~~~~~ 369 (393)
T PRK09705 297 LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN-------YLMDWAFHALC 369 (393)
T ss_pred HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------chHHHHHHHHH
Confidence 22345567777777777666666664 57899999999999999999999999999998543 22334444444
Q ss_pred HHHHHHHHHhhhhhh
Q 013707 419 SVRAFTYELLLSFYV 433 (438)
Q Consensus 419 ~~~~~~~~~~~~~~~ 433 (438)
+++.........+++
T Consensus 370 ~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 370 VVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHhcccc
Confidence 444455444444443
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.4e-35 Score=280.59 Aligned_cols=360 Identities=12% Similarity=0.047 Sum_probs=261.6
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
++..++.+++.....+..|.+.+ |++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 35 ~~~~~~~y~~r~~~~~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 35 FIGYLTMYLIRKNFKAAQNDMIS--------TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHhcChhhhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 34444555566777778887755 5677788999999999999999999999999999999999888888777
Q ss_pred HHHHHHh-----cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 94 PLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 94 ~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
..+..++ +++ ++.+++.|+++|+ +.+...|...++++|++|+++|++++|+.+.+.++|.++++.++.+.
T Consensus 107 ~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 107 CMLGFGASLGSGSVS---LGLMIALWALSGF-FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHhcccch---HHHHHHHHHHHHH-HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 7666554 577 8999999999999 88888899999999999999999999999999999999998876531
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH-HHH
Q 013707 168 ------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD-LIC 240 (438)
Q Consensus 168 ------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 240 (438)
+||..|.+.+++.++..+..++..+++|++.+..++.+ ...+. ..+ ++. +.+ +++.+.++ ..+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~----~~~~~-~~~--~~~--~~~-~~~~~~~~~~~~ 252 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE----IFGEP-ISE--EDK--ETE-STDMTKWQIFVE 252 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh----cccCc-cch--hhh--ccc-cccCcHHHHHHH
Confidence 48888888888777666666666677654332211100 00000 000 000 000 00111122 223
Q ss_pred hhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHH
Q 013707 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (438)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (438)
...++|.++...+..++..........+.|.|+++.+|+|+.+.+.......++..++. ++.|+++||+++|+......
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVACI 331 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHHHH
Confidence 35577888888888888777777888999999999899999999999888889999988 88999999999988766554
Q ss_pred HHHHHHHHH--hHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhh-hhhhhhHhHHHHHH
Q 013707 321 FAACINMFI--CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTA 396 (438)
Q Consensus 321 ~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~ 396 (438)
....++... +...++.+.... .++.|++.............|.+|++++|++.|+.+...++ |.+++|.+.|.+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 332 ALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 443333222 222233333322 33444333222223345667999999999999999999997 77999999999999
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4.1e-34 Score=267.42 Aligned_cols=330 Identities=12% Similarity=0.131 Sum_probs=254.4
Q ss_pred HHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHH
Q 013707 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (438)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~ 99 (438)
.........+.+|.+.+ +++.++.+.|+..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQ--------DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHHHhhHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH
Confidence 33344455667777754 6677888999999999999999999999999999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHH
Q 013707 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQA 175 (438)
Q Consensus 100 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~ 175 (438)
++++ ++.+++.|+++|+ +.+...|...+++.|++|+|+|++++++.....++|..+||.+++. ++||+.|++
T Consensus 104 ~~~~---~~~l~~~r~l~G~-~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~ 179 (394)
T PRK10213 104 FANS---FSLLLIGRACLGL-ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNA 179 (394)
T ss_pred HHCh---HHHHHHHHHHHHH-hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 9998 9999999999999 8888889999999999999999999999999999999999988876 489999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHH
Q 013707 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (438)
Q Consensus 176 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (438)
.+++.++..+......||+++++++ ..++.. ...++|.++...+..
T Consensus 180 ~~~l~~~~~l~~~~~~p~~~~~~~~---------------------------------~~~~~~-~~l~~~~~~~~~~~~ 225 (394)
T PRK10213 180 AAVMGVLCIFWIIKSLPSLPGEPSH---------------------------------QKQNTF-RLLQRPGVMAGMIAI 225 (394)
T ss_pred HHHHHHHHHHHHHHHCCCCCccccc---------------------------------chhHHH-HHhcCHHHHHHHHHH
Confidence 8877665544444456664321100 001111 234566676665555
Q ss_pred HHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhccc
Q 013707 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS 335 (438)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (438)
++..........+.++++.+++|+++.+.+......+++.+++. ++.+++.||.+++.............+++....++
T Consensus 226 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~ 304 (394)
T PRK10213 226 FMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSD 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhh
Confidence 55555555556666444445579999999999999999999998 88899999965443344333334444444444455
Q ss_pred chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 336 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+.... ..+.|++.+...+...+.+++..| +++++..+......++|..+||.++|.++|.
T Consensus 305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 305 KIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 554444 567788888888999989998887 6677888888888999999999999999996
No 14
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.8e-34 Score=269.78 Aligned_cols=347 Identities=12% Similarity=0.123 Sum_probs=260.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|+++.++++.++..++..+.....+...+ +.+.+..+.+++.+.+.+++.+++++.|+++||+|||++++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLK--------ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 35667888899999887777776666655 3344557789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.++.+++.+.+.++++ . ++.|+++|+ +.+...|+..+++.|++|+|+|++++++.+....+|.++||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~-~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGI-GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888777766 3 678999999 89999999999999999999999999999999999999999999875
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcc
Q 013707 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (438)
Q Consensus 168 ---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (438)
.|+..+.+.+...++. .+..+.+||++++++++++ +..+...+.++..+.+++
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~ 203 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSW-----------------------NPIALLRDFFHACRVLWR 203 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCC-----------------------CHHHHHHHHHHHHHHHHh
Confidence 4555666555443333 3344667776533221100 000000112222344566
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++.......+............|.|+++.+|.++.+.|.+....+++.++++ +..+++.||.++++.+..+.. .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~-~~ 281 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGIL-MG 281 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHH-HH
Confidence 6766655555444455555666777889998899999999999999999999998 788899999888887777653 34
Q ss_pred HHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc-chhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
+....+.+.++.+.... ..+.|++.+...+..++..++..|+|. +|++.++.+..++++..++..+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 282 LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44444444444443333 457788888888888888888766554 799999999999999999999998664
No 15
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.4e-35 Score=275.86 Aligned_cols=358 Identities=17% Similarity=0.148 Sum_probs=266.1
Q ss_pred HHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHH
Q 013707 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (438)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~ 98 (438)
+..++.....+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++..++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQE--------DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHHHHhhhHhHHHHHH--------hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 445565666677777644 556777889999999999999999999999999999999999999999999999
Q ss_pred HhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHH
Q 013707 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQ 174 (438)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~ 174 (438)
+++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++.+++.+...++|..+||.+++. .+||+.|+
T Consensus 77 ~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 152 (399)
T TIGR00893 77 AFAGA---YVSLYILRVLLGA-AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFI 152 (399)
T ss_pred HHHcC---HHHHHHHHHHHHH-HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHH
Confidence 99998 9999999999999 8888999999999999999999999999999999999999988876 38999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHH
Q 013707 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 254 (438)
Q Consensus 175 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (438)
+.+++.++..+...+..||++++++..++.++.. ..+ ... ++.+.+++..+.... .+...++|.++...+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 223 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI---VVG-GLL-AEQQGKGPSTPKKYQ----IKELLKDRRVWGLALG 223 (399)
T ss_pred HHHHHHHHHHHHhhheecCCCCccccCCHHHHhh---cch-hhc-cccccccccCCCccc----hHHHhcCHHHHHHHHH
Confidence 9888877766666666777654332211100000 000 000 000000011111112 2234567778888888
Q ss_pred HHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh--HHHH------HHHHHHHH
Q 013707 255 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSL------GLFAACIN 326 (438)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~------~~~~~~~~ 326 (438)
.++..........+.|.|+++.+|.++.+.+.+.....++.+++. ++.+++.||+++|+ .... +.....+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 888888888889999999999899999999999999999999988 88899999999885 1111 11111111
Q ss_pred HHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 327 MFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.......++.+........+.......+...++.+|..|+++||++.|+.+...++|..++|.+.|.+.|..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 303 MFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 111111122222222333333333368889999999999999999999999999999999999999998863
No 16
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=8.6e-34 Score=272.97 Aligned_cols=369 Identities=15% Similarity=0.102 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHH-HHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF-QQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~-~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
++......++.+++.++..++....|.+.+++. ++.++. .+ ....+ +.++..++..+++++.|+++||+|||+++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~~-~~-~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 91 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADPS-VQ-MIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCcH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 445566678889999999998888887766542 222221 11 11122 357888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchhH-----HHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh
Q 013707 86 LPLTLSIIPLAILAYRRSISFF-----YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (438)
.+.++++++++++++++++..+ ..+++.|+++|+ +.|...+...+++.|++|+++|++..++.+.+..+|..+|
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999993211 148999999999 8899999999999999999999999999998888888777
Q ss_pred HhhhH------------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccc
Q 013707 161 TLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPV 228 (438)
Q Consensus 161 ~~l~~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (438)
+.+.. .+|||++|++.+++.++ .++....+||+|+..+++++.++ . . ++. . .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~-------~--~--~~~-~---~ 234 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQ-------G--D--REG-L---Q 234 (490)
T ss_pred HHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhh-------h--c--ccc-c---c
Confidence 65432 24899999998766554 34445678887653221100000 0 0 000 0 0
Q ss_pred cccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013707 229 CKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP 308 (438)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (438)
+++..++++.++. +++.+.......++....++....++|.|+++.+|++..+.+.......++..++. +..++++|
T Consensus 235 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d 311 (490)
T PRK10642 235 DGPKVSFKEIATK--HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLSD 311 (490)
T ss_pred ccccCCHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0111234443221 11222222233344556677788899999988889998887777777777777877 78899999
Q ss_pred hhchhhHHHHHHHHHHHHH-HHhHh--cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhh
Q 013707 309 ILGEAKLLSLGLFAACINM-FICSI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 384 (438)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 384 (438)
|+|||+.+..+.+...++. ..+.. ..+....+. ..+.+++.+........+..+.+|++.||++.|.......+++
T Consensus 312 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 312 RFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 9999998877765433322 21222 222333333 3445565566666677788899999999999998666677778
Q ss_pred hhhhHhHHHHHHHH
Q 013707 385 IVSPLIFSPLTALF 398 (438)
Q Consensus 385 ~~g~~~~g~l~~~~ 398 (438)
.++|.+.+++.+..
T Consensus 392 ~~~p~i~g~l~~~~ 405 (490)
T PRK10642 392 GLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999998753
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.4e-34 Score=283.38 Aligned_cols=394 Identities=15% Similarity=0.139 Sum_probs=282.0
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (438)
+.++.+...+....+.+++|.+.. +++++..+.+++.+++.++.+++++++|+++||+|||+.++++.++.+
T Consensus 172 ~~l~~~~~g~d~~~is~ilp~i~~--------~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~ 243 (742)
T TIGR01299 172 LGLALMADGVEVFVVGFVLPSAEK--------DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNG 243 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334444555556667778887755 456667788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH------
Q 013707 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------ 166 (438)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~------ 166 (438)
++.++++++++ ++.++++|++.|+ +.+...|...+++.|++|+++|++.+++++....+|.++++.++..
T Consensus 244 i~~ll~afa~s---~~~llv~R~l~G~-g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 244 FFAFFSSFVQG---YGFFLFCRLLSGF-GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999 9999999999999 8888889999999999999999999999999999999998876533
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CCCcccchhccccccCC--------------
Q 013707 167 -----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD---DLTRPIITEETEGVNQN-------------- 218 (438)
Q Consensus 167 -----------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-------------- 218 (438)
.+||+.+++.++..++. ++..+++||+|+....+ +++.+..++..+.+...
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 25899998887765444 55667899998753222 22222222211111000
Q ss_pred ----CC---CCCCCccc-c-----ccCC---chhHHHHhhcccc---hhHHHHHHHHHHHhhhchhhHHHHHHHHhH---
Q 013707 219 ----ES---NSPVKIPV-C-----KKIP---SIRDLICLLRSSV---TLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--- 276 (438)
Q Consensus 219 ----~~---~~~~~~~~-~-----~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 276 (438)
.+ +.+..... . +... .....++.+++++ ..+.+.+..++..+.+++...++|..+++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000000 0 0000 0000122233332 334555666777788889999999875441
Q ss_pred -c-------------------------------------CC-----C---------------------------------
Q 013707 277 -F-------------------------------------HF-----N--------------------------------- 280 (438)
Q Consensus 277 -~-------------------------------------g~-----~--------------------------------- 280 (438)
+ |+ +
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00 0
Q ss_pred -----------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 281 -----------------------------------KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 281 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
...........+++.+++. ++.++++||+|||+++..+.++.++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~lsai 637 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVLSCI 637 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 0011233445567777777 8889999999999999999999999
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCC
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 404 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 404 (438)
+.+++++.++....++ .++.+++.+...+...++++|.+|++.|++++|+.+....+|.+++|.+++.+.+.
T Consensus 638 ~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------- 710 (742)
T TIGR01299 638 SCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------- 710 (742)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 9888887766554444 45667777778888999999999999999999999999999999999999988875
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Q 013707 405 FNFPGFSIMCIGLASVRAFTYELLL 429 (438)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (438)
....++.+.+++.+++.++..++
T Consensus 711 --~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 711 --TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhC
Confidence 23345666666666666655555
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=3.6e-34 Score=269.57 Aligned_cols=373 Identities=12% Similarity=0.104 Sum_probs=274.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHh
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (438)
++++.+..+.+..++..++.++..|.+|.+.++ +++.+..+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-------~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHD-------QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 456788889999999999999999999988654 5567778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc---ccc--hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhh
Q 013707 85 TLPLTLSIIPLAILAYR---RSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~~---~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (438)
..+.++.+++.+.+.++ ++. ..++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+....+|.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGI-GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHh-hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 99999888776665543 221 126789999999999 888888899999999999999999999999999999999
Q ss_pred hHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCch
Q 013707 160 GTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (438)
Q Consensus 160 g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (438)
||.+++. ++|+..+++..++.++..+ . .++.++++.++ + ++.+.
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~-------------------------~---~~~~~ 211 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLL-L---ARPRPAVPPVK-------------------------G---ERLPF 211 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHH-H---HhcCCCCCCCC-------------------------c---cchhH
Confidence 8888776 4899888876655433221 1 22211111000 0 00112
Q ss_pred hHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q 013707 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (438)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (438)
++..+. .+.......+..+.+.....+.|.|.++ .|++ +.+.......++.+++. +..+++.||+++|+.
T Consensus 212 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 212 RRVLGR------VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHH
Confidence 221111 1111222233344455566778888876 4663 34556667777888887 788899999999999
Q ss_pred HHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHH
Q 013707 316 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 394 (438)
+..+..+..++.......++.+.... ..+.|++.+...+.......+..|+++||++.|+++....+|..++|.+.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 361 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV 361 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888877777666555444 56778888888888888888899999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 013707 395 TALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFYVFS 435 (438)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
.+..+ ....+.+.+++.+++.+.....+++..+
T Consensus 362 ~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 362 ASWFG--------YPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHcC--------HHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 88632 2234445555556666555555554433
No 19
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.2e-33 Score=267.21 Aligned_cols=378 Identities=16% Similarity=0.175 Sum_probs=284.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHh
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (438)
+|+|....++++.++..++.++..|.+|.+.++. +.++.+....+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL---GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 4677888888999999999999999999998764 2222222234569999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
..+.+..+++.+++.+.++ ++.+++.|++.|+ +.+ ..+...+++.|..|+++|++++++......+|..++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN---IWQFLILRALLGL-LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888888 8999999999999 655 4577888999999999999999999999999999999888
Q ss_pred HH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH
Q 013707 165 RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (438)
Q Consensus 165 ~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (438)
+. .+||+.|++.+++.++..+...+.+||++++.+++ +..+.++..+
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 213 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-----------------------------EMLHMREVVT 213 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-----------------------------hhhHHHHHHH
Confidence 76 48999999998887776666666777754322111 0001223333
Q ss_pred hhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChh---HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH
Q 013707 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (438)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (438)
.+++++..+......+...........+++.|..+..+.... ..+.+....+++..++. +..+++.||+++|+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 214 SLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILI 292 (408)
T ss_pred hCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHH
Confidence 343333333333334444445555667788888775332221 23455556667777777 77789999999999998
Q ss_pred HHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 318 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+.....++.+...+.++.+.... ..+.+++.+...|...+...+..|++++|+.++..+....+|..+||.+.|.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 888887777776666666555544 5677888888899999999999999999999999999999999999999999988
Q ss_pred HHhcCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 013707 397 LFLSKGAPFNFPGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (438)
.. .....+...+++.+++.+..++
T Consensus 373 ~~--------g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 373 NY--------GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hc--------chhHHHHHHHHHHHHHHHHHHH
Confidence 63 2233455555555555555544
No 20
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1e-33 Score=268.60 Aligned_cols=388 Identities=13% Similarity=0.102 Sum_probs=262.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
++|.....+++.+++.++........|.+..+...++.++. ..........++..+++.+++++.|+++||+|||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 34556666778888999988888777766554322222221 11111122335566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchhHH--------HHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhh
Q 013707 86 LPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (438)
.+.+++++++++++++++ +. .+++.|+++|+ +.+...+....++.|++|+++|++..+..+.+..+|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 99 LTVWMMGIATALIGLLPS---FSTIGWWAPVLLVTLRAIQGF-AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHh-hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999 54 58899999999 8899889999999999999999999999999999998
Q ss_pred hhhHhhhH------------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCC
Q 013707 158 VCGTLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (438)
Q Consensus 158 ~~g~~l~~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (438)
++++.+.. .++||.+|++.+++.++. +......||+++..+++++ .+ +
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~-------------~~--~---- 234 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHE-------------QA--A---- 234 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhh-------------cc--c----
Confidence 88865443 258999999887765432 3333445665432111100 00 0
Q ss_pred ccccccCCchhHHHHhhcccchhHHH-HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 013707 226 IPVCKKIPSIRDLICLLRSSVTLSQA-AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP 304 (438)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (438)
. +++.+.. +.++++|..+.. ....++..+..+....+.|.|.++.+|+++..........+....++. ++.|
T Consensus 235 -~--~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g 307 (438)
T PRK09952 235 -A--KKRIPVI---EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFA 307 (438)
T ss_pred -c--cccCCHH---HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0 0000111 113334444433 334445555666778899999988889988766555555666667776 7889
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHhHh---ccc-chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhH
Q 013707 305 LLAPILGEAKLLSLGLFAACINMFICSI---SWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 379 (438)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 379 (438)
+++||++||+.+..+.++..++...+.. ..+ .+.... ..+.+++.+...+..+++..|.+|++.|+++.|+.+..
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~ 387 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQV 387 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHH
Confidence 9999999999888776665554433222 122 222222 34446667777788889999999999999999986655
Q ss_pred h-hhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 380 S-SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 380 ~-~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
. .+++.++|.+.+++.+...+. + ...+...+++.+++.+..+..++
T Consensus 388 ~~~lgg~~~p~i~g~l~~~~~~~-----~-~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 388 ASVVGGGFTPFIAAALVTYFGGS-----W-HSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-----c-hHHHHHHHHHHHHHHHHHHHccc
Confidence 4 589999999999998863211 1 12333444455555555554443
No 21
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.2e-34 Score=272.38 Aligned_cols=350 Identities=14% Similarity=0.121 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|.+..++...++..++.++..+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQIQMM--------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 35566677788899999999999999997743 4456788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhH
Q 013707 87 PLTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 87 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (438)
+..+.+++....+. .++ ++.+++.|+++|+ +.+...+...+++.|+.|+++|+++.++.+...++|..+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 88877776655442 345 7888999999999 77888888899999999999999999999999999999999
Q ss_pred hhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH
Q 013707 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (438)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (438)
.+++.+ +|++.|++.++..++.. +..+.+||++++++++ ++..++.++
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~---------------------------~~~~~~~~~ 215 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITL-LPLLRLPALPPPPQPR---------------------------EHPLRSLLA 215 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHhCCCCCCCCccc---------------------------ccchHHHHH
Confidence 988763 79999998877765543 3445667654322110 000112233
Q ss_pred HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH
Q 013707 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (438)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (438)
..+..+++|.++...+..++... ......++|.|.++.+|.++.+.+.+.+...++.+++. ++.+++.||.++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLML 293 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHH
Confidence 34445667766655555444333 34567788999998889999999999999999999988 78889999877777888
Q ss_pred HHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 318 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+..+..++.+.+.+.++.+.... ..+.+++.+...+...+++++..|++.||+++|+++...++|..+||.+.|.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 888888887777766665544333 5666777777778888899999999999999999999999999999999999999
Q ss_pred HH
Q 013707 397 LF 398 (438)
Q Consensus 397 ~~ 398 (438)
..
T Consensus 374 ~~ 375 (417)
T PRK10489 374 MM 375 (417)
T ss_pred Hh
Confidence 74
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=9.5e-34 Score=264.64 Aligned_cols=342 Identities=13% Similarity=0.164 Sum_probs=262.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
+.++.+.+..+....+.....|.+|.+.+ |++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 74 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH--------DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFL 74 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH--------HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 45667788888888888999999999865 5566778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH-
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (438)
..+.+++.++++++++ ++.+++.|+++|+ +.+...+....++.|+.|+++|+++++....+..+|..+||.+++.
T Consensus 75 ~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 75 VALCVIGNAMFTLSSS---YLMLAIGRLVSGF-PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 9999999999999999 9999999999999 8888888888999999999999999999999999999999888766
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhc
Q 013707 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (438)
Q Consensus 167 ---~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (438)
.+||+.|++.+++.++..+...+.+||.+++++. +.++..+.+
T Consensus 151 ~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------------~~~~~~~~~- 196 (382)
T PRK10091 151 SQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---------------------------------GLREQFHFL- 196 (382)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---------------------------------CHHHHHHHh-
Confidence 3899999999888776666556667775321110 001112223
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
+++..+......++..........+.++|+++.+|+++.+.+.+.+..+++.++++ ++.+++.||+++++.+..+..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 197 RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHHH
Confidence 34444444444444434444455677888888789999999999999999999999 88899999999999988888888
Q ss_pred HHHHHHhHh-cccchHHHH-HHHHHhhhhhhHHHHH-HHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 324 CINMFICSI-SWSAWVPYA-TTAFSVLVVFATPSFR-SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 324 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
+++.+.+.. .++.+.... ..+.+.+.....+... ....+..|++.++.+. .+....+|.++||.+.|.++|..
T Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 276 VLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcc
Confidence 877765544 333333332 3344444443344333 3444444555555543 46778999999999999999963
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=3.5e-34 Score=263.94 Aligned_cols=330 Identities=13% Similarity=0.042 Sum_probs=247.3
Q ss_pred HHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHH
Q 013707 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (438)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~ 98 (438)
.+......+.|.+|.+.+ |++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+....
T Consensus 2 ~~~~~~~~~~~~lp~i~~--------~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAE--------DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred hhhHHHHHHHhhHHHHHH--------HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 345667788899999966 567778899999999999999999999999999999998776655554443323
Q ss_pred HhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHH
Q 013707 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQ 174 (438)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~ 174 (438)
...++ ++.+++.|+++|+ +.+.. +.....++|++|+|+|++++++.+.+..+|.++++.++..+ +||+.|+
T Consensus 74 ~~~~~---~~~l~~~R~l~G~-g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~ 148 (368)
T TIGR00903 74 LDPFN---YEWLLACQLLAAL-GQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLII 148 (368)
T ss_pred HHhcc---HHHHHHHHHHHHh-HhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 33367 8999999999999 77764 56667779999999999999999999999999998888774 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHH
Q 013707 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 254 (438)
Q Consensus 175 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (438)
+.++++++..++.++.+||+|++++++ . +. . +..++ ++.+.++|.++...+.
T Consensus 149 ~~~~l~~~~~~~~~~~lp~~p~~~~~~---------------~--------~~-~---~~~~~-~~~ll~~~~~~~~~~~ 200 (368)
T TIGR00903 149 PIAAVAAAGIILVLAALPALPFQAAEG---------------F--------GF-K---DAVKE-FGALAGRKDLWIIGAI 200 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC---------------c--------ch-H---HHHHH-HHHHHcChhHHHHHHH
Confidence 988888777777778899976543211 0 00 0 01112 2335567888999889
Q ss_pred HHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch---hhH-HHHHHHHHHHHHHHh
Q 013707 255 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---AKL-LSLGLFAACINMFIC 330 (438)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~~~ 330 (438)
.++....++...+++|.|+++ .|++.. .+.......+.+.++. ++++||.+| |+. ......+.++.....
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999977 688865 5665555555555544 566666543 333 322344444444444
Q ss_pred HhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 331 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
....+.+.... ..+.+++.....+..+++.+|.+|++.||++.|+.+...++++..+|.+.+.+.
T Consensus 275 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 275 AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 54444433333 444556666677778899999999999999999999999999999999998877
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.2e-34 Score=273.69 Aligned_cols=373 Identities=14% Similarity=0.148 Sum_probs=272.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
.+.+...++..+.+.++..+..+..|.+.+ +++.+..+.|++.+.+.++..+++++.|.++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAG--------EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 345667788888999999999999998865 556777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+.++.+++.+++.++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|.++++.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPG---YITMFIARLVIGI-GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHh-hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999999988776
Q ss_pred h----h--HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH
Q 013707 167 L----S--TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (438)
Q Consensus 167 ~----~--w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (438)
+ + ||+.|++.++..++. +.....+||+++.++++++.++..+..++... ++ +..+.. .++......+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~--~~~~~~~~~~ 231 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALVRTMVDILYG-GE---HRIANI--VMTLAAAMVQ 231 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc-cc---hhhhhh--hhhhhHHhhh
Confidence 3 4 999998876554433 34445677765432211110000000000000 00 000000 0000001011
Q ss_pred hhcc-cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 241 LLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
...+ .+.+........+..........++|.|+++.+|+++.+.+.+.....++.+++. ++.+++.||+++|+.+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 232 SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVCS 310 (405)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHHH
Confidence 1111 1112222333333344445666788999988899999999999999999999988 8889999999999988877
Q ss_pred HHHHHHHHH-HhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 320 LFAACINMF-ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 320 ~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.....+... .....++.+.... ..+.++......+....+++|.+|+++||++.|+.+...+++..++|.+.|.+.|+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 311 LLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 766533332 2233334333333 35556666666777788899999999999999999999999999999999999998
Q ss_pred Hh
Q 013707 398 FL 399 (438)
Q Consensus 398 ~~ 399 (438)
.+
T Consensus 391 ~g 392 (405)
T TIGR00891 391 LD 392 (405)
T ss_pred cc
Confidence 54
No 25
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.6e-33 Score=264.27 Aligned_cols=347 Identities=12% Similarity=0.089 Sum_probs=269.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHh
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (438)
|++|..+..++..++.........+.+|.+.+ +++.+..+.|++.+.+.++..+++++.|++.||+|||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAE--------YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 44556666677777777777788888888865 5567778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
..+.++.+++.++++++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++++..+....+|..++|.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~---~~~~~~~~~l~G~-~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHS---LALFSIAMFVLGV-VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHcch---HHHHHHHHHHHHH-hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 8999999999999 88888888999999999999999999998888888888888776
Q ss_pred HH-----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 165 RF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 165 ~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
+. .+||+.|.+.+++.++..++.++ ++.|+.+++++ + ++ ++ ..++
T Consensus 152 ~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~--------------~--~~----~~------~~~~-- 201 (394)
T PRK03699 152 AYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP--------------K--AD----KP------VAKE-- 201 (394)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc--------------c--cc----Cc------cccc--
Confidence 54 48999999888776555433322 22222111100 0 00 00 0000
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
. .++.++...+..++..........+.|.|+++.+|+|+.+.+.+.+...++..++. ++.++++||+++|+.+...
T Consensus 202 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 202 --K-WGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred --c-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHH
Confidence 0 12345555556666666677788999999998899999999999999999999988 8889999999999988877
Q ss_pred HHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 320 LFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
..+..+...++...++.+.... .++.|++.+...+...+...+..| +++++..|......++|..++|.+.|++.|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~ 356 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF 356 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 7777776666655555544333 566777777777887878777766 55678889999999999999999999999974
No 26
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=9.6e-34 Score=264.76 Aligned_cols=362 Identities=14% Similarity=0.101 Sum_probs=270.3
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH-HHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI 92 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~-~~~~~~ 92 (438)
.+..++..++.++..|.+|.+.++ +++.+..+.|++.+.+.+...+.+++.|+++||+||||.++. +.....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSE-------EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHc-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 455778889999999999998653 567778899999999999999999999999999999887654 556666
Q ss_pred HHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHH--HHHHHHHHHhhhhhhHhhhHH----
Q 013707 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASA--FGILLGVLSASFVCGTLAARF---- 166 (438)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~---- 166 (438)
++.++++++++ ++.+++.|++.|. ..+...|...++..|+.|+++|++. .+......++|..+||.+++.
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77788888888 8888899999988 6677788889999999887777654 577888888999999888775
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccc
Q 013707 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (438)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (438)
++||+.|++.++..++..+..++.+||+++++++++ ...+.++ ..++|
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~----~~~~~ 199 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL----------------------------TRLEVRG----LLASR 199 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc----------------------------Ccchhhh----hhcCc
Confidence 489999999988877776666677888654322110 0001111 23345
Q ss_pred hhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013707 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (438)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (438)
.++......++............|.|+++.+|.++.+.+.+.........++. +..+++.||+++|+.+..+.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 45544444444444445556778999988899999999988877766667766 78899999999999888777766666
Q ss_pred HHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCC
Q 013707 327 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (438)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~ 405 (438)
.......++.+.... ..+.+++.+...+....+.+|..| ++++++.|+.+...++|..++|.+.|.+.|..+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g------ 351 (375)
T TIGR00899 279 YTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWS------ 351 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 555555555554444 456677777778888888888887 466799999999999999999999999988632
Q ss_pred CCCchHHHHHHHHHHHHHHHHHh
Q 013707 406 NFPGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~ 428 (438)
....+...+++.+++.....+
T Consensus 352 --~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 352 --YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred --chhHHHHHHHHHHHHHHHHhe
Confidence 223344455555555554443
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.1e-33 Score=264.82 Aligned_cols=342 Identities=13% Similarity=0.087 Sum_probs=267.6
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
.+..++..++..+..|.+|.+.+ +++.+..+.++..+.+.++..+++++.|+++||+|||+++..+....++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 19 VLFEFATYIANDMIQPGMLAVVE--------DFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHhhhhhHhcchHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34445556678888999998865 4566678889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhH
Q 013707 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 169 (438)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w 169 (438)
+.+...++++ ++.+++.|+++|+ +.+...+...+++.|.+|+++|.+.++.......+|..+||.+++. .+|
T Consensus 91 ~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 91 TCLAILLAQS---IEQFTLLRFLQGI-GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHcc---HHHHHHHHHHHHh-HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9999999998 8899999999999 7788888899999999999999999999988888888889888766 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhH
Q 013707 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (438)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (438)
|+.|++.+++.++..+...+..||++++++++ . +..+..+..+..+++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~---~~~~~~~~~~~~~~~~~~~ 218 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEK-------------------------L---SLKELGRDYKLVLKNRRFV 218 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-------------------------c---cHHHHHHHHHHHHcCcHHH
Confidence 99999988887776665556667654321110 0 0011222234456677777
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 013707 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (438)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (438)
...+..++............|.|+++.+|+++.+.+.......++..++. ++.+++.||+++|+.+..+.+...++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 219 AGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 76666666655555666778989888889999999988777777777877 88899999999999988888877777766
Q ss_pred hHhcc-----cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 330 CSISW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 330 ~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.... +.+.... ..+.+++.+...+..+..... .+++++|++.+..+..+.++..+|+.+.+.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 298 AALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred HHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 65432 2222233 566777777777776666544 4558999999999999999999999999998775
No 28
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4.6e-34 Score=276.13 Aligned_cols=374 Identities=11% Similarity=0.104 Sum_probs=292.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
....++++.++..++..+..+.+|.+.+ +++.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAG--------DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 3456677888899999999999999976 44566678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
++..++.++++++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++++
T Consensus 75 ~~~~~~~~~~~~~~~---~~~l~~~~~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 75 FAFTLGSLLCGVAPN---LELMIIFRVIQGF-GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHh-hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 999999999999999 9999999999999 88888899999999999999999999999999999999999988874
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchh----------ccccccCCCCCCCCC---------
Q 013707 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITE----------ETEGVNQNESNSPVK--------- 225 (438)
Q Consensus 168 ---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--------- 225 (438)
+||+.|++.+++.++..+...+..||++++++++.|..+.... ..+...++..+....
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 8999999998887777666667777755433222221111000 000000000000000
Q ss_pred ------ccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHH
Q 013707 226 ------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (438)
Q Consensus 226 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (438)
..+.+.+++..+ . ..+++|.++...+..++..+.......++|.|+++.+|+++.+.+.......++..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVD-L-RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHcCCCCccC-H-HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000011111111 1 24456777777777777778888888899999999999999999999999999999988
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc--c--cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHH
Q 013707 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--W--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (438)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (438)
++.+++.||+++|+.+..+..+.+++...+.+. + +.+.... ..+.+++.+...+.......+..|++++|++.|
T Consensus 309 -~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 309 -PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred -HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 888999999999999999988888888776632 2 2223333 567788888888777788888899999999999
Q ss_pred HHhhHhhhhhhhhhHhHHHHHHH
Q 013707 375 CISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 375 ~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.+..+.+|+.+|+.+.|.++++
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 29
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.6e-33 Score=263.04 Aligned_cols=351 Identities=11% Similarity=0.020 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+....++.+++.++...+....|.+.++....+.+ ..+..+.+.+.+...++..++++++|+++||+|||+++..+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNT--TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33445667888899888777777776654211111 1222344555566677777999999999999999999999999
Q ss_pred HHHHHHHHHHhcccch-----hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 90 LSIIPLAILAYRRSIS-----FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
+++++++++++++++. ....+++.|+++|+ +.|...|...+++.|++|+++|++..+..+.....|.++++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGL-SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHh-hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999832 12468999999999 88999999999999999999999999998888888877776543
Q ss_pred H------------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccC
Q 013707 165 R------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (438)
Q Consensus 165 ~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (438)
. ..|||.+|++.+++.++. ++....+||+++.++++ . ++.
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~-------------------------~--~~~ 232 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQETRA-------------------------L--KEA 232 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHHHhh-------------------------h--ccc
Confidence 2 258999999888776544 33334456544321100 0 001
Q ss_pred CchhHHHHhhcccchhHHHHHHHHH-HHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013707 233 PSIRDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (438)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (438)
.++++ +++++..+...+..++ .....+...+++|.|+++.+|++..+.+...+...+...+++ .+.|+++||++
T Consensus 233 ~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~Dr~g 307 (432)
T PRK10406 233 GSLKG----LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQ-PLIGALSDKIG 307 (432)
T ss_pred ccHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 13344 3345555544443333 355667788899999988889999898888888888888887 67789999999
Q ss_pred hhhHHHHHHHHHHHHHHHhH--h--cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhh-hhh
Q 013707 312 EAKLLSLGLFAACINMFICS--I--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANI 385 (438)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ 385 (438)
||+.+..+..+..+....+. . .++...... ..+.....+...+....+.+|.+|++.|+++.|+.+...+. .+.
T Consensus 308 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 308 RRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 99887766554433322111 1 112222222 22222333344456677889999999999999999887664 344
Q ss_pred hhhHhHHHHHHH
Q 013707 386 VSPLIFSPLTAL 397 (438)
Q Consensus 386 ~g~~~~g~l~~~ 397 (438)
..|.+.+. .+.
T Consensus 388 ~~p~~~~~-l~~ 398 (432)
T PRK10406 388 SAEYVALS-LKS 398 (432)
T ss_pred HHHHHHHH-HHH
Confidence 57777774 454
No 30
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=264.08 Aligned_cols=365 Identities=15% Similarity=0.126 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
+++.+..+.+..++..++.++..|.+|.+..+ |++.+..+.|++.+++.++..+++++.|+++||+||||++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-------~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH-------DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL 85 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHH-------hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH
Confidence 46677778888899999999999999988653 55777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hccc--chhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh
Q 013707 86 LPLTLSIIPLAILA---YRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 86 ~~~~~~~~~~~~~~---~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (438)
.+.+...++.+... ..++ ...++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+.+...|..+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g 164 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGF-GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG 164 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence 98887766554332 2211 1127889999999999 8888888889999999999999999999999999999999
Q ss_pred HhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchh
Q 013707 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (438)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (438)
|.+++. ++|+..+.+..+..++.. ...++.+++++++ + ++++.+
T Consensus 165 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------------------------~---~~~~~~ 212 (392)
T PRK12382 165 APLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTVRKVPAHA-------------------------G---ERPSLW 212 (392)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhccCCCCCc-------------------------c---cCchHH
Confidence 988876 488887766544432221 1222222111100 0 001122
Q ss_pred HHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
+..+.++++ .+..++..........+.|.|+++ .++++ .+......+++.++++ +..+++.||+++|+.+
T Consensus 213 ~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 213 SVVGLIWKP------GLGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGGVKVA 282 (392)
T ss_pred HHHHHHHHh------HHHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCCCeeh
Confidence 222222211 112223334455566777888876 46654 3555566677777777 7888999999999998
Q ss_pred HHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 317 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
..+..+..++.+.+.+.++.+.... ..+.+++.+...+...+...+..|+++||++.|+.+....+|..++|.+.|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 283 IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888877777666554444 566778888888888888899999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 013707 396 ALFLSKGAPFNFPGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (438)
|+.+ ....+.+.+++.+++....+.
T Consensus 363 ~~~g--------~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 363 TSFG--------YPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHhC--------chHHHHHHHHHHHHHHHHHHh
Confidence 9742 223444455555555554443
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=8.9e-33 Score=263.54 Aligned_cols=339 Identities=13% Similarity=0.073 Sum_probs=241.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHhhhhcchhhH
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 125 (438)
+.+..+.|++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+.+++++.. ..++.+++.|++.|+ +.+..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi-~~g~~ 137 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW-FQGMG 137 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH-HHhcc
Confidence 7777889999999999999999999999999999999999999999999888876411 117788999999999 77887
Q ss_pred hhhhhHhhhccCCccchhHHHHHHHHHHHhhh-hhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 013707 126 NCLALAYVADNISERQRASAFGILLGVLSASF-VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (438)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 200 (438)
.+.....+.|++|+++|++++++.+.+.++|. +.+|+++.. .+||+.|++.+++.++..++..+++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL 217 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC
Confidence 78788889999999999999999999998886 445654322 3899999999888777667777788887654321
Q ss_pred CCCCcccchhccccccCCCCCCCCCccccccCCchhHH-HHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCC
Q 013707 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (438)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (438)
+++.+ . +++.. ++.+. ++ ++..+.++. .+..++++.++...+..++.....+....++|.|+++..|+
T Consensus 218 ~~~~~-~----~~~~~--~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~ 286 (452)
T PRK11273 218 PPIEE-Y----KNDYP--DDYNE-KH---EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF 286 (452)
T ss_pred CChhh-h----hhccc--ccccc-cc---CCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11100 0 00000 00000 00 011122332 23356788888888887777777778889999999998899
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--chhhH-HHHHHHHHHHHHHHhHhcc--cchHHHH-HHHHHhhhhhhH
Q 013707 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKL-LSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFAT 353 (438)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~ 353 (438)
+..+.+.......++.+++. ++.|+++||+ +||.. ......+..++.+.+.... +.+.... ....+.......
T Consensus 287 s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 365 (452)
T PRK11273 287 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPV 365 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHH
Confidence 99999988888888888888 8889999998 44432 2222333333333332222 2222222 233333322223
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhh-hhHhHHHHHHHH
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIV-SPLIFSPLTALF 398 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~ 398 (438)
+....+..|.+|++.||++.|+.+....+|+.+ +|.+.|.+.|+.
T Consensus 366 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~ 411 (452)
T PRK11273 366 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 411 (452)
T ss_pred HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh
Confidence 334456779999999999999999999888765 799999999985
No 32
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=9.2e-35 Score=269.23 Aligned_cols=343 Identities=24% Similarity=0.320 Sum_probs=268.9
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (438)
+++..++..++.++..|.+|.+.. ++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLA-------EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHH-------CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH-------HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 356778888899999999994332 3667777889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----h
Q 013707 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 168 (438)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~ 168 (438)
++..+..++++ .+.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+...++|.++||.+++.+ +
T Consensus 74 ~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 74 LGSLLLAFASN---FWLLLIARFLLGI-GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred hHHHHhhhhhh---HHHHhhhcccccc-ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 99666667677 7799999999999 88999999999999999999999999999999999999999999874 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchh
Q 013707 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248 (438)
Q Consensus 169 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (438)
||+.|++.+++.++..++.....++++++++++++.++ + .+.++++++.++.++++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~--------------~-------~~~~~~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKES--------------E-------SKKPKPLKPGFKSLFKNPVL 208 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTT--------------T---------HHHCCCH-CTHHHHHHCC
T ss_pred cccccccccchhhhhhhhHhhhhhhccccccccccccc--------------c-------cccccccccccccccccchh
Confidence 99999999999887766544566665554433211000 0 00111222223345566766
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhHcCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+......++..+.......+.|.|+++.+|++ ..+.+.......+...++. ++.+++.||+++++..........+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 65556666666677778999999988889999 7899999999999999988 888999999998777766666666655
Q ss_pred HHhHhccc---chHHH-HHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhh
Q 013707 328 FICSISWS---AWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (438)
Q Consensus 328 ~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 388 (438)
..+.+... ....+ ...+.+++.+...+...++..+.+|++++|++.|+.+...+++..+||
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 288 LGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55544332 23333 367788889999999999999999999999999999999999999987
No 33
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1e-33 Score=264.80 Aligned_cols=353 Identities=15% Similarity=0.172 Sum_probs=276.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCc
Q 013707 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (438)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (438)
||.+. ||.++.+.+..++...+.+...|.+|.+.++ +++.+..+.|++.+.+.++..+++++.|+++||+||
T Consensus 1 ~~~~~-~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-------~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~ 72 (395)
T PRK10054 1 MNLSL-RRSTSALLASSLLLTIGRGATLPFMTIYLSR-------QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDK 72 (395)
T ss_pred CCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 44433 4567778888999999999999999998754 567778899999999999999999999999999999
Q ss_pred chHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh
Q 013707 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 81 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (438)
|+++..+.+...++.+..+++++ ++.+++.|.+.|. +.+...+...++..|..|+++|++++++.....++|..+|
T Consensus 73 k~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 73 KRYMLLAITAFASGFIAIPLVNN---VTLVVLFFALINC-AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred chhHHHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 8888888988888 6677788899999999999999999999999999999999
Q ss_pred HhhhHHh---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH
Q 013707 161 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (438)
Q Consensus 161 ~~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (438)
|.+++.+ +|+.+|++.+++.++..+...+.+||++++++++ ++ + . .+
T Consensus 149 p~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------------------------~~-~---~-~~ 198 (395)
T PRK10054 149 PPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-------------------------TG-S---V-WS 198 (395)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-------------------------hh-h---h-hh
Confidence 9998875 8999999888777666555555566654322111 00 0 0 01
Q ss_pred HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q 013707 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (438)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (438)
.+...++|.++...+..++..+.......+.+.|..+. .+.+....+.+...........+ ...+++.||.++|+.
T Consensus 199 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 199 -PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPL 276 (395)
T ss_pred -hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhH
Confidence 12245667777766666666666555556667776433 35566677777777777666666 667799999999999
Q ss_pred HHHHHHHHHHHHHHhHhcc-cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHH
Q 013707 316 LSLGLFAACINMFICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (438)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 393 (438)
+..+..+..++...+.+.. +.+...+ ..+.+++.....|...+.+.+..|++.++++.+..+ ...+|..+||.++|.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 8888888888877776543 4433333 567788888878888899999999999999998755 677899999999999
Q ss_pred HHHHH
Q 013707 394 LTALF 398 (438)
Q Consensus 394 l~~~~ 398 (438)
++|+.
T Consensus 356 l~~~~ 360 (395)
T PRK10054 356 ILTTL 360 (395)
T ss_pred HHHHc
Confidence 99984
No 34
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=5.1e-33 Score=260.84 Aligned_cols=343 Identities=16% Similarity=0.156 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++....+....++..++..+..|.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 75 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAA--------DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL 75 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 444555555566677888999999998866 456677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+.++..++.+...++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|+++++..+....+|..+||.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 76 GLFIFALSSLGLALSNN---IETLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHHHHHHHHcc---HHHHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 8999999999999 8888889999999999999999999999999999999999988876
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
.+||..|++.++..++..+...+..||++++++++ +..+..+ ..+..
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~-~~~~~ 202 (385)
T TIGR00710 152 ILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI----------------------------QISTYFE-TFLLL 202 (385)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC----------------------------CHHHHHH-HHHHH
Confidence 38999999988877766666666667654322110 0000112 23335
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (438)
.++|.++...+...+..........+.|.++++.+|+++.+.+.+.....++.+++. ++.+++.||+++|+.+..+..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHH
Confidence 566777766666655556666677778989988899999999999999999988888 8889999999999988888777
Q ss_pred HHHHHHHhHhcc----cch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 323 ACINMFICSISW----SAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 323 ~~~~~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
..++..++.... +.+ .... ..+.+++.+...+.......|..| +++|++.++.+.....++.+.+.+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 282 FAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666554432 122 2222 455677788888888888888776 78999999999888776666666666
No 35
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=267.43 Aligned_cols=358 Identities=13% Similarity=0.118 Sum_probs=259.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++.+...++..+.+.++.....+..|.+.+ +++.+..+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKA--------DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 345666677778888888888888888755 556677888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+.++.+++.++++++++ ++.+++.|+++|+ +.+...+....++.|++|+|+|++++++...+..+|.++++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 89 SIVAYSVGTGLSGLASG---VIMLTLSRFIVGM-GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999999887765
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
.+||+.|++.....+ ..+......||+++.++++.+ + .+++ ++.. ....+...+..
T Consensus 165 l~~~~~w~~~f~i~~~~~~-~~~~~~~~~p~~~~~~~~~~~---------~--~~~~-----~~~~---~~~~~~~~~~~ 224 (426)
T PRK12307 165 FAEAYGWRAAFFVGLLPVL-LVIYIRARAPESKEWEEAKLS---------G--KGKH-----SQSA---WSVFSLSMKGL 224 (426)
T ss_pred HcccCCHHHHHHHHHHHHH-HHHHHHHHCCCChHHHHhhhh---------c--cccc-----cccc---hhhhhHHHHHH
Confidence 489999988654322 222222223433221111000 0 0000 0000 00011112234
Q ss_pred cccchhHHHHHHH---HHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 243 RSSVTLSQAAVVA---FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 243 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
.+++.++...... +...........++|.|+++ .|+++.+.+...+...++.++++ ++.+++.||+++|+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 4455554333222 22222333456788999987 59999999999998999999988 8889999999999988888
Q ss_pred HHHHHHHHHHhHhccc-chHHHHHHHHHhh--hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 320 LFAACINMFICSISWS-AWVPYATTAFSVL--VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
..+..+..+......+ ........+++.+ .....+....++.|.+|+++||++.|+.+....+++.++|.+.|.+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 303 LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 8777666554443332 2222222333322 223345566778999999999999999999999999999999999988
Q ss_pred HH
Q 013707 397 LF 398 (438)
Q Consensus 397 ~~ 398 (438)
..
T Consensus 383 ~~ 384 (426)
T PRK12307 383 TM 384 (426)
T ss_pred cc
Confidence 63
No 36
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=6.6e-33 Score=266.63 Aligned_cols=378 Identities=13% Similarity=0.073 Sum_probs=287.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++.++.++++.++..++.....+.+|.+.+ +++.+..+.|++.+.+.++..++.+++|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ--------SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--------HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 446677888888888899999999999976 456677788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+..+.+++.+++.++++ ++.+++.|+++|+ +.+...|...+++.|++|+++|+++.+..+...++|..+||.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT---LNELLLARVLQGV-GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHhCC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999988889888 8899999999999 8888889999999999999999999999999999999999988876
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhc--------cccccCCCCCCCC----------
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE--------TEGVNQNESNSPV---------- 224 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---------- 224 (438)
.+||+.|++..+...+..+......|+.+.+.. +.|........ .....+.......
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGV 235 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 489999999888776666655555555433222 11211110000 0000000000000
Q ss_pred ------CccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHH
Q 013707 225 ------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (438)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 298 (438)
..++++..++..+ .+ +++||.++......++..........+.|.|+++.+|.++.+.++......++..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 236 VALLLYLLHARNNNRALFS-LK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGM 313 (471)
T ss_pred HHHHHHHHHHhcCCCCccC-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000011111 11 456777888777778777777777788899999888999999999888888877777
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc-cch--HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHH
Q 013707 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-SAW--VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (438)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (438)
. .+.+++.||+++|+.+..+..+..+...++.+.. +.+ .... ..+.|++.+...+..+....+.+|++++|++.|
T Consensus 314 ~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 314 K-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred H-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHH
Confidence 6 7789999999999999888887777766655532 222 2222 455677788888888899999999999999999
Q ss_pred HHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 375 CISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 375 ~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
+.++.+.+|..+|+.+.|.+.+..+.
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999987643
No 37
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.5e-32 Score=258.31 Aligned_cols=374 Identities=12% Similarity=0.122 Sum_probs=268.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
++|.+....++.++..++.+...+.++.+.+ |.+.+..+.|++.+.+.++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~ 82 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLK--------ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM 82 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHH--------HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 4678888899999999999888888888875 44667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hc-ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhh-hhh
Q 013707 86 LPLTLSIIPLAILA---YR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF-VCG 160 (438)
Q Consensus 86 ~~~~~~~~~~~~~~---~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g 160 (438)
.+..+.+++.+++. .. ++ ++.+++.|+++|+ +.+...+...+.+.|..|+|+|++++|+.+...++|. ++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~-g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGL-GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHc-chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888876553 22 45 7888899999999 7777777788889999999999999999999999996 578
Q ss_pred HhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchh
Q 013707 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (438)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (438)
|.+++. +||+..+|......++..++..+..+|.+++++++ ++ . +..+.+
T Consensus 159 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~-----~---~~~~~~ 212 (402)
T TIGR00897 159 SYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ------------------TR-----E---KFSELG 212 (402)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc------------------CC-----c---chhhHH
Confidence 888765 47666555544433333333344445432211110 00 0 001112
Q ss_pred HHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
+..+.++++|.++...+..++.........++.|.|.++ +|+++.+.+.+.....++..++. +..++++||+++|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHH
Confidence 223346678888877777777777777888899999876 79999999988888889999988 8889999999988765
Q ss_pred H-HHHHHHHHHHHHhHh-----cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhH
Q 013707 317 S-LGLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 389 (438)
Q Consensus 317 ~-~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 389 (438)
. .+.+...++...+.. .++.+..+. ..+.+++.+...+ ......+. ++++||++.|+.+....+++.++|.
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHH
Confidence 3 333333333222221 122333323 4556666655444 34555665 5579999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 013707 390 IFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLL 429 (438)
Q Consensus 390 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (438)
+.|.++|..+ ....+.+.+++.+++.....++
T Consensus 369 i~g~l~~~~g--------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 369 IAVLFIGFFG--------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHhhcc--------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999732 2223444555555555555444
No 38
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.1e-33 Score=261.44 Aligned_cols=333 Identities=15% Similarity=0.087 Sum_probs=259.2
Q ss_pred hhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhccc
Q 013707 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (438)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~ 103 (438)
.....+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+..+.+++.+.++++++
T Consensus 19 ~~~~~~~~~~~~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPLGR--------YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 3445567777654 55777889999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHH
Q 013707 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIV 179 (438)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~ 179 (438)
++.+++.|++.|+ +.+...+.....+.|++| |+|+++.++.....++|..+++.+.+. .+||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASA-GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhH-HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999 888877788888899887 679999999999999998765544443 3799999999988
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHH
Q 013707 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (438)
Q Consensus 180 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
.++..+..++.+||+++++++++ ++ . .++..+.+ ...++|.++...+..++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-----~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTN-----------------IE-----V-SVKDYTVW----EMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHHHHHHHHHheecCchhccccC-----------------cc-----c-chhhhhHH----HHHcCccHHHHHHHHHHHh
Confidence 87776666666666543221110 00 0 00001112 2445666666666555555
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchH-
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV- 338 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 338 (438)
........+.+.|.++ +|.++.+.+...+...+...+++ +..+++.||++||+.+..+.....++.+.+.+.++...
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDV 296 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhH
Confidence 5555556667777665 78999888999999999999988 88899999999999998888888888877766554322
Q ss_pred -HHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 339 -PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 339 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
... ..+.+++.+...+...++..|.+|+++|+++.|+.+....+|..++|.+.|.+.++.
T Consensus 297 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 297 LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 222 345566666667777888999999999999999999999999999999999998863
No 39
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=7e-34 Score=274.26 Aligned_cols=376 Identities=13% Similarity=0.115 Sum_probs=258.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
+......++.+...++...+.+..|.+.+++..+-.++.+.+..+.|++.+++.++..++++++|+++||+|||+++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~ 91 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIA 91 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 34445556677778888888888888877765444556788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---------ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhh
Q 013707 88 LTLSIIPLAILAYR---------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (438)
Q Consensus 88 ~~~~~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (438)
.++..++.+.++++ ++.+.++.+++.|+++|+ +.|...+...++++|++|+++|+++++..+.+..+|..
T Consensus 92 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 92 AVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI-GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh-hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 99998888877763 233335778899999999 88999999999999999999999999999999999998
Q ss_pred hhHhhhHH------------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCc
Q 013707 159 CGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 226 (438)
Q Consensus 159 ~g~~l~~~------------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (438)
+++.++.. .+||++|++.+++.++.. +..+++||+|++..++++.++..+..++....++ .++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~----~~~ 245 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL----ATQ 245 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh----HHH
Confidence 88776542 489999999888776654 4456789987532111111111000000000000 000
Q ss_pred cccccCCchhHHHHh-hcccchh-----HHHHH----HHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHH
Q 013707 227 PVCKKIPSIRDLICL-LRSSVTL-----SQAAV----VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGT 296 (438)
Q Consensus 227 ~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 296 (438)
..++.++..+. ..+.+.. ..... ..+...........+.|.+.++ .|.+...........++..+
T Consensus 246 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~ 320 (479)
T PRK10077 246 ----ALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINL 320 (479)
T ss_pred ----HHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHH
Confidence 00000110000 0000000 00111 1111111222334455666655 68887776777777778888
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc--c-chHHH--HHHHHHhhhhh-hHHHHHHHHhhcCCCCcch
Q 013707 297 ISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--S-AWVPY--ATTAFSVLVVF-ATPSFRSIVSKQVGPNEQG 370 (438)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g 370 (438)
++. ++.++++||+|||+.+..+.++.+++.+.+.... + ..... ...+.+.+.+. ..|..+.+++|.+|+++|+
T Consensus 321 i~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 399 (479)
T PRK10077 321 TFT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 399 (479)
T ss_pred HHH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHH
Confidence 888 8889999999999999999998888877765432 2 22111 23333333333 3467889999999999999
Q ss_pred hHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 371 KAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 371 ~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
++.|+.+..+.++..+++.+.+.+.
T Consensus 400 ~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 400 KALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999988876554
No 40
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=9.9e-33 Score=262.01 Aligned_cols=377 Identities=16% Similarity=0.179 Sum_probs=307.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
++|.+..++.+.+++.+|..+....++.++.+ .+-|+...++++++..++.++.+++.|.++||++||++++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~--------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ--------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 35678889999999999999999999998774 3556688899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc--ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 86 LPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
.+.++.++.....++. .+....+.+++.-++.|+ +.+...|+.++++.|..|+++..+++++.+...+++.++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9998877665544432 222227889999999999 8999999999999999999999999999999999999999999
Q ss_pred hHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
+|.+ |-.+.|.+.++..++. +......++++++++. +.++..+.+++.+
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~-i~~l~~~~~~~~~~~~--------------------------~~e~~~~~l~~G~ 211 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLIS-ILALLRWKPPPPPSSL--------------------------PRERFFSALREGL 211 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccccccccc--------------------------chhhhhhhHHHHH
Confidence 9873 7788898887765444 3333334332221111 1112234678888
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
+..+++|.+...++..++.++........+|.+.++.+|.++...|++.+..+++.++++ ++.+++.+|+++++++..+
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLA 290 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHH
Confidence 889889988888777777777777778889999999999999999999999999999999 7788999999999998899
Q ss_pred HHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 320 LFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.+..+++.+.+++.++.+.... .++.|++.....+..++.+++.+|++.||++++++++....+..+|..+.|.+.+..
T Consensus 291 ~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 291 SLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888876665 677788888888999999999999999999999999999999999999999999974
Q ss_pred hcCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013707 399 LSKGAPFNFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
.....+.++++..+++..+..
T Consensus 371 --------g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 371 --------GVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHH
Confidence 233344555555555444443
No 41
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.5e-32 Score=254.81 Aligned_cols=351 Identities=15% Similarity=0.106 Sum_probs=266.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCc
Q 013707 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (438)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (438)
||.++.+|.+.......++..++.....|.+|.+.+ +++.+..+.+++.+.+.++..+++++.|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMAR--------DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 554555666666666677777888889999999865 556777889999999999999999999999999999
Q ss_pred chHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh
Q 013707 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 81 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (438)
|+++..+.....++.+...++++ ++.+++.|++.|+ +.+...+....+..|..++++|+++++..+.+..++..+|
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGL-GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 8999999999999 7777778888899999999999999999999999999999
Q ss_pred HhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchh
Q 013707 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (438)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (438)
|.+++. .+||+.|++.++..++..+...+..||++++++++ .+.+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 197 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------------------------------TRVL 197 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------------------------------hHHH
Confidence 988876 38999999988776665555556677754322111 0122
Q ss_pred HHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
+.++...++|.++...+..+.............+.++++.+|.++.+.+.+......+..+++ .+.+++.||.+++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~ 276 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMWQ 276 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 333345566766665555555555555556677888888889999999998888888877777 7788999988743332
Q ss_pred HHH-HHHHHHHHHHhHhc--ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 317 SLG-LFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 317 ~~~-~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
... .....+........ .+.+.... ..+.+++.+...|...+...+..| +++|++.++.+....+|..+++.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 22222222222221 23333333 567788888889999999998887 68899999999999999999998888
Q ss_pred HHHH
Q 013707 393 PLTA 396 (438)
Q Consensus 393 ~l~~ 396 (438)
.+.+
T Consensus 356 ~~~~ 359 (394)
T PRK11652 356 MLPQ 359 (394)
T ss_pred HccC
Confidence 7644
No 42
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.8e-33 Score=263.21 Aligned_cols=359 Identities=14% Similarity=0.087 Sum_probs=264.8
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHH
Q 013707 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (438)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~ 96 (438)
.+...+......+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVE--------EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHH--------HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 34455566666777777654 4566778899999999999999999999999999999999999999999999
Q ss_pred HHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhH-hhhHH----hhHHH
Q 013707 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT-LAARF----LSTTS 171 (438)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~----~~w~~ 171 (438)
+..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..++| .++.. .+||+
T Consensus 76 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 76 FFGFSTS---LWVMAALWALNGI-FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred HHHHhhh---HHHHHHHHHHHHh-hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 9999998 9999999999999 88888899999999999999999999999999999999998 45443 48999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHH
Q 013707 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA 251 (438)
Q Consensus 172 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (438)
.|++.+++.++..+...+..||++++++.+++.++.. ++.+.. ++.++++.+..+...+...++|.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN---------EEPDGD-AEKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc---------cccccc-cccccccccchHHHHHHHHhcchHHHH
Confidence 9999888777766666667777655432211100000 000000 000011111222333445677888888
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hhH-HHHH-HHHHHHHHH
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKL-LSLG-LFAACINMF 328 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~-~~~~~~~~~ 328 (438)
.+..++..........+.|.|+++.+|+++.+.+.......++.+++. ++.+++.||..+ |+. .... .....++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 888888877888888999999999899999999999999999999988 888999998643 332 2221 122222222
Q ss_pred HhHhc--ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 329 ICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 329 ~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
..... .+.+.... ..+.+.......+....+..|.+|+++||++.|+.+...++|..++|.+.|.+.|+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 22221 12222222 344455444555666778899999999999999999999999999999999999974
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.6e-33 Score=263.00 Aligned_cols=367 Identities=17% Similarity=0.155 Sum_probs=264.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHH
Q 013707 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (438)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (438)
..++..+...++.....+..|.+.+ +++.+..+.|++.+...++..+++++.|+++||+|||+.+..+.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 21 LSFLIMLMDGYDLAAMGFAAPAISA--------EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhh--------ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 3444455555666667777777754 45667788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----
Q 013707 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (438)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~---- 167 (438)
.++.++..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+||.+++.+
T Consensus 93 ~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 93 SVFTLLCALATN---VTQLLILRFLAGL-GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHHHHHccc---hHHHHHHHHHHhc-ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999988 8899999999999 88888899999999999999999999999999999999999888764
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC--CcccchhccccccCCCCCCCCCccccccCCchhHHHHhhccc
Q 013707 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL--TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (438)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (438)
+|+..|++.+++..+..++....+||+++...++++ .++..+...++..+++++... ++.++.+..++..+.++++
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 246 (398)
T TIGR00895 169 GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALP--EQKATQGTKRSVFKALFQG 246 (398)
T ss_pred cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccc--ccccccchhhHHHHHHhcc
Confidence 899999988766666666667778887653222111 001111111111111100000 0001111222323323322
Q ss_pred ---chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013707 246 ---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (438)
Q Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (438)
+......+..++..........+.|.+. +.+|+++.+.+.......++.+++. ++.+++.||+++|+........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 324 (398)
T TIGR00895 247 KTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLLG 324 (398)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHHH
Confidence 2233334444455556666677788444 4579999999999999999999988 8889999999998554443333
Q ss_pred HHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHH
Q 013707 323 ACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 394 (438)
............+.+..+. .++.+++.+...+...++..|.+|+++||++.|+.+....+|..+||.+.|.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 325 AVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333333332344444444 57778888889999999999999999999999999999999999999999875
No 44
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.2e-31 Score=253.43 Aligned_cols=347 Identities=13% Similarity=0.087 Sum_probs=263.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.+..+.+..++..+......+.+|.+.+ +++.+..+.|+..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~--------~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQ--------AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 4455666667777888888888888844 55777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 89 TLSIIPLAIL---AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 89 ~~~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
.+.+++.+++ .++++ ++.++++|+++|+ +.+...+..+.++.|+.|+++|.+.++..+....+|..+||.++.
T Consensus 99 ~~~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~-g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 99 FLYALGAALFWPAAEIMN---YTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999875 45778 8999999999999 889999999999999887777777899999999999999887753
Q ss_pred H------------------------------hhHHHHHHHHHHH-HHHHHHHHHHhcccCCCCCCCCCCCcccchhcccc
Q 013707 166 F------------------------------LSTTSAFQAATIV-SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG 214 (438)
Q Consensus 166 ~------------------------------~~w~~~f~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (438)
. .+||.+|+....+ .++..+......||.+++++++
T Consensus 175 ~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~------------- 241 (438)
T PRK10133 175 SLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD------------- 241 (438)
T ss_pred HHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-------------
Confidence 2 2566677644333 2222222222334321110000
Q ss_pred ccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHH-HhHcCCChhHHHHHHHHHHH
Q 013707 215 VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFADLMLIAGL 293 (438)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 293 (438)
++ ..+..++ .+.+.++|.++...+..++..........+.+.|+ ++.+|.++.+.+..+....+
T Consensus 242 -----------~~---~~~~~~~-~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 242 -----------AK---QGSFSAS-LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred -----------cc---ccchhhh-HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 00 0001111 22345567776666666777777777778888885 56689999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHH
Q 013707 294 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 373 (438)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 373 (438)
+.++++ +..+++.||+++|+.+..+..+..+.+++..+.++.+......+.+++.+..+|..++...+..|+ +.+++.
T Consensus 307 ~~~vG~-~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as 384 (438)
T PRK10133 307 CFFIGR-FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGS 384 (438)
T ss_pred HHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccch
Confidence 999999 888999999999999888887777766666555544333446788999999999999999998874 567888
Q ss_pred HHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 374 GCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 374 g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
++.. ....|+.++|.+.|.+.|..
T Consensus 385 ~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 385 SFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred hHHh-HHhccchHHHHHHHHHHHhc
Confidence 8776 45578999999999998863
No 45
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=7.3e-32 Score=256.38 Aligned_cols=366 Identities=13% Similarity=0.079 Sum_probs=249.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHhhhhcchhhH
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 125 (438)
+.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++.++. +.++.+.+.|++.|+ +.+..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~-~~g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW-FQGMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH-Hhhcc
Confidence 6677889999999999999999999999999999999999999999988887765321 126778899999999 77888
Q ss_pred hhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH-----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 013707 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (438)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 200 (438)
.+.....+.|++|+++|++++++.+...++|..++|.+.+. .+||..|++.+++.++..+..++.+||++++.+.
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 88888999999999999999999999999998888765443 4899999999888877766777778887653221
Q ss_pred CCCCcccchhccccccCCCCCCCCCccccccCCchhHH-HHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCC
Q 013707 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (438)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (438)
++.. +.+++..++..+ +.+++ .+.++. .+...+++.++...+..++.........++.|.|+++..|+
T Consensus 216 ~~~~-----~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 216 PPIE-----EYRNDYPDDYNE-----KAEQE-LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred CCch-----hccccccccccc-----ccccc-cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 1000 000000000000 00000 112221 22356778888877777777777778888999999998899
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH---HHHHHHhHhcc--cchHHHH-HHHHHhhhhhhH
Q 013707 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA---CINMFICSISW--SAWVPYA-TTAFSVLVVFAT 353 (438)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~ 353 (438)
++.+.++......+.++++. ++.+++.||+++++....+.... .++.+.+...+ +.+.... .+..+.+.....
T Consensus 285 s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 363 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV 363 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH
Confidence 99999999988989999988 88899999996433222222211 12222222221 2222222 223333222222
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhh-hhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
........|..|+++||++.|+.+...++++ .++|.+.|.+.|+.+ ....+.+.+++.+++.+......++
T Consensus 364 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 364 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG--------WDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc--------chHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2223456788999999999999999988874 689999999999742 1223333344444455555544444
Q ss_pred h
Q 013707 433 V 433 (438)
Q Consensus 433 ~ 433 (438)
+
T Consensus 436 ~ 436 (438)
T TIGR00712 436 E 436 (438)
T ss_pred c
Confidence 4
No 46
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=6.4e-32 Score=256.43 Aligned_cols=357 Identities=13% Similarity=0.049 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHH-HHHHHHHHHHHHHhhhhcccccccCcchH
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 83 (438)
.|++....++++.+++.++...+.+..|.+.+|+ +.+..+ ......+ .......+...+++++.|+++||+|||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~-~~~~~~--~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTF-FPAGNE--FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCc--hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 3455677788999999999999999999888765 222212 1111101 12223344456788999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcccchhHH--------HHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHh
Q 013707 84 LTLPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSA 155 (438)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 155 (438)
++.+..+..++.++++++++ ++ .+++.|+++|+ +.+...+....+++|++|+++|++++++.+...++
T Consensus 89 l~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPG---YATIGLAAPLLVLLGRLLQGF-SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhhc-cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 99999999999999999998 54 46899999999 88888888899999999999999999999888877
Q ss_pred hhhhhHhhhHH------------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCC
Q 013707 156 SFVCGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP 223 (438)
Q Consensus 156 g~~~g~~l~~~------------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (438)
|..+|+.++.. ++||++|++..... ..........||+++..+++ +
T Consensus 165 g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~------------------~--- 222 (434)
T PRK15075 165 AVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARK------------------H--- 222 (434)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhh------------------h---
Confidence 77766665543 48999999754432 11111111222221000000 0
Q ss_pred CCccccccCCchhHHHHhhcccchhHH-HHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHH
Q 013707 224 VKIPVCKKIPSIRDLICLLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLF 302 (438)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 302 (438)
+ .+.++.++...+++..+. .....++..........+.|.|+++.+|+++.+.++......++.+++. ++
T Consensus 223 --~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 293 (434)
T PRK15075 223 --R------PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-PI 293 (434)
T ss_pred --c------cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HH
Confidence 0 001111222223333332 2333334445566778889999998889999998888888888888888 88
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHH-Hh-Hhcc--cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHh
Q 013707 303 MPLLAPILGEAKLLSLGLFAACINMF-IC-SISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS 377 (438)
Q Consensus 303 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 377 (438)
.|+++||++||+....+..+..+... .. .... +...... ..+.+++.+...+....+..|.+|++.|+++.|+.+
T Consensus 294 ~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 294 GGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHH
Confidence 89999999999987766544432221 11 1112 2222222 344456666666777788899999999999999875
Q ss_pred hHhh-hhhhhhhHhHHHHHHHHh
Q 013707 378 GISS-FANIVSPLIFSPLTALFL 399 (438)
Q Consensus 378 ~~~~-~g~~~g~~~~g~l~~~~~ 399 (438)
.... +++.++|.+.|.+.|+.+
T Consensus 374 ~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 374 SLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHhhhHHHHHHHHHHhcC
Confidence 5554 458889999999999753
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.4e-33 Score=268.37 Aligned_cols=378 Identities=15% Similarity=0.081 Sum_probs=258.3
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHH
Q 013707 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (438)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~ 95 (438)
..++..++.....+.+|....+.......+.+.+..+.|++.+++.++..++++++|+++||+|||+++..+.++.+++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 115 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGA 115 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHH
Confidence 33445556677777888777654222222334667889999999999999999999999999999999999999999999
Q ss_pred HHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh---HH----hh
Q 013707 96 AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA---RF----LS 168 (438)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~----~~ 168 (438)
+++.+.++...++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.++ .. .+
T Consensus 116 ~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 194 (481)
T TIGR00879 116 ILMGLAAFALSVEMLIVGRVLLGI-GVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG 194 (481)
T ss_pred HHHHHhccccchHHHHHHHHHHHh-hhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Confidence 988766553336789999999999 88999899999999999999999999999999999999999998 33 48
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCc-----------cccccCCchhH
Q 013707 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI-----------PVCKKIPSIRD 237 (438)
Q Consensus 169 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 237 (438)
||+.|++.++..++ .+...+++||+++....+++.++..+...+....++++....+ ........+++
T Consensus 195 w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (481)
T TIGR00879 195 WRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGS 273 (481)
T ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 99999996665444 3445567888764321111111111110000000000000000 00000111222
Q ss_pred HHHhhc--ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q 013707 238 LICLLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (438)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (438)
.++..+ +++.++...+..+...........+.|.+.++ .|++..+.+.......++.+++. ++.+++.||+++|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~ 351 (481)
T TIGR00879 274 LFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPL 351 (481)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHH
Confidence 222111 12223333333333333444455666666655 79999888888888888888888 888999999999999
Q ss_pred HHHHHHHHHHHHHHhHh---cc-c------chHH-HHHHHHHhhhh-hhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhh
Q 013707 316 LSLGLFAACINMFICSI---SW-S------AWVP-YATTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (438)
Q Consensus 316 ~~~~~~~~~~~~~~~~~---~~-~------~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (438)
+..+..+.+++++.+.+ .. + .+.. ....+...+.+ ...+....+..|.+|+++|+++.|+.+...+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg 431 (481)
T TIGR00879 352 LLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLA 431 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHH
Confidence 98888888777766652 11 1 1111 22223332322 234666777799999999999999999999999
Q ss_pred hhhhhHhHHHHHHH
Q 013707 384 NIVSPLIFSPLTAL 397 (438)
Q Consensus 384 ~~~g~~~~g~l~~~ 397 (438)
.+++|.+.+.+.++
T Consensus 432 ~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 432 NFIVGFLFPTMLES 445 (481)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999886
No 48
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1.3e-31 Score=251.14 Aligned_cols=371 Identities=13% Similarity=0.103 Sum_probs=256.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHh
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (438)
..++....+++..++..++.++..|.+|.+..+ +++.+..+.|++.+...+...+.+++.|.++||+||||.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-------~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~ 84 (393)
T PRK15011 12 SFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD-------EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSL 84 (393)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Confidence 334566777888999999999999999998754 5577778899998776564444444555459999999875
Q ss_pred -HHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccch--hHHHHHHHHHHHhhhhhhH
Q 013707 85 -TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~ 161 (438)
..+.+..+++..+.+++++ ++.+++.+.+.|. ..+...|...+++.|+.++++| +...+..++..++|.++||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~ 160 (393)
T PRK15011 85 IVFCCLLGVLACTLFAWNRN---YFVLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP 160 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhh
Confidence 4556666677777888888 7776666555554 3456778889999998877655 3445788889999999999
Q ss_pred hhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH
Q 013707 162 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (438)
Q Consensus 162 ~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (438)
.+++. +|||..|++.++..++..+..++.+||++++++++. + + .+ ..+
T Consensus 161 ~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~-----~~------~~~- 212 (393)
T PRK15011 161 PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT---------------G-T-----LE------APR- 212 (393)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc---------------c-c-----cc------ccc-
Confidence 98876 499999999988877776666777887653322110 0 0 00 000
Q ss_pred HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH
Q 013707 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (438)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (438)
++++..+......+...........+.|.|+++.+|+++.+.+.+.+......+++. ++.|+++||+++|+.+.
T Consensus 213 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~~ 286 (393)
T PRK15011 213 -----RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLMR 286 (393)
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHH
Confidence 011222222333333334445556788999988899999999988877777777777 88899999999999877
Q ss_pred HHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 318 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+.....+.+......++.+.... ..+.+++.+...+....+.+|..| +++|++.++++...++|..++|.+.|.+.|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~ 365 (393)
T PRK15011 287 VAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAE 365 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776655555444444444443333 344455555555666677788887 569999999999999999999999999998
Q ss_pred HHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 013707 397 LFLSKGAPFNFPGFSIMCIGLASVRAFTYELLL 429 (438)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (438)
+.+ ....+.+.+++.+++....++.
T Consensus 366 ~~g--------~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 366 IWN--------YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred Hhh--------hHHHHHHHHHHHHHHHHHHHhh
Confidence 632 2223444555555555555544
No 49
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2.5e-31 Score=250.14 Aligned_cols=342 Identities=13% Similarity=0.096 Sum_probs=254.0
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
.+..+...++..++.|.+|.+.+ +++.+..+.++..+++.++..++++++|+++||+|||+++..+.++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~--------~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVR--------DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 34445566677899999998865 4456667789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhH
Q 013707 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 169 (438)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w 169 (438)
+.+++.++++ ++.++++|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++. .+|
T Consensus 94 ~~~~~~~a~~---~~~l~~~r~l~Gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 94 ACAATLFTTS---MTQFLIARFIQGT-SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 9999999999 9999999999999 7777667788899999999999999999999999999999988875 389
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhH
Q 013707 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (438)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (438)
|+.|++.+++.++..+..++.+||++++++++ . ......++ .+...++|.++
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~-------------------------~--~~~~~~~~-~~~ll~~~~~~ 221 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP-------------------------F--SAKSVLRD-FRNVFRNRLFL 221 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCC-------------------------C--ChHHHHHH-HHHHHcCHHHH
Confidence 99999999887777666566778865321110 0 00011222 33455678888
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 013707 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (438)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (438)
...+..++..........+.|.++++.+|.++.+.++.......+..++. .+.+++.++..+++.......+..++..+
T Consensus 222 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~ig~~l 300 (413)
T PRK15403 222 TGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN-AIVARFVKDPTEPRFIWRAVPIQLVGLAL 300 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCchhHHHHHHHHHHHHHHH
Confidence 87777777777777777888999999899999999998877777777777 45555554433333322222222222222
Q ss_pred hHh----cccch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 330 CSI----SWSAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 330 ~~~----~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.. ..+.+ ..+. .++.+++.+...|...+..-. -.+..+|++.++.+.....+...++...+++.++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 301 LIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 211 22322 2223 566778888888877754322 2233579999999999999999999999988776
No 50
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.1e-32 Score=263.15 Aligned_cols=382 Identities=13% Similarity=0.107 Sum_probs=256.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
......++.+.+.++.+......|.+..+.. .++...+..+.+++.+...++..+++++.|+++||+|||+++..+.
T Consensus 17 ~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 17 AIVIAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 3445566777888888888888887655421 1133455667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccch---hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
++..++.++++++++.. .++.+++.|+++|+ +.+...+....++.|++|+++|++++++.+....+|..+|+.++.
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGV-GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876421 15789999999999 889999999999999999999999999999999999988887654
Q ss_pred H---------------------------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---CC-CCCcccchhcccc
Q 013707 166 F---------------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD---DD-DLTRPIITEETEG 214 (438)
Q Consensus 166 ~---------------------------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 214 (438)
. .+||++|.+.++..++. .+..+++||+|+... ++ +++++..++..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 2 26999998887776544 444678999998522 21 1122222221111
Q ss_pred ccCCCCCC-CC-CccccccCCchhHHHHhhcccchhHHH---HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHH---
Q 013707 215 VNQNESNS-PV-KIPVCKKIPSIRDLICLLRSSVTLSQA---AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--- 286 (438)
Q Consensus 215 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 286 (438)
+.+++.++ .. ++.++..+.++++.++...+++..... ....+...+.+++...+.|.++++ .|+++.+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~ 330 (502)
T TIGR00887 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAY 330 (502)
T ss_pred ccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHH
Confidence 11111100 00 000011112455544322222222211 122233334455566677888866 5876542211
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhccc----chHHHHHHH-HHhhhhhh
Q 013707 287 ---------LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS----AWVPYATTA-FSVLVVFA 352 (438)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~ 352 (438)
......++.+++. ++.+++.||+|||+.+..+..+..++..++....+ ........+ ..++....
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGP 409 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence 1222333444555 77889999999999988888777776665554321 111111111 12222234
Q ss_pred HHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+..+.+..|.+|++.|+++.|+.+....++++++|.+.+.+.+.
T Consensus 410 ~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 410 NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 456777889999999999999999999999999999999999874
No 51
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=3e-31 Score=249.10 Aligned_cols=344 Identities=16% Similarity=0.132 Sum_probs=258.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|.+.......+....+.....+.+|.+.+ +++.+..+.++..+.+.++..+++++.|+++||+|||+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAA--------DLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 45666777788888888888999999876 4466677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.++.+++...+.++++ ++.+++.|+++|+ +.+...+...+++.|.+|+++|+++++..+....+|..++|.+++.+
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGI-GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 8889999999999 88888888999999999999999999999999999999999888763
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhc
Q 013707 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (438)
Q Consensus 168 ----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (438)
+||+.|++.+.+.++..+.....+||++++++++ + . ...++..+ ..
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------------------~-~---~~~~~~~~-~~ 200 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-------------------------A-S---SKPRENSE-SL 200 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-------------------------c-c---chHHHHHH-HH
Confidence 8999999998887777666667777764332110 0 0 00111112 23
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
+++.++...+...+..........+.|.+.++.+|+++.+.+...+..+++.+++. +..+++.||+++|+.+..+..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 44544444444333333344455666888888889999999999999999999988 88899999999999999888888
Q ss_pred HHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 324 CINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
.++.+.+...++.+.... ..+.+.+.+...+.. ...+..|.++|+ |.......+++.+++.+.+++.++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 280 LAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 887777766655443222 334344444433333 223344554443 44445566777888888888888753
No 52
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.3e-31 Score=250.09 Aligned_cols=362 Identities=12% Similarity=-0.015 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH-H
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL-T 89 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~-~ 89 (438)
+.+.+..+...++.++..|.+|.+.+ |.+.+..+.|++.+.+.+...++++++|+++||+|||+...... .
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~--------~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 78 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK--------GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 44667778888889999999999986 45777899999999999999999999999999999854332211 1
Q ss_pred HHHHHH-HHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 90 LSIIPL-AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
...+.. ..+..+++ ++.+++.|.++|. +.+...|...++..|+ +++|++.+|......++|.++||.+++.+
T Consensus 79 ~~~l~~~~~~~~~~~---~~~l~~~~~l~~~-~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~ 152 (382)
T TIGR00902 79 ASAIFAAAFSAGAHN---AWLLFIAIGLFAL-FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLI 152 (382)
T ss_pred HHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 23345677 8999999999998 6666778888887765 47889999999999999999999988764
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcc
Q 013707 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (438)
Q Consensus 168 ---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (438)
|||..|++..... +..+. .+.++|+++++++++ + ++.+ +.++ .+...|
T Consensus 153 ~~~g~~~~f~~~~~~~-~~~~~-~~~~~~~~~~~~~~~------------------~-----~~~~---~~~~-~~~~l~ 203 (382)
T TIGR00902 153 GMFDEQNILAILTAGL-AFMLI-GFLIKPTIPPKDAIP------------------E-----DESQ---GDSA-FIALLK 203 (382)
T ss_pred HHcChhHHHHHHHHHH-HHHHH-HHHcCCCCCCCcccc------------------c-----cccc---cchh-HHHHHc
Confidence 8999998876553 22222 333444322111110 0 0000 1112 223556
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++...+..++.........++.|.|+++ .|.++.+.|.......+..++.. ...+++.||+++|+.+..+.+...
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHHHHH
Confidence 7888888888888888888899999999987 79999999999998777777776 888999999999999999999999
Q ss_pred HHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhh-HhhhhhhhhhHhHHHHHHHHhcCC
Q 013707 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLTALFLSKG 402 (438)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~g~~~~g~l~~~~~~~~ 402 (438)
+....+.+.++.+..+. ..+.++..+...+....++++. |++++++.+++++. ...+|..++|.++|.++|+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g--- 357 (382)
T TIGR00902 282 GRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG--- 357 (382)
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 99999888888776665 7888999999999999999987 99999999999874 568999999999999999842
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHH
Q 013707 403 APFNFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
...+...+++.+++..+..
T Consensus 358 ------~~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 358 ------AGTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 1234445555555544433
No 53
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-32 Score=238.39 Aligned_cols=375 Identities=15% Similarity=0.094 Sum_probs=304.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|+++.-.+...+.++...+..|+.+.+ .+|+++|+.|.+++.++..+...+..++.|.+.||+|.|++...
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i--------~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~ 84 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFI--------KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL 84 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhh--------ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHH
Confidence 5667777777777777888888888777 45889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhh----hhhHh
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF----VCGTL 162 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~----~~g~~ 162 (438)
+.++..+-++..+++...+.++++++.+++.|+ + |....+...++++++|||++|.++|+.. ..|+|. .++|.
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-A-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc-c-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 999999999999999775556799999999999 5 4445689999999999999999999998 666665 45677
Q ss_pred hhHHhh---HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchh-HH
Q 013707 163 AARFLS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR-DL 238 (438)
Q Consensus 163 l~~~~~---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 238 (438)
+....+ |+..-.+..+..++..+..++.+.|.|+.+...+ +.+ ..
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~-------------------------------~~~~~~ 210 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK-------------------------------PQLPAQ 210 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc-------------------------------ccchhH
Confidence 777777 9999888888877878888888888876433220 111 33
Q ss_pred HHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q 013707 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (438)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (438)
++..+++++.|...+.++....++.++..++|.|+++++|.++.++|.......+.+.+.+ .++|+++||+|.++.+..
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHHH
Confidence 4457778999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHhHhcc-------cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHh
Q 013707 319 GLFAACINMFICSISW-------SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (438)
Q Consensus 319 ~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 390 (438)
.+..++++..+..+.. +.+.... ....+++.+......+.++..++| ++.|.+.|+...++.+|+..-|..
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHH
Confidence 9988888888877764 2222233 345566677777777778887776 688999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 013707 391 FSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 391 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
.|..++.+++ ....+.+...+.+++.+..+..+.+
T Consensus 369 ~g~~~~~tg~-------~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 369 FGVSLDLTGS-------YTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHhccc-------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998542 1223444445555555555544444
No 54
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=259.54 Aligned_cols=377 Identities=14% Similarity=0.173 Sum_probs=259.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++.+..+++..+++.++.....+.+|.+.+ +++.+..+.+++.+.+.++..+++++.|+++||+|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQG--------EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 346667788888889999999999988865 456777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
+.++.+++.++.+++++ ++.+++.|++.|+ +.+...+...+++.|.+|+++|+++++.......+|..++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 91 SIVLFSVGTLACGFAPG---YWTLFIARLVIGM-GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999999999 8888888999999999999999999999999999999999988876
Q ss_pred h----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCC------------ccccc
Q 013707 167 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK------------IPVCK 230 (438)
Q Consensus 167 ~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 230 (438)
+ +||+.|++..... +..+......||+++.++++++..+..+ ..+.....+.+.... .....
T Consensus 167 l~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T PRK03893 167 VVPVWGWRALFFIGILPI-IFALWLRKNLPEAEDWKEKHAGKAPVRT-MVDILYRGEHRIINILLTLAAAAALWFCFAGN 244 (496)
T ss_pred HhccCCHHHHHHHHHHHH-HHHHHHHHhCCCchhhhhhccccccchh-HHHHHhcchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 8999998754443 2223333445554332111100000000 000000000000000 00000
Q ss_pred cCCchh-------------HHHHh--hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHH
Q 013707 231 KIPSIR-------------DLICL--LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAG 295 (438)
Q Consensus 231 ~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 295 (438)
....+. ..... ..+.+.........+...........++|.|+++.+|+++.+.+.+.+...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~ 324 (496)
T PRK03893 245 LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGA 324 (496)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 000000 00000 000111111111111111222235678999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccc--hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhH
Q 013707 296 TISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 372 (438)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 372 (438)
+++. ++.++++||+++|+.+..+..+..+..+......+. +.... ..+.+.......+...+++++.+|+++||++
T Consensus 325 ~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 403 (496)
T PRK03893 325 AVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAG 403 (496)
T ss_pred HHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcc
Confidence 9988 888999999999998887776666555444333222 22222 2222222333345667788999999999999
Q ss_pred HHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 373 QGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 373 ~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
+|+.+....+|..+||.+.|.+.|.+
T Consensus 404 ~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 404 LGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred cchhhhhhhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999998863
No 55
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=8e-32 Score=256.51 Aligned_cols=342 Identities=11% Similarity=0.049 Sum_probs=248.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHH-HHHhhhhcchh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCEG 123 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~ 123 (438)
+++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..+++++++++++ ++.+++ .|+++|+ +.+
T Consensus 48 ~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~G~-~~~ 123 (455)
T TIGR00892 48 IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---VIELYLTAGFITGL-GLA 123 (455)
T ss_pred HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh-cch
Confidence 66777788899999999999999999999999999999999999999999999999988 777654 5789999 777
Q ss_pred hHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 013707 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (438)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~ 199 (438)
...+...+++.|+++ ++|+++.++.+.+..+|..++|.+++. .|||++|++.+++.++..+..++..|+.+.++.
T Consensus 124 ~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 202 (455)
T TIGR00892 124 FNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRV 202 (455)
T ss_pred hhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 666677788899986 789999999999999999988887765 489999999998876655444444333221111
Q ss_pred CCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCC
Q 013707 200 DDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (438)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (438)
.+.+.+ +..+ +.... ++...+...++..+..+ ++ ..++|.++......++..........++|.|.++ .|+
T Consensus 203 ~~~~~~---~~~~-~~~~~--~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~ 273 (455)
T TIGR00892 203 SKSKSK---EGLP-PDGST--KKLSKKSTAEKINRFLD-FS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGV 273 (455)
T ss_pred cccccc---ccCC-CCCcc--ccccccchhhhhhhhcc-hH-HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCC
Confidence 000000 0000 00000 00000000000001111 12 4466778877777777777777888899999987 699
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--chhhHHH--HHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHH
Q 013707 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLLS--LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (438)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 354 (438)
++.+.+.+.+..+++.++++ +..+++.||. ++++... .+.+..+++.++....++.+..+. .++.|++.+...+
T Consensus 274 s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~ 352 (455)
T TIGR00892 274 DEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGA 352 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHH
Confidence 99999999999999999888 7888999873 3333322 333444444445555556555444 6777888888889
Q ss_pred HHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcC
Q 013707 355 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 401 (438)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 401 (438)
...+.+.|.+|+++++++.|+++...++|+.+||.++|.+.|..+++
T Consensus 353 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 399 (455)
T TIGR00892 353 LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY 399 (455)
T ss_pred HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc
Confidence 99999999999999999999999999999999999999999875433
No 56
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.8e-31 Score=255.46 Aligned_cols=347 Identities=13% Similarity=0.068 Sum_probs=238.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
.+.+...+...+...++.....|.+|.+.+ +++++..+.|++.+.+.+++.+++++.|+++||+|||+++..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~ 106 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRD--------NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAF 106 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 344555556666666666677788887755 556777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH-
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR- 165 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~- 165 (438)
+.++.+++.++.+++++ ++.+++.|++.|+ +.+... ....+++|++|+++|++++++.....++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~s---~~~l~~~r~l~G~-~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~ 181 (476)
T PLN00028 107 LLMLTAPAVFCMSLVSS---ATGFIAVRFFIGF-SLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL 181 (476)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8889999999999 666543 45678999999999999999998766666666543332
Q ss_pred ------------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCC
Q 013707 166 ------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (438)
Q Consensus 166 ------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (438)
..+||+.|++.+++.++..+..++..++.|+.+ .+ + . .++. +. ++.
T Consensus 182 i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~-~~----~---~-----~~~~------~~---~~~ 239 (476)
T PLN00028 182 VFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN-YR----E---L-----KKSG------TM---PKD 239 (476)
T ss_pred HHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc-hh----h---H-----HhcC------cc---ccc
Confidence 138999999999887766555544433333211 00 0 0 0000 00 001
Q ss_pred chhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 013707 234 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (438)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (438)
+..+.++...+++..+...+..++..........+.|.|+.+.+|+++.+.+.+.+...++..+++ ++.|+++||+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r 318 (476)
T PLN00028 240 SFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARR 318 (476)
T ss_pred cHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHh
Confidence 111222333455666665555555555555667788999988889999999999999999999999 8889999999865
Q ss_pred -------hHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhh
Q 013707 314 -------KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANI 385 (438)
Q Consensus 314 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 385 (438)
........+.++..+.+...++.+.... +.+.+++.+...+...++..+.. ++++|++.|+.+....+|..
T Consensus 319 ~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~ 397 (476)
T PLN00028 319 FGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAV 397 (476)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHH
Confidence 2233333333333344444444333332 44555555555555666666654 47899999998776665555
Q ss_pred hhhHh
Q 013707 386 VSPLI 390 (438)
Q Consensus 386 ~g~~~ 390 (438)
++|.+
T Consensus 398 i~~~l 402 (476)
T PLN00028 398 LTQLL 402 (476)
T ss_pred HHHHH
Confidence 55544
No 57
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.5e-32 Score=265.00 Aligned_cols=364 Identities=17% Similarity=0.152 Sum_probs=258.4
Q ss_pred Cccchhh---HHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhh
Q 013707 43 LDECSLA---IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (438)
Q Consensus 43 ~~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (438)
.+|++++ ..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.+++++ ++.+++.|++.|+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~ 192 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGM 192 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHh
Confidence 4567777 788999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred cchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-hHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013707 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (438)
Q Consensus 120 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 198 (438)
+.+...+...+++.|++|+++|+++.++.+.+..+|.+++|.++..+ +||+.|++.+++.++..+. .+++||+|+..
T Consensus 193 -~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~-~~~~~esp~~l 270 (505)
T TIGR00898 193 -GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLL-SWFVPESPRWL 270 (505)
T ss_pred -hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHhcCCChHHH
Confidence 88888899999999999999999999999999999999999988765 7999999998887665544 47789988643
Q ss_pred CCCCCCccc---chhccccccCCCCCC------CCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHH
Q 013707 199 DDDDLTRPI---ITEETEGVNQNESNS------PVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASF 269 (438)
Q Consensus 199 ~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (438)
..+++.++. .++..+.+..+..++ ..++...+++.+.+ .++++|.++...+......+.........
T Consensus 271 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (505)
T TIGR00898 271 ISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFL----DLFRTPNLRKTTLCLMMLWFTTAFSYYGL 346 (505)
T ss_pred HHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHH----HHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211 111111111000000 00000001111222 35566666666555544444433333334
Q ss_pred HHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccc--hHHHH-HHHHH
Q 013707 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVPYA-TTAFS 346 (438)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 346 (438)
+.+..+ ++.+.... ....++..+++. ++.+++.||+|||+.+..+.++.+++++++.+.++. +.... ..+.+
T Consensus 347 ~~~~~~-~~~~~~~~---~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 421 (505)
T TIGR00898 347 VLDLGN-LGGNIYLD---LFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK 421 (505)
T ss_pred hccccc-cCCChHHH---HHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 444433 45554332 334455666666 778899999999999999998888888777766543 33333 44556
Q ss_pred hhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHH
Q 013707 347 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYE 426 (438)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (438)
++.....+..+.+..|.+|++.|+++.|+.+....+|++++|.+.+ +.+. ....++.+.+++.+++.+..
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~---------~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK---------WLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH---------HHhhHHHHHHHHHHHHHHHH
Confidence 6667777888999999999999999999999999999999999988 4332 12233444555555554544
Q ss_pred Hhhh
Q 013707 427 LLLS 430 (438)
Q Consensus 427 ~~~~ 430 (438)
..++
T Consensus 492 ~~lp 495 (505)
T TIGR00898 492 LFLP 495 (505)
T ss_pred HcCc
Confidence 4444
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.9e-32 Score=261.57 Aligned_cols=369 Identities=11% Similarity=0.051 Sum_probs=259.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHhhhhcch
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCE 122 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~ 122 (438)
|++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.++ .+ ++.+++.|+++|+ +.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~ 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGL-AQ 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHH-hc
Confidence 678899999999999999999999999999999999999999999998888877554 45 6789999999999 89
Q ss_pred hhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----hHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 013707 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (438)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 197 (438)
+...|....+++|++|+++|++++++...+..+|.+++|.+++.+ +||++|++.+++.++..+..+...||+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999999887653 899999999888776666555666666543
Q ss_pred CCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc
Q 013707 198 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (438)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
+++.++.+ .+..++ . .+++ +.+.+...++++ ..+++.++...+..+..........+++|.|+++.+
T Consensus 226 ~~~~~~~~--~~~i~~--~-~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~ 292 (465)
T TIGR00894 226 HPCISKFE--KKYINS--S-LQGQ----KGSTRQSLPIKA----IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVL 292 (465)
T ss_pred CCCCCHHH--HHHHHh--h-cccc----cCCCCCCCCHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32211100 000000 0 0000 000111123333 567788888888888888888888999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH--------HHHHHHHH--HHHHHHhHh-cccchHHHH-HHHH
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL--------LSLGLFAA--CINMFICSI-SWSAWVPYA-TTAF 345 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~--~~~~~~~~~-~~~~~~~~~-~~~~ 345 (438)
|.+..+.++..+...++..++. ++.|+++||+++|+. +..+.... .+..+.... ..+.+.... ..+.
T Consensus 293 g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (465)
T TIGR00894 293 RVSGKENGLLSSLPYLFAWLCS-IFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLA 371 (465)
T ss_pred CcChHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 9999999999999999999988 888999998764421 11111111 111111222 222222222 3333
Q ss_pred HhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHH
Q 013707 346 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTY 425 (438)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (438)
+.+.+...+.......+..| +.+|.+.|+.+....++..++|.+.|.+.+... . ......+.+.++..+++.+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--~---~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 372 NAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDS--K---NVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC--c---hHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555566666 589999999999999999999999998876411 0 01223455555556666555
Q ss_pred HHhhhhhhccCC
Q 013707 426 ELLLSFYVFSRW 437 (438)
Q Consensus 426 ~~~~~~~~~~~~ 437 (438)
.....+.+.++|
T Consensus 446 ~~~~~~~~~~~w 457 (465)
T TIGR00894 446 YLIFGSAERQDW 457 (465)
T ss_pred eeeeecceecCC
Confidence 555444444444
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=5.9e-31 Score=246.03 Aligned_cols=329 Identities=14% Similarity=0.168 Sum_probs=245.7
Q ss_pred HhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHh
Q 013707 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (438)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~ 100 (438)
.++.++..|.+|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+..+.+++...+.+
T Consensus 4 ~~~~~~~~p~~~~~~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAA--------DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred chHHHHHhccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3566788899999976 45677788999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHH
Q 013707 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAA 176 (438)
Q Consensus 101 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~ 176 (438)
+++ ++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+....+|..++|.+++. .+||+.|++.
T Consensus 76 ~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 76 AQT---IDQLIYMRFLHGL-AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred Hcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 998 8999999999999 8888888999999999999999999999999999999999988876 3899999998
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHH
Q 013707 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (438)
Q Consensus 177 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (438)
+.+.++..+...+.+||++++++++ +.+.++..++ .+...++|..+...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ--------------------------PFHLRTTIRN-FASLFRHKRVLGYMLASG 204 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC--------------------------CCChHHHHHH-HHHHHcChHHHHHHHHHH
Confidence 8887776666666777764322111 0000011122 222445566666555555
Q ss_pred HHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHh---Hhc
Q 013707 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC---SIS 333 (438)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 333 (438)
+..........+.|.+..+.+|+++.+.+.......++.+++. +..+++.||+|+|+.+..+.....+..+.. ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555556666677888888889999999999999999999988 888999999999998887776544332222 222
Q ss_pred c-cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHh-hhhhhhhhHh
Q 013707 334 W-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLI 390 (438)
Q Consensus 334 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~ 390 (438)
+ +.+.... ..+.+.+.+...+.......|..| +++|++.+..+... .++..+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 284 DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2232222 233344444455555666777666 89999999887664 3444444443
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=3.9e-31 Score=244.82 Aligned_cols=340 Identities=22% Similarity=0.299 Sum_probs=289.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHH
Q 013707 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (438)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (438)
.+....+...++.....+..|.+.++ .+.+..+.+++.+...++..+++++.|+++||+|||+.+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~ 74 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED--------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHH
Confidence 35566778888889999999998764 3556678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----
Q 013707 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (438)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~---- 167 (438)
.++.+...+.++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++.+++.+...++|..+||.+++.+
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 75 ALGSLLLAFASS---LWLLLVGRFLLGL-GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHc-ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 8999999999999 88888999999999999999999999999999999999999988764
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccch
Q 013707 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (438)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (438)
+||+.+++.+.+.++..+...+ .+ |.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------~~ 176 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLF-LL-----------------------------------------------------RL 176 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH-----------------------------------------------------HH
Confidence 6999999988877666544433 33 22
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh-HHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-LLSLGLFAACIN 326 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 326 (438)
++...+..++..........+.|.+.++.+|.++.+.+.......++..++. +..+++.||+++|+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5556666777777888888999999999889999999999999999999998 88889999999999 999999999999
Q ss_pred HHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCC
Q 013707 327 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (438)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~ 405 (438)
.+.....++.+.... ..+.+++.+...+...++..|..|+++|++..|+.+...+++..++|.+.|.+.|..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~------- 328 (352)
T cd06174 256 LLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG------- 328 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 888888777655555 677889999999999999999999999999999999999999999999999998742
Q ss_pred CCCchHHHHHHHHHHHHHHHH
Q 013707 406 NFPGFSIMCIGLASVRAFTYE 426 (438)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~ 426 (438)
.....+.+.+++.+++.+..
T Consensus 329 -~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 329 -GYGGVFLILAALALLAALLL 348 (352)
T ss_pred -CcchHHHHHHHHHHHHHHHh
Confidence 22334455555555554443
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=1.4e-30 Score=243.98 Aligned_cols=347 Identities=15% Similarity=0.112 Sum_probs=267.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+..++...++..+..++..|.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~--------~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~ 76 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQ--------AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLF 76 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 455667777788888899999999855 557778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh--
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-- 167 (438)
+.+++..+...+...++++.+++.|++.|+ +.+...+..+.++.+..|+++|++.+++.+...++|..+||.++..+
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTA-GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHh-hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998886554221228899999999999 88999999999999999999999999999999999999998876543
Q ss_pred ----------------------------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCC
Q 013707 168 ----------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 219 (438)
Q Consensus 168 ----------------------------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (438)
+||++|++.+.+.++..+... +.++++.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~------------------ 216 (410)
T TIGR00885 156 SNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA------------------ 216 (410)
T ss_pred cCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc------------------
Confidence 499999988887665433332 222221111000
Q ss_pred CCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc-CCChhHHHHHHHHHHHHHHHH
Q 013707 220 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAGLAGTIS 298 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~ 298 (438)
++ .+.++..+...|+|.++...+..+++...+....++++.|.++.. +.+....+...+.......++
T Consensus 217 ------~~-----~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vG 285 (410)
T TIGR00885 217 ------KQ-----ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFIS 285 (410)
T ss_pred ------cc-----ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 00 011111222456777777777888888788788889999987632 334444444555555667788
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhh
Q 013707 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 378 (438)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 378 (438)
+ ++.+++.||+++|+.+.++.....+..++..+.++....+...+.+++.+..+|..++...+..+++.+....++...
T Consensus 286 R-~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~ 364 (410)
T TIGR00885 286 R-FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA 364 (410)
T ss_pred H-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH
Confidence 8 888999999999999988888888888888777665555567788899999999999999999987766555555554
Q ss_pred HhhhhhhhhhHhHHHHHHHH
Q 013707 379 ISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 379 ~~~~g~~~g~~~~g~l~~~~ 398 (438)
. +|+++.|.+.|.+.|..
T Consensus 365 ~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 365 I--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred H--hccchHHHHHHHHHHHh
Confidence 4 99999999999999963
No 62
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=3.1e-30 Score=242.94 Aligned_cols=340 Identities=16% Similarity=0.093 Sum_probs=254.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.+........+..++.+++.|.+|.+.+ +++.+..+.|++.+++.++..++++++|+++||+|||+.+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~p~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 78 (401)
T PRK11043 7 FLVYLAGLSMLGFLATDMYLPAFKAIQA--------DLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGL 78 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHH--------HHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHH
Confidence 3344444566677788899999988865 45667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH--
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (438)
.+..++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|++++++..+.......+|..++|.+++.
T Consensus 79 ~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 154 (401)
T PRK11043 79 SLFALGSLGMLWVES---AAQLLVLRFVQAV-GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL 154 (401)
T ss_pred HHHHHHHHHHHHhcC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 8999999999999 7777777888999999999999999999888888888888888876
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcc
Q 013707 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (438)
Q Consensus 167 --~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (438)
.+||+.|++.+.+.++..+.. +.++|++++++++ + ..++ .+...+
T Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------------~---~~~~-~~~~~~ 201 (401)
T PRK11043 155 NHFGWQAIFATLFAITLLLILPT-LRLKPSKKARKQS----------------------------Q---DALT-FKQLLK 201 (401)
T ss_pred hcCChHHHHHHHHHHHHHHHHHH-HHcCCCCCccccc----------------------------h---HHHH-HHHHHc
Confidence 489999999888776654443 3455443211110 0 0011 222344
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++...+...+..........+.|.+.++ +|+++.+.+.......++..+++ +..+++.||+++|+..........
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~ 279 (401)
T PRK11043 202 SKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFA 279 (401)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHH
Confidence 5555544444444444555666778888876 79999999988887778888887 778899999998886655544444
Q ss_pred HHHHHh---Hh--cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 325 INMFIC---SI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 325 ~~~~~~---~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
++...+ .. .++.+.... ..+.+++.+...|...+...+..| +++|++.|+.+..+..+...++.+.|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 280 VSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 433222 22 122222222 456677788888888888777766 689999999999999999999999988866
No 63
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=9.4e-30 Score=243.90 Aligned_cols=375 Identities=13% Similarity=0.074 Sum_probs=266.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-----CcchH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAM 83 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~ 83 (438)
+...++...+.......+..+.+|.+.++ .+.+..++|.. +...... ++.+++|+++||+ ||||.
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~--------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTV--------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 35556666777888888999999999774 25555667775 3334443 5889999999999 99986
Q ss_pred -hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHh
Q 013707 84 -LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (438)
Q Consensus 84 -l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (438)
+..+.+..+++....++.+...+++.+.+.+++.|+ +.+...+...+++.|++|+|||+++.++...+..+|.++++.
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~-~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAF-CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 557777777777777776443348889999999999 788888999999999999999999999999999999999886
Q ss_pred hhHH-----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH
Q 013707 163 AARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (438)
Q Consensus 163 l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (438)
++.. .|||..|++.+++.++..+. .+..||++++++++ + +...+...++++
T Consensus 162 l~~~l~~~~~GWr~~f~i~a~l~ll~~l~-~~~~~e~~~~~~~~-------------------~----~~~~~~~~~l~~ 217 (491)
T PRK11010 162 LALWLADRYLGWQGMYWLMAALLIPCIIA-TLLAPEPTDTIPVP-------------------K----TLEQAVVAPLRD 217 (491)
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCccccccc-------------------c----chhhhHHHHHHH
Confidence 6554 48999999998876665443 34467754321110 0 000000012222
Q ss_pred HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA-GLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
+++++..+...+..++..........+.++|+.+.+|+++.+.+...... .++.+++. ++.|+++||+++|+.+
T Consensus 218 ----~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~~l 292 (491)
T PRK11010 218 ----FFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFRAL 292 (491)
T ss_pred ----HHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHH
Confidence 44455555555555666666666677888888777899999999987544 46777777 8999999999998877
Q ss_pred HHHHHHHHHHHHHh---Hhcc-cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhH
Q 013707 317 SLGLFAACINMFIC---SISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (438)
Q Consensus 317 ~~~~~~~~~~~~~~---~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 391 (438)
..+..+.++..+.+ .... +.+.... ..+..++.+...+...+...+..+++.+++..|+.+....+|..+++.+.
T Consensus 293 ~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~ 372 (491)
T PRK11010 293 MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVA 372 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665544443322 2322 2222222 34445555666677788889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 392 SPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 392 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
|.++|..+ ....|.+.+++.+.+.+.....++
T Consensus 373 G~l~~~~G--------~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 373 GWFVEAHG--------WPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHhC--------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999742 233556666666666666665554
No 64
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=6.7e-30 Score=236.83 Aligned_cols=365 Identities=14% Similarity=0.090 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|++....+..++.+....+..|+.+.+.+ .|++++..+.+++.+++.++..++.++.|++.||+|.|+++.+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~-------~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNK-------IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 367777778888888888888888877743 2678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-----ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh-
Q 013707 87 PLTLSIIPLAILAYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG- 160 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g- 160 (438)
+.++.++.++..+++ ++ ++.+++.|++.|+ + +...+.....+++++|+++||+++|+.....++|..++
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gi-g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGF-A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHH-H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 999999999999986 67 9999999999999 6 56778899999999999999999999976666666544
Q ss_pred ---HhhhH------------------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCC
Q 013707 161 ---TLAAR------------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 219 (438)
Q Consensus 161 ---~~l~~------------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (438)
|.+.+ ..+||..+++..++.++..++.++..+|.++. +
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~--~------------------- 239 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS--R------------------- 239 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc--c-------------------
Confidence 43221 22478777787777666666666665543321 1
Q ss_pred CCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHH
Q 013707 220 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (438)
.+.++..+ ..|+|..|...+..++....+.++..++|.|.++.+ +............+...+.+
T Consensus 240 -------------~~~~~~~~-vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r 303 (462)
T PRK15034 240 -------------ASIADQLP-VLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR 303 (462)
T ss_pred -------------cCHHHHHH-HhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH
Confidence 12344343 456777888888888888888888889999998865 33333323334456677777
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHh-cc-----cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCC------
Q 013707 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSI-SW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP------ 366 (438)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------ 366 (438)
+++|+++||+|+++++..+.+...+....... .+ +.+.... .....++.+..+...+-++.+.+|+
T Consensus 304 -plgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~ 382 (462)
T PRK15034 304 -SVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRV 382 (462)
T ss_pred -HhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcc
Confidence 88899999999999998888777666533222 22 1222222 2333455566666666666666663
Q ss_pred ---------------CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 013707 367 ---------------NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 367 ---------------~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (438)
++.|.+.|+......+|+.+-|.+.|...+.++++ ...+....+..+++....+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~-------~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 383 KMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSP-------VGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred cccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCc-------HHHHHHHHHHHHHHHHHHHH
Confidence 15789999999999999999999999998876432 22334444445555555443
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=2.3e-30 Score=243.56 Aligned_cols=350 Identities=13% Similarity=0.059 Sum_probs=247.6
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHH
Q 013707 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (438)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~ 97 (438)
+++.++.....+..+.+.++...+ .+|............+...++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPP-SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 345566666666666666554221 1122222222222334455666689999999999999999999999999999999
Q ss_pred HHhcccchh-----HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH------
Q 013707 98 LAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------ 166 (438)
Q Consensus 98 ~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~------ 166 (438)
++++++... ...+++.|+++|+ +.+...+...+++.|+.|+++|++..+..+.+..+|.++++.++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGF-SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHh-hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999988321 1258899999999 8888888999999999999999999999999999999998876532
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH
Q 013707 167 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (438)
Q Consensus 167 ------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (438)
.+||++|++.+++.++. .......||+++.+++++ ++++...+.++.
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~-- 213 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFEKAQE------------------------KHKKKRGPIRET-- 213 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHHHHh------------------------ccccccCCHHHH--
Confidence 47999999877665443 333345565543221110 000011122332
Q ss_pred hhccc-chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 241 LLRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
++++ +.++......++..........+.|.|.++.+|.++.+.+.......+...++. ++.++++||+++|+.+..+
T Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 214 -LTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred -HHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHH
Confidence 2222 235555566666666777778899999988889999999999988889998888 8889999999999877655
Q ss_pred HHHHHHHH-H-HhHhc--ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHH-hhHhhhhhhhhhHhHHH
Q 013707 320 LFAACINM-F-ICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFSP 393 (438)
Q Consensus 320 ~~~~~~~~-~-~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~g~~~~g~ 393 (438)
..+..+.. . ..... ++.+.... ..+.+++.+...+...+.+.|.+|+++|+++.++. +....+|..++|.+.|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 292 TVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 44433322 2 22222 23333333 45667777788888999999999999999999985 45567888999999999
Q ss_pred HHHHH
Q 013707 394 LTALF 398 (438)
Q Consensus 394 l~~~~ 398 (438)
+.|+.
T Consensus 372 l~~~~ 376 (394)
T TIGR00883 372 LVAMT 376 (394)
T ss_pred HHHHc
Confidence 99974
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.8e-30 Score=240.49 Aligned_cols=331 Identities=13% Similarity=0.056 Sum_probs=252.3
Q ss_pred hhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc
Q 013707 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (438)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (438)
.......|.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+
T Consensus 14 ~~~~~~~~~lp~l~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~ 84 (355)
T TIGR00896 14 PALTSVGPLLPQIRS--------ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA 84 (355)
T ss_pred CccccCcccHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence 344667889998865 557778899999999999999999999999999999999999998888887776 66
Q ss_pred ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh------hHHHHHHH
Q 013707 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQA 175 (438)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~------~w~~~f~~ 175 (438)
++ .+.+++.|++.|+ +.+...+....++.|++| ++|+++++..+...++|..+++.+++.+ +||..|..
T Consensus 85 ~~---~~~l~~~~~~~g~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~ 159 (355)
T TIGR00896 85 PG---TALLFAGTALIGV-GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAW 159 (355)
T ss_pred cc---HHHHHHHHHHHHH-HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 77 8888999999999 778877788888899886 6899999999999999998888776553 38988887
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHH
Q 013707 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (438)
Q Consensus 176 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (438)
.+...++.. ...+||.++++++++ +. .....++ ..|+|.++...+..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~~~-----------------------~~---~~~~~~~----~~~~~~~~~~~~~~ 206 (355)
T TIGR00896 160 WALPALLAL---LAWIPQVRRRVAANQ-----------------------TT---TRLTPVR----IWRSPLAWQVTVFF 206 (355)
T ss_pred HHHHHHHHH---HHHhhhhccccCCCC-----------------------CC---CCCCCch----hhcCHhHHHHHHHH
Confidence 765543322 223454432211100 00 0001112 34456666666666
Q ss_pred HHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHhHhcc
Q 013707 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAACINMFICSISW 334 (438)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 334 (438)
++....+.....++|.|+++ .|+++.+.+...+...++.++++ +..+++.||+ ++|+.+..+..+..++.+.+.+.+
T Consensus 207 ~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 207 GLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 66666777778899999987 69999999999999999999998 8889999999 456667777777777777666655
Q ss_pred cchHHHHHHHHHhhhhhhHHHHHHHHhhcCC-CCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcC
Q 013707 335 SAWVPYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 401 (438)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 401 (438)
+........+.+++.+...|...+.+.+..+ ++++++..++.+....++..++|.+.|.+.|+.+++
T Consensus 285 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 285 MHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred hhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4433334567788888888887777665554 567789999999999999999999999999986543
No 67
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=2.8e-30 Score=244.55 Aligned_cols=358 Identities=11% Similarity=0.022 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++..+.+.+..++..++.+...|.+|.+.++ +++.+..+.|++.+.+.++..++++++|+++||+|||+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-------INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 4566777778888888889999999999874 467788899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHH---hcccc--hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhH
Q 013707 87 PLTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (438)
+..+.++...... .++.. ..+...++.++..|. +.....+....+..+. ++++++.+|..+...++|..+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~ 158 (420)
T PRK09528 82 IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF-GFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCA 158 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHH
Confidence 7666554433221 11110 001112233333343 2222223333333222 24567788888888999999999
Q ss_pred hhhHHh---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHH
Q 013707 162 LAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (438)
Q Consensus 162 ~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (438)
.+++.+ +|+.+|++.+++.++..+..++..||++++.+.+ + + ++. .+++.+.++.
T Consensus 159 ~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~-~~~------~~~~~~~~~~ 216 (420)
T PRK09528 159 FIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-N--------------A-LGA------NASAVSLKDA 216 (420)
T ss_pred HHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-c--------------c-hhc------ccccccHHHH
Confidence 998875 7999999988777666555444444432221110 0 0 000 0011123333
Q ss_pred HHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q 013707 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (438)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (438)
.+ ..|+|.++...+..+.............|.|+.+.+ +.+..+.|.+.+...+...++. +..+++.||+++|+.
T Consensus 217 ~~-~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 217 LA-LLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNA 294 (420)
T ss_pred HH-HccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchh
Confidence 33 445666665555444444444555556777776543 5666778898888888888887 888999999999999
Q ss_pred HHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHH-HhhHhhhhhhhhhHhHHH
Q 013707 316 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSP 393 (438)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~g~~~~g~ 393 (438)
+..+..+.+++.++..+.++.+..+. ..+.+.+.+...+....++.+..|++.+++..+. ++....+|.+++|.+.|+
T Consensus 295 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~ 374 (420)
T PRK09528 295 LLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGN 374 (420)
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHH
Confidence 99988888888888888777776555 4566777777777777888999999999988766 677889999999999999
Q ss_pred HHHHH
Q 013707 394 LTALF 398 (438)
Q Consensus 394 l~~~~ 398 (438)
+.|..
T Consensus 375 l~~~~ 379 (420)
T PRK09528 375 LYDSI 379 (420)
T ss_pred HHHhh
Confidence 99974
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=1e-29 Score=237.47 Aligned_cols=335 Identities=12% Similarity=-0.001 Sum_probs=252.9
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcc----hHhHHHHHHH
Q 013707 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----AMLTLPLTLS 91 (438)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk----~~l~~~~~~~ 91 (438)
..+...++.++..|.+|.+.+ |.+.+..+.|++.+++.++..++++++|+++||+||| +.+.+.....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~--------~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 83 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK--------GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF 83 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH--------hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 355556778999999999986 4467778999999999999999999999999999994 3333222221
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----h
Q 013707 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----L 167 (438)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~ 167 (438)
........++ ++.+++.|++.|+ +.+...|...+++.|+ +++|+++++..+...++|..+||.++++ +
T Consensus 84 --~~~~~~~~~~---~~~l~i~~~l~g~-~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~ 155 (382)
T PRK11128 84 --AVAFWFGAHS---FWLLFVAIGLFNL-FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF 155 (382)
T ss_pred --HHHHHHhccc---HHHHHHHHHHHHH-HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2222334567 8899999999999 7777888888888887 4567888888888889999999999886 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccch
Q 013707 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (438)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (438)
|||..|++.++..++.. +..+..||++++++++ + +.++..+++ +.++|+|.
T Consensus 156 g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------------~----~~~~~~~~~----~~i~~~~~ 206 (382)
T PRK11128 156 GEQAILWILTAGVASML-LGQLLRPTIMPQGESR--------------------Q----QESAGWPAW----KALLKEPT 206 (382)
T ss_pred ChhHHHHHHHHHHHHHH-HHHHccCCCCCccccc--------------------c----ccccccchH----HHHHcChh
Confidence 89999998876544332 2333344432211110 0 000001122 33667788
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
++...+..++..........+.|.|.+| .|.++.+.|.+.+...+..++.. ...+++.||+++++.+..+....+++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8877777777777777788888999976 79999999999998888777777 788899999999999999999888888
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHh-hHhhhhhhhhhHhHHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~ 398 (438)
+.....++.+..+. .++.+++.+...+....+..+. +++++++..+..+ ....+|..+||.++|.++|.+
T Consensus 285 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 285 GLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88877777776655 6777888888888888888876 5677899999887 445777899999999999974
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.6e-30 Score=273.69 Aligned_cols=359 Identities=11% Similarity=0.070 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++.+..++...++..++.++....++.+....+ ..+....+....++..+++.+++.+++++.|+++||+|||+++..
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGL--SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 345566777788887776655444333322111 111112233567899999999999999999999999999998643
Q ss_pred ---HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 87 ---PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
..+...+........++ ++.++++|+++|+ +.+...|+..+++.|++|+++|++++|+.+++.++|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi-~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 88 LKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGI-HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22222222333334467 8999999999999 8899999999999999999999999999999999999999999
Q ss_pred hHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
++++ +|++.|....+.. +..++..+.+|++++...... ...+......+.+
T Consensus 164 ~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 218 (1140)
T PRK06814 164 GGLATISGNFVILVALLMGIA-VLGWLASLFIPKTGNAAPDLK------------------------IDRNIIRSTITLL 218 (1140)
T ss_pred HHHHHhccccHHHHHHHHHHH-HHHHHHHhhCCCCCCCCCCCe------------------------eccchHHHHHHHH
Confidence 9885 8998885444443 334445566776543222110 0000001233445
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (438)
+.++++|.++...+..++..+.......++|.|+++.+|.++.+.|.+.+..+++.++++ +..+++.|+..+++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 219 KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHH
Confidence 667788889888888888877778888899999999999999999999999999999998 8888999887766655555
Q ss_pred HHHHHHHHHHhHhc--------------------ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhh
Q 013707 320 LFAACINMFICSIS--------------------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 378 (438)
Q Consensus 320 ~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 378 (438)
.++.+++.+.+.+. .+.+...+ .+++|++.+...+...+++++.+|++++|+++|..++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~ 377 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNV 377 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHH
Confidence 55554444433332 34444444 5677888888888999999999999999999999999
Q ss_pred HhhhhhhhhhHhHHHHHHH
Q 013707 379 ISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 379 ~~~~g~~~g~~~~g~l~~~ 397 (438)
...++..+++.+.|.+.+.
T Consensus 378 ~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.6e-30 Score=242.09 Aligned_cols=342 Identities=18% Similarity=0.172 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
++..++..++...+.....|..|.+.++ +++.+..+.|++.+.+.++..+++++.|+++||+|||+.+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 75 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKD-------DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLL 75 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHH-------HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 4556777777888888889999964432 567778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc-cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH--
Q 013707 90 LSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (438)
+..++.+++++++ + ++.+++.|+++|+ +.+.. +...+++.|++|+++|++++++.....++|..+++.++..
T Consensus 76 ~~~i~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 76 LLAIPCLWAGLAVQS---YSVLLLLRLFIGI-AGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHHhhh---HHHHHHHHHHHHH-hchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999998 8 8999999999999 65544 5678999999999999999999987777776666555432
Q ss_pred ------------hhHHHHH-HHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCC
Q 013707 167 ------------LSTTSAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (438)
Q Consensus 167 ------------~~w~~~f-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (438)
.+||+.| +..+++..+..++.....+|++++++++++.+ .++++ . . .+.+
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--~--~--~~~~ 213 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLS-----------FKGAR--W--S--VGTG 213 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcc-----------ccccc--c--c--ccch
Confidence 2699999 44455544444555555666554322110000 00000 0 0 0001
Q ss_pred chhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 013707 234 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (438)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (438)
..++..+ ..++|.++...+..++..........+.|.|+++.+|+++.+.+.+.....+..+++. ++.+++.||+++|
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~ 291 (366)
T TIGR00886 214 ALGDQLK-VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGGA 291 (366)
T ss_pred hHHHHHH-HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhccc
Confidence 1122222 3345566666666666666667788899999999899999999988888888888888 8889999999998
Q ss_pred hHHHHHHHHHHHHHHHhHhcc----cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhh
Q 013707 314 KLLSLGLFAACINMFICSISW----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (438)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (438)
+....+......+...+.+.. +.+.... ..+..+..+...+...+...+..| +++|++.|+.+...++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 292 RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 877777666666555544322 2222222 344455566666667777788776 79999999999988765
No 71
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-31 Score=246.87 Aligned_cols=365 Identities=14% Similarity=0.099 Sum_probs=279.1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcch
Q 013707 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (438)
Q Consensus 43 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (438)
.++++.+..+.|++.+.++.|+++++.+.|+++||+|-|+++..+.++.++++++.+.+.+.+ ++.+++.|++||+ +.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl-~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGL-GQ 142 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHhHH-HH
Confidence 347888999999999999999999999999999999999999999999999999999987655 4588999999999 99
Q ss_pred hhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH-----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 013707 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (438)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 197 (438)
|...|+...+.++|.|++||++..++..++..+|.+++-+++++ +||+.+|++.+.++++..++..++..|+|++
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999998777776 4999999999999998887777778877766
Q ss_pred CCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc
Q 013707 198 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (438)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
++.-.+ +..+..++... .++.+++...|+++ +.+++.+|...+..+........+..+.|.|+++++
T Consensus 223 h~~is~--~El~~I~~~k~-------~~~~~~~~~vP~~~----i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL 289 (466)
T KOG2532|consen 223 HPNISE--KELKYIEKGKS-------EAHVKKKPPVPYKA----ILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL 289 (466)
T ss_pred CCCCCH--HHHHHHHhccc-------ccccCCCCCCCHHH----HHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 433200 00000000000 00011113346665 667889999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch---------hhHHHHHHHHHHHHHHHhHhcccchH--HHHHHHHH
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------AKLLSLGLFAACINMFICSISWSAWV--PYATTAFS 346 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 346 (438)
|+|..+.|++.++..+...+.. ++.|.++||+.+ |..-.++....++.++.+++.++... ........
T Consensus 290 ~f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 290 GFDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIA 368 (466)
T ss_pred CCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHH
Confidence 9999999999999999999998 888999998754 33445667777777877777764333 22222232
Q ss_pred hh-hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHH
Q 013707 347 VL-VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTY 425 (438)
Q Consensus 347 ~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (438)
.+ .+...+..+.-..+. .+++.+..+|+.+....+.+.++|.+.|.+... + ... --...|++.+++.+++.++
T Consensus 369 ~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~--~--t~~-eW~~VF~i~a~i~~~~~i~ 442 (466)
T KOG2532|consen 369 IGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTD--N--TRE-EWRIVFLIAAGILIVGNII 442 (466)
T ss_pred HHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC--C--CHH-HHHHHHHHHHHHHHHhchh
Confidence 22 333333333333433 459999999999999999999999999998841 1 000 1123556666666666554
Q ss_pred HHhh
Q 013707 426 ELLL 429 (438)
Q Consensus 426 ~~~~ 429 (438)
....
T Consensus 443 f~~f 446 (466)
T KOG2532|consen 443 FLFF 446 (466)
T ss_pred eeEe
Confidence 4433
No 72
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=229.67 Aligned_cols=337 Identities=18% Similarity=0.284 Sum_probs=248.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 124 (438)
+.+.+....|++.+.+.+.+.+.++.+|.++||+|||+++..++...++...+.++++| +..+.++|++.|+ ..|.
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---F~afv~aR~l~Gi-~kgn 137 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---FAAFVLARFLGGI-FKGN 137 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhh-ccCc
Confidence 33456788999999999999999999999999999999999999999999999999999 8677777999999 7676
Q ss_pred HhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHhhH------HHHHHHHH----HHHHHHHHHHHHhcccC
Q 013707 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST------TSAFQAAT----IVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w------~~~f~~~~----~~~~i~~~~~~~~~~~~ 194 (438)
. ....++++|+.++|+|+.+++.++.++++|.++||.+|+++.- +.+|.... ++.........+++||+
T Consensus 138 l-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 L-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred h-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6 4799999999999999999999999999999999999999743 22333322 22222123445689998
Q ss_pred CCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccc------hhHHHHHHHHHHHhhhchhhHH
Q 013707 195 VPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV------TLSQAAVVAFFSGLSEGGMQAS 268 (438)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 268 (438)
-+.++++++.....+..+++.+-. +. +.......++++| ......+..+++...+......
T Consensus 217 L~~rk~~~~~~~~~~~~~~~~~~~-------~~------~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t 283 (451)
T KOG2615|consen 217 LPLRKRNDEHSTLQEAADDRLALL-------KF------ARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENT 283 (451)
T ss_pred ccchhhcccccchhhhhhhhhhhc-------ch------hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 665544411111111111110000 00 0000001111111 1223444555665566666666
Q ss_pred HHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHH
Q 013707 269 FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAWVPYA-TTAF 345 (438)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 345 (438)
.+.+..+.+|+++.+.|.+++..++.+.+.+..+ .+..+|.+ .+..+..+..++.-.++++.....+..++. ..+.
T Consensus 284 ~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~-~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 284 VLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLAL-VPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLK 362 (451)
T ss_pred HHHhhcCccCCChhhheeeeehhhHHHHHHHHhc-cccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHH
Confidence 6666677799999999999999999999988444 45556655 455666777777777777777777776666 6778
Q ss_pred HhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 346 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
.+......+....++.+..|+++||+++|+..+...++.++||.+.|.+..+...
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~ 417 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQG 417 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecC
Confidence 8888888999999999999999999999999999999999999999999887543
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.1e-30 Score=270.58 Aligned_cols=358 Identities=15% Similarity=0.124 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
.+.+..+++..++..++.......+..+..... +.+.+....+++.+++.++..++++++|+++||+|||++++.
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~ 82 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY-----DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRI 82 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc-----CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHH
Confidence 455666677777766655444333333333221 223344667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh---cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 87 PLTLSIIPLAILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
+.++..+..++..+ +++ ++.+++.|+++|+ +.+...++..+++.|++|+++|++++++.+.+.++|.++||.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l 158 (1146)
T PRK08633 83 VKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGA-QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTAL 158 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 88776666555443 456 8999999999999 8899999999999999999999999999999999999999999
Q ss_pred hHHhh-------------HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccc
Q 013707 164 ARFLS-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230 (438)
Q Consensus 164 ~~~~~-------------w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (438)
++++. |++.+.+..+...+..++..+.+||.++....+. + +....
T Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~----~~~~~ 216 (1146)
T PRK08633 159 FSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF------------------D----KKKYL 216 (1146)
T ss_pred HHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc------------------c----ccccc
Confidence 88752 2333333333333333344455677654322210 0 00000
Q ss_pred cCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChh-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013707 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAPI 309 (438)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (438)
.....++.++.+++++.++..++..++..........++|.|+++.+|++.. +.+++.+...++.++++ ++.+++.||
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~r 295 (1146)
T PRK08633 217 FPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSGR 295 (1146)
T ss_pred cHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhCC
Confidence 0112233455567788787777777776666677788899999998999998 89999999999988988 888999999
Q ss_pred hchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhh
Q 013707 310 LGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (438)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 388 (438)
+++++.+.++.++.+++.+.+.+..+.+...+ .++.+++.+...+...+++.+..|++.||+++|+.+.+..++..+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 296 HIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred ceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 99988888888888888877777666555444 57778888888888999999999999999999999999999998888
Q ss_pred HhHHHHHH
Q 013707 389 LIFSPLTA 396 (438)
Q Consensus 389 ~~~g~l~~ 396 (438)
.+++.+..
T Consensus 376 ~~~~~l~~ 383 (1146)
T PRK08633 376 ALTTLFSG 383 (1146)
T ss_pred HHHHHHHH
Confidence 77665544
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=1e-28 Score=232.34 Aligned_cols=369 Identities=12% Similarity=0.061 Sum_probs=256.1
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-----Ccch-HhHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA-MLTLP 87 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~-~l~~~ 87 (438)
+...+...+..+...+.+|.+.++ .+.+..++|++..+... .+..+++|+++||+ |||| .+..+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~--------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~ 74 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV--------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLT 74 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHH
Confidence 334556677888899999999884 47778899998777665 68999999999999 8876 67888
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH-
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (438)
.++.+++.....+.++..+++.+++..++.+. ..+...++..+++.|+.|+|||+++.++...+.++|.++|+.++..
T Consensus 75 ~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 75 QVGLAASIAAMAFCPPHAALWPLAGLAVLVAF-LSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHHHHHHHHhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 88888888887887543337778888888887 7788889999999999999999999999999999999998876654
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
.|||..|++.+++.++..+ ..+..||+++++++++ + ..++.++.++.+
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~~------------------------~---~~~~~~~~~~~l 205 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGAL-TTLWAPEPEVPARPPR------------------------S---LGEAVVGPLRDF 205 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHH-HHHhcCCCcccccccc------------------------h---hHHHHHHHHHHH
Confidence 3899999998887655443 3456676543221110 0 000122334446
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
+++|.++..++..++..........+.+.++.+.+|+++.+.+.+....+. +.+++. ++.+++.||+++|+.+..+..
T Consensus 206 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~~ 284 (402)
T PRK11902 206 FSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFGV 284 (402)
T ss_pred HhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 778878777666666555444444455666777789999999998866655 466666 888999999999888777666
Q ss_pred HHHHHHHHh---Hhcc-cchHHHH-HHHHHhh----hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 322 AACINMFIC---SISW-SAWVPYA-TTAFSVL----VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 322 ~~~~~~~~~---~~~~-~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
+..+..+.+ ...+ +.+.... ..+..+. .+...+....++++..| ++..+..+....++...++.++|
T Consensus 285 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 285 LQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASVGRVYVGPTSG 360 (402)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 655544333 3333 3343333 2232333 34444444455555544 45556666677788877778999
Q ss_pred HHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 013707 393 PLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFYVF 434 (438)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
.++|..+ ....+...+++.+++....++.+++.+
T Consensus 361 ~l~~~~G--------~~~~f~~~~~~~~~~~~~~~~~~~~~~ 394 (402)
T PRK11902 361 YLVEAYG--------WPGFYLMTVVIALPGLALLWLMRGTIG 394 (402)
T ss_pred HHHHHhC--------hHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999842 344556666666666666666666543
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=2.9e-29 Score=236.18 Aligned_cols=371 Identities=12% Similarity=0.073 Sum_probs=261.6
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCc-chHhHHHHHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTLS 91 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~l~~~~~~~ 91 (438)
+.+..++.+..+++..|.++.+..+ +.+.+..+.|++.+++.++..++++++|+++||+|| |+++.++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSK-------TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 5667778888999999999888864 457778899999999999999999999999999965 77888888888
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhh--------ccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVA--------DNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
++...+..+.++ ++.+++.|++.|+ +.+...+...++.. |..+...|.+..| .+|.++||.+
T Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l 149 (418)
T TIGR00889 80 ALLLFFAAQVTT---PAGMFPVLLANSL-AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWA 149 (418)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHH
Confidence 888888888888 8888999999998 66666666555432 3333344555555 3677778877
Q ss_pred hHHhhH---HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH
Q 013707 164 ARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (438)
Q Consensus 164 ~~~~~w---~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (438)
++.++. +.+|++.+++.++..+ ..+.+||+++.+++++ ++. ++ ..+...+
T Consensus 150 ~g~l~~~~~~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~-----------------------~~~-~~--~~~~~~~ 202 (418)
T TIGR00889 150 VSLLDIELSNIQLYITAGSSALLGV-FALTLPDIPVAKSTAK-----------------------MSI-KV--MLGLDAF 202 (418)
T ss_pred HHHhcccchhHHHHHHHHHHHHHHH-HHhcCCCCCCCccccc-----------------------cCH-HH--HhhhhHH
Confidence 776532 2356676666555544 3456787643221110 000 00 0000112
Q ss_pred hhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCCh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 013707 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--------NQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (438)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (438)
...|+|.++...+..++..........+.+.|.++ .|.++ .+.+...+...+..+++. +..+++.||+|+
T Consensus 203 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g~ 280 (418)
T TIGR00889 203 ILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFGI 280 (418)
T ss_pred HHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhCc
Confidence 25566777777777777666666667778888876 45443 566888888888888888 888999999999
Q ss_pred hhHHHHHHHHHHHHHHHhHhccc-c---hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHh-hHhhhhhhh
Q 013707 313 AKLLSLGLFAACINMFICSISWS-A---WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIV 386 (438)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~ 386 (438)
|+++..+.++..++...+....+ . +..++ .++.+++.+...+....++.|.+|+++||+++|+.+ ....+|..+
T Consensus 281 r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 281 KKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999988888766665432 2 22233 566777778888888899999999999999999997 567899999
Q ss_pred hhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 387 SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 387 g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
||.+.|.++|+.+++... .....+.+.+++.+++.+...+..+
T Consensus 361 Gp~l~G~l~~~~g~~~~~--~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGTF--DWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHhccccCC--chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999985432110 1122344444444444444444433
No 76
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.2e-29 Score=230.98 Aligned_cols=379 Identities=17% Similarity=0.172 Sum_probs=272.6
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchh
Q 013707 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (438)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 123 (438)
++.+.+ ...+.+.+++.+|.++|+...|.++||+|||..+.++.++..++.++..++...+.+..++++|++.|+ ..+
T Consensus 54 s~~~~~-~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl-~~g 131 (485)
T KOG0569|consen 54 SDSTLD-LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGL-ACG 131 (485)
T ss_pred ChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HhH
Confidence 343343 456889999999999999999999999999999999999988888888877555559999999999999 889
Q ss_pred hHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 013707 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (438)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 197 (438)
........++.|..|++.||......+.+..+|.++|..++.- -.|++.+....+++++. +....++||+|+.
T Consensus 132 l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 132 LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPKY 210 (485)
T ss_pred HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcch
Confidence 9999999999999999999999999999999999998655532 36999998888886555 5556789999984
Q ss_pred ----CCCCCCCcccchhccccccCCCCC------CCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHh-hhchhh
Q 013707 198 ----DDDDDLTRPIITEETEGVNQNESN------SPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGL-SEGGMQ 266 (438)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 266 (438)
++++++++++.+..+.+...+++. .+.++.++++..++++.++.-..++.+...+...+...+ +.....
T Consensus 211 Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~ 290 (485)
T KOG0569|consen 211 LLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIF 290 (485)
T ss_pred HHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeH
Confidence 344444444544443332211110 011111112333555533322112222233333333333 333444
Q ss_pred HHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc-----c-chHHH
Q 013707 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-----S-AWVPY 340 (438)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~ 340 (438)
.+....+++ .|+++.++-+.....+....+.+ +++.++.||.|||++++.+..++.+..+++.... . .|..+
T Consensus 291 ~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y 368 (485)
T KOG0569|consen 291 FYSTSIFKT-AGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSY 368 (485)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 555555555 69999999999999999999998 8999999999999999999998888877766532 1 23332
Q ss_pred H----HHHHHhhhh-hhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHH
Q 013707 341 A----TTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCI 415 (438)
Q Consensus 341 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 415 (438)
. .+++.+..+ ...|..+-+.+|.+|++.|..+.+.....+.+.+.+-...+..+.+.. ..+.++..
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~---------g~~~filF 439 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI---------GPYVFILF 439 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cchhhHHH
Confidence 2 223333333 336888899999999999999999999999999999999988888873 33556666
Q ss_pred HHHHHHHHHHHHhhhhhhccC
Q 013707 416 GLASVRAFTYELLLSFYVFSR 436 (438)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~ 436 (438)
.+.+.+..+..++..|+.+.|
T Consensus 440 ~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHhCcccCCC
Confidence 677777777777766665543
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.98 E-value=4.7e-29 Score=234.35 Aligned_cols=357 Identities=11% Similarity=0.041 Sum_probs=254.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|.++.+....++...+.+...|.+|.+..+ +.+.+..+.|++.+.+.++..+++++.|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-------VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 456667777888889999999999999864 4567778899999999999999999999999999999999887
Q ss_pred HHHHHHHHHHH---Hhcccc--hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHh
Q 013707 88 LTLSIIPLAIL---AYRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (438)
Q Consensus 88 ~~~~~~~~~~~---~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (438)
....+++.... .+.+.. .......+.+++.|+ +.+...+...++..|..+ +++..++......++|.++||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGF-VFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 76665544322 222210 113445677888888 777777778888777543 3445677788888899999999
Q ss_pred hhHHh---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 163 AARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 163 l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
+++.+ +||.+|++.+.+.++..+..+...||++++++.+ + . .+ .++ +.++.++.
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~-~~---~~~---~~~~~~~~- 208 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-N--------------A-LG---ANA---SAFSLKLA- 208 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-c--------------c-cc---ccc---CCCCHHHH-
Confidence 98864 8999999998887766555444444433221110 0 0 00 000 01112332
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
+...|+|.++...+..+...........+.+.|+++.+ +.+..+.|...+...+...++. ...+++.||+++|+.+
T Consensus 209 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l 287 (396)
T TIGR00882 209 LELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNAL 287 (396)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhH
Confidence 23445666666655555555555556667788887765 4566677888888888888887 7788999999999999
Q ss_pred HHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHH-HhhHhhhhhhhhhHhHHHH
Q 013707 317 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~g~~~~g~l 394 (438)
..+..+.++........++.+..+. ..+.+++..........+..+..|++.+++..+. .+....+|+.++|.+.|++
T Consensus 288 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l 367 (396)
T TIGR00882 288 LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM 367 (396)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH
Confidence 9998888888877777767665554 4556666555555555667777888888887776 6788999999999999999
Q ss_pred HHHH
Q 013707 395 TALF 398 (438)
Q Consensus 395 ~~~~ 398 (438)
.|..
T Consensus 368 ~~~~ 371 (396)
T TIGR00882 368 YDSI 371 (396)
T ss_pred HHhc
Confidence 9974
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=2.8e-29 Score=232.66 Aligned_cols=318 Identities=15% Similarity=0.074 Sum_probs=238.6
Q ss_pred hhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-----CcchHh-HHHHHHHHHHHHH
Q 013707 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAML-TLPLTLSIIPLAI 97 (438)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~l-~~~~~~~~~~~~~ 97 (438)
.+...+.+|.+.+ |.+++..+.|+..+. .+...+ .+++|+++||+ ||||.+ +.+.+..++....
T Consensus 4 ~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 4 LGLVGNTLPYWLR--------SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred chhHHhHHHHHHH--------HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4566778888866 557777888988655 555554 89999999998 898974 5677777777777
Q ss_pred HHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hh-----
Q 013707 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LS----- 168 (438)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~----- 168 (438)
.++.++...++.+....++.+. +.+...++..+++.|++|+|+|+++.++...+.++|.++++.+++. ++
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAF-FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 7777554447777888888888 7788889999999999999999999999999999999999988865 46
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhccc
Q 013707 169 ---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (438)
Q Consensus 169 ---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (438)
||.+|++.++..++..+..++..||++++++++ ++ +..+.++.++.++++
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~------------------------~~---~~~~~~~~~~~~~~~ 205 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP------------------------KP---LTQAVLKPIREFFQR 205 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc------------------------hh---HHHHHHHHHHHHHHh
Confidence 999999998877665544444456643211100 00 001122233345555
Q ss_pred ch---hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 246 VT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 246 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
|. ++...+..++..........+.|.|+++ +|+++.+.+.+....+. ..+++. ++.+++.||+|+|+.+..+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 206 KNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHH
Confidence 54 6666666666777778888999999988 89999999988887774 455666 888999999999998888888
Q ss_pred HHHHHHHHhHhc-----------ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhh
Q 013707 322 AACINMFICSIS-----------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 381 (438)
Q Consensus 322 ~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 381 (438)
+.+++...+.+. ++.+.... .++.+++.+...+...++.+|.+|+++||+.+|+.++..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 777766655442 12233333 4566888899999999999999999999999999887764
No 79
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.7e-31 Score=233.19 Aligned_cols=365 Identities=14% Similarity=0.162 Sum_probs=262.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHh
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (438)
...+.+..+++...+..++.+.+..+.+... +.++++....|++++.+.+.+.+++|+.|.++|||+||+++
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~--------~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQ--------TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHH--------HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 3356677888999999999998888777663 35677778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
.++..++.++.++++++.. +|++.++|.+.|+ |.+...|..+++++|.+|+++|++++++++.+..+|..+|.+.+
T Consensus 102 ~vG~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvg 177 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVG 177 (493)
T ss_pred eeHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEee
Confidence 9999999999999999977 9999999999999 99999999999999999999999999999999999988887766
Q ss_pred HHh-----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 165 RFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 165 ~~~-----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
... .||+.|+..+++..++.++..++.+|+++...++.| ...+..+.....+||..
T Consensus 178 s~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~-------------------~~~~~~~~~ts~~kDl~ 238 (493)
T KOG1330|consen 178 SVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD-------------------GENKMVKPFTSVWKDLK 238 (493)
T ss_pred eeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccc-------------------cCCcCCCCccchHHHHH
Confidence 553 499999999999999999988899988764333210 00011122233455533
Q ss_pred HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHh---HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh---
Q 013707 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA---QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--- 313 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 313 (438)
.+.+++.+....+......+....+.-+.|.+... ..|.+..+..++..+...++.+|. +.+|.++||+.++
T Consensus 239 -~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~~~~~~ 316 (493)
T KOG1330|consen 239 -VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLSRIFPN 316 (493)
T ss_pred -HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHHHHhccc
Confidence 34445666666666666666666665555554433 235555555566667777777777 7888888884321
Q ss_pred -hHHHHHHH------HHHHHHHHh-Hhcc--cchHHHHHHHHHhhhhhhHHH-HHHHHhhcCCCCcchhHHHHHhhHhh-
Q 013707 314 -KLLSLGLF------AACINMFIC-SISW--SAWVPYATTAFSVLVVFATPS-FRSIVSKQVGPNEQGKAQGCISGISS- 381 (438)
Q Consensus 314 -~~~~~~~~------~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~- 381 (438)
.......+ ...+.++.+ .... +.+..++.+++|......... ...+..+.+|+++|.++.++...+..
T Consensus 317 ~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~ 396 (493)
T KOG1330|consen 317 SGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHI 396 (493)
T ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHH
Confidence 11111111 111111111 1111 222333345555544444433 33456788999999999999887764
Q ss_pred hhhhhhhHhHHHHHHHHhcCC
Q 013707 382 FANIVSPLIFSPLTALFLSKG 402 (438)
Q Consensus 382 ~g~~~g~~~~g~l~~~~~~~~ 402 (438)
+|.+-+|.+.|.+.|+..+++
T Consensus 397 fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 397 FGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred hccCCCcceehhHHHHhhCCC
Confidence 455556669999999876554
No 80
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.7e-30 Score=223.82 Aligned_cols=351 Identities=18% Similarity=0.156 Sum_probs=275.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhC------------------------------------------CCCccchh
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALC------------------------------------------PGLDECSL 48 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~ 48 (438)
..+....+++.+-...+.|.+|.|..|..+ ....+.+.
T Consensus 24 viv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~ 103 (464)
T KOG3764|consen 24 VIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLDR 103 (464)
T ss_pred EEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCccc
Confidence 345677788888899999999999988542 00133455
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhh
Q 013707 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (438)
Q Consensus 49 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 128 (438)
+..++|++.+...+.+++.+|+.|.+.||+|+|..+++++.....++++.++.++ ++.++++|.+||+ +++....+
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgv-gsA~~~ts 179 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGV-GSAFADTS 179 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhh-hHHHHHhh
Confidence 6688999999999999999999999999999999999999999999999999999 9999999999999 99999999
Q ss_pred hhHhhhccCCcc-chhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 013707 129 ALAYVADNISER-QRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (438)
Q Consensus 129 ~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 203 (438)
..++++|.+|++ ||++++|+...+.++|.++||.+|+.+ |.+.+|.+.+++.++...+..+.+++++.+++..
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~-- 257 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST-- 257 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc--
Confidence 999999999965 689999999999999999999999984 8999999999998888777777666654433221
Q ss_pred CcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhH
Q 013707 204 TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ 283 (438)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 283 (438)
.+..++++ +.++|..+.........+.........++.+..|.+.-+..+
T Consensus 258 --------------------------~~~~~~~~----Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~ 307 (464)
T KOG3764|consen 258 --------------------------EQGTPMWS----LLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWE 307 (464)
T ss_pred --------------------------ccCccHHH----HHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcc
Confidence 11123333 445777777777777777777788888999999988855658
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHH---H
Q 013707 284 FADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSF---R 357 (438)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~ 357 (438)
.|..+....+...++. .+.+.+.||++ |......+.+..++......+.++...+++ ....+++.+...... .
T Consensus 308 ~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 308 VGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred eeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 8999888899999988 77789999999 544555666666666666666666555444 333444433333222 2
Q ss_pred HHHhhcCCCC---cchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 358 SIVSKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 358 ~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.+..|....+ .-|.+.++.....++|.++||.++|.+++..
T Consensus 387 ~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 387 GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 2333322223 5689999999999999999999999998864
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6e-27 Score=205.47 Aligned_cols=350 Identities=16% Similarity=0.122 Sum_probs=285.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
-.+..+....++..+......+.+|.+.+ .++++..+.++++.+++.++.+.+++.|++.+|+|+|+.++.+
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~--------~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKE--------VFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHH--------HhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 34455556667777888888889988855 5678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
+.++++++.+..-+.+...+..++++-++.|. |.+...++.+.+++...|+++..+.+++.+..+++|.++||.+++.+
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~-Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILAS-GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHh-hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999998755554448999999999999 89999999999999999999999999999999999999999998763
Q ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHH-HhcccCCCCCCCCCCCcccchhccccccCCCCCCC
Q 013707 168 -----------------------STTSAFQAATIVSMLAAAYMR-VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP 223 (438)
Q Consensus 168 -----------------------~w~~~f~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (438)
.|+.+|...+....+..+... ...|+.++...++
T Consensus 164 ils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~---------------------- 221 (422)
T COG0738 164 ILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL---------------------- 221 (422)
T ss_pred HHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc----------------------
Confidence 256777777665443332221 1222222211111
Q ss_pred CCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 013707 224 VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFM 303 (438)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (438)
.+..+. ....++++|.++...+..|++........++++.|+.+..|.+..+.+...+....+.++++ +++
T Consensus 222 -----~~~~~~---~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig 292 (422)
T COG0738 222 -----GASGSA---GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIG 292 (422)
T ss_pred -----cccccc---hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHH
Confidence 000000 23346788999999999999999999999999999999889999999999999999999999 777
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhh
Q 013707 304 PLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (438)
Q Consensus 304 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (438)
.++.+|++..|.+........+.++...+.++.+.++...+.|++.+..+|+.++...+..| ++. +..|..-.+..+|
T Consensus 293 ~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~t-s~~s~~l~maivG 370 (422)
T COG0738 293 SALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHT-SVGSGLLVMAIVG 370 (422)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccc-cccceeeeeheec
Confidence 78888999999998888888888888888888888888899999999999999999999998 443 3444456677899
Q ss_pred hhhhhHhHHHHHHHHh
Q 013707 384 NIVSPLIFSPLTALFL 399 (438)
Q Consensus 384 ~~~g~~~~g~l~~~~~ 399 (438)
+++-|.+.|++.|..+
T Consensus 371 GAiiP~l~G~i~d~~g 386 (422)
T COG0738 371 GAIIPPLQGVIADMFG 386 (422)
T ss_pred chHHHHHHHHHHHhhh
Confidence 9999999999999854
No 82
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=3.2e-27 Score=225.35 Aligned_cols=380 Identities=10% Similarity=-0.013 Sum_probs=262.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-cCcchH
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAM 83 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~ 83 (438)
+++|.++.+++..+...++.....+.+|.|.++. .+++.+..+.|++.+.+.++..+++++.|+++|| +|||++
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 4467788888889999999999999999998642 1367788899999999999999999999999999 899999
Q ss_pred hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccc---hhHHHHHHHHHHHhhhhhh
Q 013707 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ---RASAFGILLGVLSASFVCG 160 (438)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g 160 (438)
+.++.++.+++.++.+++++ .+.+++.|.+.|+ +.+...|...++++|++|+++ |++++++.....++|..+|
T Consensus 82 l~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~-g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAV-GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 99999999999999999888 7888899999999 888888999999999998764 8889999999999999999
Q ss_pred HhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC-Ccccc-hhccc-------------cccCCCCC
Q 013707 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL-TRPII-TEETE-------------GVNQNESN 221 (438)
Q Consensus 161 ~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~-------------~~~~~~~~ 221 (438)
|.+++++ +|++.|++.++..++. ++.+...++..++.+++++ .++.. +.... ......+.
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV 236 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998874 8999999887654443 3333333332211111000 00000 00000 00000000
Q ss_pred CCCCc-------------cccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhH----H
Q 013707 222 SPVKI-------------PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ----F 284 (438)
Q Consensus 222 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~ 284 (438)
...+. .....++...+ ....|.+.+..+++...+....+....+.++.+.++..+.+... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~ 314 (475)
T TIGR00924 237 VIANILLMTVTLAVIIFFFRLAFKPRLDA--VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPV 314 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECH
Confidence 00000 00000000000 00011122444555556666677777777888887765544222 5
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHh-hchhhH--HHHHHHHHHHHHHHhHh---------cccchHHHH-HHHHHhh
Q 013707 285 ADLMLIAGLAGTISQLLFMP---LLAPI-LGEAKL--LSLGLFAACINMFICSI---------SWSAWVPYA-TTAFSVL 348 (438)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~---~l~~~-~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~ 348 (438)
+++.+..++..++.+.++.. ++.|| .+.+.. +.+|+++.++++....+ ..+.+..+. .++.+++
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 67888888888887733332 33333 222333 36788888888777664 234454444 6888999
Q ss_pred hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 349 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.....|..+++..+..|++.||+.+|+......+|..+++.+.....+
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999888888877776544
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=2.5e-27 Score=225.97 Aligned_cols=344 Identities=14% Similarity=0.087 Sum_probs=256.1
Q ss_pred HHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----cCcch-HhHHHHHHHHH
Q 013707 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTLSII 93 (438)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~-~l~~~~~~~~~ 93 (438)
...+..++..+.++.+..+ +.++++.+.|++.++..+...+..|+.|+++|| +|||| .++.+....++
T Consensus 10 ~~~~~~~~~~~~l~~~~~~-------~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i 82 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTD-------VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSI 82 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHH
Confidence 3444455666666666543 567888999999999999999999999999998 68755 56678788888
Q ss_pred HHHHHHhcccch---hHHHHHHHHHhhhhcchhhHhhhhhHhhhccC-CccchhHHHHHHHHHHHhhhhhhHhhhH----
Q 013707 94 PLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR---- 165 (438)
Q Consensus 94 ~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~---- 165 (438)
+.+++...++.+ ....+++.+++.++ +.+...+...++..|.. +++||++..++.+....+|..+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~ 161 (437)
T TIGR00792 83 VLVLLFTTPDFSATGKLVYAYITYILLGL-FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVS 161 (437)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777776522 24566778888888 66777777888999988 4689999999988888787665543321
Q ss_pred -------HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHH
Q 013707 166 -------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (438)
Q Consensus 166 -------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (438)
..+||..+.+.+++.++..+...+..||++++.+++ ++++.+.++.
T Consensus 162 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~~ 214 (437)
T TIGR00792 162 YFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN---------------------------IEKKLSLKQI 214 (437)
T ss_pred HhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---------------------------cccCCCHHHH
Confidence 237999999998887777666666777754221110 0011234555
Q ss_pred HHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q 013707 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (438)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (438)
.+.++++|.++...+..++..........+.+.|.++.++ ++.+.+.+.....++.+++. ++.+++.||+|+|+.+..
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFAG 292 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHH
Confidence 6667788888887777777777766666666677766555 55566777777778888887 788999999999999999
Q ss_pred HHHHHHHHHHHhHhcc-cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCC-------CCcchhHHHHHhhHhhhhhhhhhH
Q 013707 319 GLFAACINMFICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPL 389 (438)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~ 389 (438)
+..+..++.+.+.+.+ +.+.... ..+.+++.+...+..+++.+|..| ++.+|++.|+.+....+|..+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~ 372 (437)
T TIGR00792 293 GILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGF 372 (437)
T ss_pred HHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 9888888877766654 3333333 466778888888888899888765 456799999999999999999999
Q ss_pred hHHHHHHHHh
Q 013707 390 IFSPLTALFL 399 (438)
Q Consensus 390 ~~g~l~~~~~ 399 (438)
+.|.+.+..+
T Consensus 373 i~g~ll~~~G 382 (437)
T TIGR00792 373 LVGLILGIIG 382 (437)
T ss_pred HHHHHHHHcC
Confidence 9999999754
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=4.2e-26 Score=213.93 Aligned_cols=348 Identities=14% Similarity=0.096 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHH--HHHHHHHHHHHhhhhcc-cccccCcchHhHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQ--QAIIGLGTLVMMPVIGN-LSDQYGRKAMLTL 86 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~~~~~~~G~-l~Dr~Grk~~l~~ 86 (438)
+..+....+...+..++..|.+|.+.+| .+.+..++|++ .+...+...+.+|+++. ..||+||||.+++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~--------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE--------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 3445556677888889999999999884 36777888997 46778889899999955 7999999999766
Q ss_pred HHHH-HHHHHHHHH-hcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 87 PLTL-SIIPLAILA-YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 87 ~~~~-~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
...+ .+....... +........+++..-++.++ ..+...+...++..|..++++++...+....+..+|.++|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASL-ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5533 222222222 21221112333444555556 66778888999999999888888888888888888998888654
Q ss_pred H----HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHH
Q 013707 165 R----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (438)
Q Consensus 165 ~----~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (438)
+ .++||.+|++.+.+.++..+...+ .+|++++++++ + .+ ..++..
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~~-------------------------~-~~---~~~~~~- 202 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPEA-------------------------P-LA---RRASLF- 202 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCcccc-------------------------c-hh---hHHHHH-
Confidence 4 469999999999887665555433 44332211110 0 00 112222
Q ss_pred hhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHH
Q 013707 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (438)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (438)
...|+|.++......++..........+.+.|++| .|+++++.|.+....+....+.+.+..+++.||+|+|+.+..+.
T Consensus 203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 24556667777777777777788888899999988 69999999998888776444443388899999999999888777
Q ss_pred HHHHHHHHHhHh-c-----ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCC-CcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 321 FAACINMFICSI-S-----WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 321 ~~~~~~~~~~~~-~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
.+.++..+.... . .+....+. ..+.++..+...+..++...+..++ +++|+.++..+...++|..+||.+.|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655333222211 1 11122222 2333455677777788887777776 88999999999999999999999999
Q ss_pred HHHHHH
Q 013707 393 PLTALF 398 (438)
Q Consensus 393 ~l~~~~ 398 (438)
.++|+.
T Consensus 362 ~l~~~~ 367 (390)
T TIGR02718 362 YLTDRF 367 (390)
T ss_pred HHHHHH
Confidence 999974
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=4.8e-26 Score=217.24 Aligned_cols=375 Identities=10% Similarity=0.056 Sum_probs=250.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-cC
Q 013707 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YG 79 (438)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~G 79 (438)
|++++.+|.++.++...+...++.....+.++.|.++ +++.+....+++.+.+.....+..++.|+++|| +|
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~-------~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G 79 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVK-------QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG 79 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc
Confidence 3344446778888888888999999999999999865 445566677888888888888888999999999 99
Q ss_pred cchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc--chhHHHHHHHHHHHhhh
Q 013707 80 RKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASF 157 (438)
Q Consensus 80 rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~ 157 (438)
|||+++.+.++++++.+.++++++. ...++++|.++|+ +.|...|...+++.|.+|++ +|.+++++...+.++|.
T Consensus 80 ~r~~~~~g~~~~~~g~~~~~~~~~~--~~ll~~~~~l~~i-g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~ 156 (489)
T PRK10207 80 TKRTIVLGAIVLAIGYFMTGMSLLK--PDLIFIALGTIAV-GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGS 156 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHH
Confidence 9999999999999999999998762 2235589999999 88999999999999999876 45778999999999999
Q ss_pred hhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-----CCCCCCcccchhc--------c-ccccCCC
Q 013707 158 VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND-----DDDDLTRPIITEE--------T-EGVNQNE 219 (438)
Q Consensus 158 ~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--------~-~~~~~~~ 219 (438)
.+||.++++ +|||+.|++.++. .+..++.+...++..++. +++.|.++..... . ....+..
T Consensus 157 ~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~ 235 (489)
T PRK10207 157 LISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV 235 (489)
T ss_pred HHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 888887776 4999999987543 333333333334322111 1111111110000 0 0000000
Q ss_pred CCCCCC------------ccccccCCchhHHHHhhcccchhHHHHH--HHHHHHhhhchhhHHHHHHHHhHcCCChh---
Q 013707 220 SNSPVK------------IPVCKKIPSIRDLICLLRSSVTLSQAAV--VAFFSGLSEGGMQASFLYFLKAQFHFNKN--- 282 (438)
Q Consensus 220 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--- 282 (438)
...... -.++++. + ...|+|.+....+ ...+....+......++.|.++..+.+..
T Consensus 236 ~~~~~~~~~~~~i~~~~f~~~~~~~-~------~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~ 308 (489)
T PRK10207 236 EVANLVLIVLSIVVTIIFFREAFKL-D------KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFS 308 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-C------HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceE
Confidence 000000 0000000 0 1223343333222 23444455555667778888753333210
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh-------HHHHHHHHHHHHHHHhH-----hc-----ccchHHHH-HH
Q 013707 283 -QFADLMLIAGLAGTISQLLFMPLLAPILGEAK-------LLSLGLFAACINMFICS-----IS-----WSAWVPYA-TT 343 (438)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~-~~ 343 (438)
..+.+.+...+..++.+ ++.+++.||+++|+ -+..|+++.+++++.+. .. .+.+.... ..
T Consensus 309 i~~~~~~~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~ 387 (489)
T PRK10207 309 INPVSFQALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYL 387 (489)
T ss_pred ECHHHHHhHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHH
Confidence 12344445555665666 66679999998886 36677777777765331 21 12233333 57
Q ss_pred HHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHH
Q 013707 344 AFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 394 (438)
+.+++.....|...+.+.+..|++.+|.++|+.+....+|+.+|..+.+..
T Consensus 388 l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 388 FQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999999999988777654
No 86
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.96 E-value=3.6e-25 Score=206.86 Aligned_cols=394 Identities=13% Similarity=0.069 Sum_probs=279.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccc----ccCcchHhH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT 85 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~l~ 85 (438)
+..+....+-..+++++..+.++.|.+ +.+.+..+.+++..+..+...+.+|+.|.++| |+||||+++
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~--------~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~i 77 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQ--------ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFI 77 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHH
Confidence 344455555667788888899998876 44667788999999999999999999999999 599999988
Q ss_pred HH-HHHHHHHHHHHHhcccchh--------------HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccch--hHHHHH
Q 013707 86 LP-LTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFGI 148 (438)
Q Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~ 148 (438)
.+ .....++..+.+++++... .+..+++-.+..+ +.....+...++++|.+|+++| +.++++
T Consensus 78 l~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~-~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 78 AAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDV-ANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 75 5666667777777765210 0222333334445 5666777889999999998865 579999
Q ss_pred HHHHHHhhhhhhHhhhHHh-------------------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccch
Q 013707 149 LLGVLSASFVCGTLAARFL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT 209 (438)
Q Consensus 149 ~~~~~~~g~~~g~~l~~~~-------------------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (438)
.+...++|.++|+.++++. +.|..|++.+++.+++.++..+..||.+..++++.+ +
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~-~---- 231 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI-N---- 231 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch-h----
Confidence 9999999999999988763 347789998888888888888889997653222100 0
Q ss_pred hccccccCCCCCCCCCccccccCCchhHHHHhhcc-cchhHHHHHHHHHHHhhhchhhHHHHHHHH-hHcCCChhH----
Q 013707 210 EETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQ---- 283 (438)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~---- 283 (438)
++.++ .++.+....+++.++.+++ +|.++.+++..++.++++..+..+.+.|.. +.++-++.+
T Consensus 232 -------~~~~~----~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y 300 (477)
T TIGR01301 232 -------SEAAP----PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKY 300 (477)
T ss_pred -------hhccc----ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHH
Confidence 00000 0000111244555555443 678899999999999999999888888875 456543211
Q ss_pred -H-----HHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHhHhccc---------------------
Q 013707 284 -F-----ADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISWS--------------------- 335 (438)
Q Consensus 284 -~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------- 335 (438)
. .+.....++...+.+ ++..++.+|+|+ |+.-..+.++.++++....+.++
T Consensus 301 ~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (477)
T TIGR01301 301 DDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGI 379 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhh
Confidence 1 122334444445555 667889999985 66667887777777777664332
Q ss_pred chHHH-HHHHHHhhhhhhHHHHHHHHhhcCCC--CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHH
Q 013707 336 AWVPY-ATTAFSVLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSI 412 (438)
Q Consensus 336 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~ 412 (438)
.+..+ ...+.|+.........++++++..|+ +..|..+|+.|....+.+.+.....|.+.+.+++ .....+
T Consensus 380 ~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~------~~~~~~ 453 (477)
T TIGR01301 380 KASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG------GNLPAF 453 (477)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC------CCeeHH
Confidence 12223 36778999999999999999999995 4569999999999999999999999986666543 233456
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc
Q 013707 413 MCIGLASVRAFTYELLLSFYVFS 435 (438)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
.++++..+++.+..+++.|+.++
T Consensus 454 ~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 454 VVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 77888888888888777776543
No 87
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.1e-26 Score=217.31 Aligned_cols=314 Identities=15% Similarity=0.041 Sum_probs=240.3
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcch
Q 013707 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (438)
Q Consensus 43 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (438)
.+|.+....+.+.+.+++.++++++.++.|.+.||++-.+.+....+.+++..++.....| ++.+++.|++.|+ .+
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl-~e 148 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGL-FE 148 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH-Hh
Confidence 4566777788999999999999999999999999999999999888888888888888888 9999999999999 89
Q ss_pred hhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----------hhHHHHHHHHHHHHHHHHHHHHHhcc
Q 013707 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTSAFQAATIVSMLAAAYMRVFLK 192 (438)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----------~~w~~~f~~~~~~~~i~~~~~~~~~~ 192 (438)
+..+|....+++.|+.++||+..++++.+..++|.++|++++.. .|||+.|++.+++.++..++..+.+|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 99999999999999999999999999999999999999988865 28999999999999999889999999
Q ss_pred cCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHH
Q 013707 193 DDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYF 272 (438)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (438)
+.|.+..-.++.++.....+.+.. +.....++ .+.++.. ...++|.+|...+..++.....++..+++|.|
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~------~~~~~~~~--~~~~~~~-~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~ 299 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRES------PSGGIENK--FKWKGFK-EALKDPGVWPFSLCYFFLKLVNYGFSYWLPLY 299 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhc------cCCCcccc--cCHHHHH-HHHhchhHHHHHHHHHHHhhccccHHHHHHHH
Confidence 998755222111111000000000 00000000 2333323 35567889999999999999999999999999
Q ss_pred HHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hchhhHHHHHHHHH-HHHHHHhHhcccchHHHH-HHHHH
Q 013707 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLLSLGLFAA-CINMFICSISWSAWVPYA-TTAFS 346 (438)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 346 (438)
+++..|+|..+...+.....++++++. ++++.++|| ..+|........+. .++...+........... .....
T Consensus 300 l~~~~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~ 378 (495)
T KOG2533|consen 300 LKSNGGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGP 378 (495)
T ss_pred HHcCCCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcc
Confidence 999667999999999999999999998 889999999 44555544444433 344344444443444443 33444
Q ss_pred hhhhhhHHHHHHHHhhcCCCCcch
Q 013707 347 VLVVFATPSFRSIVSKQVGPNEQG 370 (438)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g 370 (438)
.+.....+......++...++.|.
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~ 402 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKA 402 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHh
Confidence 556666777778888777655554
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=9.1e-25 Score=201.94 Aligned_cols=344 Identities=20% Similarity=0.210 Sum_probs=258.9
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccC-cchHhHHHHHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-RKAMLTLPLTLS 91 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rk~~l~~~~~~~ 91 (438)
+....++..+..+...|.+|.+.+ +.+.+..++|.+.+...+..+++++++|.++||++ +||.+.+..++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~--------~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLE--------SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 455567777888999999999987 44677899999999999999999999999999986 577887777777
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh-----hHH
Q 013707 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA-----ARF 166 (438)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l-----~~~ 166 (438)
++........++ ++.++..-++..+ ......|...++..+... ++++-.|......++|.+++... .+.
T Consensus 79 ~~~~~~~~~~~~---f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 79 ALALLLLAFSSS---FWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 777767777777 7777777777777 566777888888888775 34455666777777777766432 222
Q ss_pred hhH---HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhc
Q 013707 167 LST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (438)
Q Consensus 167 ~~w---~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (438)
.++ ...+++.+...++.. ...+.+|+.|++++.++ ..++...++..+ +.
T Consensus 153 ~~~~~~~~~~~i~~~~~~ll~-~~~l~lp~~~~~~~~~~--------------------------~~~~~~~~~~~~-ll 204 (400)
T PF03825_consen 153 LGISGTSLIFYIAAILSLLLA-GFALFLPKTPPKRSAKE--------------------------SVKKLLGLDALK-LL 204 (400)
T ss_pred hccccccHHHHHHHHHHHHHH-HHHHhCCCCccccccCC--------------------------CcccccchHHHH-Hh
Confidence 222 245565555443332 23355777763322210 001112233333 45
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
|+|.+...++..++.+......+++.+.|+++.-|.+....+...+...+..++.- ...+++.+|+|.++++.++....
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 56778888888888888999999999999999533777888887777777776765 78899999999999999999999
Q ss_pred HHHHHHhHhc-ccchHHHH-H----HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhH-hhhhhhhhhHhHHHHHH
Q 013707 324 CINMFICSIS-WSAWVPYA-T----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTA 396 (438)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~g~~~~g~l~~ 396 (438)
++-..+++.. ++.+..+. . .+.|...+........++.+.+|++.|++++++++.. ..+|..+|..++|+++|
T Consensus 284 ~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999887 44443333 2 3578999999999999999999999999999998876 58999999999999999
Q ss_pred HHh
Q 013707 397 LFL 399 (438)
Q Consensus 397 ~~~ 399 (438)
+++
T Consensus 364 ~~g 366 (400)
T PF03825_consen 364 AFG 366 (400)
T ss_pred Hhc
Confidence 864
No 89
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=2e-25 Score=215.82 Aligned_cols=363 Identities=17% Similarity=0.137 Sum_probs=250.7
Q ss_pred hhhhhhhhHHHHHHhhCCCCccchhhH--HHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc
Q 013707 24 TMMVVPAITDVTMMALCPGLDECSLAI--YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (438)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (438)
.+...+..+.+..+.. ..+...+. .+.+++.+...++..+++++.|+++|++|||+.++++.+.+.++.++++++
T Consensus 63 ~g~~s~~~~~~~~~~~---~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a 139 (513)
T KOG0254|consen 63 IGGISGALDFLQRFAS---LYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA 139 (513)
T ss_pred cccchhhHHHHHhccc---ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3556666666655321 11112211 456999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----hHHHHHHHH
Q 013707 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAA 176 (438)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~ 176 (438)
+| +++++++|++.|+ |.|........+++|..|++.||...+..+....+|..+|..++... +||..+.+.
T Consensus 140 ~~---~~~l~~GR~l~G~-g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~ 215 (513)
T KOG0254|consen 140 PS---WYQLIVGRILTGL-GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLA 215 (513)
T ss_pred hh---HHHHHHHHHHhcc-chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHH
Confidence 99 9999999999999 88999999999999999999999999999999999999997777665 699999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCCCccc---chhccccc-cCCCCCCC------CCccccccCC-chhHHHHhhccc
Q 013707 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPI---ITEETEGV-NQNESNSP------VKIPVCKKIP-SIRDLICLLRSS 245 (438)
Q Consensus 177 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~ 245 (438)
.+.+++..+. .+++||+|+...++.+.+++ ........ ++.+.+.. ..+....+.+ .+++.++...++
T Consensus 216 ~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 294 (513)
T KOG0254|consen 216 LIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRK 294 (513)
T ss_pred HHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHH
Confidence 8888777666 88999999865443332222 22222211 00000000 0000000111 233322211223
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
+......+..+....+......+.+.+++. .|.+... .......++...++. .+...+.||+|||+.++.+...+.+
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHH
Confidence 334444555555555556667777777766 4666443 334445556666666 5667999999999999999999999
Q ss_pred HHHHhHhcc----c--------chHHHH--HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhH
Q 013707 326 NMFICSISW----S--------AWVPYA--TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (438)
Q Consensus 326 ~~~~~~~~~----~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 391 (438)
+.++++... . .+..+. +...........|..+.+.+|.+|.+.|+++.++....+.+.+.+-....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~ 451 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFF 451 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 988877532 1 111222 22223334444566777889999999999999999999987777665554
Q ss_pred HHHHHH
Q 013707 392 SPLTAL 397 (438)
Q Consensus 392 g~l~~~ 397 (438)
....+.
T Consensus 452 ~~~~~~ 457 (513)
T KOG0254|consen 452 PFITEA 457 (513)
T ss_pred HHHHHh
Confidence 444443
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.5e-25 Score=210.50 Aligned_cols=367 Identities=15% Similarity=0.136 Sum_probs=276.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHH-Hhhhhcchh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALR-TLTAMVCEG 123 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~~ 123 (438)
+++.+..+.+|+.++..-...+.+|+.+.+.||+|.|++.+.+.++.+++.++..++++ +|.+++.. ++.|+ |.+
T Consensus 75 ~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~-G~~ 150 (509)
T KOG2504|consen 75 YFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGL-GLG 150 (509)
T ss_pred HhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhc-cch
Confidence 44445566899999999999999999999999999999999999999999999999999 76655554 66788 888
Q ss_pred hHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 013707 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (438)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~ 199 (438)
.........+..+++ ++|+.+.|+...+.++|..+-|.+..+ +|||+.+++.+.+.+-..+.....-|.+++..+
T Consensus 151 ~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~ 229 (509)
T KOG2504|consen 151 LIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKP 229 (509)
T ss_pred hhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCc
Confidence 888888888887775 889999999999999999888877766 499999999988876555555555553333211
Q ss_pred CC-CCCcc---cchhc----------cccccCC----CCCCCCCccccccCCchhHHH----HhhcccchhHHHHHHHHH
Q 013707 200 DD-DLTRP---IITEE----------TEGVNQN----ESNSPVKIPVCKKIPSIRDLI----CLLRSSVTLSQAAVVAFF 257 (438)
Q Consensus 200 ~~-~~~~~---~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 257 (438)
.+ +|.+. ..+.. ......+ ..+...+.+.+....+.+... ..+.+++.++...+...+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~ 309 (509)
T KOG2504|consen 230 NEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLF 309 (509)
T ss_pred hhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHH
Confidence 10 00000 00000 0000000 000000000000100111111 235567889988899999
Q ss_pred HHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHhHhccc
Q 013707 258 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWS 335 (438)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 335 (438)
...++.....++|.|.++ .|++..+.+.+.+..++..+++. ++.|++.|+.. ++.+..++.+..+++.+..++.++
T Consensus 310 ~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~ 387 (509)
T KOG2504|consen 310 AYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT 387 (509)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999996 79999999999999999999999 88899999877 455667777778888878888888
Q ss_pred chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHH
Q 013707 336 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMC 414 (438)
Q Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~ 414 (438)
.+.+.. ..++|+..+.........+.|.++.++-..+.|+....+.++..+||++.|.+.|..++++..++..+...+.
T Consensus 388 ~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~ 467 (509)
T KOG2504|consen 388 YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLL 467 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHH
Confidence 877766 6888999998888888899999999999999999999999999999999999999987777666665655554
Q ss_pred HHHH
Q 013707 415 IGLA 418 (438)
Q Consensus 415 ~~~~ 418 (438)
.+.+
T Consensus 468 s~~~ 471 (509)
T KOG2504|consen 468 SAVL 471 (509)
T ss_pred HHHH
Confidence 4433
No 91
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=5.6e-24 Score=184.04 Aligned_cols=340 Identities=16% Similarity=0.148 Sum_probs=269.4
Q ss_pred HHHHHHHHHHhhh----hhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 12 HLFVTVFLWGFAT----MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 12 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
.+..+..+..+.. ..+.|.++.+ .+|.+.|....|++.++..+...+.+++..+++.|+|.++.+..+
T Consensus 12 ~li~gIvlia~NLR~~itsvgPLL~~I--------r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~ 83 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGPLLDEI--------RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLA 83 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhhhHHHH--------HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHH
Confidence 3344444444443 4556666666 447788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh----
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA---- 163 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l---- 163 (438)
+++.+++.++-... + .+.++.+-.+.|. +.+..+...++.+-+.+| |+-+..+|++.+..++|..+++.+
T Consensus 84 Llli~~G~~iR~~~-~---~~~L~~gt~l~G~-gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpl 157 (395)
T COG2807 84 LLLIAAGILIRSLG-G---LPLLFLGTLLAGA-GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPL 157 (395)
T ss_pred HHHHHHHHHHHhcc-c---HHHHHHHHHHHHh-hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHH
Confidence 99999999988877 4 6888999999999 899999999999999998 667899999999998887776544
Q ss_pred hHHh-hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhh
Q 013707 164 ARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (438)
Q Consensus 164 ~~~~-~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
.... +||.....-+.+++++.+.. +|...+++..+ ...+..+.. .+
T Consensus 158 a~~~~gW~~aL~~WAl~allAl~~W---lPq~~r~~~~~--------------------------~~~~~~~~~----~v 204 (395)
T COG2807 158 AQHSGGWRGALGFWALLALLALLIW---LPQALREQAAS--------------------------IATKLVSVR----KV 204 (395)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHH---hhhcccccccc--------------------------ccccccccc----cc
Confidence 4444 79999888888877665443 33322111110 000001111 26
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-EAKLLSLGLF 321 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~ 321 (438)
+++|.-|.+.+..-+.++.++....|+|.++.|+ |+|+.+.|.+.+...+..+..+ +..+.+.+|.+ +|+.......
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHH
Confidence 6789899999999999999999999999999994 9999999999999999999999 88899999764 4667777777
Q ss_pred HHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCC-CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 322 AACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
++.+++..+.+.+......-.+++|++.+..+|.....+.+..++ ++.++-.|+.+..+++-.+.||.+.|++.|..++
T Consensus 283 ~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 283 LMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 888888888776654433336889999999999988888766544 5567888899999999999999999999998665
No 92
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=4.1e-25 Score=214.89 Aligned_cols=339 Identities=18% Similarity=0.125 Sum_probs=241.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHh
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 126 (438)
..+.....+.++++.+|.++|++++|.++||+|||+++++++++..++.+..++++| ++.+++.|++.|+ +.+...
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~-~~~~~~ 189 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGF-FGSGPL 189 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hccchh
Confidence 345577889999999999999999999999999999999999999999999999999 9999999999999 778888
Q ss_pred hhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh--hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 013707 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT 204 (438)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 204 (438)
.+...++.|+.++++|+.+..+ ......+..+++..++++ +||+.+++..++.++..++ ++..||+++....+.+.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~ 267 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRI 267 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCch
Confidence 8999999999999999999999 666666777777777665 8999999999988766554 66677999876555554
Q ss_pred cccchhccccccC---CCCCCC---C---CccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHh
Q 013707 205 RPIITEETEGVNQ---NESNSP---V---KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA 275 (438)
Q Consensus 205 ~~~~~~~~~~~~~---~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (438)
++..+..++..+. +.+... . .+.........+.....+.+.+.++...+...+..+.......-++.....
T Consensus 268 ~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~ 347 (521)
T KOG0255|consen 268 DEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSG 347 (521)
T ss_pred HHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhh
Confidence 4444333221111 000000 0 000000000000112224445545555555555544444444444444433
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchH---HHH-HHHHHhhhhh
Q 013707 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV---PYA-TTAFSVLVVF 351 (438)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~ 351 (438)
+|.+... .....+....... ...+...|+.|||.....+..+..++++...+...... ... ..+..++.+.
T Consensus 348 -lg~~~~~---~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
T KOG0255|consen 348 -LGGNIYL---NFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGS 422 (521)
T ss_pred -cCchHHH---HHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Confidence 4555433 2333333444444 56678899999999999999999999999888765432 333 3445566666
Q ss_pred hHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 352 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.....+.+..|..|+..|+.+.+..+....++.+++|.+.-....
T Consensus 423 ~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 423 AFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 777779999999999999999999999999999999987754433
No 93
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=1.1e-23 Score=190.82 Aligned_cols=384 Identities=14% Similarity=0.093 Sum_probs=262.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (438)
++++.+.+....+...+..+...|..|..+++ +.+++..++|.+.++..+..++.+|+.|.++||.|.||-++
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~-------~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQ-------VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL 77 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence 35567777778888889999999999999874 35788899999999999999999999999999999766655
Q ss_pred HHHHHHH---HHHHHHHhccc--chhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh
Q 013707 86 LPLTLSI---IPLAILAYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 86 ~~~~~~~---~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (438)
....... ...+...+.|- .+.+...+++-...|+ .-....|+..+++.+.. ++.+.-.|-.....++|.+++
T Consensus 78 ~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~-~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~ 154 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGL-VFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIA 154 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTT-TTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHH
Confidence 4433221 22222233221 1112233444444565 44555677888877765 345566788888889999999
Q ss_pred HhhhHHh---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH
Q 013707 161 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (438)
Q Consensus 161 ~~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (438)
..++|.+ +.+..||+....+++..++....-|+.+++.+.. | .+..++++.+.++
T Consensus 155 s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~ 212 (412)
T PF01306_consen 155 SLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-D---------------------ALGAKKDKVSLKD 212 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-T---------------------TSSS------HHH
T ss_pred HHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-c---------------------ccccCCCCCcHHH
Confidence 9888875 5577888776665554444333333333222111 0 0011112224555
Q ss_pred HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013707 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (438)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (438)
..+ +.|+|++|.+.+........+..+....+.|.++.+ +.+....|++.+...+..++.. .+.+++.+|+|.|+
T Consensus 213 ~~~-l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k~ 290 (412)
T PF01306_consen 213 VLS-LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAKN 290 (412)
T ss_dssp HHH-HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHH
T ss_pred HHH-HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChHh
Confidence 444 456788888888777777777777777888887643 2344557888888777777776 88899999999999
Q ss_pred HHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHH-hhHhhhhhhhhhHhHH
Q 013707 315 LLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFS 392 (438)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~g~~~~g 392 (438)
.++++..++.+-....++.++.+.+.. -.+.++-.........-++++.+|++..++.+.+. +...+++..+.+.+.|
T Consensus 291 ~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G 370 (412)
T PF01306_consen 291 LLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAG 370 (412)
T ss_dssp HHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 999999999999999999999887776 58889999999999999999999999999999885 6888999999999999
Q ss_pred HHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 393 PLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
.++|+.+ ..-.+.+.+.+.+...++..+..+
T Consensus 371 ~lyd~~G--------~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 371 YLYDRIG--------FQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hhHhhcC--------cHHHHHHHHHHHHHHHHHheeeec
Confidence 9999864 122344444445544444444433
No 94
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.94 E-value=3.1e-23 Score=195.34 Aligned_cols=353 Identities=14% Similarity=0.136 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH-HHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhh
Q 013707 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (438)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 128 (438)
....++..++..+...+..|+.|.++|+-|+||.++ ....+..+++..+.+.+. +.++...+.-++.-+ +.+.....
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~-~~~~~~~~l~iia~v-~~~~~~vf 146 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSP-GQWWLALVLFIIANV-GYEASNVF 146 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHH-HHHHHHHH
Confidence 355678899999999999999999999998766655 455566667777776522 224444444455445 66677778
Q ss_pred hhHhhhccCCccch--------------------------hHHHHHHHHHHHhhhhhhHhhhHH------------hhHH
Q 013707 129 ALAYVADNISERQR--------------------------ASAFGILLGVLSASFVCGTLAARF------------LSTT 170 (438)
Q Consensus 129 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~l~~~------------~~w~ 170 (438)
.++++.|..+++++ ++..+.-.+...+|.++.-.+.-. .+-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999998888 888887777777777665444322 1247
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHH
Q 013707 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (438)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (438)
..+.+.++..++..+...+.+||.|+++..+.. .+.........++.++..+|.|.+..
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~---------------------~~~~~~g~~~l~~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG---------------------SSYLRFGFKRLWRTFKEIRKLRQLFL 285 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc---------------------hhHHHHHHHHHHHHHHHHHhChHHHH
Confidence 888888888777778888888888763222100 00001111233444566778889999
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh--hHHHHHHHHHHHHHH
Q 013707 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMF 328 (438)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~ 328 (438)
.++..+++.-+...+......|.++++|++..+...+.....+.++++. ++.+++.||+|.| +++..+.....+..+
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 8888999999998 777777666644333
Q ss_pred HhHh--------cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 329 ICSI--------SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 329 ~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
.-.+ .++.+.+++ ..+.|+..+..++...++.+++.|+++.++.+|++.........+||.+.|.+.+.++
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3333 445666666 6788999999999999999999999999999999999999999999999999999875
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 013707 400 SKGAPFNFPGFSIMCIGLASVRAFTYELLLSFYV 433 (438)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
+.. ..+....++.++++++....+.++
T Consensus 445 ~~r-------~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 445 SQR-------YGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred Cch-------hHHHHHHHHHHHHHHHHhhccchh
Confidence 432 233444455666666665555444
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.94 E-value=9.2e-31 Score=250.55 Aligned_cols=403 Identities=16% Similarity=0.176 Sum_probs=257.7
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHhh---CCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHH
Q 013707 15 VTVFLWGFATMMVVPAITDVTMMAL---CPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (438)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (438)
++.+...++.+...+..+....... ....++.+.+..+.++..+...++..+++++.|.++||+|||+.+..+.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 3446677777666655555442211 1111222224567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc---cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 92 IIPLAILAYRR---SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 92 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
.++.++.++++ + ++.+.++|+++|+ +.|...+....++.|..|+++|++..++.+....+|..++..++...
T Consensus 87 ~i~~~~~~~~~~~~~---~~~~~~~R~~~G~-~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 87 IIGSILIAFAPSYNN---FWMLLIGRFLIGF-GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred ccccccccccccccc---ccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 7 8999999999999 88999999999999999999999999999999999988887665432
Q ss_pred ---h---HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC---CCcccchhccccccCCCCCCCC-Cc--cccccCCch
Q 013707 168 ---S---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD---LTRPIITEETEGVNQNESNSPV-KI--PVCKKIPSI 235 (438)
Q Consensus 168 ---~---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ 235 (438)
+ ||..+.+..+++++. ++...++||+|+....++ ++++..++.+.++..+++.++. ++ ...+.+..+
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASW 241 (451)
T ss_pred cccccccccccccccccccccc-cccccccccccceecccccccccccccccccccccccccccccccccccccccceee
Confidence 4 999999988887654 445578999998654443 3333333322121111111111 11 111111233
Q ss_pred hHHHHhhcccchhHHHHHHHHHHHhhh-chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013707 236 RDLICLLRSSVTLSQAAVVAFFSGLSE-GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (438)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (438)
++.++....++.............+.. .....+.+...++ .+.++.. .......+...++. +....+.||+|||+
T Consensus 242 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 242 RDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNSF--LATLILGLVNFLGT-LLAIFLIDRFGRRK 317 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccc-ccccccc--cccccccccccccc-cccccccccccccc
Confidence 332221111112222222222222222 2333444444443 5666651 12223334444444 55568999999999
Q ss_pred HHHHHHHHHHHHHHHhH--h---ccc----chHHHH-HHHHHhhhh-hhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhh
Q 013707 315 LLSLGLFAACINMFICS--I---SWS----AWVPYA-TTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (438)
Q Consensus 315 ~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (438)
++..+....+++.+.+. . ..+ ....+. ..+.....+ ...+..+.+..|.+|.+.|+++.|+....+.++
T Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~ 397 (451)
T PF00083_consen 318 LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIG 397 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 99999888887777664 1 111 111122 222222222 445677788899999999999999999999999
Q ss_pred hhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 013707 384 NIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFYVF 434 (438)
Q Consensus 384 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
+.++|.+...+.+... ....+.+.+.++++..+..+...|+.+
T Consensus 398 ~~i~~~~~~~~~~~~~--------~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 398 GFIIPFLFPYLFNNLG--------GWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred cccccccccccccccc--------ccccchhhHHHHHHHHhheeEEEeeCC
Confidence 9999999888776532 122233344444545555444444433
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.7e-26 Score=204.66 Aligned_cols=415 Identities=13% Similarity=0.098 Sum_probs=279.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+.+.-.+.+.+..+...+.++.|.+.+...+...+.-+.+....+.+..+..+|.++++++.|+++||+|||+++...++
T Consensus 43 i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~li 122 (538)
T KOG0252|consen 43 IIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELI 122 (538)
T ss_pred HHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHH
Confidence 33334556677777777777777666554333333344566777899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccc----hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 90 LSIIPLAILAYRRSI----SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
+..+++++++++... ....++...|++.|+ |.|+-+|.+.+..+|...+++||...+.+-+.++.|.+.|.+++-
T Consensus 123 ImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGi-GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~ 201 (538)
T KOG0252|consen 123 IMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGI-GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVAL 201 (538)
T ss_pred HHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhc-cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHH
Confidence 999999988776432 346899999999999 999999999999999999999999999998888888888776653
Q ss_pred Hh-------------------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC-CCCCcccchhccccccC-CCCCCCC
Q 013707 166 FL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD-DDLTRPIITEETEGVNQ-NESNSPV 224 (438)
Q Consensus 166 ~~-------------------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 224 (438)
.+ -||..|.+.++++++. ++....+||+++-+.. .+|.+.+.+...+..+. -++++..
T Consensus 202 Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~ 280 (538)
T KOG0252|consen 202 IVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTA 280 (538)
T ss_pred HHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcc
Confidence 31 4999999988886554 5556788998764311 11111111100000000 0011111
Q ss_pred CccccccCCchhHHHHhhccc--chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHH--------HHHHHHHH
Q 013707 225 KIPVCKKIPSIRDLICLLRSS--VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--------LMLIAGLA 294 (438)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~ 294 (438)
+......++..+...+.+.++ +.+.......|+.-.+++..+.+....+++ .|+.+.+... .......+
T Consensus 281 ~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~ 359 (538)
T KOG0252|consen 281 ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVC 359 (538)
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHH
Confidence 111111112222233333333 455566667777778888888777777765 4665554333 12222223
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchH----HHH--HHHHHhhhhhhHHHHHHHHhhcCCCCc
Q 013707 295 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV----PYA--TTAFSVLVVFATPSFRSIVSKQVGPNE 368 (438)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (438)
+.+..+.+...++|++||+++.+.++.++.+..+.++...++.. ..+ .+...++..........+..|.+|.+.
T Consensus 360 ~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv 439 (538)
T KOG0252|consen 360 STVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV 439 (538)
T ss_pred ccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH
Confidence 33322245556789999999999999999999998888766211 111 222233333334455566799999999
Q ss_pred chhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 013707 369 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLS 430 (438)
Q Consensus 369 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (438)
||+..|+....+..|+++|...++++.++- ..+.......+.+.+.+++++.+..+.+.
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~---yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHN---YPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhcc---CCccccchHHHHHHHHHHHHhHheeEEee
Confidence 999999999999999999999999887742 12223445577777888888777666554
No 97
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=4.2e-24 Score=194.37 Aligned_cols=404 Identities=10% Similarity=0.004 Sum_probs=263.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHH-HHHHHHHHHHHHHHHhhhhcccccccCcc
Q 013707 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYL-SGFQQAIIGLGTLVMMPVIGNLSDQYGRK 81 (438)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk 81 (438)
|+.|++....+|+-.|+..+ -...|....++. +|++++..+ .|.+.++++.+++++.++.|+++||+|.|
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~--R~n~s~a~p~L~-------~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K 92 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQF--RPGESFITPYLL-------TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK 92 (511)
T ss_pred hcchhHHHHHHHHHHHHHHh--hchHHHHHHHHH-------HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 45677665555554444332 222222222322 267888888 99999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhH
Q 013707 82 AMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (438)
+++..+.+.+++.+++.+++++ +..+.+.|++.|+ +.|... +...++.+++|++||+++.++..++..+|.++++
T Consensus 93 ~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGv-aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~ 167 (511)
T TIGR00806 93 PVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSV-TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSS 167 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999999 899998 9999999999999999999999999999999999
Q ss_pred hhhHH---hhHHHHHHHHH--HHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCc--cccccCCc
Q 013707 162 LAARF---LSTTSAFQAAT--IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI--PVCKKIPS 234 (438)
Q Consensus 162 ~l~~~---~~w~~~f~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 234 (438)
++++. +|||+-+.++- ..+....++..+++|..++..--+++.++..+...+.+...+++..... .+......
T Consensus 168 ~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (511)
T TIGR00806 168 VLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSF 247 (511)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHH
Confidence 88876 37876544331 2222333455567885544211110000000000000000000000000 00001111
Q ss_pred hhHHH---HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013707 235 IRDLI---CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (438)
Q Consensus 235 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (438)
.+..+ +...+|+.+....+=..+...++..+.++.....++..+-.+...|..-++..+.+.+.. +..|.+-.+..
T Consensus 248 ~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w~ 326 (511)
T TIGR00806 248 LVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRWA 326 (511)
T ss_pred HHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCch
Confidence 22222 223456766666666666666777777776666655433222355777788888888877 77777755554
Q ss_pred hh--hHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhh
Q 013707 312 EA--KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (438)
Q Consensus 312 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 388 (438)
+. ..+.+..++.+..++++.+.++.|..+. -+++........+.....+.+....|.-|-++|+++.+..+-+.+-.
T Consensus 327 ~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT 406 (511)
T TIGR00806 327 RWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIIT 406 (511)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheE
Confidence 32 3445555666777788888999999988 46778888888888888888888888889999998887765555444
Q ss_pred HhHHHHHHHH-h--cCCCCCCCCchHHHHHHHHHHHHHH
Q 013707 389 LIFSPLTALF-L--SKGAPFNFPGFSIMCIGLASVRAFT 424 (438)
Q Consensus 389 ~~~g~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (438)
.+. .|.. . +....+...+..|.+.+++.++...
T Consensus 407 ~iV---vd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 407 AVV---SDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred EEE---EcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 322 2321 1 1122333444455555555555444
No 98
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.94 E-value=3.4e-23 Score=198.53 Aligned_cols=350 Identities=11% Similarity=0.047 Sum_probs=245.0
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccc----ccCcch-HhHHHHH
Q 013707 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKA-MLTLPLT 89 (438)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~-~l~~~~~ 89 (438)
++.+...+..++..+.++.|..+ ..++++..+|.+..+..+...+..|+.|.++| |+|||| .++.+..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~-------v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i 85 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTD-------VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTL 85 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhH
Confidence 45555666677777777777654 45788899999999999999999999999999 569954 5556777
Q ss_pred HHHHHHHHHHhcccch---hHHHHHHHHHhhhhcchhhHhhhhhHhhhccC-CccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 90 LSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
..+++..++...++.+ .+..+++...+.++ +.....+...++..|.. +++||.+..++.....++|..+++.+..
T Consensus 86 ~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 86 ANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM-TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH-HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766665444211 23455566666677 66777778899999999 5899999999877766766555433322
Q ss_pred H-----------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCc
Q 013707 166 F-----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (438)
Q Consensus 166 ~-----------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (438)
. .+|+....+.+++..+..+...+..||.+++++.+ .+.+++.+
T Consensus 165 ~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~-------------------------~~~~~~~~ 219 (473)
T PRK10429 165 PFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV-------------------------SAEGSHLT 219 (473)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc-------------------------cccccCCC
Confidence 1 24566666666665555555555566653221110 00011235
Q ss_pred hhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013707 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (438)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (438)
.++.++.+++||.++..+...++..........+.+.|.+...+ ++...+.+.....+..+++. ++.+++.||+|+|+
T Consensus 220 ~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gkk~ 297 (473)
T PRK10429 220 LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHH
Confidence 67777777788888888888887777777666776666665433 55566777776667778877 77889999999999
Q ss_pred HHHHHHHHHHHHHHHhHh-----cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCC-------CCcchhHHHHHhhHhh
Q 013707 315 LLSLGLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISS 381 (438)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ 381 (438)
.+..+..+..++.+.+.. ..+.+..++ ..+.+++.+...+...++++|..| .+..|..+|..+....
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K 377 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK 377 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH
Confidence 988887766655544432 122333333 466778888888888899998866 3334669999999999
Q ss_pred hhhhhhhHhHHHHHHHHh
Q 013707 382 FANIVSPLIFSPLTALFL 399 (438)
Q Consensus 382 ~g~~~g~~~~g~l~~~~~ 399 (438)
++..+++.+.|.+.+..+
T Consensus 378 ~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 378 GGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999998754
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=2e-23 Score=200.47 Aligned_cols=372 Identities=11% Similarity=0.038 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-cCcchHhH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT 85 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~ 85 (438)
+|.++.++...+...++.....+.++.|.++ +++.+..+.+++.+.+........++.|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-------~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVK-------QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 3467778888888888888888888888864 445555666777777666666666789999999 59999999
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccc--hhHHHHHHHHHHHhhhhhhHhh
Q 013707 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ--RASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~l 163 (438)
.+.++.+++..+++++++. .+.+++.|.++|+ +.|...+...+++.|++|+++ |..++++...+.++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gi-g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAV-GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHH-hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999888887531 5567788999999 888888888999999998653 4567888899999999999998
Q ss_pred hHHh----hHHHHHHHHHHHHHHHHH---HHHHhcccCCCCCC-CCCCCcccchhc---------cccccCCCCCCCCCc
Q 013707 164 ARFL----STTSAFQAATIVSMLAAA---YMRVFLKDDVPNDD-DDDLTRPIITEE---------TEGVNQNESNSPVKI 226 (438)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 226 (438)
++++ |||+.|++.++...+..+ .....++|..++.+ ++.|..+..... ......+. +.....
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQ-EIARMA 248 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcc-hHHHHH
Confidence 8874 899999988754443322 22333444322111 111111110000 00000000 000000
Q ss_pred cccc----cCCchhHHH--HhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHh--HcCCCh------hHHHHHHHHHH
Q 013707 227 PVCK----KIPSIRDLI--CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA--QFHFNK------NQFADLMLIAG 292 (438)
Q Consensus 227 ~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~------~~~~~~~~~~~ 292 (438)
.... .....++.. +...++| ....+ ..++....+.......|.++.. ..+.+. ...+++.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~ 326 (500)
T PRK09584 249 LGVVALGIVVIFGKEAFAMKGAARRK-MIVAF-ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNP 326 (500)
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHH-HHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhH
Confidence 0000 000000000 0011122 22222 2223333334444444444332 111111 11355566666
Q ss_pred HHHHHHHHHHH----HHHHHhhchhhHHHHHHHHHHHHHHHhHhccc---------c-hHHHHHHHHHhhhhhhHHHHHH
Q 013707 293 LAGTISQLLFM----PLLAPILGEAKLLSLGLFAACINMFICSISWS---------A-WVPYATTAFSVLVVFATPSFRS 358 (438)
Q Consensus 293 ~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~ 358 (438)
+..++.. ++. +++.||.+..+.+.+|+++.+++++.+....+ . |......+.+++.....|...+
T Consensus 327 i~iil~~-p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s 405 (500)
T PRK09584 327 FWIMIGS-PILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLA 405 (500)
T ss_pred HHHHHHH-HHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5555555 343 44555555667788999999999888766543 2 3333368889999999999999
Q ss_pred HHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 359 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 359 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
++.+..|++.||+++|....... +|+.+.|.+.+
T Consensus 406 ~~~~~aP~~~rg~~~g~~~l~~a----~g~~~~g~~~~ 439 (500)
T PRK09584 406 MVAQLVPQRLMGFIMGSWFLTTA----GAALIAGYVAN 439 (500)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 99999999999999996655555 44445555544
No 100
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.93 E-value=4.2e-25 Score=216.45 Aligned_cols=298 Identities=12% Similarity=0.144 Sum_probs=217.9
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHH
Q 013707 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (438)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~ 95 (438)
..+...+..+...+.++.+.+ +++++..+.|++.+.+.+++.++.++.|+++||+|||+.+.++.++.++++
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek--------~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIER--------RFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhh--------hhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 444455555677777777744 567778889999999999999999999999999999999999999999999
Q ss_pred HHHHhcc----------------------------c--------------------chhHHHHHHHHHhhhhcchhhHhh
Q 013707 96 AILAYRR----------------------------S--------------------ISFFYAYYALRTLTAMVCEGSINC 127 (438)
Q Consensus 96 ~~~~~~~----------------------------~--------------------~~~~~~l~~~r~l~G~~~~~~~~~ 127 (438)
+++++.+ + ...+..++++|+++|+ +.+...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~Gi-G~~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGI-GATPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhc-cCCcchh
Confidence 9887763 0 0025678899999999 8899999
Q ss_pred hhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh--------------------------hHHHHHHHHHHHHH
Q 013707 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 181 (438)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--------------------------~w~~~f~~~~~~~~ 181 (438)
...+++.|++|+++|++.+++......+|..+|+++++.+ +|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888752 27778888888876
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhh
Q 013707 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (438)
Q Consensus 182 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
+..+. ++.+|++.++..++.+.+...+ +..++.++ ..+........+..+..+.+.++|.++...+..++....
T Consensus 272 l~~v~-l~~~p~~lp~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 272 LTSIP-FFFFPKALPKEGKRVNVDVHET----EKLEKSED-KSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHH-HHhCccccCCcccccchhhhhh----hccccccc-ccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 66544 4556665432211100000000 00000000 000000001112223344577889999999999999999
Q ss_pred hchhhHHHHHHHHhHcCCChhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHH
Q 013707 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI 329 (438)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 329 (438)
...+.+++|.|+++++|+++.+++.+.....+. .+++. ++.|+++||++ .|+.+..+.....++.+.
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877764 45655 88899999987 466777777666666444
No 101
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=1.1e-22 Score=192.77 Aligned_cols=362 Identities=14% Similarity=0.079 Sum_probs=249.2
Q ss_pred HhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHh
Q 013707 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (438)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~ 100 (438)
++........++.+..|. |.+ ....|+.+...++..+..++.|+++|.||||.+++.+.++..++.++++.
T Consensus 57 ~~~~~~~a~~l~~I~~di---G~~------~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 57 YFVLVLPASILPYINADI---GGS------DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHhccHHHHHHHHHhc---CCC------ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 334444456667665543 221 23367888889999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHH
Q 013707 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAA 176 (438)
Q Consensus 101 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~ 176 (438)
++| ...++.+..+.|+ +.|... .....++|..|.|.|....+............||.++..+ +|||.|++.
T Consensus 128 A~~---~~~~iag~~l~Gv-gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~ 202 (599)
T PF06609_consen 128 AQN---MNTFIAGMVLYGV-GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIF 202 (599)
T ss_pred CCc---HHHHHHHHHHHHH-hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHH
Confidence 999 9999999999999 766665 5677799999999998888777766655556677777654 799999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCCC--cccchhcc--------------------ccc-cCCCCCCCCC--------
Q 013707 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLT--RPIITEET--------------------EGV-NQNESNSPVK-------- 225 (438)
Q Consensus 177 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------------------~~~-~~~~~~~~~~-------- 225 (438)
.+...+.++...++...+++++.+.++. ++..++.+ ... ..+++..+.-
T Consensus 203 ~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~ 282 (599)
T PF06609_consen 203 IIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV 282 (599)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH
Confidence 8887776655444333222221111111 11111110 000 0111111110
Q ss_pred --------ccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChh---HHHHHHHHHHHH
Q 013707 226 --------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLA 294 (438)
Q Consensus 226 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~ 294 (438)
|.....++++-+ .+.++++|.+...++..++.+..++....+.|......++-|+. +.++.....+++
T Consensus 283 ~Lv~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg 361 (599)
T PF06609_consen 283 LLVAFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFG 361 (599)
T ss_pred HHHHHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHH
Confidence 111111122222 23344456677777777888888888888889888887777663 456777777888
Q ss_pred HHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHhHhc--ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcch
Q 013707 295 GTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQG 370 (438)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 370 (438)
..++. .+.+.+.+++++ |+.++.+..++.+++-.++.. ++....+. .++.+++.+..........+-..|+++.|
T Consensus 362 ~~~g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig 440 (599)
T PF06609_consen 362 SCAGA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIG 440 (599)
T ss_pred HHHHH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHH
Confidence 77777 667788888877 555567776666655555443 23323333 67778888888888888888889999999
Q ss_pred hHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 371 KAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 371 ~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
++.|+..+++.+|+.+|..+...++..-
T Consensus 441 ~a~gL~~s~R~~GGsIg~aIy~~I~~n~ 468 (599)
T PF06609_consen 441 TATGLTGSIRSIGGSIGYAIYNAIFTNK 468 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 9999999999999999999998887653
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.93 E-value=1.6e-22 Score=193.16 Aligned_cols=346 Identities=12% Similarity=0.002 Sum_probs=233.4
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc----CcchHh-HHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY----GRKAML-TLPL 88 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grk~~l-~~~~ 88 (438)
.++.+...+..++..+.++.|..+ ..+++..+.|.+.+...+...+..++.|+++||. ||||.+ ..+.
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~-------~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~ 86 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTD-------VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGT 86 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHH
Confidence 345556667777777878777654 4577788999999999999999999999999996 777765 4555
Q ss_pred HHHHHHHHHHHhcc-cc---hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC-ccchhHHHHHHHHH-----HHhhhh
Q 013707 89 TLSIIPLAILAYRR-SI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGV-----LSASFV 158 (438)
Q Consensus 89 ~~~~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~g~~ 158 (438)
+...+...+....+ .. ......+....+.++ +.+...+...++..|..+ ++||.+..+....+ ..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~ 165 (448)
T PRK09848 87 APLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL-CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFL 165 (448)
T ss_pred HHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH-HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444444332112 10 112334455566777 667777777787777775 46788876665543 234556
Q ss_pred hhHhhhHHhh------HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccC
Q 013707 159 CGTLAARFLS------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (438)
Q Consensus 159 ~g~~l~~~~~------w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (438)
++|.++...+ |.....+.+++..+..++.....||+++++.+ +
T Consensus 166 ~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-------------------------------~ 214 (448)
T PRK09848 166 IGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-------------------------------Q 214 (448)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-------------------------------C
Confidence 6676654421 11111222233333323333344554321111 0
Q ss_pred CchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 013707 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (438)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (438)
.+.++.++.+++||.++...+..++............|.|.++.+|.++...+.......++.+++. ++.+++.||+++
T Consensus 215 ~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~r~g~ 293 (448)
T PRK09848 215 PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMVARIGK 293 (448)
T ss_pred CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCc
Confidence 1334445557788888888888888877777777778888888888877654444444345566666 778899999999
Q ss_pred hhHHHHHHHHHHHHHHHhHhcc--cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCC-------cchhHHHHHhhHhhh
Q 013707 313 AKLLSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN-------EQGKAQGCISGISSF 382 (438)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~ 382 (438)
|+.+..+..+..++.+.+.+.+ +.+.... ..+.+++.+...+...+...|..|++ ++|...|+.+..+.+
T Consensus 294 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl 373 (448)
T PRK09848 294 KNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC 373 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH
Confidence 9999999988888877776644 2333333 56678888888899999988888754 359999999999999
Q ss_pred hhhhhhHhHHHHHHHHh
Q 013707 383 ANIVSPLIFSPLTALFL 399 (438)
Q Consensus 383 g~~~g~~~~g~l~~~~~ 399 (438)
|..+|+.+.|.+.+..+
T Consensus 374 g~aig~~i~g~~l~~~G 390 (448)
T PRK09848 374 GQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998754
No 103
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=2.8e-23 Score=183.82 Aligned_cols=376 Identities=13% Similarity=0.078 Sum_probs=280.6
Q ss_pred hhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhH-HHHHHHHHHHHHHHhccc
Q 013707 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRS 103 (438)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~-~~~~~~~~~~~~~~~~~~ 103 (438)
-+....+|.|.++....+..+..-+....|...++..+...+.+|+.|.++|+.|+||... ....+..++.....+.++
T Consensus 32 ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~ 111 (438)
T COG2270 32 IVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP 111 (438)
T ss_pred eeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC
Confidence 4556678888888655433333444567899999999999999999999999999766655 555566667777777776
Q ss_pred chhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh------hH------------
Q 013707 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA------AR------------ 165 (438)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l------~~------------ 165 (438)
.+.++..++.-.+..+ +........++++.|..++++-++..+.-.....+|..+--+. .+
T Consensus 112 ~s~~~~~l~~~il~~i-~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l 190 (438)
T COG2270 112 GSYLLLLLLFLILASI-GFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGL 190 (438)
T ss_pred CchHHHHHHHHHHHHH-hcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeecc
Confidence 4446777777788888 7777788899999999998877776555444444443332111 11
Q ss_pred ----HhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHh
Q 013707 166 ----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (438)
Q Consensus 166 ----~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (438)
-..-|..+.+.++-.++..+..++..|+.++...+. .+...+..+..++.++.
T Consensus 191 ~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-----------------------~~~l~~g~k~L~~t~k~ 247 (438)
T COG2270 191 PPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-----------------------PTALRNGFKELKSTFKE 247 (438)
T ss_pred CccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-----------------------hHHHHHHHHHHHHHHHH
Confidence 013477777777777777677666676665422110 00111111234445666
Q ss_pred hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
.++++++...++..+++.-+..+.......|....+|++..+...+.....+.++++. ++.|++.||+|.|+++..+.+
T Consensus 248 i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 248 IRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred HhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHH
Confidence 8888999999999999999999999999999998899999999999999999999999 888999999999999999998
Q ss_pred HHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 322 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
+..+..+...+.......+. ..+.|...+..+....++..+.+|+++.++.+|+++..+..+..+||.+.+.+.+.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 88887777766666555555 58889999999999999999999999999999999999999999999999999998664
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 013707 401 KGAPFNFPGFSIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
.. ..+....++.++++....+.+.+
T Consensus 407 ~r-------~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 SR-------AGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hh-------hHHHHHHHHHHhhHhhEEeecCC
Confidence 32 22233445555555555554443
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=2.2e-22 Score=191.77 Aligned_cols=336 Identities=13% Similarity=0.056 Sum_probs=228.2
Q ss_pred hhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----cCcchH-hHHHHHHHHHHHHHH
Q 013707 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM-LTLPLTLSIIPLAIL 98 (438)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~-l~~~~~~~~~~~~~~ 98 (438)
.......++.|.. ++.++++.+.|.+.++..+...+..|+.|.++|| +||||. ++.+.+..+++..+.
T Consensus 25 ~~~~~~~l~~~~t-------~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~ 97 (444)
T PRK09669 25 WQTVMLFLAYFYT-------DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT 97 (444)
T ss_pred HHHHHHHHHHHHH-------HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 3444455555544 3678889999999999999999999999999998 788555 446667777776665
Q ss_pred Hhcccc---hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccC-CccchhHHHHHHHHHHHhhhhhhHhhh----HH----
Q 013707 99 AYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAA----RF---- 166 (438)
Q Consensus 99 ~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~----~~---- 166 (438)
...|+. ..+..+++...+.+. +.........++.+|+. +++||++..++......+|..+++.+. ..
T Consensus 98 f~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~ 176 (444)
T PRK09669 98 FYTPDFGATGKIIYACVTYILLSL-VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKG 176 (444)
T ss_pred HhCCCCCcchHHHHHHHHHHHHHH-HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 555542 124555666666676 55566667789999998 468899988888888778777665432 22
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhc
Q 013707 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (438)
Q Consensus 167 ---~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (438)
.+|+..+.+.+++..+..+..++..+|.++++++ ++.+.++..+..+
T Consensus 177 ~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~------------------------------~~~~~~~~~~~~~ 226 (444)
T PRK09669 177 DEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD------------------------------NSSSVWKDLKLLL 226 (444)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc------------------------------CCCCHHHHHHHHh
Confidence 2677778777777666655555555554222110 0012334455567
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
+||.++..++..++............+.|.++..+ ++...+.+.....+..+++. ++.+++.||+|+|+....+....
T Consensus 227 ~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~~~~~~~~~ 304 (444)
T PRK09669 227 GNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRAFKWTIVAF 304 (444)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHHHHH
Confidence 78888877777666655555555555555555443 23333444444455556665 77889999999999888877665
Q ss_pred HHHHHHhHh-c-ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCC-------CcchhHHHHHhhHhhhhhhhhhHhHHH
Q 013707 324 CINMFICSI-S-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCISGISSFANIVSPLIFSP 393 (438)
Q Consensus 324 ~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~g~~~~g~ 393 (438)
.+......+ . ++.+..++ .++.+++.+...+..++++.|..+. +..|..+|..+....+|.++|+.+.|.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 305 VILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543333222 2 23333333 5677888999999999999988752 334678899999999999999999999
Q ss_pred HHHHHh
Q 013707 394 LTALFL 399 (438)
Q Consensus 394 l~~~~~ 399 (438)
+.+..+
T Consensus 385 ll~~~G 390 (444)
T PRK09669 385 ILAWVD 390 (444)
T ss_pred HHHHcC
Confidence 999754
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.93 E-value=3.1e-23 Score=196.68 Aligned_cols=324 Identities=15% Similarity=0.120 Sum_probs=255.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccc----ccCcchHhH-HHHHHHHHHHHHHHhc-c-cch---hHHHHHHHH
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT-LPLTLSIIPLAILAYR-R-SIS---FFYAYYALR 114 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~l~-~~~~~~~~~~~~~~~~-~-~~~---~~~~l~~~r 114 (438)
..++++...|.+..+..+..++..|+.|.++| |+||||.++ ++....+++..++... | +.+ ....+.+..
T Consensus 31 ~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~ 110 (428)
T PF13347_consen 31 VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFY 110 (428)
T ss_pred HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHH
Confidence 55888899999999999999999999999999 899877655 6778888887777766 4 211 133456666
Q ss_pred HhhhhcchhhHhhhhhHhhhccCC-ccchhHHHHHHHHHHHhhhhhhHhhhH----Hh-------hHHHHHHHHHHHHHH
Q 013707 115 TLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAAR----FL-------STTSAFQAATIVSML 182 (438)
Q Consensus 115 ~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~----~~-------~w~~~f~~~~~~~~i 182 (438)
++..+ +.........++.+|.++ ++||.+..+.-+....+|..+.+.+.. .+ +|++..++.+++.++
T Consensus 111 ~l~~~-~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v 189 (428)
T PF13347_consen 111 ILFDI-AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLV 189 (428)
T ss_pred HHHHH-hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHH
Confidence 66777 777777788999999998 579999999988888888754433332 21 588888888888888
Q ss_pred HHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhh
Q 013707 183 AAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSE 262 (438)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (438)
..++..+..||++++.+++ +++.+.++.++.+++||.++...+..++.....
T Consensus 190 ~~~i~~~~~ke~~~~~~~~----------------------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 190 FFLITFFFVKERSVEVTEQ----------------------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred Hhhhhhheeeecccccccc----------------------------ccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 8778788888822221111 112244555666888999999999999988888
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc--cchHHH
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVPY 340 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 340 (438)
.......+.|.++..|.+ ...+.+.....+..+++. ++.++++||+|+|+....+..+.+++.+.+.+.+ +.+..+
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVL 319 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 888889999999988877 455777777788888877 7889999999999999999999999988887775 555555
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCC-------CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
+ ..+.+++.+.......++..|..+. ++.|...|..+....++..+++.+.+.+.+..+
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 5 6788999999999999999888763 446999999999999999999999999998754
No 106
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.8e-23 Score=180.15 Aligned_cols=370 Identities=15% Similarity=0.056 Sum_probs=245.2
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcch
Q 013707 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (438)
Q Consensus 43 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (438)
+..++.+..+..++......+..+++..||..+|++|||+.+........+...+.+.++| +..+++.|.+.|+ |.
T Consensus 105 ~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~-g~ 180 (528)
T KOG0253|consen 105 DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGF-GV 180 (528)
T ss_pred HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhc-cC
Confidence 3456677888899999999999999999999999999999999999999999999999999 9999999999999 77
Q ss_pred hhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013707 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (438)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 198 (438)
|. .|...++-.|..|..+|...+-.. ..+.+|.+....++.. +||||.....+.+..+. ....+.+||+|+-.
T Consensus 181 gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~-a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFA-ARFLVWVYESPRFY 257 (528)
T ss_pred CC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH-HHHHhhcccCcchh
Confidence 77 788999999999998888776666 7888888887766643 59999888887664443 44567899999854
Q ss_pred CCCCCCcccch---hccccccC---------------CCCCCCCCc----cccccCCchhHHHHhhcccchhHHHHHHHH
Q 013707 199 DDDDLTRPIIT---EETEGVNQ---------------NESNSPVKI----PVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (438)
Q Consensus 199 ~~~~~~~~~~~---~~~~~~~~---------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (438)
-.+.+..++.+ +..+.+.. ++++...++ ..++.+....+.+..-.++.+ .......|
T Consensus 258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrktt-lllw~iwf 336 (528)
T KOG0253|consen 258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTT-LLLWRIWF 336 (528)
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHH-HHHHHHHH
Confidence 43333333322 22211111 111111111 111112233332221111111 11222222
Q ss_pred HHHhhhchhh-----------------HHHHHHHHhHcC--C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHH
Q 013707 257 FSGLSEGGMQ-----------------ASFLYFLKAQFH--F-NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (438)
Q Consensus 257 ~~~~~~~~~~-----------------~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (438)
...+.+++.. ...|.+.+...+ . +..+.-- .....+....|. ++.+++.||+|||+.+
T Consensus 337 gnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd-llitslaefPGl-LIt~~iverlGRKkTM 414 (528)
T KOG0253|consen 337 GNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD-LLITSLAEFPGL-LITGVIVERLGRKKTM 414 (528)
T ss_pred hhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH-HHHHHHhhCCch-hHHHHHHHHhcchhHH
Confidence 2222222222 222333332111 1 1111111 223455566666 8889999999999999
Q ss_pred HHHHHHHHHHHHHhHhcccch-HHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 317 SLGLFAACINMFICSISWSAW-VPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
..++++.++..++.....+.. .....+..-++....+...+.|..|.+|...|+++.|.++.+..+|+++.|.++ ...
T Consensus 415 al~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~ 493 (528)
T KOG0253|consen 415 ALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRA 493 (528)
T ss_pred HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHh
Confidence 999999998888776655433 223345556677777888899999999999999999999999999999999988 322
Q ss_pred HHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 013707 396 ALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
+. ....+..+.+.+++++.+...+..-+
T Consensus 494 e~---------s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 494 EL---------STSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred cc---------ceeehHHHHHHHHHHHHHHheeeeec
Confidence 22 23344555666666666665554433
No 107
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=4.8e-22 Score=185.00 Aligned_cols=374 Identities=32% Similarity=0.525 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccch-hhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECS-LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
..+....++..++.++..+..........+...++.+ .+....+.-.....+...+.++..|.++||+|||..+.....
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3455566677777777776665555443322222221 112223333334478889999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhh-cchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAM-VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
...+..+...+... |.++ +.++ ++.+.......++++|...+++|...+|+.+.....+..++|.++++.
T Consensus 101 ~~~l~~~~~~~~~~----~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 101 GTILPALCLLFQGY----WFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHHhHHHHHHHHH----HHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888877777662 3322 3333 123456677899999999999999999999999999999999998874
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcc
Q 013707 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (438)
Q Consensus 168 ---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (438)
+.-.+|++..+..++..++...++||+.+++++++ . ...+............+..+...+ ..+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 238 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-A------------TLRELTPGSLDSSHVADAFQSLTK-VGP 238 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-c------------cccccCCCcccchhhhhhhhhhcc-cCC
Confidence 66788999999999999999999999977665541 0 000000000111111112222111 334
Q ss_pred cchhHHHHHHHHHHHhhhch-hhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGG-MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
+|..+.+....++....... .....+.|++..++|++.+.+.+.+..+....+++.+..+.+.+.++.++.+..|....
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~ 318 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSE 318 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHH
Confidence 45555544444444443332 23245788888999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCC
Q 013707 324 CINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 403 (438)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~ 403 (438)
.+..+.+++..+.|..+.............|...+..+..++++++|+++++...+..+...++|.+.+.++..+.+...
T Consensus 319 ~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~~ 398 (463)
T KOG2816|consen 319 FLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDLP 398 (463)
T ss_pred HHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhcc
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999998776655
Q ss_pred CCC
Q 013707 404 PFN 406 (438)
Q Consensus 404 ~~~ 406 (438)
+..
T Consensus 399 ~~~ 401 (463)
T KOG2816|consen 399 GFL 401 (463)
T ss_pred ccc
Confidence 443
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=2.5e-22 Score=191.27 Aligned_cols=391 Identities=12% Similarity=0.023 Sum_probs=250.2
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccC-----cchHhHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLTLP 87 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~l~~~ 87 (438)
+....+..++. ++....++.+.++ +++++..+.+...+...++..+-. ++|+++||++ ||+.++++
T Consensus 31 ~~~~y~~qGl~-~l~~~~~~~~l~~-------~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~ 101 (468)
T TIGR00788 31 GLQVLFVKGIA-GLMRLPLSPMLTD-------DLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLS 101 (468)
T ss_pred HHHHHHHhhHH-HHhhhhhhHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHH
Confidence 33344555555 5555555555543 568888899899999999999855 4999999997 67777777
Q ss_pred HHHHH-HHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHH---HHHHHHHHhhhhhhHhh
Q 013707 88 LTLSI-IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF---GILLGVLSASFVCGTLA 163 (438)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~l 163 (438)
.++.. +.....+..++ ......+..++.++ +.+...++..++..|..+ |++.... +......++|.++|+.+
T Consensus 102 ~~l~~~~~~~~l~~~~~--~~~~~~~~~~l~~~-~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 102 GLLGSAILYGLLPGKVS--SAKVAAAFIFLAAL-AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHHHHhcccccc--hHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 66653 33333333334 13344457888999 889999999999999998 5444432 23333344677777777
Q ss_pred hHH----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHH
Q 013707 164 ARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (438)
Q Consensus 164 ~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (438)
++. ++|+..|++.+.+.++. .....++||+++...++.+.+. . ...............+..++..
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~l~ 246 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYL-------E---MNMALLTLGVLANVKVQILGLR 246 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccc-------h---hhhhhhhhhHHHHHHHHHHHHH
Confidence 766 48999999998887666 4445677886421111100000 0 0000000000000111233434
Q ss_pred HhhcccchhHHHHHHHHH-HHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q 013707 240 CLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (438)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (438)
+. .++|.++...+..++ +........... .+..+.+|+++.+.|......+++.+++. ...+++.+|++.|+++.+
T Consensus 247 ~~-l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~~l~~ 323 (468)
T TIGR00788 247 GA-IQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRLLFGV 323 (468)
T ss_pred HH-HhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHHHHHH
Confidence 44 455667665555555 332222222211 13334589999999999999999999988 777888899999999999
Q ss_pred HHHHHHHHHHHhHhc----------ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhh
Q 013707 319 GLFAACINMFICSIS----------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 387 (438)
Q Consensus 319 ~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 387 (438)
+.++.+++.+..... ++.+.... ..+.+++.+........++++..|++.+|+.+++.+.+.++|..++
T Consensus 324 ~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~ 403 (468)
T TIGR00788 324 TTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVS 403 (468)
T ss_pred HHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHH
Confidence 999888877554321 22222222 5677888888888889999999999999999999999999999999
Q ss_pred hHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 013707 388 PLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLS 430 (438)
Q Consensus 388 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (438)
+.++|.+.++.+.....+.......++..+..++.+.....+.
T Consensus 404 ~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP 446 (468)
T TIGR00788 404 GFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLP 446 (468)
T ss_pred HHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998763333332223334444455555555554333
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.91 E-value=3.4e-21 Score=173.45 Aligned_cols=259 Identities=12% Similarity=0.094 Sum_probs=200.0
Q ss_pred HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH--------------------
Q 013707 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-------------------- 166 (438)
Q Consensus 107 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-------------------- 166 (438)
++.++++-++.|. |.+...+..+.++++..|+|++++.+++.+..+++|.++||.+++.
T Consensus 10 ~~~~l~~~f~~g~-G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLAS-GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHh-hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8999999999999 9999999999999999999999999999999999999999999874
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhccc
Q 013707 167 LSTTSAFQAATIVSMLAAAYM-RVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (438)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (438)
.+|+++|++.+.+..+..+.. ...+||.+++++++ ...++. ...++ ..++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~--------------------~~~~~~-----~~~~~----~~~~ 139 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVAR--------------------VSSGDT-----TQKTS----AFQF 139 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccc--------------------cccccc-----cchhh----HHhh
Confidence 258899997666544443322 22334432111100 000000 00011 3346
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
|.++...+..+++.....+...+.+.|+++. +|+++.+.+...+....+.++++ ++.+++.||+++++.+..+..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHH
Confidence 6677777888888888999999999999864 69999999999999999999999 88899999999999888888887
Q ss_pred HHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 324 CINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.++.++....++....+...+.+++.+..+|...+...+..|+ +.+++.++. ....+|++++|.+.|.+.|..
T Consensus 219 ~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 219 VLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 7777666555544444456678999999999999999988874 456777765 677899999999999999973
No 110
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.90 E-value=6.4e-20 Score=163.26 Aligned_cols=360 Identities=15% Similarity=0.084 Sum_probs=264.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccC-----cchHhHH-HHHHHHHHHHHHHhc-----c-------cc-
Q 013707 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLTL-PLTLSIIPLAILAYR-----R-------SI- 104 (438)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~l~~-~~~~~~~~~~~~~~~-----~-------~~- 104 (438)
.|++++....+.+.++..+.+. ..+.+|..||+.+ ||..+++ +......+..+.+++ . +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 4778888899999998887766 6899999999999 8887765 555555555544432 2 11
Q ss_pred hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----h-HHH--HHHHHH
Q 013707 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S-TTS--AFQAAT 177 (438)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~-w~~--~f~~~~ 177 (438)
.......+.-.+.|+ +.+...+...++++|..|+|+|+++.++...+.-+|.+++..+.+.+ + -|. .+...+
T Consensus 87 ~g~~~a~l~F~l~G~-G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 87 LGLALAALAFLLYGL-GVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHh-hHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 112345566677888 78888888999999999999999999999999999999998888764 1 122 222233
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHH
Q 013707 178 IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFF 257 (438)
Q Consensus 178 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (438)
.+.++..++..+. .|++.++..+ ...+++.++++.++.+..+|..+..+...++
T Consensus 166 ~i~~~l~~ia~wg-~E~r~~~~~~-------------------------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l 219 (403)
T PF03209_consen 166 LIALLLNLIALWG-QEPRRSRRAA-------------------------AAERPRPPFREAWRQVWASPQARRFFVFLFL 219 (403)
T ss_pred HHHHHHHHHHHHh-cccCCccccc-------------------------CCCCCCccHHHHHHHHHhCCChhHHHHHHHH
Confidence 3322222222222 2222211110 1122334677777778889999999999999
Q ss_pred HHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhchhhHHHHHHHHHHHHHHHhHhc---
Q 013707 258 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-ILGEAKLLSLGLFAACINMFICSIS--- 333 (438)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (438)
..+++......+-+|--|++|++..+...+....+.+..++. ...+++.. |.++++....++....+++.++..+
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~ 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999988887 55565554 7788888888888888887776553
Q ss_pred ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCC--CCCCCCch
Q 013707 334 WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG--APFNFPGF 410 (438)
Q Consensus 334 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~--~~~~~~~~ 410 (438)
.+.+.+-. .+++|++.+.......+.+.+..++++.|..+|.-...+.++..++..++|.+.|...... .+...++.
T Consensus 299 ~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~ 378 (403)
T PF03209_consen 299 GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGV 378 (403)
T ss_pred ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHH
Confidence 35555555 7889999999999999999999999999999999999999999999999999999754322 23334445
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh
Q 013707 411 SIMCIGLASVRAFTYELLLSFY 432 (438)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
.|.+=++..++++.+...+.++
T Consensus 379 VF~lEa~ll~~a~~ll~~l~~~ 400 (403)
T PF03209_consen 379 VFALEAVLLLAALVLLGRLDRR 400 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhhhh
Confidence 6666666666666555544443
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=99.90 E-value=4.8e-20 Score=176.10 Aligned_cols=374 Identities=10% Similarity=0.021 Sum_probs=248.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc------ccchhHHHHHHHHHhhh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------RSISFFYAYYALRTLTA 118 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~G 118 (438)
+++.+..+.+++.+.. .....++++.|+++||+|||+++.++.++..+++++++++ ++ ++.+++.|++.|
T Consensus 56 ~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G 131 (591)
T PTZ00207 56 RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMT 131 (591)
T ss_pred HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHH
Confidence 5566667778877764 3445677789999999999999999999999999999987 46 899999999999
Q ss_pred hcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhh-hHhhhHHh--hHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 013707 119 MVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC-GTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
+ +.+...+.....+.+++| ++||++.|+.....++|..+ +++..+++ +|+..|++.+++.++..++...++++++
T Consensus 132 ~-G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 132 L-GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred H-HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 9 888888888999999997 78999999999999999975 56666555 7899999998888887777777776665
Q ss_pred CCCC--CC---CCCccc--------------------------------------ch----h------------c-----
Q 013707 196 PNDD--DD---DLTRPI--------------------------------------IT----E------------E----- 211 (438)
Q Consensus 196 ~~~~--~~---~~~~~~--------------------------------------~~----~------------~----- 211 (438)
.+.. ++ ++.++. .+ . .
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~ 289 (591)
T PTZ00207 210 FHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVI 289 (591)
T ss_pred chhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3221 00 111110 00 0 0
Q ss_pred -----------cccccC-C-CCCCCC----------Ccc-----ccc-cCCchhHHHHhhcccchhHHHHHHHHHHHhhh
Q 013707 212 -----------TEGVNQ-N-ESNSPV----------KIP-----VCK-KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSE 262 (438)
Q Consensus 212 -----------~~~~~~-~-~~~~~~----------~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (438)
+....+ + +.+... .+. +.+ ..+...+.+....++..+|.++...++.....
T Consensus 290 ~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~g 369 (591)
T PTZ00207 290 FPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAH 369 (591)
T ss_pred HHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCch
Confidence 000000 0 000000 000 000 00111112222334667888888888887777
Q ss_pred chhhHHHHHHHHhHcCCCh-hH-HHHHHHHHHHHHHHHHHHHHHHHHHhhch--------hh-HHHHHHHHHHHHHHHhH
Q 013707 263 GGMQASFLYFLKAQFHFNK-NQ-FADLMLIAGLAGTISQLLFMPLLAPILGE--------AK-LLSLGLFAACINMFICS 331 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~-~~~~~~~~~~~~~~~~~ 331 (438)
..+...+....+..-|.+. .+ ...+.+..++.+.+|+ +..|.++....+ |. .+.+..+ +.++.+++.
T Consensus 370 l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GR-l~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~ 447 (591)
T PTZ00207 370 FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGR-LCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLF 447 (591)
T ss_pred heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhH-HHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHH
Confidence 6666666666666326623 32 2226778888888888 777776622111 12 3334444 666666666
Q ss_pred hcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhh-hHhHHHHHHHHhcCCCCC----
Q 013707 332 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS-PLIFSPLTALFLSKGAPF---- 405 (438)
Q Consensus 332 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g-~~~~g~l~~~~~~~~~~~---- 405 (438)
+..+...+++ .++.|++.|...+.....++|++. ++-|+-+-+.....-+|..+- ..++|.+||.-.......
T Consensus 448 ~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G 526 (591)
T PTZ00207 448 LTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTE 526 (591)
T ss_pred HHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCC
Confidence 6554234454 788999999999999999999999 999999888888888887776 678899998754322211
Q ss_pred -CCCchHHHHHHHHHHHHHHHHH
Q 013707 406 -NFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 406 -~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
.-...++++.+.++..+.+...
T Consensus 527 ~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 527 RVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred ceeeHhHHHHHHHHHHHHHHHHh
Confidence 0112356666666666655543
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1e-19 Score=166.73 Aligned_cols=351 Identities=15% Similarity=0.085 Sum_probs=272.0
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----cCcchH-hHHHHH
Q 013707 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM-LTLPLT 89 (438)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~-l~~~~~ 89 (438)
.+.+...+........+..+.. +..++++...|.+..+.-+--++..|+.|.++|| +||+|+ ++.+.+
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYT-------dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYT-------DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHh-------cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3444454555555555555543 4678999999999999999999999999999995 788655 456778
Q ss_pred HHHHHHHHHHhcccc---hhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC-ccchhHHHHHHHHHHHhhhhhh-----
Q 013707 90 LSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCG----- 160 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g----- 160 (438)
..++.+.++..+++. ......++...+.++ +.......-.++.+|.++ ++||.+..++-+...++|..+.
T Consensus 92 p~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l-~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~ 170 (467)
T COG2211 92 PFAIVAVLLFITPDFSMTGKLIYALVTYMLLGL-GYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP 170 (467)
T ss_pred HHHHHHHHHHcCCCcccCcchHHHHHHHHHHHH-HHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888742 225566777788888 888888889999999997 6899999999999888886554
Q ss_pred HhhhHH------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCc
Q 013707 161 TLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (438)
Q Consensus 161 ~~l~~~------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (438)
|++... .||+..-.+.+++..+..+.+++..+|...+..+. +.+.+.+
T Consensus 171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~--------------------------~~~~~~~ 224 (467)
T COG2211 171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT--------------------------KTGVKLK 224 (467)
T ss_pred HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC--------------------------ccccccc
Confidence 332221 37888888888888778778888888876543322 0012235
Q ss_pred hhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Q 013707 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (438)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (438)
+++.+...++||.++..++..++.........+...+|.+..+|.++..............+++. ++.+++.+|+|+|+
T Consensus 225 ~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~~gkk~ 303 (467)
T COG2211 225 LKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKKFGKKK 303 (467)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhchHH
Confidence 56666667889989888888888888888888888999998888888887777777666666656 88899999999999
Q ss_pred HHHHHHHHHHHHHHHhHhcccc--hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCC-------CcchhHHHHHhhHhhhhh
Q 013707 315 LLSLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCISGISSFAN 384 (438)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~ 384 (438)
+...+.++..++.+++.+.+.. +..++ .++.+++.+...+..+++++|.++- +..|...|.+...+.+|.
T Consensus 304 ~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ 383 (467)
T COG2211 304 LFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGL 383 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999998887733 33333 4677888999999999999887643 345889999999999999
Q ss_pred hhhhHhHHHHHHHHhc
Q 013707 385 IVSPLIFSPLTALFLS 400 (438)
Q Consensus 385 ~~g~~~~g~l~~~~~~ 400 (438)
+++..+.|++.+..+.
T Consensus 384 ala~~~~g~~L~~~Gy 399 (467)
T COG2211 384 ALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999998653
No 113
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=9.7e-20 Score=171.26 Aligned_cols=378 Identities=10% Similarity=0.008 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-CcchHh
Q 013707 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAML 84 (438)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l 84 (438)
.+|.++.++...+...++.......+|.|..+ +++.+..+.+.+.+.+.....++.++.|+++||+ ||||++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~-------~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i 79 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTN-------QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV 79 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 35667777778888888888888899999764 3566778889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc--chhHHHHHHHHHHHhhhhhhHh
Q 013707 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGTL 162 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~ 162 (438)
.++.++.+++.++.+..++. ...+.+...+.++ +.|...+...++++|.+|++ +|..++++.....++|..++|.
T Consensus 80 liG~il~~lg~lll~~~~~~--~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIH--PSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 99999999988776654321 1223333333344 44566677789999999875 6888999999999999999999
Q ss_pred hhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-C-CCCCCcccchhc--------ccc----ccCCCCCCCC
Q 013707 163 AARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPND-D-DDDLTRPIITEE--------TEG----VNQNESNSPV 224 (438)
Q Consensus 163 l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~--------~~~----~~~~~~~~~~ 224 (438)
+.+++ ||++.|.+.++..++. ++.+...++..++. . ++++.++..... ... ......++..
T Consensus 157 l~g~L~~~~Gw~~~F~iaaigm~l~-li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
T PRK15462 157 ACGYAQEEYSWAMGFGLAAVGMIAG-LVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEW 235 (493)
T ss_pred HHHHHHhhhChHHHHHHHHHHHHHH-HHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98875 8999999876543333 33222222111110 0 000000000000 000 0000000000
Q ss_pred Cccccc--cCCc---hhHHH-Hhh--cccchh---HHHHHHHHHHHhhhchhhHHHHHHHHhHcCCCh----hHHHHHHH
Q 013707 225 KIPVCK--KIPS---IRDLI-CLL--RSSVTL---SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK----NQFADLML 289 (438)
Q Consensus 225 ~~~~~~--~~~~---~~~~~-~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~ 289 (438)
.....- .... +.... +.. .+++++ ..+++...++...+....+.+..|.++..+.+- ...++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qs 315 (493)
T PRK15462 236 SVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQS 315 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHh
Confidence 000000 0000 00000 000 012222 223333344444455555666777766432220 12356677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhch--h-----hHHHHHHHHHHHHHHHhHhcc---------cchHHHH-HHHHHhhhhhh
Q 013707 290 IAGLAGTISQLLFMPLLAPILGE--A-----KLLSLGLFAACINMFICSISW---------SAWVPYA-TTAFSVLVVFA 352 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~ 352 (438)
.+.+..++.+ ++..++-.|..+ | .=...|+++.+++++.+.+.. +.+.++. ..+..++.-+.
T Consensus 316 lNp~~ii~l~-P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~ 394 (493)
T PRK15462 316 INAFAVMLCG-VFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFI 394 (493)
T ss_pred HhHHHHHHHH-HHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 7777777777 443444344421 1 125678888888877775421 2222333 57788999999
Q ss_pred HHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.|...+.+++..|++.+|+.+|...... .++|+.++|.+.+..
T Consensus 395 sPvgls~~~~laP~~~~g~~mg~w~l~~---~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 395 DPVAMSQITRIEIPGVTGVLTGIYMLLS---GAIANYLAGVIADQT 437 (493)
T ss_pred ChHHHHHHHHhChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 9999999999999999999999884422 245555555555543
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.1e-21 Score=163.22 Aligned_cols=355 Identities=13% Similarity=0.061 Sum_probs=241.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-cCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcch
Q 013707 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (438)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (438)
.+.++...+..++.+.+.....+...+.|++.|| +|-|..-++-+....++.++.+.-.-.+.+|.+..+|++.|+++.
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 3556666677888999999999999999999997 577766555555555666655543222239999999999999444
Q ss_pred hhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh----HhhhHHhh------------HHHHHH-HHHHHHHHHHH
Q 013707 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLS------------TTSAFQ-AATIVSMLAAA 185 (438)
Q Consensus 123 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~l~~~~~------------w~~~f~-~~~~~~~i~~~ 185 (438)
+ .-.+.+.+..-|++.||.+.++|+......+|..+- |.+....+ -...+- ......++++.
T Consensus 152 S-lAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical 230 (459)
T KOG4686|consen 152 S-LAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL 230 (459)
T ss_pred h-hhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 446789999999999999999999999888887653 33332221 111111 11111112111
Q ss_pred HHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchh
Q 013707 186 YMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM 265 (438)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (438)
.. -.-|++.+..-+ .++.. ..++++.+ +.++ -.|.+|.+.+.++++..+...+
T Consensus 231 ~l--g~~D~rAerilh-----------~e~g~-----~Ge~pkLt---dv~~------f~ppfw~~~iicv~yyva~fPF 283 (459)
T KOG4686|consen 231 SL--GLSDDRAERILH-----------LEEGF-----LGEEPKLT---DVNT------FYPPFWVLVIICVLYYVAWFPF 283 (459)
T ss_pred Hh--hhhhhHHHHHHh-----------hhcCc-----ccCCcccc---cccc------cCccHHHHHHHHHHHHHHHHHH
Confidence 11 111111110000 00000 00011111 1111 1456888899999999999999
Q ss_pred hHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH-HHHHHHhHhcccchHHHH-HH
Q 013707 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA-CINMFICSISWSAWVPYA-TT 343 (438)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 343 (438)
.+.-|.++++++|+|+.+++.+.+.......+.+ .+.|.++||.|++.....+..+. ..+-..+.+ +.+..+. +.
T Consensus 284 i~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~ 360 (459)
T KOG4686|consen 284 ITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMT 360 (459)
T ss_pred hhhhHHHHHHhhCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHH
Confidence 9999999999999999999999999888888888 88899999999876655444333 333333322 3344444 67
Q ss_pred HHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHH
Q 013707 344 AFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAF 423 (438)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (438)
++|..........+..+...+|+++.|+++|.++.++++|-++.|.+.|.+.|..++ +.+....++..+.+.+...
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~----y~~le~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS----YDNLEAFFLIIGLMALTSV 436 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc----hhhHHHHHHHHHHHHHHHH
Confidence 778888777777888888899999999999999999999999999999999986433 2345556777777777777
Q ss_pred HHHHhhhhhh
Q 013707 424 TYELLLSFYV 433 (438)
Q Consensus 424 ~~~~~~~~~~ 433 (438)
.+.+...+++
T Consensus 437 gil~~~N~kq 446 (459)
T KOG4686|consen 437 GILFYLNKKQ 446 (459)
T ss_pred HHHhheeccc
Confidence 7777666554
No 115
>PRK11462 putative transporter; Provisional
Probab=99.88 E-value=5.5e-19 Score=168.28 Aligned_cols=342 Identities=11% Similarity=0.013 Sum_probs=227.0
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----cCcchHhH-HHHHH
Q 013707 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAMLT-LPLTL 90 (438)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~l~-~~~~~ 90 (438)
+.+...+...+....+..+.. +..++++...|.+..+.-+--++..|+.|.++|| +||||+++ ++.+.
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt-------~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~ 89 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYT-------DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALP 89 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHH-------HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHH
Confidence 333334444444444555543 3568889999999999999999999999999996 69877665 56677
Q ss_pred HHHHHHHHHhcccch---hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC-ccchhHHHHHHHHHHHhhhhhhHhhhH-
Q 013707 91 SIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAAR- 165 (438)
Q Consensus 91 ~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~- 165 (438)
.+++..++...|+.+ ....+.+...+..+ +.......-.++.+|.++ +|||++..++......+|..+++.+..
T Consensus 90 ~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~-~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p 168 (460)
T PRK11462 90 FGIVCVLAYSTPDLSMNGKMIYAAITYTLLTL-LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776665555311 13345556666677 667777788899999997 789999999999888888777655432
Q ss_pred ---Hh-------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCch
Q 013707 166 ---FL-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (438)
Q Consensus 166 ---~~-------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (438)
.+ +|+....+.+++.+++..+.....||.++++++ +.+.
T Consensus 169 lv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~-------------------------------~~~~ 217 (460)
T PRK11462 169 LVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT-------------------------------TTSM 217 (460)
T ss_pred HHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc-------------------------------CCCH
Confidence 12 466666666666555554444444554321111 1134
Q ss_pred hHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhH
Q 013707 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (438)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (438)
++.++...+||.++......++..............|.+..+|.+ ...+.+.....+.++++. ++.+++.||+++|+.
T Consensus 218 ~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk~~ 295 (460)
T PRK11462 218 REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGS-ALAKPLTDWKCKVTI 295 (460)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHH
Confidence 555666777888877766666666665555566666666655543 344556667777778877 888999999999888
Q ss_pred HHHHHHHHHHHHHHhHhcccc--hHHHH-HHHHHhhhhhhHHHHHHHHhhcCC-------CCcchhHHHHHhhHhhhhhh
Q 013707 316 LSLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANI 385 (438)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~ 385 (438)
...+.....+....+.+.++. +..+. .++.+++.+...+..+++..|..+ .+..|..++..+....+|.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a 375 (460)
T PRK11462 296 FWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA 375 (460)
T ss_pred HHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 765544443333333332222 12222 345566666666666777777665 33346667877899999999
Q ss_pred hhhHhHHHHHHHH
Q 013707 386 VSPLIFSPLTALF 398 (438)
Q Consensus 386 ~g~~~~g~l~~~~ 398 (438)
+++.+.|.+.+..
T Consensus 376 lg~~i~g~iL~~~ 388 (460)
T PRK11462 376 FGGALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999874
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.88 E-value=1.3e-20 Score=172.76 Aligned_cols=361 Identities=17% Similarity=0.215 Sum_probs=252.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCc-chHhH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLT 85 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~l~ 85 (438)
+|.+++..+..++.....+++.|..-+|.++. |.+.+....|++.++..++.+++++..|++..|.++ |++++
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 56788888999999999999999999998853 455566788999999999999999999999999997 99999
Q ss_pred HHHHHHHHHHHHH-Hhcccch-hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 86 LPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
.+.++..++.++. ++..-.+ ..+.++++|++.|+ |.+.. ....+|+++....++|.++++....+..+|.++||.+
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gv-g~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGV-GVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-CcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 9999999999998 4442222 47899999999999 75655 5799999999999999999999999999999999888
Q ss_pred hHHh------h-----------HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCc
Q 013707 164 ARFL------S-----------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 226 (438)
Q Consensus 164 ~~~~------~-----------w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (438)
+..+ | +..+-|+.+++.++..+...++++|.+++..++...+ +++++..++
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~------------~~~~~~~~~ 252 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRS------------VEEEKSDIE 252 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccccccc------------chhhccchh
Confidence 7664 1 2467788888888888888889999877654431100 000000000
Q ss_pred cccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHH----HHHHHHHHHHHHHHHHHH
Q 013707 227 PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQF----ADLMLIAGLAGTISQLLF 302 (438)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~ 302 (438)
..+. +-- +.+..+.++...+...+......+..+......++++.++. |...+..++...... +.
T Consensus 253 ~~~~---~~~-------d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~-l~ 321 (488)
T KOG2325|consen 253 KVKK---PKL-------DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILL-LL 321 (488)
T ss_pred hhcc---CCh-------hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHH-HH
Confidence 0000 101 12234445555555666666666777777777788877765 444444444444433 22
Q ss_pred HHHHH-HhhchhhHHHHHHHHHHHHHHHhHhc----c---------------------------cchHHHH--HHHHHhh
Q 013707 303 MPLLA-PILGEAKLLSLGLFAACINMFICSIS----W---------------------------SAWVPYA--TTAFSVL 348 (438)
Q Consensus 303 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~~~~--~~~~~~~ 348 (438)
..... .++.+|+.+..+++.......+..+. . +.+..+. ..++|.+
T Consensus 322 ~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~ 401 (488)
T KOG2325|consen 322 YIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIA 401 (488)
T ss_pred HHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccc
Confidence 22222 23344555555544333333332210 0 0011112 2445566
Q ss_pred hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 349 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.........+..+|...|.++++..|.++.....+..++|.+...++...
T Consensus 402 ~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 402 FPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred cccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 66667778889999999999999999999999999999999999888874
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.75 E-value=1.4e-15 Score=138.42 Aligned_cols=373 Identities=13% Similarity=0.056 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-CcchHhH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLT 85 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~ 85 (438)
.|.++.++...+-..+++.-....+..|+.....++ ++.+.....-+.+.|.--.-+...+.|+++||+ |+|+.+.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 467788888888899998777777777777654333 667777777777777777777889999999996 9999999
Q ss_pred HHHHHHHHHHHHHHhcc--cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc--chhHHHHHHHHHHHhhhhhhH
Q 013707 86 LPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~ 161 (438)
.+.++.+++.++.+.+. + ...++++-.+.++ |.|..-|...+++.|.+|++ +|-..+++...+.++|..++|
T Consensus 97 lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~i-G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSG---PGGLYIGLALIIV-GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHh-ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 99999999999999885 5 6778888888899 89999999999999999865 467778888888899999998
Q ss_pred hhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC-----Ccccchh--------cccc----ccCCCC
Q 013707 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL-----TRPIITE--------ETEG----VNQNES 220 (438)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~----~~~~~~ 220 (438)
.+.+++ +|+..|.+.++-..+..+. ....|........+++ .+..... .... ..++.-
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~-f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 251 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVI-FLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTF 251 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHH-HHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 887774 8899998887665444333 3333322111111100 0000000 0000 000000
Q ss_pred CCCC-------C----ccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCC----hhHHH
Q 013707 221 NSPV-------K----IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN----KNQFA 285 (438)
Q Consensus 221 ~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~ 285 (438)
.... . ....+..+...+ .+|-.....+++...+++..+....+.+..|..+..+.+ +...+
T Consensus 252 ~~~~~~~~i~~~~~~~~~~~~~~~~~~e----r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~ 327 (498)
T COG3104 252 SGVLLVISILIAIIYFAEAFRSPKVFDE----RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPA 327 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccHHH----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHH
Confidence 0000 0 000000000011 000011222333444444444445555666665432222 12235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchh-------hHHHHHHHHHHHHHHHhHhc-------c---cchHHHH-HHHHHh
Q 013707 286 DLMLIAGLAGTISQLLFMPLLAPILGEA-------KLLSLGLFAACINMFICSIS-------W---SAWVPYA-TTAFSV 347 (438)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~-~~~~~~ 347 (438)
+..+...+..++.+ ++..++..+.+++ .-...+..+++.+++++... + +.+..+. .++.++
T Consensus 328 ~fQslNp~~Iii~~-pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 328 WFQSLNPFFIILFS-PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHhhCHHHHHHHH-HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 66777777777777 4445665553332 23456666666666666553 2 2233333 578899
Q ss_pred hhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
+.-+..|...+++.+..|+...+..++..-.....++.++..+.+
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 999999999999999999988888888888777777777776666
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=7.5e-16 Score=137.73 Aligned_cols=323 Identities=12% Similarity=0.005 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccc---hhHH--HHHHHHHhhhhcchhh
Q 013707 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI---SFFY--AYYALRTLTAMVCEGS 124 (438)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~l~G~~~~~~ 124 (438)
....-|...+|.+.+.....+.-|+.|++|-|...+++..+..++..+-..+..+ +.++ ....+..+.+. ++-.
T Consensus 78 ~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~F 156 (480)
T KOG2563|consen 78 SSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQPF 156 (480)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhhH
Confidence 3455688888999999999999999999999999999999999999888776543 3344 77788888888 7666
Q ss_pred HhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----------hhHHH--HHHHHHHHHHHHHHHHHHhcc
Q 013707 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTS--AFQAATIVSMLAAAYMRVFLK 192 (438)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----------~~w~~--~f~~~~~~~~i~~~~~~~~~~ 192 (438)
....-.-+..-|++++||..+..+-..++.+|..+|-++... ..|.. .|+....+..+.+.+..+..+
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~ 236 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFT 236 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 665556777889999999999988887777777766554433 24543 455555554444444444455
Q ss_pred cCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHH
Q 013707 193 DDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYF 272 (438)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (438)
+.|+.+.... .......++.+..+..++++++....+........++...+.+..-
T Consensus 237 ~~P~tPps~s------------------------~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~ 292 (480)
T KOG2563|consen 237 KKPPTPPSAS------------------------QAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLA 292 (480)
T ss_pred CCCCCCCchh------------------------HhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhc
Confidence 5443222210 0000012455555667778888777666666555555555555544
Q ss_pred HHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHHHHH-HHHhHhcc---cchHHHH-HHHHH
Q 013707 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACIN-MFICSISW---SAWVPYA-TTAFS 346 (438)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~-~~~~~ 346 (438)
+.. -|++....|+......+++++++ .+.|.+.||.++ |.+..+......++ +.+..... ..+.++. ..++|
T Consensus 293 l~~-sgY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g 370 (480)
T KOG2563|consen 293 LCP-SGYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLG 370 (480)
T ss_pred ccc-ccCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHH
Confidence 444 37777788999999999999998 888999999887 44444444444444 22222221 2333333 67888
Q ss_pred hhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 347 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
++.....|...-+..|..-|+.-++-.|+.+...++-+.+-..+.+...+..+
T Consensus 371 ~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 371 FFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred HhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 88888889888888888877888899999999988888888888777766543
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.72 E-value=5.6e-19 Score=168.91 Aligned_cols=374 Identities=15% Similarity=0.200 Sum_probs=2.9
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
++..++..+..+.....++.+ +..++++..+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.++
T Consensus 9 ~~~~~~q~~~~g~~~~~ltti--------ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTI--------ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 333444444445555555555 447789999999999999999999999999999998888888889999999
Q ss_pred HHHHHHhcc----c-------------------------------------------chhHHHHHHHHHhhhhcchhhHh
Q 013707 94 PLAILAYRR----S-------------------------------------------ISFFYAYYALRTLTAMVCEGSIN 126 (438)
Q Consensus 94 ~~~~~~~~~----~-------------------------------------------~~~~~~l~~~r~l~G~~~~~~~~ 126 (438)
+++++++-+ . ...++.+++++++.|+ |+...+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~Gi-G~~pl~ 159 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGI-GATPLY 159 (539)
T ss_dssp -----------------------------------------------------------------------SS-S-----
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhc-cccCCc
Confidence 988765310 0 0025788999999999 899999
Q ss_pred hhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh--------------------------hHHHHHHHHHHHH
Q 013707 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVS 180 (438)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--------------------------~w~~~f~~~~~~~ 180 (438)
+...+|+-|.+++++-+..+|++.+...+|.++|-++++.. .|...|.+.+.+.
T Consensus 160 tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 160 TLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777642 1445566666665
Q ss_pred HHHHHHHHHhcccCCCCCC-CCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHH
Q 013707 181 MLAAAYMRVFLKDDVPNDD-DDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (438)
Q Consensus 181 ~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
++..+... ..|++.++.. .+++.+...++.++...++..+....+...+..+++....+.+.+||.+....+......
T Consensus 240 ~l~aipl~-~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~ 318 (539)
T PF03137_consen 240 FLSAIPLF-FFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFES 318 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-cCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 55544443 4454433321 111100000000000000000000000011111222233344677999999999999999
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHH---hHhc-
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI---CSIS- 333 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~---~~~~- 333 (438)
+...++.++.|-|++.+++.++.+++.+.....+.+...+.+++|.+.+|++ .|+.+....+...++.+. ..+.
T Consensus 319 ~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~ 398 (539)
T PF03137_consen 319 FIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLG 398 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 9999999999999999999999999888877777666555588999999875 355544444444433332 1110
Q ss_pred ------------c----------------------------------c---ch-HHHH-HHHHHhhhhhhHHHHHHHHhh
Q 013707 334 ------------W----------------------------------S---AW-VPYA-TTAFSVLVVFATPSFRSIVSK 362 (438)
Q Consensus 334 ------------~----------------------------------~---~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 362 (438)
. + .. .+.+ .++..+..+..........-+
T Consensus 399 C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR 478 (539)
T PF03137_consen 399 CPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLR 478 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeec
Confidence 0 0 00 1111 122233444445555566678
Q ss_pred cCCCCcchhHHHHHhhH-hhhhhhhhhHhHHHHHHH
Q 013707 363 QVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 363 ~~~~~~~g~~~g~~~~~-~~~g~~~g~~~~g~l~~~ 397 (438)
.+|+++|+.+.|+...+ +-+|.+-||.++|.+.|.
T Consensus 479 ~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 479 CVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------
T ss_pred cCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 99999999999998765 467778899999999996
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.64 E-value=1.4e-13 Score=129.60 Aligned_cols=369 Identities=16% Similarity=0.169 Sum_probs=229.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccc---C--cchHhHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHhhh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY---G--RKAMLTLPLTLSIIPLAILAYRRS-ISFFYAYYALRTLTA 118 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~---G--rk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G 118 (438)
++++++.+.....+...++.. ..+++|.++|.+ | ||+-++++.++.+++...++..++ ..+.....+.-++..
T Consensus 19 ~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~ 97 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLAS 97 (433)
T ss_pred HcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHH
Confidence 667777888888888788776 568899999986 3 455556677777666665555443 112455556667777
Q ss_pred hcchhhHhhhhhHhhhccCC--ccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcc
Q 013707 119 MVCEGSINCLALAYVADNIS--ERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK 192 (438)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~ 192 (438)
+ +.......+.+++.|... +++|+...+.......+|.+++..++|.+ +++..|.+.+++..+..+...+..+
T Consensus 98 ~-g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 98 F-GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred H-HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 7 788899999999999985 34477878888888888988888887764 6788888888777766555556566
Q ss_pred cCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHH-HHHHHHhhhchhhHHHHH
Q 013707 193 DDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASFLY 271 (438)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 271 (438)
|.++.+..+ . ....++..+......++..++.++.+ +.|.++...+ ..++............-.
T Consensus 177 e~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~~~a~~fy 241 (433)
T PF03092_consen 177 ERKVRPADE-V-------------FSFGKEEVPCLFGSFREQLSELWRAL-QQRAIWQPILFFIFFFNLPPSISSASSFY 241 (433)
T ss_pred hccccccch-h-------------hcccccccchhhHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence 522111110 0 00000000000000112333333333 3455665555 333333333222120111
Q ss_pred HHHhHcC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHh-c---------ccchH
Q 013707 272 FLKAQFH---FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI-S---------WSAWV 338 (438)
Q Consensus 272 ~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~ 338 (438)
+..+..+ +|+...+.+..+..++.+++. .+..+...+..-|+++....++.++..+.-.. . ++.+.
T Consensus 242 ~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~-~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 242 FQTDALGGPHFSPSFYGTLSIVGSIASLLGI-LLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred EEeccccccccCHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 2233345 899888888877777777776 55555555667677777666665544332111 1 12221
Q ss_pred HHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHH
Q 013707 339 PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGL 417 (438)
Q Consensus 339 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 417 (438)
... ..+..+......-+.....++..|+...|+.+++..++.++|..++..++..+.+.++-.+..+.......++..+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 112 4556666677777777889999999999999999999999999999999999998876444444444445555666
Q ss_pred HHHHHHHHHHhhhh
Q 013707 418 ASVRAFTYELLLSF 431 (438)
Q Consensus 418 ~~~~~~~~~~~~~~ 431 (438)
+.++.+.+...+.+
T Consensus 401 ~~ll~l~ll~lLp~ 414 (433)
T PF03092_consen 401 IQLLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 66666666555444
No 121
>PRK10054 putative transporter; Provisional
Probab=99.63 E-value=3.1e-14 Score=133.56 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=131.2
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++.+.+..++...+......++|.|+++++|+|+.+.|+..+...+...+.+ +..|+++||+|+|+.+..+.....
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS-LGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCcchhHHHHHHHHH
Confidence 4557777788888888888899999999998899999999999999999999988 888999999999999999999888
Q ss_pred HHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
++.+.+.+.++.+..+. ..+.+.+.+...+...++..|..|+++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888777665554 3455556666678888999999999999999999999999999999999998875
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.62 E-value=5.2e-13 Score=117.61 Aligned_cols=273 Identities=13% Similarity=0.071 Sum_probs=176.4
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
+....+...+..+..|..-...+ +.+.+..+++.+....+....+.+++.|.++||+|||+.-+.-.+++++
T Consensus 40 l~vY~La~~aDWLQGpY~Y~LY~--------~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLYALYE--------SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHhhcchhHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 33344556677777776544433 4566677889999999999999999999999999999999999999998
Q ss_pred HHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhh-hccC----CccchhHHHHHHH-HHHHhhhhhhHhhhHHh
Q 013707 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV-ADNI----SERQRASAFGILL-GVLSASFVCGTLAARFL 167 (438)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~ 167 (438)
+++ +-..++ ++.++++|++.|+ +.+....+-.++. .|.- |++..+..++... ..+++-.+.+..++..+
T Consensus 112 scl-~k~~~~---~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 112 SCL-TKHSSN---YPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHH-HHhccc---cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 886 445567 8999999999999 8888888877774 4442 2222333333333 22333334444444442
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHh
Q 013707 168 ------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (438)
Q Consensus 168 ------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (438)
|-..||....++..++.+++...-+|+..+..++ .+..+..++..+.
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~---------------------------~~~~~~~~~a~~~ 239 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS---------------------------SSLSGSFREAWRA 239 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc---------------------------cchHHHHHHHHHH
Confidence 3367899888887777666666666654432221 0111245566677
Q ss_pred hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
++++|+++.+.+...++-...+.+.....+-++. +-+..-.|++++......++|+.+....++++......+.....
T Consensus 240 i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~ 317 (354)
T PF05631_consen 240 ILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFA 317 (354)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 7888888777777766666666554444444432 11223459999999999999994443344455444444444444
Q ss_pred HHHHHHH
Q 013707 322 AACINMF 328 (438)
Q Consensus 322 ~~~~~~~ 328 (438)
+.++++.
T Consensus 318 ~aa~~l~ 324 (354)
T PF05631_consen 318 VAAVSLA 324 (354)
T ss_pred HHHHHHH
Confidence 4444443
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=6.7e-15 Score=116.78 Aligned_cols=132 Identities=22% Similarity=0.317 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccC
Q 013707 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (438)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (438)
+.+.++..+++++.|++.||+|||+.+..+.....++.+...+.++ ++.+.+.+++.|+ +.+...+...+++.|..
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGF-GAAFALVAGAALIADIY 80 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHC
Confidence 3456788899999999999999999999999999999888888888 8889999999999 88888899999999999
Q ss_pred CccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhccc
Q 013707 138 SERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 193 (438)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~ 193 (438)
|+++|++.++..+....+|..++|.+++.+ +|++.+++.+...++..+...+..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999888774 78999998888777766666665655
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=4.1e-14 Score=133.55 Aligned_cols=186 Identities=12% Similarity=0.062 Sum_probs=140.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHH
Q 013707 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (438)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (438)
.+.+..++............+.+.++.........+.+....|...++..++..++.++.|+++||+|||+++..+.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~ 291 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAW 291 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34444444444444455566666654310000001234567799999999999999999999999999999999999998
Q ss_pred HHHHHHHHhcc-cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHH-HHHHhhhhhhHhhhHHh--
Q 013707 92 IIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL-- 167 (438)
Q Consensus 92 ~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~-- 167 (438)
.++..+..... +...++.+++.+++.|+ +.+...+....++.|.+|+++|++++|+.+ ...++|..+||.+++.+
T Consensus 292 ~v~~~l~~~~~~~~~~~~~l~l~~~l~g~-~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~ 370 (418)
T TIGR00889 292 ALRFGFFAYGDPEYFGYALLFLSMIVYGC-AFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVE 370 (418)
T ss_pred HHHHHHHHHcCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88877666642 21124667788999999 788888888999999999999999999997 67889999999988763
Q ss_pred --------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013707 168 --------STTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (438)
Q Consensus 168 --------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 198 (438)
||+..|.+.+++.+++.++..+++||+.+..
T Consensus 371 ~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 371 KMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 4899999998888888888888888875443
No 125
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.59 E-value=6.4e-14 Score=134.39 Aligned_cols=367 Identities=16% Similarity=0.169 Sum_probs=256.5
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
.+..+...+..+.+...+..+ ...++++..+.|++.+.+-++..+...+..+..-|..|-|.+-++.++.++
T Consensus 103 ~~~~~~q~l~~~y~~s~Itti--------ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 103 SLAAFAQGLYVGYFNSVITTI--------ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHhhhhhhhhhhhhh--------hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 334444444444444444444 335677777889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc------------------cc-------------------------------hhHHHHHHHHHhhhhcchhh
Q 013707 94 PLAILAYRR------------------SI-------------------------------SFFYAYYALRTLTAMVCEGS 124 (438)
Q Consensus 94 ~~~~~~~~~------------------~~-------------------------------~~~~~l~~~r~l~G~~~~~~ 124 (438)
+.+++++-+ +. ..+..++++.++.|+ |...
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI-G~Tp 253 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI-GATP 253 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc-CCCC
Confidence 988876420 00 023478899999999 8899
Q ss_pred HhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----------------------hHHHHHHHHHHHHH
Q 013707 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----------------------STTSAFQAATIVSM 181 (438)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----------------------~w~~~f~~~~~~~~ 181 (438)
.++...+|+-|...+++-+..+|++.+...+|.++|-++|++. .|..-|++.+.+.+
T Consensus 254 i~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888762 26667778888877
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhH---HHHhhcccchhHHHHHHHHHH
Q 013707 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD---LICLLRSSVTLSQAAVVAFFS 258 (438)
Q Consensus 182 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 258 (438)
+..+.. +++|.+.++..++.+. .+ .+...++....+........+++ ..+.+.+||.+....+...+.
T Consensus 334 ~~a~p~-f~fPk~lp~~~~~~~~---~~-----~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~ 404 (735)
T KOG3626|consen 334 FSAVPL-FFFPKELPKSQKRKRA---RD-----LHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIE 404 (735)
T ss_pred HHHHHH-HhCcccCccccccchh---hh-----hcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 766555 4455554433321000 00 00000000001111111112333 344566799999999999999
Q ss_pred HhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHH---hHhc
Q 013707 259 GLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI---CSIS 333 (438)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~---~~~~ 333 (438)
...+.++.+++|-|+++++|.++..+..+....++..+..+.+++|++.+|+. .|......++...+.++. ..+.
T Consensus 405 ~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~i 484 (735)
T KOG3626|consen 405 SLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFI 484 (735)
T ss_pred HHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEe
Confidence 99999999999999999999999999999988888888777789999999875 355554444444444333 2210
Q ss_pred -----------------------------------------------------------------cc------------c
Q 013707 334 -----------------------------------------------------------------WS------------A 336 (438)
Q Consensus 334 -----------------------------------------------------------------~~------------~ 336 (438)
.+ .
T Consensus 485 gC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~ 564 (735)
T KOG3626|consen 485 GCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVP 564 (735)
T ss_pred cCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccc
Confidence 00 0
Q ss_pred -------------------h---HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhH-hhhhhhhhhHhHH
Q 013707 337 -------------------W---VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI-SSFANIVSPLIFS 392 (438)
Q Consensus 337 -------------------~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~g~~~~g 392 (438)
. .+++ .++..+..+...+..+.++.+.+|+|+|.-++|+..++ +-+|.+-+|.++|
T Consensus 565 ~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG 644 (735)
T KOG3626|consen 565 TNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFG 644 (735)
T ss_pred cccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhh
Confidence 0 0111 12223334444455666678889999999999998755 5778888999999
Q ss_pred HHHHHH
Q 013707 393 PLTALF 398 (438)
Q Consensus 393 ~l~~~~ 398 (438)
+++|..
T Consensus 645 ~~ID~t 650 (735)
T KOG3626|consen 645 AVIDTT 650 (735)
T ss_pred hhHhhH
Confidence 999974
No 126
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.58 E-value=1.7e-11 Score=111.23 Aligned_cols=367 Identities=13% Similarity=0.050 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHH-HHHHHHHHHHHHHHhhhhcccccccCcchH
Q 013707 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLS-GFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 83 (438)
+|++....+++-.|+..+ -=.-|.+.+|..+ + +.+.+..++ .-+.-...-.++...++...+.|..+.|++
T Consensus 2 ~w~~~~~llc~~gf~~~f--rPsEPfl~~yL~~---~---~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv 73 (412)
T PF01770_consen 2 SWKKITLLLCLFGFFKEF--RPSEPFLTPYLTG---P---DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV 73 (412)
T ss_pred CchHHHHHHHHHHHHHhc--CCCCccchHHHcC---C---ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 455555555554444332 2233444444432 1 122222222 223344455667777889999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhh
Q 013707 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (438)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (438)
++++.+...+...+..+.++ ...+-+..+..|+ +.+. ..+.++++-...|+++-.++.+...++..+|..+|..+
T Consensus 74 iil~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~-~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~l 148 (412)
T PF01770_consen 74 IILQALSYIITWLLLLFGTS---VLAMQLMQFFYGL-ATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLL 148 (412)
T ss_pred HHHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHH-HHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999 6444 56889999999999999999999999999999999888
Q ss_pred hHHh------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCC---cccchhccccccCCCCC-----CCCCcccc
Q 013707 164 ARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT---RPIITEETEGVNQNESN-----SPVKIPVC 229 (438)
Q Consensus 164 ~~~~------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~ 229 (438)
|..+ +.+...++......++ ++..+++|..++..--+++. .+..+...+...+..++ ++..+...
T Consensus 149 gQllvs~~~~sy~~L~~isl~~~~~a-~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (412)
T PF01770_consen 149 GQLLVSFGGVSYFQLNYISLASVSLA-LLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESS 227 (412)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccc
Confidence 8764 4455656555443333 44456678765532111111 00000000000000000 00000111
Q ss_pred ccCCchhHHHHh---hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhH--cCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 013707 230 KKIPSIRDLICL---LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMP 304 (438)
Q Consensus 230 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (438)
.....++..++. ..++|.++...+-..+...++..+.++.....++. -+-+....|.+-+...+.+.++. +..|
T Consensus 228 ~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~a-l~~g 306 (412)
T PF01770_consen 228 SRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAA-LLAG 306 (412)
T ss_pred hHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHH-HHHh
Confidence 111122222222 34677777777766666677777777766666554 23344445888888888888887 7778
Q ss_pred HHHHhhchhh--HHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhh
Q 013707 305 LLAPILGEAK--LLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 381 (438)
Q Consensus 305 ~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 381 (438)
.+..++.+.. .+....++.+..++++.+.++.|..+. -+++........+.....+.+...+|.-|-++|+++.+..
T Consensus 307 ~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 307 YVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 8755555533 334445566677777888889998888 4566666777777777778888888888999998887765
Q ss_pred hhhhh
Q 013707 382 FANIV 386 (438)
Q Consensus 382 ~g~~~ 386 (438)
+-+.+
T Consensus 387 ~LQti 391 (412)
T PF01770_consen 387 VLQTI 391 (412)
T ss_pred HHHHh
Confidence 54444
No 127
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.56 E-value=3.5e-13 Score=126.62 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 013707 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (438)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (438)
+..+...++...+......+++.|+++++|+|+.+.|+..+...+...+.+ ++.|+++||+|+|+.+..+..+..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~-~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLG-IFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-hhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 345567777778888889999999988899999999999999999988888 8889999999999999999999999999
Q ss_pred HhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 329 ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 329 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+.+.++.+.++. .++.+++.+...|...+++.+.+|+|+|+++.|+.+....+|..+||.++|.+.+
T Consensus 92 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 92 TMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877766655 5677888888889999999999999999999999999999999999999999984
No 128
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=3e-13 Score=130.64 Aligned_cols=167 Identities=14% Similarity=0.113 Sum_probs=114.8
Q ss_pred HHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHH--
Q 013707 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI-- 97 (438)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~-- 97 (438)
...........+|.+.++ +.+.+....++..+...++..++.+..|+++||+|||+++..+.++..+....
T Consensus 262 ~~~~~~~~~~~~p~~l~~-------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSH-------NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 334444555667777653 22334445567777888999999999999999999999988877654433322
Q ss_pred -HHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----hHHH
Q 013707 98 -LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTS 171 (438)
Q Consensus 98 -~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~ 171 (438)
...+++ ...+++.+++.|+ +.+........++.|.+|++.|+++++.......++..++|.+.+++ +|+.
T Consensus 335 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 335 ILINSNV---IGLIFAGLLMLAV-ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred HHHhCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 222344 6677788998888 66666667788899999999999999975444445556777776653 4677
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013707 172 AFQAATIVSMLAAAYMRVFLKDDVPND 198 (438)
Q Consensus 172 ~f~~~~~~~~i~~~~~~~~~~~~~~~~ 198 (438)
+++...+.+++..+ ..+++||++++.
T Consensus 411 ~~~~~~~~~~i~~~-~~~~~pes~~~~ 436 (490)
T PRK10642 411 PAYYLMVVAVIGLI-TGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHhccccCCC
Confidence 77666665555443 445679988754
No 129
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.55 E-value=2.7e-13 Score=129.79 Aligned_cols=153 Identities=15% Similarity=0.094 Sum_probs=134.3
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGL 320 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 320 (438)
.++.++.+....++..+++++...++|.|+++. +|+++.+.+.+.+.......++. +.+|+++|| +|||+++..+.
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~-~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLT-SVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhcchHHHHHHHH
Confidence 355667777778888899999999999999887 89999999999999999999998 888999999 89999999999
Q ss_pred HHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc---chhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 321 FAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+.+++.+++.+.++.+.... ..+.+++.+...|...+++.+.+|+++ |+++.++.....++|..+||.+.+++.+
T Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 87 IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888776555544 567788888888999999999998764 8889999999999999999999999987
Q ss_pred H
Q 013707 397 L 397 (438)
Q Consensus 397 ~ 397 (438)
+
T Consensus 167 ~ 167 (475)
T TIGR00924 167 N 167 (475)
T ss_pred h
Confidence 6
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=5.1e-13 Score=132.20 Aligned_cols=139 Identities=23% Similarity=0.134 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHh
Q 013707 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (438)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 132 (438)
..+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++ ...+++.+++.|+ ..+...+...++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s---~~~ll~~~~l~g~-~~~~~~~~~~a~ 672 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS---ESAMIALLCLFGG-LSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 345566778999999999999999999999999999999999999999888 6777788888888 667777889999
Q ss_pred hhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh---hHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 013707 133 VADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (438)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 196 (438)
++|++|.++|++++|+.++...+|.++||.+++.+ +...+|++.+++.++..++ ..++||+..
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll-~~~LPET~~ 738 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLL-ALKLPDTRG 738 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhCCCCcc
Confidence 99999999999999999999999999999998764 3456777777766555444 446787653
No 131
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.52 E-value=1.2e-12 Score=123.53 Aligned_cols=153 Identities=12% Similarity=0.156 Sum_probs=126.2
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFA 322 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 322 (438)
+++.++..+...+...+.++++..++|.|+++.+|+++.+.+.+.........++. +.+|+++||+ |||+.+..+.++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHH
Confidence 35667777777788888999999999999999899999999999988888888877 8899999999 999999999999
Q ss_pred HHHHHHHhHhccc-chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCC--cchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 323 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
..++.+++....+ ...... ..+..++.+...+...+++.|.+|++ +|++++++.....++|+.++|.+.+++.+.
T Consensus 86 ~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~ 164 (493)
T PRK15462 86 MAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE 164 (493)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9988877664332 222222 34445666666777888999999876 689999999999999999999999999875
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=5.5e-13 Score=126.14 Aligned_cols=170 Identities=19% Similarity=0.250 Sum_probs=135.0
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHH
Q 013707 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (438)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~ 97 (438)
+......+...+.++.+..+... +.+......|.+.++..++..++.+..|+++||+|||+.+..+.....++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 304 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAG----NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP 304 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 34444555667778888775421 11112234577777888899999999999999999999999998888877777
Q ss_pred HHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHH
Q 013707 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAF 173 (438)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f 173 (438)
..+.++ .+.+++.+++.|+ +.+...|...+++.|..|+++|++.++..+....+|..+||.+++.+ +|+..|
T Consensus 305 ~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f 380 (408)
T PRK09874 305 MSFVQT---PLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVF 380 (408)
T ss_pred HHHhcc---HHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHH
Confidence 777777 7888889999999 88888899999999999999999999999999999999999998874 899999
Q ss_pred HHHHHHHHHHHHHHHHhcccCC
Q 013707 174 QAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 174 ~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
++.+++.++..+...+..++++
T Consensus 381 ~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 381 LVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999888777666655554443
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.50 E-value=1.6e-12 Score=123.76 Aligned_cols=148 Identities=11% Similarity=0.120 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+...++..++..+........+|.+.++ +|+|+.+.+++.+...++..+++ +..|++.||+|+|+.+..+.++.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSK-FVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 3334444555555555667778888776 89999999999999999999998 888999999999999999999999999
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++..+.++.+.... .++.+++.+...+...+++.+.+|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 103 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 103 ILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98888887776655 45667888888888999999999999999999999999999999999999998875
No 134
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.49 E-value=1.3e-12 Score=121.57 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=126.4
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHh
Q 013707 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (438)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (438)
.....++..+........+|.|..+ .+.++.+.+++.+...++..++. +..|+++||+|||+.+..+..+..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLS-PIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHH-HhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 4556667777777788888998887 69999999999999999999998 888999999999999999988887777776
Q ss_pred Hhcc-----cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 331 SISW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 331 ~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.+.. +.+..+. ..+.+++.+...+...+++.|..|+++|+++.|..+....+|..++|.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6655 6565555 577788899999999999999999999999999999999999999999999998863
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.49 E-value=2.4e-13 Score=128.95 Aligned_cols=160 Identities=13% Similarity=0.044 Sum_probs=128.0
Q ss_pred hhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHH
Q 013707 29 PAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFY 108 (438)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~ 108 (438)
...|.+..+.. .+.+.+..+.|++.++..+...++.++.|+++||+|||+.+..+.++.+++..+.+++++ .+
T Consensus 244 ~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~---~~ 316 (420)
T PRK09528 244 QQFPNFFASFF----ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG---PL 316 (420)
T ss_pred HHHHHHHHHHH----hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc---HH
Confidence 34566655432 122344567799999999999999999999999999999999999999988888888888 78
Q ss_pred HHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHH-HHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHH
Q 013707 109 AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLA 183 (438)
Q Consensus 109 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~ 183 (438)
.++..+++.|+ +.+...+....++.|..|++.|+...+. .+....+|.++||.+.+++ ||+..|.+.+++.++.
T Consensus 317 ~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~ 395 (420)
T PRK09528 317 EVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLF 395 (420)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Confidence 88889999998 7777777788999999999998877655 5667788899988888774 8999999988887766
Q ss_pred HHHHHHhcccCCC
Q 013707 184 AAYMRVFLKDDVP 196 (438)
Q Consensus 184 ~~~~~~~~~~~~~ 196 (438)
.++..+.++++++
T Consensus 396 ~~~~~~~~~~~~~ 408 (420)
T PRK09528 396 TLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHhcCCch
Confidence 6666666665544
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=2.4e-12 Score=120.92 Aligned_cols=130 Identities=12% Similarity=0.094 Sum_probs=114.1
Q ss_pred hHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHH
Q 013707 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTA 344 (438)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (438)
...+|.+.+ ++|.|+.+.++..+...++..+++ +..|++.||+|||+.+..+..+..++.+...+.++.+...+ .++
T Consensus 29 ~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 29 VGLLSDIAQ-SFHMQTAQVGLMLTIYAWVVALMS-LPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HcchHHHHh-HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 334566554 589999999999999998988888 66789999999999999999999999999988888877766 467
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.|++.+...+...+++.|..|+|+|+++.|+......+|..++|.+.+.+.++
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~ 159 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY 159 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 78888888889999999999999999999999999999999999999998876
No 137
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.49 E-value=2.1e-12 Score=121.19 Aligned_cols=144 Identities=13% Similarity=0.071 Sum_probs=122.2
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhH
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (438)
.+..+.............|.+.++ +|.++.+.+++.+...++..+++ ++.|++.||+|||+.+..+..+..++.+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 11 GCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQ-LLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 333344444445555566666555 89999999999999999999998 8889999999999999999999999998888
Q ss_pred hcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 332 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 332 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.++.+.... .++.+++.+...+...+++.|.+|+++|+++.|..+....+|..++|.+.+.+.++
T Consensus 89 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 155 (385)
T TIGR00710 89 LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW 155 (385)
T ss_pred HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877776665 57788889999999999999999999999999999999999999999999988876
No 138
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=1.4e-12 Score=120.58 Aligned_cols=145 Identities=19% Similarity=0.313 Sum_probs=122.5
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhH
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (438)
++..++..+........+|.++.+++|.++.+.+++.+...++..+++ +..|+++||+|||+.+..+..+.+++.+...
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFS-PFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHH-HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 345556666666677777867777799999999999999999999998 8889999999999999999999999855555
Q ss_pred hcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 332 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 332 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.++.+.... .++.|++.+...+...+++.|.+|+|+|+++.+..+....+|..++|.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 147 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY 147 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc
Confidence 5566664444 57889999999999999999999999999999999999999999999999998865
No 139
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.47 E-value=1.9e-12 Score=121.35 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=124.9
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++...+..++..+.........+...++ ++.++.+.+++.+...+...+.. ++.|+++||+|||+++..+..+.+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~-~~~G~laDr~grr~vl~~~~~~~~ 79 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLA-PFVGAFADSFPKGRVMFIANGIKL 79 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHH-hhhhHhhhccCCchhhHHHHHHHH
Confidence 3556677777777777666666666666544 78899999999999999999988 888999999999999999999888
Q ss_pred HHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 325 INMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++.+.+.+..+. ...-++.|++.+...|...+++.|.+|+|+|++++|+.+....++..+||.++|.+.+.
T Consensus 80 ~~~~~~~~~~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 80 LGCLLMLFGIHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766555443 23346789999999999999999999999999999999999999999999999999986
No 140
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.47 E-value=6.2e-12 Score=117.99 Aligned_cols=132 Identities=13% Similarity=0.061 Sum_probs=117.5
Q ss_pred hhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-H
Q 013707 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 342 (438)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 342 (438)
.....+|.+.++ +|+++.+.+...+...++..+++ +..+++.||+|||+.+..+.++.+++.+...+.++.+..+. .
T Consensus 38 ~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 38 LPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFAS-LFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 344456776655 89999999999999999999988 78889999999999999999999999888888877777776 5
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+.|++.+...+...+++.|.+|+++|+++.+......++|..++|.+.+.+.+.
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~ 170 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL 170 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7889999999999999999999999999999999999999999999999999876
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=3.7e-12 Score=119.19 Aligned_cols=151 Identities=9% Similarity=0.005 Sum_probs=133.4
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
++.++...+..++...........+|.|.++ +|.|+.+.|++.+...++..+++ +..|+++||+|+|+.+..+..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~-~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGT-LLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457777888888888888899999999987 69999999999999999999998 888999999999999999999999
Q ss_pred HHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++.....+.++.+.+.+ .++.|++.+...|...+...+..++++|+++.|..+....+|..+||.+.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99988888888776666 57778888888888888888888999999999999999999999999999988664
No 142
>PRK10504 putative transporter; Provisional
Probab=99.46 E-value=4.4e-12 Score=122.30 Aligned_cols=150 Identities=13% Similarity=0.041 Sum_probs=130.2
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
+.++...+..++...........+|.+.++ +|.++.+.++..+...++..++. ++.|+++||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVML-PASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 346666777777777777888889999877 89999999999988888888888 8889999999999999998888888
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.+...+.++.+..+. .++.|++.+...|...+.+.|.+|+++|+++.|..+....+|..++|.+.|.+.++
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 8887777777666555 57889999999999999999999999999999999999999999999999999885
No 143
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.46 E-value=4.4e-12 Score=119.56 Aligned_cols=162 Identities=17% Similarity=0.132 Sum_probs=125.0
Q ss_pred HHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHH
Q 013707 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (438)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~ 99 (438)
..++.+...+.+|.+..+. +. ...++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 228 ASIGFGTIATFITLYYAAR--------GW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHHHHHHHHHHHHHc--------cc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666665532 11 1235556777888899999999999999999999998888888888888
Q ss_pred hcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHH
Q 013707 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQA 175 (438)
Q Consensus 100 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~ 175 (438)
+.++ .+.+++.+++.|+ +.+...+.....+.|..|+++|+++.++++....+|..++|.+.+.+ ||+..|++
T Consensus 298 ~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 298 LAPS---PWMALIGAALTGF-GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred Hhcc---HHHHHHHHHHHHH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 8777 7777888999999 77777788888888999999999999999999999988887777664 78999998
Q ss_pred HHHHHHHHHHHHHHhcccCCC
Q 013707 176 ATIVSMLAAAYMRVFLKDDVP 196 (438)
Q Consensus 176 ~~~~~~i~~~~~~~~~~~~~~ 196 (438)
.+.+.++..+... .++++++
T Consensus 374 ~~~~~~~~~~~~~-~~~~~~~ 393 (399)
T PRK05122 374 AALAALLGLALTW-LLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHH-Hhccccc
Confidence 8887766655544 3444433
No 144
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.46 E-value=8.5e-12 Score=120.27 Aligned_cols=155 Identities=14% Similarity=0.070 Sum_probs=125.3
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLF 321 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 321 (438)
++++.++..+...++..+.++....+++.|+++.+|+++.+.+.............. ++.|+++|| +|+|+.+..+..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchHHHHHHHHH
Confidence 345568888888888889999999999999999999999998877776554444444 678999999 599999999999
Q ss_pred HHHHHHHHhHhcccc-hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc--chhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 322 AACINMFICSISWSA-WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+..++..++.+.++. +..++ ..+.+++.+...+...+++.+.+|+++ ++.+.++.+...++|..+||.+.|++.+.
T Consensus 97 ~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~ 176 (500)
T PRK09584 97 VLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK 176 (500)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998888776443 33333 466788888888888899999998654 45688888999999999999999999886
Q ss_pred H
Q 013707 398 F 398 (438)
Q Consensus 398 ~ 398 (438)
.
T Consensus 177 ~ 177 (500)
T PRK09584 177 Y 177 (500)
T ss_pred h
Confidence 3
No 145
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.46 E-value=3.6e-10 Score=104.56 Aligned_cols=368 Identities=13% Similarity=0.079 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|..+.++...+++..+.-+---..|.++.+..+ + .+ ...+...-...+..++.++..|.+.||..|+++...+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p-~--sL----l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFP-G--SL----LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-C--Cc----HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 455668888999999988888888888876421 1 11 1223333344677788999999999999999998877
Q ss_pred HHHHHHHHHHH----H--hcc-c-----chhHHHHHHHHHhhhhcchhhHh-hhhhHhhhccC------CccchhHHHHH
Q 013707 88 LTLSIIPLAIL----A--YRR-S-----ISFFYAYYALRTLTAMVCEGSIN-CLALAYVADNI------SERQRASAFGI 148 (438)
Q Consensus 88 ~~~~~~~~~~~----~--~~~-~-----~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~i~~~~------~~~~r~~~~~~ 148 (438)
.+..-++..+. . +.. + ......+++.-.+.|. -+-... ....+.=.||. +++++.+.++.
T Consensus 75 l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~-i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~ 153 (432)
T PF06963_consen 75 LVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGA-IERLASIANTIAVERDWVVVIAGGDPGALARMNAT 153 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHH-HHHHHHhhhhheeccchhhhhcCCChhhHHHHHHH
Confidence 66443332222 1 111 1 1112222333233332 111111 11222224453 34456667777
Q ss_pred HHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCCCCCCCCcccchhccccccCCCC
Q 013707 149 LLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK----DDVPNDDDDDLTRPIITEETEGVNQNES 220 (438)
Q Consensus 149 ~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (438)
+.-.-.+..+++|++.+.+ +.+....+.+...++....=++++. ..|+-+.++++ ++......++ +..+
T Consensus 154 mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~-~~~~~~~~~~--~~~~ 230 (432)
T PF06963_consen 154 MRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRS-SESESSSDEE--SSSE 230 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCC-cccccccccc--cccc
Confidence 7777778888999888774 4555555555555554433222221 12211111100 0000000000 0000
Q ss_pred CCCCCccccccC---CchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHH
Q 013707 221 NSPVKIPVCKKI---PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 297 (438)
Q Consensus 221 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 297 (438)
+........+.. ...++.++...+.+.+...+...+++ +..-++......|+..+ |+++..+|..-+...+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY-~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~ 308 (432)
T PF06963_consen 231 SSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLY-FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLL 308 (432)
T ss_pred ccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHH
Confidence 000000000000 11122234455566555444444444 44555677888899886 99999999999999999999
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH----hHhcccc--hHHHHH-----HHHHhhhhhhHHHHHHHHhhcCCC
Q 013707 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFI----CSISWSA--WVPYAT-----TAFSVLVVFATPSFRSIVSKQVGP 366 (438)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 366 (438)
+. +..+++.+|+|..+.-.++......++.+ +....+. ..-... ++-=+|.=..-....-+++|.+|+
T Consensus 309 gT-~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~ 387 (432)
T PF06963_consen 309 GT-WVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE 387 (432)
T ss_pred HH-HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH
Confidence 98 88899999999888766666544433322 2222222 111111 222244444556777888999999
Q ss_pred CcchhHHHHHhhHhhhhhhhhhH
Q 013707 367 NEQGKAQGCISGISSFANIVSPL 389 (438)
Q Consensus 367 ~~~g~~~g~~~~~~~~g~~~g~~ 389 (438)
++||+..|.-+..+++...+.-.
T Consensus 388 ~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 388 SERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877766543
No 146
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.46 E-value=6.9e-12 Score=118.38 Aligned_cols=141 Identities=10% Similarity=-0.013 Sum_probs=120.1
Q ss_pred HHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc
Q 013707 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (438)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (438)
..++............| .+++++|+++.+.++..+...++..+++ +..|++.||+|||+.+..+.++..++.+...+.
T Consensus 16 ~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 93 (412)
T TIGR02332 16 LFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICG-IPSNIMLAIIGARRWIAGIMVLWGIASTATMFA 93 (412)
T ss_pred HHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333444444444 6667799999999999999999999999 777899999999999999999999999999888
Q ss_pred ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 334 WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 334 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
++.+.++. -++.|++.+...|....++.|.+|+++|+++.|+.+....+|..+++.+.+++.+
T Consensus 94 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 94 TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88776666 5788999999899999999999999999999999999999999999999998875
No 147
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.46 E-value=5.1e-12 Score=118.25 Aligned_cols=150 Identities=12% Similarity=0.029 Sum_probs=130.6
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
+.++......+............+|.+.++ +|.+..+.++..+...++..+++ +..|++.||+|||+.+..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGA-PIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHH-HHHHHHHccCccHHHHHHHHHHHHH
Confidence 445666677777777777777888877665 89999999999999999999998 8889999999999999999999999
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.++..+.++.+.+++ .++.|++.+...+.....+.+..|+++|+++.+.......++..++|.+.+.+.+.
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 153 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE 153 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh
Confidence 9999999888887776 57788888888888888899999999999999999999999999999999988775
No 148
>PRK12382 putative transporter; Provisional
Probab=99.45 E-value=5.5e-12 Score=118.59 Aligned_cols=152 Identities=14% Similarity=0.060 Sum_probs=122.7
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
++.++...+..++...........+|.|+++++|.|+.+.|.+.+...+...+.+ +..|+++||+|||+.+..+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTR-GYAGRLADQYGAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHh-hhhhHHHHhhcchHHHHHHHHHHH
Confidence 3445666666667767777778888989888899999999999999999999999 888999999999999998887766
Q ss_pred HHHHHh---Hhc-----ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 325 INMFIC---SIS-----WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 325 ~~~~~~---~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
++.+.. ... .+.+.+++ -.+.|++.+...+...+++.+..|+|+|+++.|..+.....+..++|.+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 93 LAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 554322 221 12333333 467788888888888889999999999999999999999999999999999887
Q ss_pred HH
Q 013707 396 AL 397 (438)
Q Consensus 396 ~~ 397 (438)
+.
T Consensus 173 ~~ 174 (392)
T PRK12382 173 SH 174 (392)
T ss_pred hc
Confidence 75
No 149
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.45 E-value=5.1e-12 Score=121.16 Aligned_cols=154 Identities=14% Similarity=0.063 Sum_probs=131.8
Q ss_pred ccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHH
Q 013707 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 322 (438)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 322 (438)
++|.++..+...+...+++++...+++.|+++.+|++..+.+++.........+.. +++|+++|| +|||+++..+.++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHHHHH
Confidence 35667777778888889999999999999999999999999888888777777766 788999999 9999999999999
Q ss_pred HHHHHHHhHhcccchHHH-H-HHHHHhhhhhhHHHHHHHHhhcCCCCc--chhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 323 ACINMFICSISWSAWVPY-A-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
..++.+.+.+..+....+ . ..+.+++.+...|...+++.|.+|+++ |++++++.....++|..+||.+.|++.++.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999998888876544322 3 566788889899999999999998874 578999999999999999999999998864
No 150
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.3e-11 Score=111.56 Aligned_cols=176 Identities=15% Similarity=0.091 Sum_probs=154.1
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
..++.+.+..|.....++.....+|...+| +|.|..+.|...+.++.+..++. +....+.||+.||+++...+.+..+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~a-p~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGA-PLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcccchHHHHHHHHHHHHH
Confidence 346667788888888888899999999988 89999999999999999999999 6667999999999999999999999
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCC
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 404 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 404 (438)
+.++..++++.+.+.+ -++.++..+..++...+...+.+|+++|+++.++..+...++..+|.+++.++-|.++
T Consensus 91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G----- 165 (394)
T COG2814 91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG----- 165 (394)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-----
Confidence 9999999999998887 5889999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 405 FNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
| ...|.+.+.+.++.....+...|
T Consensus 166 --W-R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 --W-RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred --H-HHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 34556666666666666555544
No 151
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.43 E-value=5.4e-12 Score=119.24 Aligned_cols=155 Identities=19% Similarity=0.147 Sum_probs=119.6
Q ss_pred hhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcc
Q 013707 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (438)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~ 102 (438)
.........|.+.++ .+.+..+.+...+...++..++.++.|+++||+|||+.+..+.+...++.....+.+
T Consensus 235 ~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (406)
T PRK11551 235 VLYFLLNWLPSLLVG--------QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP 306 (406)
T ss_pred HHHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 333334445666553 355556778899999999999999999999999999999887777777766666777
Q ss_pred cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-----hHHHHHHHHH
Q 013707 103 SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAAT 177 (438)
Q Consensus 103 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~~ 177 (438)
+ .+.+.+..++.|+ +.+...+...+++.|.+|+++|++..|+.+....+|..+||.+++.+ +|...++...
T Consensus 307 ~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~ 382 (406)
T PRK11551 307 S---FAGMLLAGFAAGL-FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASI 382 (406)
T ss_pred c---HHHHHHHHHHHHH-HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHH
Confidence 7 6667777788888 66667788899999999999999999999999999999999999875 4556666665
Q ss_pred HHHHHHHHHHHH
Q 013707 178 IVSMLAAAYMRV 189 (438)
Q Consensus 178 ~~~~i~~~~~~~ 189 (438)
...++..+..+.
T Consensus 383 ~~~~~~~~~~~~ 394 (406)
T PRK11551 383 PVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHHH
Confidence 555444444333
No 152
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=7.2e-12 Score=117.71 Aligned_cols=159 Identities=14% Similarity=0.151 Sum_probs=118.9
Q ss_pred hhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc
Q 013707 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (438)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~ 101 (438)
..........|.+.++ +.+.+..+.|++.+...+...++.++.|+++||+|||+.+..+.....+........
T Consensus 230 ~~~~~~~~~~p~~l~~-------~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK15011 230 GTNSLYIINMPLFIIN-------ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA 302 (393)
T ss_pred HHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445567777654 345556677888777778888899999999999999998887776665555555556
Q ss_pred ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHH
Q 013707 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAAT 177 (438)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~ 177 (438)
++ .+.+++.+++.++ +.+...+....+..|..|+ +|+++.+..+...++|..+||.+++. ++|+..|++.+
T Consensus 303 ~~---~~~~l~~~~l~~~-~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~ 377 (393)
T PRK15011 303 HS---PAILLGLQLLNAI-YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFAL 377 (393)
T ss_pred hh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 66 6777788888887 6676666777888998884 68999999988889999999988877 48999999887
Q ss_pred HHHHHHHHHHHHhccc
Q 013707 178 IVSMLAAAYMRVFLKD 193 (438)
Q Consensus 178 ~~~~i~~~~~~~~~~~ 193 (438)
++.++..+ ..++.||
T Consensus 378 ~~~~~~~~-~~~~~~~ 392 (393)
T PRK15011 378 VMIIATLF-CLLRIKD 392 (393)
T ss_pred HHHHHHHH-HHHhhcC
Confidence 77665543 4445554
No 153
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.42 E-value=1.3e-11 Score=119.32 Aligned_cols=149 Identities=16% Similarity=0.079 Sum_probs=127.6
Q ss_pred hhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013707 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (438)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (438)
.+....+..++...-.......+|.+.++ +|.++.+.++..+.+.++..... +..|+++||+|||+.+..+..+..++
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~-~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMV-LPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34455566666666666777788888766 79999999999999999988888 78899999999999999999999999
Q ss_pred HHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcC-CCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 327 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+..++.++.+.+++ -.+.|++.+...|.....+.+.+ |+++|+++.|+......+|..+||.++|.+.++
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999988887776 47889988888888877776655 678999999999999999999999999999886
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.42 E-value=1.3e-12 Score=124.87 Aligned_cols=164 Identities=14% Similarity=0.138 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc--CcchHhHH-
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLTL- 86 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grk~~l~~- 86 (438)
++......++..++.......+|.|.++ .+.+..+.|++.++..++..+++++.|+++||. ++|+...+
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKD--------KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 4444455555555555555667777653 355667789999999999999999999999984 34443333
Q ss_pred -HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 87 -PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
+....+++.++....++ ++.+++.+++.|+ +.+...+...+++.|.+|++++++.+++++...++|..+||.+++
T Consensus 315 ~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~-~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 315 FALLFNGLTHLLCALAGD---YTGLVIYCIFFGL-SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHHHHHHHhch---HHHHHHHHHHHHH-HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 33444455555666777 7888889999999 888888889999999999999999999999999999999999988
Q ss_pred Hh-----hHHHHHHHHHHHHHHHHH
Q 013707 166 FL-----STTSAFQAATIVSMLAAA 185 (438)
Q Consensus 166 ~~-----~w~~~f~~~~~~~~i~~~ 185 (438)
.+ +|+..|++.+++.++..+
T Consensus 391 ~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 391 RLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeehhcCCcchHHHHhhHHHHHHHH
Confidence 63 588999988877655543
No 155
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.42 E-value=1e-11 Score=117.74 Aligned_cols=160 Identities=10% Similarity=0.026 Sum_probs=128.5
Q ss_pred hhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchh
Q 013707 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (438)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (438)
....+|.+.++ ..+.+....|++.+...++..++.++.|++.||.++++.+..+.++.+++.++..+.++
T Consensus 242 ~~~~~p~~~~~-------~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--- 311 (417)
T PRK10489 242 VRVLYPALADE-------VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM--- 311 (417)
T ss_pred HHHhhHHHHHh-------ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch---
Confidence 34456777653 24555677899999999999999999999999988888888888888888877777777
Q ss_pred HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHH
Q 013707 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSML 182 (438)
Q Consensus 107 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i 182 (438)
.+...+..++.|+ +.+...+...+++.|..|+++|++++|+......+|..+||.+.+.+ |.+..++..+...++
T Consensus 312 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 312 WILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 7777788888898 77777777889999999999999999999999999999999888774 667778777776666
Q ss_pred HHHHHHHhcccCCCC
Q 013707 183 AAAYMRVFLKDDVPN 197 (438)
Q Consensus 183 ~~~~~~~~~~~~~~~ 197 (438)
..++....+||.++.
T Consensus 391 ~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 391 IGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHhccccccc
Confidence 666666667776543
No 156
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.42 E-value=4.7e-12 Score=117.02 Aligned_cols=167 Identities=23% Similarity=0.236 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcch-HhHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-MLTLP 87 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~-~l~~~ 87 (438)
.++...+..+.............|.+.++. .+.+..+.++..+...++..++.++.|++.||+|||+ .+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEV-------LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344445555566666677777778777642 2455677899999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
..+..++.+.....++ .+...+..++.|+ +.+...+...+++.|..|+++|++.++..+...++|..++|.+.+.+
T Consensus 249 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 249 LLLAALGLLLLALAPS---LALLLVALLLLGF-GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888 8888999999999 88888999999999999999999999999999999999999998874
Q ss_pred ----hHHHHHHHHHHHHHHHHHH
Q 013707 168 ----STTSAFQAATIVSMLAAAY 186 (438)
Q Consensus 168 ----~w~~~f~~~~~~~~i~~~~ 186 (438)
+|+..+++.+++.++..+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHH
Confidence 7899999998887666544
No 157
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.42 E-value=8.8e-12 Score=120.76 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 013707 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (438)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (438)
.+.+..++............|.+.++ +|.++.+.+++.+...++..++. +..|+++||+|||+.+..+..+..++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISI-PLTGWLAKRFGTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHH-HhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 34455555555556666777777766 89999999999999999999988 88899999999999999999999999999
Q ss_pred hHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 330 CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 330 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
....++.+..+. .++.|++.+...+...+++.|.+|+++|+++.++......+|..++|.+.+.+.++
T Consensus 84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 84 CGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 988888776666 57788999999999999999999999999999999999999999999999998775
No 158
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.41 E-value=2.5e-11 Score=112.98 Aligned_cols=149 Identities=17% Similarity=0.153 Sum_probs=123.7
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
++......+...........+.|.++++++|+|+.+.+++.+...++..++. +..|+++||+|+|+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4445555666666667778888877878899999999999999999999998 888999999999999999999999999
Q ss_pred HHhHhcc-cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 328 FICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 328 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
+...+.+ +.+..+. .++.|++.+. .+....++.+.+|+++|+++.++.....++|..+++.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9888887 7666655 4666776543 4556788999999999999999999899999999998888877653
No 159
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=1.8e-11 Score=115.01 Aligned_cols=148 Identities=12% Similarity=0.024 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
.+...+..++...........+|.+.++ +|+|+.+.+...+...++..+++ +..|++.||+|+|+.+..+..+..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISI-FLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4444455555555555566667776654 89999999999999999999988 888999999999999999999999988
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++..+.++.+.... ..+.+++.+...+...+.+.|..|+++|++..+..+....++..++|.+.+.+.+.
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888877766555 56778888888888888999999999999999998888899999999998887654
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.40 E-value=1.8e-11 Score=115.69 Aligned_cols=148 Identities=11% Similarity=0.064 Sum_probs=125.5
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+....+..+...+.........|.+. +++|.++.+.+++.+...++..+++ +..|+++||+|||+.+..+.++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGA-LMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 44445555555555555566666554 5589999999999999999999998 888999999999999999999999998
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+...+.++.+..+. .++.|++.+...+...+++.|..|+++|+++.++.+....+|..+++.+.+.+.+.
T Consensus 92 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 92 LACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888887776665 57788898999999999999999999999999999999999999999999988775
No 161
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=8.9e-12 Score=121.05 Aligned_cols=144 Identities=14% Similarity=0.106 Sum_probs=106.4
Q ss_pred hhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchh
Q 013707 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (438)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (438)
....+|.+.++ +.+.+..+.|++.+...++..++.++.|+++||+|||+++..+..+..+..+......+..
T Consensus 294 ~~~~lp~~l~~-------~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 365 (496)
T PRK03893 294 IQALLPTYLKT-------DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGAN- 365 (496)
T ss_pred HHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccH-
Confidence 34567777643 4466677889999999999999999999999999999999888776666655444333211
Q ss_pred HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHH
Q 013707 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIV 179 (438)
Q Consensus 107 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~ 179 (438)
.+......++.+. ......+...+++.|.+|+++|++.+++......+|..+||.+++.+ ||+..+...+..
T Consensus 366 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 366 VWVLGLLLFFQQM-LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHHHH-HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 3444445555444 22233456778899999999999999999999999999999988874 677777655443
No 162
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.40 E-value=2.4e-11 Score=114.29 Aligned_cols=150 Identities=11% Similarity=0.051 Sum_probs=124.6
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
|.+.......+....+.......+|.+.++ +|.++.+.++..+...++..++. +..|+++||+|||+.+..+.....+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAM-LFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHhHHHHHhCChHHHHHHHHHHHH
Confidence 444555555555556666666677777766 79999999999999999988988 8889999999999999999999999
Q ss_pred HHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 326 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+.......++.+.... ..+.+++.+...+...+++.|.+|+++|+++.+..+....++..++|.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9888888777665555 56778888888888999999999999999999999999999999999998877654
No 163
>PRK11043 putative transporter; Provisional
Probab=99.39 E-value=3e-11 Score=113.92 Aligned_cols=144 Identities=15% Similarity=0.067 Sum_probs=117.0
Q ss_pred HHHHHHHhhhchhhHHHHHH--HHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHh
Q 013707 253 VVAFFSGLSEGGMQASFLYF--LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (438)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (438)
...++....+.....+.|.+ .++++|.++.+.++..+...++..++. +..|+++||+|||+.+..+..+..++.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQ-LLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 33333334444445555544 455689999999999999999999998 888999999999999999998888888888
Q ss_pred HhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 331 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+.++.+...+ ..+.|++.+...+...+.+.|.+|++++++..+..+....++..++|.+.+.+.+.
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 156 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH 156 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88877766655 46667777777777888899999999999999999989999999999999998875
No 164
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=4.1e-12 Score=118.68 Aligned_cols=164 Identities=16% Similarity=0.219 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
.+.+....+...+.........+.+.+ +.+.+..+.+.+.+...++..+++++.|+++||+|||+.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 278 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQ--------SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFG 278 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 333333344444444444444555544 234455677888999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (438)
+.+++.+...+.++.. ...++...++.|+ +.+...+...+++.|.+|+++|++..|+.+....+|..++|.+.+.
T Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 279 ISAVGMAAMLFIPMLN-DVLFLATVALVFF-TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHHHHHcccch-hHHHHHHHHHHHH-HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888777776521 2334456677787 6666667778899999999999999999999999999999988876
Q ss_pred -hhHHHHHHHHHHHHHHH
Q 013707 167 -LSTTSAFQAATIVSMLA 183 (438)
Q Consensus 167 -~~w~~~f~~~~~~~~i~ 183 (438)
.||+..|.+.+++.+++
T Consensus 357 ~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhchhhHHHHHHHHHHHh
Confidence 38999998887765543
No 165
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.39 E-value=5.3e-11 Score=111.34 Aligned_cols=148 Identities=15% Similarity=0.091 Sum_probs=115.0
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
|+++...+..+.............+.+-++.+|+|+.+.+++.+...+...+.+ +..|++.||+|.|+++..+.++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~r-ip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLR-VPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455555555555555555555555555554699999999999999999999998 5668999999999999999999988
Q ss_pred HHHHhHhc-----ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 326 NMFICSIS-----WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 326 ~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
..+...+. ++.+.+++ .++.|++ +..++.....+++.+|+++||++.|+.....++|..+++.+...+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88888875 55555555 5677776 6678888899999999999999999997777777776666665544
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.39 E-value=8.2e-11 Score=113.13 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=104.3
Q ss_pred hhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-H
Q 013707 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 342 (438)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 342 (438)
......|.+ .+.+|++..+.+.+.+...++..++. ++.|+++||+|+|+.+..+.+..+++.++..+.++.+.+++ .
T Consensus 54 ~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r 131 (476)
T PLN00028 54 AAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSR-LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVR 131 (476)
T ss_pred HHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 333444444 55589999999998888888888888 88899999999999999999888888888888877766655 4
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++.|++.+... ....++.+.+|+++||++.|+.+...++|..+++.+.+.+.+.
T Consensus 132 ~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 132 FFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56676666543 3456788999999999999999998889999988888766554
No 167
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.38 E-value=1.9e-11 Score=114.43 Aligned_cols=163 Identities=14% Similarity=0.097 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|.++...+..++...+........|.+.+| .+.+..+.|++.+...++..+..++.|++.||+|+|+.+.++
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--------~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~ 276 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--------AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLIS 276 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHH
Confidence 445555666666677777777788888763 466667889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHH-HHHHhhhhhhHhhhHH
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARF 166 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~ 166 (438)
.+...+.....+++++ .+.++..+++.|+ +.+...+....++.+. |+++|++..+.++ ...++|..+||.++|+
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~-~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 277 AIACVGRWAIIGAIEA---FPLIFLLQILHCG-TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHHhHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8999999999999 8899999999999998 9999999999986 4678899999998887
Q ss_pred h----hHHHHHHHHHHHHHHHH
Q 013707 167 L----STTSAFQAATIVSMLAA 184 (438)
Q Consensus 167 ~----~w~~~f~~~~~~~~i~~ 184 (438)
+ ++ ..|+..+.++++..
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 352 IYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHHH
Confidence 5 43 55777776665543
No 168
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=1.2e-11 Score=116.38 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=116.3
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHH
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 339 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
..........|.+.++ +|.++.+.+++.+...++..++. ++.++++||+|||+.+..+..+..++.++..+.++.+..
T Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (398)
T TIGR00895 31 YDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGA-LFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQL 108 (398)
T ss_pred HHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH-HHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3334444455555544 89999999999999999999988 888999999999999999999998888888888777665
Q ss_pred HH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 340 YA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 340 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+ ..+.+++.+...+...+++.|..|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 55 57788888889999999999999999999999999999999999999999998875
No 169
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.37 E-value=4.1e-11 Score=112.93 Aligned_cols=151 Identities=18% Similarity=0.127 Sum_probs=122.2
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.+....+..++..........+++.+.++ +|.++.+.+...+...++..+++ ++.|++.||+|||+.+..+..+.+
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISA-WISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4556677777777777777778888999866 79999999999999999999998 888999999999999999988888
Q ss_pred HHHHHhH---hc-ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhh-hhhhHhHHHHHHH
Q 013707 325 INMFICS---IS-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTAL 397 (438)
Q Consensus 325 ~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~g~~~~g~l~~~ 397 (438)
++.+... .. .+.+..+. ..+.|++.+...+...+.+.+..|+++|+++.|+.+....+|. .++|.+.+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7765442 22 23444443 4566777777777777888889999999999999999999996 5789888888765
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.37 E-value=5.3e-11 Score=112.45 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=113.3
Q ss_pred hhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHH
Q 013707 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (438)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
........+|.+.+ ++|.++.+.+...+...++..++. +..|+++||+|||+.+..+.....++.+.....++.+.++
T Consensus 28 ~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~ 105 (406)
T PRK15402 28 ANDMIQPGMLAVVE-DFNAGAEWVPTSMTAYLAGGMFLQ-WLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFT 105 (406)
T ss_pred hhhhHhcchHHHHH-HhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 34444555666554 489999999999999999999988 8889999999999999999988888888888877776665
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
. ..+.|++.+...+...+.+.|.+|+++|++..++......++..++|.+.+.+.++
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 163 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV 163 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 46678888777888889999999999999999999888889999999999988775
No 171
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.36 E-value=4.7e-11 Score=111.55 Aligned_cols=168 Identities=14% Similarity=0.141 Sum_probs=124.7
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH-HHHHHHHHHHHHh
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS-LGLFAACINMFIC 330 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 330 (438)
.+..++..+........+|.|+++++|.|+.+.|++.+...+...+.+ +..|+++||+|||+.+. .+.....++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVS-QLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 345677777888889999999988899999999999999999999988 77899999999887655 4555556666677
Q ss_pred HhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhH--HHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCC
Q 013707 331 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKA--QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNF 407 (438)
Q Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 407 (438)
.+.++.+.++. ..+.+.+.+...|...++..|..|++.|++. .+.......+|..++|.+.+.+.+.. .
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~--------~ 153 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF--------G 153 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc--------c
Confidence 77777665554 3555666666778888888888887777654 57777888999999999999988752 2
Q ss_pred CchHHHHHHHHHHHHHHHHHh
Q 013707 408 PGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~ 428 (438)
....+.+.+++.++..+..++
T Consensus 154 ~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 154 FTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 223444455544444444333
No 172
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=1.9e-11 Score=114.91 Aligned_cols=130 Identities=11% Similarity=0.041 Sum_probs=115.6
Q ss_pred hHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHH
Q 013707 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTA 344 (438)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (438)
....|. +++++|.++.+.+++.+...++..++. +..|++.||+|||+.+..+..+..++.....+.++.+.... ..+
T Consensus 14 ~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (399)
T TIGR00893 14 SFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQ-FPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVL 91 (399)
T ss_pred hHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHH-HhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 333444 556689999999999999999999998 88899999999999999999999998888888887777666 578
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999988775
No 173
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.36 E-value=3.3e-11 Score=110.43 Aligned_cols=176 Identities=16% Similarity=0.173 Sum_probs=136.8
Q ss_pred hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
+..++....++...++.++......+++--++++ ++-.+.-.|......-.+-++ .+++.+++.+|+|+.+++..++.
T Consensus 367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~-~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEIL-FYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHH-HHHHHHHHHHHhcccceeeehhh
Confidence 3345666667778888888888888998888888 465555556444444444444 45888999999999999999999
Q ss_pred HHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHh-hhhhhhhhHhHHHHHHHHh
Q 013707 322 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~g~l~~~~~ 399 (438)
+..+-++.+....|.|.... -++-++..+..+.+.-++++...||+.+.++.++..... .+|-.+|.+++|.+.+.++
T Consensus 445 ~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg 524 (618)
T KOG3762|consen 445 CNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG 524 (618)
T ss_pred HHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh
Confidence 99999999999999998776 588899999999999999999999999999999987654 8999999999999988743
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013707 400 SKGAPFNFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
....|-..++.+++.+++..
T Consensus 525 --------~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 525 --------ARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred --------hHHHHHHHHHHHHHHHHHHH
Confidence 23334444444444444443
No 174
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1e-11 Score=111.57 Aligned_cols=379 Identities=14% Similarity=0.126 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----cCcchH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM 83 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~ 83 (438)
+.+..+....+-..+++..-....|+|.++. +++..+.+.+--+..+...+.+|+.|..+|| |||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l--------Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL--------GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc--------CCCcccccccccccccccceecccccccccccccccccccc
Confidence 4444455555556677777777788887743 4444555666666678888999999999995 799888
Q ss_pred hHH-HHHHHHHHHHHHHhcccch--------------hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhH-HHH
Q 013707 84 LTL-PLTLSIIPLAILAYRRSIS--------------FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS-AFG 147 (438)
Q Consensus 84 l~~-~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~-~~~ 147 (438)
++. +....+++.++..++.+.. .....++.--+.-+ +.........+++.|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~-A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDV-ANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHh-hhhhhhhhHHHHHHHhccChhhhhccch
Confidence 775 4456677777777765421 12233344444444 555677788999999998776666 999
Q ss_pred HHHHHHHhhhhhhHhhhHHhhHH--HHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-CCCcccchhccccccCCCCCCCC
Q 013707 148 ILLGVLSASFVCGTLAARFLSTT--SAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRPIITEETEGVNQNESNSPV 224 (438)
Q Consensus 148 ~~~~~~~~g~~~g~~l~~~~~w~--~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (438)
.......+|..+|..++++.+|+ .+|......-+.+..+-..+..|-+-....+ +......++.. ..+..+.+.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~---s~~~~~~~~ 259 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPL---SPKGTTARS 259 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCC---CCCcccccc
Confidence 99999999999999999887774 2333332222222222211111111000000 00000000000 000000000
Q ss_pred CccccccCCchhHHHHh-hcccchhHHHHHHHHHHHhhhchhhHHHHHHH-HhHcCCChhHH----------------HH
Q 013707 225 KIPVCKKIPSIRDLICL-LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQF----------------AD 286 (438)
Q Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~----------------~~ 286 (438)
+. .......+.+.. ...+|.++.+++...+.+++...+.-+...++ ++.|+-|+... .+
T Consensus 260 ~~---~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~ 336 (498)
T KOG0637|consen 260 KS---SKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCL 336 (498)
T ss_pred cc---cCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchH
Confidence 00 000011121212 23466788888888888888777766666655 33444332211 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhh---------------
Q 013707 287 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVV--------------- 350 (438)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------------- 350 (438)
=+..+.+...+.+ ....++.||+|.|+....+.....++..+.....+.+.... ....|...+
T Consensus 337 GL~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 337 GLMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 2345556666666 66779999999655444444333333333333322222111 111121111
Q ss_pred ------hhHHHHHHHHhhcCCC--CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCC
Q 013707 351 ------FATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 402 (438)
Q Consensus 351 ------~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~ 402 (438)
..+...++..+....+ ..+|...|+.+..-.+.+.+.....|.+.+..++.+
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~ 475 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN 475 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence 1111112222111111 234667777888888888888888899988876543
No 175
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=2.2e-11 Score=108.76 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=122.3
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhH
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (438)
++....+.+.--.++.-.|. +.++.++|.+|.|.+.+...+...++. .+.|.++||.+.|..+..++++.++..++++
T Consensus 35 fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i~YG~sK-f~~G~~sDr~npr~fm~~gLilsai~nil~G 112 (448)
T COG2271 35 FIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSITYGVSK-FVMGVLSDRSNPRYFMAFGLILSAIVNILFG 112 (448)
T ss_pred HHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHHHHHHHH-HHhhhhcccCCCceeehHHHHHHHHHHHHHh
Confidence 33333333443344444444 445578999999999999999999999 8899999999999999999999999999999
Q ss_pred hcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhH--HHHHHH
Q 013707 332 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF--SPLTAL 397 (438)
Q Consensus 332 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~--g~l~~~ 397 (438)
+.++.+.+.+ ..+-|.+.+...|+....+..-+|+++||+..++-|+..++|+.+.|.+. +.+.++
T Consensus 113 fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 113 FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 9998777666 57889999999999999999999999999999999999999999999999 777665
No 176
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.35 E-value=3.6e-11 Score=112.48 Aligned_cols=133 Identities=12% Similarity=0.110 Sum_probs=117.5
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA- 341 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 341 (438)
......+|.+.++ +|.|+.+.+...+...++..++. +..|++.||+|||+.+..+..+..++.....+.++.+....
T Consensus 8 ~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 8 DMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQ-LFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3445667777776 79999999999999999999998 88899999999999999999999999988888877766655
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 342 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
..+.+++.+...+...+++.|..|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 141 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW 141 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57778888888899999999999999999999999999999999999999998875
No 177
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=1.1e-10 Score=112.00 Aligned_cols=166 Identities=18% Similarity=0.180 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+..+....++..+..+.+...+|.+.++ +++.++...|++.+++.+|.+++++..+++.+|+++++.+..+.+
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~-------~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~ 292 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARD-------VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASL 292 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHH-------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHH
Confidence 3333443444444445555678888765 345556778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (438)
+.+++.+..+++++ .+..++.-++.|+ +.....+..++.+.+..|++.|||.+++++.....+..+|..+.|.
T Consensus 293 ~~a~~~~~lal~~~---~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 293 LFALALLLLALSPS---FWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHhcchH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8888889999999 7888888889999999999999999999998888777777777666
Q ss_pred -hhHHHHHHHHHHHHHHHHHH
Q 013707 167 -LSTTSAFQAATIVSMLAAAY 186 (438)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~ 186 (438)
+|-+..+.+.++..++..++
T Consensus 369 ~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 369 HFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HhCHHHHHHHHHHHHHHHHHH
Confidence 46677777776654444333
No 178
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.33 E-value=9e-11 Score=110.45 Aligned_cols=143 Identities=14% Similarity=0.118 Sum_probs=116.3
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHh
Q 013707 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (438)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (438)
....+..+........+|.+.++ +|.|+.+.+...+...++..++. +..|+++||+|||+.+..+.....++.+....
T Consensus 15 ~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 92 (394)
T PRK11652 15 LLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQ-LFYGPLSDRVGRRPVILVGMSIFILGTLVALF 92 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444556666655 79999999999999999999998 88899999999999999999988888888877
Q ss_pred cccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 333 SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 333 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.++.+.+.. ..+.|++.+...+.......|..++++++++.+..+....++..++|.+.+.+.+.
T Consensus 93 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 158 (394)
T PRK11652 93 AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL 158 (394)
T ss_pred HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777766655 56677777777788888888989999999999999999999999999999988764
No 179
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=5.8e-11 Score=114.16 Aligned_cols=133 Identities=11% Similarity=0.017 Sum_probs=109.6
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHh-----cccch
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI-----SWSAW 337 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 337 (438)
.......|.+.+ ++|.+..+.|++.+...++..+++ +..|+++||+|+|+++..+.+..++..+.++. .++.+
T Consensus 46 ~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (467)
T PRK09556 46 KNFKAAQNDMIS-TYGLSTTELGMIGLGFSITYGVGK-TLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLG 123 (467)
T ss_pred cChhhhhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHH-hhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 344455666554 589999999999999999999998 88899999999999998888777766665554 34555
Q ss_pred HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 338 VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 338 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+.+ -.+.|++.+...|....++.+.+|+++||++.|+.+....+|.++++.+..++.+.
T Consensus 124 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 124 LMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 5554 46778888888899999999999999999999999999999999999888777665
No 180
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=1.8e-10 Score=108.19 Aligned_cols=132 Identities=10% Similarity=-0.018 Sum_probs=116.6
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA- 341 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 341 (438)
......+|...+| +|+|..+.++..+...++..+++ +..|++.||+|||+++..+..+.+++.+..++.++.+..+.
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~-~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLA-LAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 4455666666654 89999999999999999999988 88899999999999999999999999999999998887666
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 342 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.++.|++.+...+.....+.+.+| ++|++++|........|..+++.+.+.+.++
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578899999888888889898887 8899999999999999999999999988775
No 181
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=9.7e-11 Score=111.47 Aligned_cols=148 Identities=13% Similarity=0.069 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+....+..+.............|. .++++|.++.+.++..+...++..+++ +..|+++||+|||+.+..+.+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~ 97 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGG-ALFGLLADKFGRKPLMMWSIVAYSVGT 97 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 334444444444444444444444 445589999999999999999999998 888999999999999999999999999
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+...+.++.+...+ -.+.|++.+...+....++.|..|+++|+++.++......+|..+++.+.+.+.+.
T Consensus 98 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 98 GLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 98888888776666 57888888989999999999999999999999999999999999998888777654
No 182
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.30 E-value=2.2e-10 Score=108.17 Aligned_cols=135 Identities=15% Similarity=0.103 Sum_probs=113.1
Q ss_pred hhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHH
Q 013707 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (438)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
........+|... +.+|.+..+.+...+...++..+++ +..|+++||+|||+++..+..+..++.+...+.++.+.++
T Consensus 31 ~~~~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~-~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 108 (413)
T PRK15403 31 TTDLIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQ-WLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFL 108 (413)
T ss_pred HHHhhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3334444455544 4589999999999999999999998 7889999999999999999999999998888888877666
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+ -++.|++.+...+.......|.+|+++++++.++.+....++..+||.+++.+.++
T Consensus 109 ~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~ 166 (413)
T PRK15403 109 IARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF 166 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 47778777766677778888999999999999999999999999999999888765
No 183
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.30 E-value=1.4e-10 Score=107.45 Aligned_cols=134 Identities=9% Similarity=-0.147 Sum_probs=102.1
Q ss_pred hhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHH
Q 013707 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (438)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
.+..+...+|.+.+| +|+|+.+.|++.+...++..+++ +..|+++||+|||+++..+......+.......++.+.+.
T Consensus 6 ~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (368)
T TIGR00903 6 IWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALT-IPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLL 83 (368)
T ss_pred HHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 444555666776665 89999999999999999999998 7789999999998876655544444433222224555555
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
. -++.|++.+. .+.......|.+|+++|+++.++.+....+|..+++.+.+.+.+.
T Consensus 84 ~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~ 140 (368)
T TIGR00903 84 ACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA 140 (368)
T ss_pred HHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 4677888775 445555668899999999999999999999999999999988764
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.29 E-value=2.3e-11 Score=113.76 Aligned_cols=137 Identities=18% Similarity=0.177 Sum_probs=114.9
Q ss_pred HHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccch
Q 013707 258 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW 337 (438)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (438)
............|. +++.+|+++.+.+++.+...++..++. +..|+++||+|||+.+..+..+..++.++..+.++.+
T Consensus 7 ~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (379)
T TIGR00881 7 YYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISK-FVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLW 84 (379)
T ss_pred HHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhh-hhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHH
Confidence 33344444555554 555689999999999999999999998 8889999999999999999999999999988888877
Q ss_pred HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhH-hHHHHHH
Q 013707 338 VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL-IFSPLTA 396 (438)
Q Consensus 338 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~-~~g~l~~ 396 (438)
...+ ..+.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 6666 577788888889999999999999999999999999999999999995 4444433
No 185
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.29 E-value=4.4e-11 Score=115.56 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=109.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHh---cccch-----hHHHHHHHHHhhh
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY---RRSIS-----FFYAYYALRTLTA 118 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~---~~~~~-----~~~~l~~~r~l~G 118 (438)
+.+....++......++..++.++.|+++||+|||+.+..+.++.+++.++..+ ..... ....+....+..+
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 315 GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 334455678888888999999999999999999999999988887777666652 11110 1223333333333
Q ss_pred hcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 119 MVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
. ......+....++.|.+|+++|+++++..+...++|.+++|.+.+.+ +|++.|++.++++++..+...+..||+
T Consensus 395 ~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 395 F-FAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred H-HHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 3 22333466777889999999999999999999999999999887763 789999988888777766666667765
Q ss_pred CC
Q 013707 195 VP 196 (438)
Q Consensus 195 ~~ 196 (438)
++
T Consensus 474 ~~ 475 (481)
T TIGR00879 474 KG 475 (481)
T ss_pred CC
Confidence 43
No 186
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=1.6e-10 Score=110.27 Aligned_cols=130 Identities=13% Similarity=0.106 Sum_probs=105.0
Q ss_pred hhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc----cchHHH
Q 013707 265 MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVPY 340 (438)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 340 (438)
.....| ++++ .|.++.+.++..+...++..++. +..|+++||+|+|+.+..+.++.+++.+.....+ +.+...
T Consensus 46 ~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 122 (438)
T TIGR00712 46 FALAMP-YLVE-QGFSKGELGFALSAISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMF 122 (438)
T ss_pred HHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhh-hccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHH
Confidence 344444 5556 49999999999999999999998 8889999999999999998888888877766542 222333
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
. ..+.+++.+...+.....+.|.+|+++||++.|+.+....++..++|.+.+...+.
T Consensus 123 ~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 3 45667777877888888899999999999999999999999999999888766553
No 187
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.29 E-value=1.7e-07 Score=88.06 Aligned_cols=358 Identities=11% Similarity=0.109 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHH-hhhhcccccccCcchHhHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVM-MPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grk~~l~~ 86 (438)
+.+....+..|+..+.+++.-|.=..+.. +..+.......++-+...++..+. .++.+++++|++|++++-+
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~lKD~lvv-------~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~ 79 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDTKDTLVV-------TAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhheee-------cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHH
Confidence 34555666667777777766665433221 111222345677777777777776 8999999999999999988
Q ss_pred HHHHHHHHHHHHHhc--ccchh--------------------------HHHHHHHHHhhhhcchhhHhh-hhhHhhhccC
Q 013707 87 PLTLSIIPLAILAYR--RSISF--------------------------FYAYYALRTLTAMVCEGSINC-LALAYVADNI 137 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~--~~~~~--------------------------~~~l~~~r~l~G~~~~~~~~~-~~~~~i~~~~ 137 (438)
....+.....+.++. |+.+. .|...+..+...+.+ ..... ...++.+|.+
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~-~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG-SVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhcC
Confidence 777777666665554 11000 122223333444422 23333 6788999999
Q ss_pred CccchhHHHHHHHHHHHhhhhhhHhhhHHhh------------HH----HHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 013707 138 SERQRASAFGILLGVLSASFVCGTLAARFLS------------TT----SAFQAATIVSMLAAAYMRVFLKDDVPNDDDD 201 (438)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~------------w~----~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 201 (438)
+.+|-.|..++...+.++|.++|+.+..++. |. ..+.+.++...+. +.+...+.+....+++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~~~~~ 237 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLTDPRS 237 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCccc
Confidence 9999999999999999999999998877653 21 2233333333332 33333343322111110
Q ss_pred CCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCCh
Q 013707 202 DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK 281 (438)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 281 (438)
.+ .++ ++++++.+.+..+.++.+.++|.++.+.+...+++......+...-...++.+. |+
T Consensus 238 ~~---------------~~~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~ 298 (472)
T TIGR00769 238 YN---------------PAL---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SP 298 (472)
T ss_pred cc---------------hhh---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CH
Confidence 00 000 111112244678888889999999988888888887777777666666666553 33
Q ss_pred hHH----HHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH---HHHHhHhcccch----------HHHHHHH
Q 013707 282 NQF----ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI---NMFICSISWSAW----------VPYATTA 344 (438)
Q Consensus 282 ~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~ 344 (438)
.+. |.+....++..++.+ ++.+++.+|+|-+....+.=+...+ +++.+....+.. ......+
T Consensus 299 ~~~~~f~g~~~~~~gi~tl~~~-l~~~~l~~~~Gw~~~a~i~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~ 377 (472)
T TIGR00769 299 NEYSAFMGDFSTWTGVVSVTMM-LLSGNVIRKYGWLTAALITPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVY 377 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHH
Confidence 332 445555666666666 4558999999877654443333322 333332222211 1111111
Q ss_pred HHhh---------hhhhHHHHHHHHhhcCCCCcchhHHHHHhhHh-hhhhhhhhHhHHHHH
Q 013707 345 FSVL---------VVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLT 395 (438)
Q Consensus 345 ~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~g~l~ 395 (438)
.+.. .+...|+-- .+---.++|.|.++=+....+. .+|-..|..+...+.
T Consensus 378 ~g~~~~v~~k~~kYsl~dp~kE-mly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~ 437 (472)
T TIGR00769 378 VGAIQNILSKSTKYSLFDATKE-MAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLL 437 (472)
T ss_pred HHHHHHHHHHHhhhccccHHHH-HhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHH
Confidence 1111 111112111 1222357788888888777554 677777777655543
No 188
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.28 E-value=3.6e-10 Score=106.42 Aligned_cols=148 Identities=11% Similarity=0.041 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+.......+..++.........|.+ ++++|.++.+.|++.+...++..+++ +..+++.||+|+|+.+..+..+.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~-~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMA-IPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3344455555555555555666666 56689999999999999999999999 788999999999999999999999988
Q ss_pred HHhHhc---ccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FICSIS---WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++.... ++.+.... .++.|++.+...+..+.++.+..|++++++..++.+....+|..++|.+.+.+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 776543 34444444 57789999999999999999999999999999999999999999999999988754
No 189
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.28 E-value=1.7e-10 Score=108.66 Aligned_cols=150 Identities=10% Similarity=0.003 Sum_probs=112.9
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
+|.++......++..........++|.|+++++|.++.+.|...+...+...+++ +..|+++||+|||+.+..+.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQ-PLFGLISDKLGLKKHLLWIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4667888888888888888999999999999899999999999999999999999 888999999999999887665554
Q ss_pred HHHHHh---Hhcc----cch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 325 INMFIC---SISW----SAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 325 ~~~~~~---~~~~----~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
++.... .+.+ +.+ .... .++.+++.+...+....+..+..+ +++...|.......+|..++|.++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 157 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILF 157 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhh
Confidence 433322 1111 111 1111 344566666667777777766433 3456778888888999999999999876
Q ss_pred HH
Q 013707 396 AL 397 (438)
Q Consensus 396 ~~ 397 (438)
+.
T Consensus 158 ~~ 159 (396)
T TIGR00882 158 SI 159 (396)
T ss_pred cc
Confidence 53
No 190
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.28 E-value=3e-10 Score=104.62 Aligned_cols=131 Identities=13% Similarity=0.128 Sum_probs=117.4
Q ss_pred chhhHHHHHHHHhHcCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH
Q 013707 263 GGMQASFLYFLKAQFHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 341 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (438)
-....+...++.+.+|+++.+ .|.+.+....+..+.. +.+|+++||+|.|+.+..+.+...+..++.++.++...+.+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666777789999999 9999999999999999 88899999999999999999999999999999877766666
Q ss_pred -HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 342 -TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 342 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
-+++|++.+... ....++.+.+|+++|+++.|..+....+|.++++++.+.+.
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999 99999999999999999999999999999999999999843
No 191
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.26 E-value=9e-11 Score=110.33 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (438)
+.......+............+|.+.++ +.+.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQ-------TLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 4444445555555566666778888754 234455667888888999999999999999999999998775554
Q ss_pred HHHHHH--HHHHhc--ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHH-HHHHHhhhhhhHhhh
Q 013707 90 LSIIPL--AILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAA 164 (438)
Q Consensus 90 ~~~~~~--~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~ 164 (438)
+..+.. ....+. ++ .+.+....++.|+ +.+...+...+++.|.+|+++|+++.+.. +....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLAL-IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHH-HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 443332 222222 33 5666777888888 77778888999999999999999999874 556677888888888
Q ss_pred HHh----h-HHHHHHHHHHH
Q 013707 165 RFL----S-TTSAFQAATIV 179 (438)
Q Consensus 165 ~~~----~-w~~~f~~~~~~ 179 (438)
+.+ + |+..++.....
T Consensus 370 g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHcCcchhHHHHHHHH
Confidence 764 4 77666655444
No 192
>PRK09952 shikimate transporter; Provisional
Probab=99.24 E-value=6.9e-10 Score=105.73 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=108.5
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHH
Q 013707 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (438)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~ 97 (438)
+...++........|.+.++. .+.+......+.....+...++.+..|+++||+|||+.+..+.++..++...
T Consensus 260 ~~~~~~~~~~~~~~~~y~~~~-------~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~ 332 (438)
T PRK09952 260 LCELLTMYIVTAFALNYSTQN-------LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFP 332 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 333444455556667776542 2233333334444556667788899999999999999988887665554433
Q ss_pred HHhcc-cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHH-HHHhhhhhhHhhhHHh------hH
Q 013707 98 LAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLG-VLSASFVCGTLAARFL------ST 169 (438)
Q Consensus 98 ~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~l~~~~------~w 169 (438)
..... +.+..+.+++..++.++ +.+...+...++++|.+|++.|+.+.+.... +..+|..++|.+.+++ +|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~ 411 (438)
T PRK09952 333 FFMALEAQSIFWIVFFSIMLANI-AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSW 411 (438)
T ss_pred HHHHHHcCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 32211 11113444455566677 6677777889999999999999888888544 4557888888888774 37
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 170 TSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
+.++...++..++..+. .+.+||+
T Consensus 412 ~~~~~~~~~~~~i~~v~-~~~~~~~ 435 (438)
T PRK09952 412 HSVAIYLLAGCLISAMT-ALLMKDN 435 (438)
T ss_pred hHHHHHHHHHHHHHHHH-HHHcccc
Confidence 77777776666555444 3455653
No 193
>PRK10133 L-fucose transporter; Provisional
Probab=99.23 E-value=1.6e-09 Score=103.00 Aligned_cols=146 Identities=10% Similarity=-0.007 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+....+..+...+.........|.+ ++.+|.|+.+.++..+...++..+++ +..|++.||+|+|+.+..+..+..++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~-~~~g~l~dr~G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIP-IPAGILMKKLSYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3444555566666666667777776 66799999999999999999999999 888999999999999999999999998
Q ss_pred HHhH---hcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 328 FICS---ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 328 ~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
+++. ..++.+.+.. .++.|++.+...+..+.++.+..|+++++...+..+....+|..++|.+++.+.
T Consensus 106 ~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7753 4556655555 578899999999999999988776666667899999999999999999887765
No 194
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.22 E-value=5.3e-10 Score=104.66 Aligned_cols=161 Identities=11% Similarity=0.112 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.++.+.+..++............|.+.+| .+.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~ 277 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQA--------AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSA 277 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 34444444555555555555666777653 3555667788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHH-HHHHhhhhhhHhhhHHh
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL 167 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~ 167 (438)
+..+++.+.....++ .+.+++..++.|+ +.+...+....++.+. +++++++..+..+ ...++|..+||.++|.+
T Consensus 278 ~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 278 ICGVVRWGLMGSTTA---LPWLIVIQILHCG-TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888888888 8888899999999 8888888888888887 5666788888886 55677888889888875
Q ss_pred ----hHHHHHHHHHHHHHHH
Q 013707 168 ----STTSAFQAATIVSMLA 183 (438)
Q Consensus 168 ----~w~~~f~~~~~~~~i~ 183 (438)
++ ..|+..+.+.++.
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 353 YQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHhccH-HHHHHHHHHHHHH
Confidence 44 4566666555443
No 195
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.22 E-value=7.5e-10 Score=105.04 Aligned_cols=177 Identities=16% Similarity=0.208 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcc--hHh
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AML 84 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk--~~l 84 (438)
.|++...+++.++..-+.+.+......|..+ +++.+..+...+.-+..+...++++++|++.||+|.| +++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-------~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l 352 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATE-------VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL 352 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4566666777777777777777777777654 5666667777778888899999999999999999999 888
Q ss_pred HHHHHHHHHHHHHHHh--------cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhh
Q 013707 85 TLPLTLSIIPLAILAY--------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (438)
Q Consensus 85 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (438)
..+++...+..+...+ .++ -+.+++.-++.|+ ..|...+...++.+|..|+++.+..+|++....-..
T Consensus 353 ~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 353 LISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 8888877555555444 344 6788889999999 889999999999999999999999999999999999
Q ss_pred hhhhHhhhHHh-----hHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 013707 157 FVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 157 ~~~g~~l~~~~-----~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
..+||++-+.+ +-|..+....++.++..+ ....+++++
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~-ll~~v~~~~ 471 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI-LLFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH-HHhhccchh
Confidence 99999988875 357788777766554433 345555543
No 196
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.22 E-value=9.8e-10 Score=105.23 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=97.9
Q ss_pred HHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc----cchHHHH-
Q 013707 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVPYA- 341 (438)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 341 (438)
...| ++.+. |+++.+.++..+...++..+++ +..|+++||+|+|+++..+.++.+++.+.+.+.+ +.+..+.
T Consensus 50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~-~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 3444 56666 9999999999999999999999 8889999999999999999998888888777653 3333333
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhH
Q 013707 342 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (438)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 391 (438)
..+.|++.+...+.....+.+.+|+++|+++.|+.+....+|..+.+.+.
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 46678888877787778888999999999999999999888875544443
No 197
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.21 E-value=6.2e-10 Score=102.04 Aligned_cols=182 Identities=16% Similarity=0.142 Sum_probs=150.5
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcC----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chhhHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH----FNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLS 317 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 317 (438)
.++|.++.++..-+.--++++++...+..|+..+++ +|++++..++..++...-... +++||++||+ |+|+.+.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchhHHHH
Confidence 346778888899999999999999999999998888 999998777777766666666 8889999995 9999999
Q ss_pred HHHHHHHHHHHHhHhcc--cchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc--chhHHHHHhhHhhhhhhhhhHhHH
Q 013707 318 LGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 318 ~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
.|.+++.++.++++..+ ....+++ ..++.++.|..-|...+++.|.+|+++ |-..+++..+..++|+.++|.+.+
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHH
Confidence 99999999999998884 4444554 677789999999999999999998764 567888888999999999999999
Q ss_pred HHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 013707 393 PLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSFYV 433 (438)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
++.++. .....|..+++-+..+++..+..+|+.
T Consensus 177 ~~~~~~--------g~~~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 177 LLAINY--------GWHVGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred HHHHhh--------CHHHHHHHHHHHHHHHHHHHHHccchh
Confidence 998874 334456677777777877777666543
No 198
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=8.7e-09 Score=99.44 Aligned_cols=145 Identities=13% Similarity=0.067 Sum_probs=105.8
Q ss_pred cchhhHHHHHHHH-HHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHH---Hhc-ccchhHHHHHHHHHhhhh
Q 013707 45 ECSLAIYLSGFQQ-AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL---AYR-RSISFFYAYYALRTLTAM 119 (438)
Q Consensus 45 ~~~~s~~~~g~~~-s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~l~~~r~l~G~ 119 (438)
+.+.+..+.|+.. +...++..++.++.|+++||+|||+.+.++.++.++..+.. +.. ++ .+.+...-+++.+
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~---~~~l~~~~~l~~~ 328 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKN---LYSMGAAVFFENL 328 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccc---HHHHHHHHHHHHH
Confidence 3466677888887 46668999999999999999999988777666555443322 232 23 4445555666565
Q ss_pred cchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 120 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
+.+...+...++..+..+++.+++..++.+...++|..+++.+++. .||+..|.+.++++++..+... .++++
T Consensus 329 -~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~-~~~~~ 405 (491)
T PRK11010 329 -CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLL-VCRQT 405 (491)
T ss_pred -HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 5555566778889999999999999999999999998877666665 4899999988888776655443 34543
No 199
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.18 E-value=8e-08 Score=89.08 Aligned_cols=305 Identities=15% Similarity=0.106 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhcc
Q 013707 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (438)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 136 (438)
+++-.....+++++.+.+.|+.|.|..++++...+..-.....+-++ +.+++...+.|+ |.+..+...-.+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~-Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGF-GAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhh-hHHheecccceehhhc
Confidence 56667778888999999999999999999999999888777666665 678899999999 8898898899999999
Q ss_pred CCccchhHHHHHHHHHHHhhhhhhHhhhHHh------------hHH-HH-------HHHH---HHHHHHHHHHHH--Hhc
Q 013707 137 ISERQRASAFGILLGVLSASFVCGTLAARFL------------STT-SA-------FQAA---TIVSMLAAAYMR--VFL 191 (438)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~------------~w~-~~-------f~~~---~~~~~i~~~~~~--~~~ 191 (438)
.++|++.+..++..+....+.++|+.+-..+ +.+ .. +.+. +++..+..+-.. .+.
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999999888888886554321 111 11 1111 111111100000 111
Q ss_pred ccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHH
Q 013707 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (438)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
|.+......+ . .+....+..+...+.++ ++++..+....+..++.........|.
T Consensus 211 p~~~~~~~~~-----------------------~-~~~~~~~~l~~~~~l~~-~~~ml~L~~~f~~tG~~~Sf~~~iypt 265 (461)
T KOG3098|consen 211 PSKDVVNCKS-----------------------S-SETSFSELLKLTFKLLK-TPKMLLLFPFFFYTGLETSFWISIYPT 265 (461)
T ss_pred Cccchhhhhh-----------------------h-ccccHHHHHHHHHHHhc-CHhHHHHHHHHHHHHHHHHHHHhccch
Confidence 1111100000 0 00111123344444444 455555555555555544444555555
Q ss_pred HHHhH--cCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHh---hchhhHHHHHHHHHHHHHHHhHhcc-----------
Q 013707 272 FLKAQ--FHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPI---LGEAKLLSLGLFAACINMFICSISW----------- 334 (438)
Q Consensus 272 ~~~~~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----------- 334 (438)
.+.-. .+.+... .+......+.+.++++ ...+.+.|| +|+++++.++..+..++.++.....
T Consensus 266 ~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~ 344 (461)
T KOG3098|consen 266 CISFTRKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDS 344 (461)
T ss_pred hhhhhhhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcc
Confidence 43222 2333333 3444455566666655 555566654 5777888888877777766655421
Q ss_pred -------cc-hHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHH
Q 013707 335 -------SA-WVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (438)
Q Consensus 335 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 393 (438)
+. ...++..+.|++........+.++.+.. +++|.++.++.-.-+.++..++-.....
T Consensus 345 ~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 345 PPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred cccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 11 1122257788889999999999999888 5888899998888888777766555443
No 200
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.17 E-value=3.3e-09 Score=101.01 Aligned_cols=129 Identities=11% Similarity=0.019 Sum_probs=97.0
Q ss_pred hHHHHHHHHhHcC---CChhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccch--
Q 013707 266 QASFLYFLKAQFH---FNKNQF---ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW-- 337 (438)
Q Consensus 266 ~~~~~~~~~~~~g---~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 337 (438)
..+..+++.++++ .+..+. +..++...++..+++ ++.|+++||+|||+.+..+..+.+++.+..++.++..
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~-~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 119 (432)
T PRK10406 41 YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGG-WLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETI 119 (432)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhH
Confidence 4444455555553 444433 334444555555777 8889999999999999999999999999988877643
Q ss_pred ------HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 338 ------VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 338 ------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
.+.+ -++.|++.+...|...+++.|..|+++||+..+........|..+++.+...+.
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 467899999999999999999999999999999888777777777776654443
No 201
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.17 E-value=2e-08 Score=91.47 Aligned_cols=322 Identities=15% Similarity=0.100 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhh
Q 013707 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV 133 (438)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i 133 (438)
|.+.-+.-++.++..+.+.++.+|+..+.=.....++..++.++.+++++ .+.-+++-.+.++ ++|.......++.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~-ssg~GE~tfL~lt 137 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASL-SSGLGEVTFLSLT 137 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhh-hhhhhHHHHHHHH
Confidence 45666667788888888888999988665556667788889999999998 8888888888898 7777776666664
Q ss_pred hccCCccchhHHHHHHHHHHHhhhhhhHhhhHH---h--hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccc
Q 013707 134 ADNISERQRASAFGILLGVLSASFVCGTLAARF---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPII 208 (438)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~---~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (438)
. .+++ ...+.++++.+.+.++|+..-.. . +.|..+.+...+.++..+..++.+|+++..+..++...+ .
T Consensus 138 ~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~-~ 211 (402)
T PF02487_consen 138 H-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESE-D 211 (402)
T ss_pred H-hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCC-C
Confidence 4 4443 34666777777777777643322 2 347777777766655544445556654332211111000 0
Q ss_pred hhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhh-HHHHHHH-HhHcCCChhHHHH
Q 013707 209 TEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFL-KAQFHFNKNQFAD 286 (438)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~~~ 286 (438)
+. +++... ++....+.+...+..+++-++.. |.+...++-.+...+..+..+ ...|... .....-...+..+
T Consensus 212 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~---k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~ 285 (402)
T PF02487_consen 212 EA-EDDLLE--SETSESKPDSSSKLSFKEKLKRL---KPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRW 285 (402)
T ss_pred cc-cccccc--cccccccccccchhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHH
Confidence 00 000000 00000111111112233322222 222223333333333443332 2223222 1111112233445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH---hHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhh
Q 013707 287 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI---CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSK 362 (438)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 362 (438)
....+.++..+++.-. ..+ |+++.+++.+-..+..+.+++ +-+.++.|...+ ++..|+..|..+......+.+
T Consensus 286 Y~~~YQ~GVFISRSS~-~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSL-PFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred HHHHHHHHHhhhhcce-eee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 5555555555544111 111 333333322222222222222 122345555554 567789999999988888999
Q ss_pred cCCCCcchhHHHHHhhHhhhhhhhhhHhHHHH
Q 013707 363 QVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 363 ~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 394 (438)
..|+++|.-++|........|..++..++-++
T Consensus 363 ~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 363 EVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred cCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999888888877665443
No 202
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=2.7e-10 Score=90.09 Aligned_cols=107 Identities=20% Similarity=0.203 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc
Q 013707 290 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE 368 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (438)
...++..++. +..+++.||++||+.+..+.....++.+.....++.+.... ..+.+++.+...+...++..|..|+++
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 3456666777 78889999999999999998888888887777777665555 577788888888999999999999999
Q ss_pred chhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 369 QGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 369 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
|+++.+..+....++..++|.+.+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 113 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQF 113 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence 99999999999999999999999998764
No 203
>PTZ00207 hypothetical protein; Provisional
Probab=99.15 E-value=4.3e-09 Score=101.51 Aligned_cols=124 Identities=8% Similarity=0.101 Sum_probs=96.4
Q ss_pred HHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc------ccchHHHH-H
Q 013707 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS------WSAWVPYA-T 342 (438)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~ 342 (438)
...+++.+|+|..+.+.+.+.... ....+ +..|++.||+|+|+++.++.++..++.++.++. .+.+.+.+ .
T Consensus 50 s~~L~~~lgls~~~l~~i~svg~~-~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r 127 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVGIA-VGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN 127 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH
Confidence 344567799999999988766333 33445 567999999999999999999999999998886 34555544 4
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.+.|++.+...+.....+.+.+| ++||++.|+......+|.++.+.+...+++
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788888778888888888887 889999999999999999865555554443
No 204
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=3.2e-09 Score=100.14 Aligned_cols=142 Identities=14% Similarity=0.130 Sum_probs=112.2
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chhh-HHHHHHHHHHH
Q 013707 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAK-LLSLGLFAACI 325 (438)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~~~~ 325 (438)
+...+..+.........+|.|++++ |+|.+++|.+...... .+.. ++.|+++||+ |||| .+..+....++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~-~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFK-FLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHH-HHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4455666677777788899999985 9999999998665554 4666 7888999999 6765 67888888877
Q ss_pred HHHHhHhccc---chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 326 NMFICSISWS---AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 326 ~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
+...+.+.++ .+.+.. .++.+.+.....+...+++.|..|+|+|+++.++......+|..+++.+.+.+.+.
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 7777766532 333333 34556777778899999999999999999999999999999999999999888774
No 205
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.13 E-value=2.7e-09 Score=103.28 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=98.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc---------ccc---hHHHH-HHH
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WSA---WVPYA-TTA 344 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~-~~~ 344 (438)
+.++.+.++..+...++..+++ ++.|+++||+|||+.+..+..+..++.+..++. ++. +.++. -++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~-~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGG-ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 8888999999999999999999 888999999999999999999888887766652 111 12223 477
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
.|++.+...+...+++.|.+|+++||++.++.+....+|..+++.+.+.+.
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999988877665554
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=3.6e-09 Score=98.15 Aligned_cols=160 Identities=11% Similarity=0.080 Sum_probs=111.4
Q ss_pred hhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chhhH-HHHHHHHHHHHHHHhHhccc--
Q 013707 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKL-LSLGLFAACINMFICSISWS-- 335 (438)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~-- 335 (438)
......|.+.+| .|+|.++.|..... .+...+ . ++.|++.||+ |||+. +..+.+..++....+.+..+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~-~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-K-FLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-H-HHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 345567888877 69999999998644 444443 5 7888999997 78775 56677777777666666543
Q ss_pred -chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHH
Q 013707 336 -AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIM 413 (438)
Q Consensus 336 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~ 413 (438)
.+.... ..+.+.+.....+...+++.|.+|+|+|+++.|+......+|..+++.+.+.+.+..+.+....+.....+.
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 222222 345566777778999999999999999999999999999999999999999988775422111111233455
Q ss_pred HHHHHHHHHHHHHH
Q 013707 414 CIGLASVRAFTYEL 427 (438)
Q Consensus 414 ~~~~~~~~~~~~~~ 427 (438)
+.+++.++.....+
T Consensus 162 i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 162 WTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555444444
No 207
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=2.3e-09 Score=99.37 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=107.4
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA- 341 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 341 (438)
......+|.+.++ +|+|+.+.++..+...++..++. +..|++.||+|+|+.+..+.....++.+.. ..++.+....
T Consensus 17 ~~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLA-PLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 3445566776665 89999999999999999999999 888999999999999999888877777666 5555555444
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 342 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.++.+++.+...+.....+.|..| ++|+++.|..+....+|..+++.+.+.+.+.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466777777777777777888776 6899999999999999999999999988775
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.12 E-value=3.8e-09 Score=98.32 Aligned_cols=179 Identities=15% Similarity=0.205 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.+...++..++...+.+.+....+.|.++. + +.+....|.+.++..++-++.-...+++..|+|.|+++.++.
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~---g----g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQEL---G----GYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---c----cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 455566677778888888888888888754 1 133345577777778888888889999999999999999999
Q ss_pred HHHHHHHHHHHhc-ccchh-HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHH-HHhhhhhhHhhhH
Q 013707 89 TLSIIPLAILAYR-RSISF-FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAAR 165 (438)
Q Consensus 89 ~~~~~~~~~~~~~-~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~l~~ 165 (438)
+..++=..+.+.. ++... +........++|+ +-+....+...++.+..|++.|+++.++++.. .++|..+|..++|
T Consensus 281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~-tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGL-TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999998887 44111 1223444667999 88999999999999999999999999998864 6899999999998
Q ss_pred Hh----------hHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 013707 166 FL----------STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 166 ~~----------~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
++ .|...+.+.+.+.++..++.+++.||++
T Consensus 360 ~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 360 WLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 74 3455666677766666666666666653
No 209
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.12 E-value=2e-09 Score=101.14 Aligned_cols=164 Identities=10% Similarity=0.032 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHH-HHHHHHhhhhcccccccCcchHhHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIG-LGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~-l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
++......++...+........+.+.+ |.+.+..+.|++..... ....++.++.|++.||+|+|+.+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~--------~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLV--------DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHH--------hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 344444555555656666666777765 34666778898887775 466677889999999999999998877
Q ss_pred HHHHHHHHHHHh------cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCc-cchhHHHHHHHHHHHhhhhhhH
Q 013707 89 TLSIIPLAILAY------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGT 161 (438)
Q Consensus 89 ~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~ 161 (438)
.+.++....... .++ ...+.....+.++ +.+...+...+...+..++ +++++.++..+...++|..+||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~ 357 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPG---IAVAWSCSAFGSL-ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIAS 357 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHH
Confidence 665333222221 122 3344455556666 5666767777887777776 8899999999999999999999
Q ss_pred hhhHHh----hHHHHHHHHHHHHHHHHH
Q 013707 162 LAARFL----STTSAFQAATIVSMLAAA 185 (438)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~ 185 (438)
.+++.+ |++..|+..+.+.++..+
T Consensus 358 ~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 358 SIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 998864 778888888776655433
No 210
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.11 E-value=6e-09 Score=90.47 Aligned_cols=350 Identities=15% Similarity=0.075 Sum_probs=214.6
Q ss_pred HHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhH
Q 013707 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS 144 (438)
Q Consensus 65 ~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~ 144 (438)
.+.-.+.=.+.|..-.|++++.-.+.......+..+.++ .+.+=+.-+..|. . .+...+.++++-+..+++++.+
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~-~-tAaEIAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGP-A-TAAEIAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcCh-H-HHHHHhhhheeeeecCHHHHHH
Confidence 333344445889998999999888877888888889999 8888888899998 4 4455689999999999999999
Q ss_pred HHHHHHHHHHhhhhhhHhhhHHh------hHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCC
Q 013707 145 AFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQN 218 (438)
Q Consensus 145 ~~~~~~~~~~~g~~~g~~l~~~~------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (438)
+.+...++.-.|...|..++..+ ++...=.+......++ .....++|..+++.-.+.+.++.. .. +.
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia-~~~A~fLP~v~rSl~f~~~~~~~~---v~---~~ 203 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIA-VLLALFLPRVKRSLYFHRLEDKIS---VG---DL 203 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHH-HHHHhhCCCCchhhhhhcccccce---ec---cc
Confidence 99999999999888888888764 2232222332222222 334456776654322111111100 00 00
Q ss_pred CCCCCCCccccccCCchhH---HHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcC-CChhHHHHHHHHHHHH
Q 013707 219 ESNSPVKIPVCKKIPSIRD---LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH-FNKNQFADLMLIAGLA 294 (438)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 294 (438)
++..+..+.....+..++. -+....+||.+....+=..+...++..+..+....-++... -.....|..-++..+.
T Consensus 204 e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlL 283 (433)
T KOG3810|consen 204 EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLL 283 (433)
T ss_pred hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHH
Confidence 0000000000000011111 12234467777776666677777777777666666655421 1122236666677777
Q ss_pred HHHHHHHHHHHHHHhhchh--hHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchh
Q 013707 295 GTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (438)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (438)
++++. +..|.+.-++.|. .++.++.+..+...+.+...++.|..++ -.++........+.....+.+..+.|.-|-
T Consensus 284 Ga~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gL 362 (433)
T KOG3810|consen 284 GAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGL 362 (433)
T ss_pred HHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhee
Confidence 77777 6777765444443 3566667777777778888888888888 456667777777777777888888899999
Q ss_pred HHHHHhhHhhhhhhhhhHhHHHHHHHHh---cCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 013707 372 AQGCISGISSFANIVSPLIFSPLTALFL---SKGAPFNFPGFSIMCIGLASVRAFTYELLLS 430 (438)
Q Consensus 372 ~~g~~~~~~~~g~~~g~~~~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (438)
.+|++..+.-+-+.+-..+ ..|..+ +....+...+..|+..+++.++.....+...
T Consensus 363 vFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~ 421 (433)
T KOG3810|consen 363 VFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMC 421 (433)
T ss_pred eeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHh
Confidence 9998877765444443322 233211 1222333445567777777777765544433
No 211
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.11 E-value=9.6e-11 Score=105.81 Aligned_cols=149 Identities=11% Similarity=0.136 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (438)
+..+.+...+...-.+..-..++ =.++.+|.++...|++.....+..++.+ ++.|.+.||+.|++++.+|..+..++.
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~-~v~~~fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLK-EVQTYFNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhH-HHHHhcCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 33344444444443333333222 2345589999999999999999999999 889999999999999999999999999
Q ss_pred HHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
+..++..+.|.+.+ -.+.|+|.+...|..+++++|.+|+++|++++++.+.....|..+|-..++.+.++.
T Consensus 113 ~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 113 FASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 99999988887777 589999999999999999999999999999999999999999999988888777664
No 212
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.11 E-value=7.3e-10 Score=98.09 Aligned_cols=144 Identities=16% Similarity=0.170 Sum_probs=125.3
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHH
Q 013707 277 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPS 355 (438)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 355 (438)
.+-+..++|++++...+...+.+ ++.|.+.||+|+|..+++|+..+..+.+++++..+.+..++ -.+.|++.++....
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvn-p~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVN-PFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhc-ccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 45567788999999999999999 88899999999999999999999999999999998887766 58999999999999
Q ss_pred HHHHHhhcCCCCc-chhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 013707 356 FRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLL 429 (438)
Q Consensus 356 ~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (438)
..+++.|.+|+|. |++++|+.-....+|-.+||+++|.+||.. ....+|++.++++++-..+.+++
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~--------Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA--------GKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc--------CCcCcHHHHHHHHHHHHHHHHhe
Confidence 9999999999875 699999999999999999999999999974 34556777777776666555443
No 213
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.09 E-value=5.9e-10 Score=110.16 Aligned_cols=136 Identities=13% Similarity=0.157 Sum_probs=113.1
Q ss_pred chhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc--------
Q 013707 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-------- 334 (438)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 334 (438)
.++....-.-++++++++..+.|++.+...++..+.. +..+++.||.+|++.+.++.++.+++.+++++.+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 3333333334556699999999999999999999988 7778999999999999999999999998887652
Q ss_pred -----------------------------------------c-ch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcch
Q 013707 335 -----------------------------------------S-AW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQG 370 (438)
Q Consensus 335 -----------------------------------------~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 370 (438)
+ .+ .+++ -++.|++.+...+...+++.|.+|+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 0 12 2222 47889999999999999999999999999
Q ss_pred hHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 371 KAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 371 ~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
...|+.+....+|..+|+.+++.+.+.+.
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~ 236 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYV 236 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccc
Confidence 99999999999999999999999987643
No 214
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=2.4e-09 Score=114.88 Aligned_cols=162 Identities=12% Similarity=0.063 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHH-HHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIY-LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
++...+..++...........+|.+..+ +++.+.. ..|++.+...++.++++++.|+++||+++|+.+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~ 306 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKE-------VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA 306 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHH-------HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH
Confidence 3333344444444444555667777654 2344445 7799999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
++.+++.++..+..+ .+.+++..++.|+ +.+...+...+++.+..|+++|+++++..+....+|..+++.+++.+
T Consensus 307 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 307 LGLALSLFLLPTAPS---LASVLVLFFLFGF-SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHhhh---HHHHHHHHHHHHH-HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887777 7788888899999 77888888899999999999999999999999999988887777654
Q ss_pred ----hHHHHHHHHHHHHHH
Q 013707 168 ----STTSAFQAATIVSML 182 (438)
Q Consensus 168 ----~w~~~f~~~~~~~~i 182 (438)
++...|++.+.+.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 383 GLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhccCHHHHHHHHHHHHHH
Confidence 344455555444333
No 215
>TIGR00898 2A0119 cation transport protein.
Probab=99.08 E-value=3.2e-09 Score=103.39 Aligned_cols=135 Identities=18% Similarity=0.153 Sum_probs=103.9
Q ss_pred HHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC
Q 013707 59 IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS 138 (438)
Q Consensus 59 ~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 138 (438)
...+....+.++.+++.||+|||+.+.++.++.+++.++..+.++.. .+...+.-++.++ +.+...+..+.+..|.+|
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKF-GITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHH-HHHHHHHHHHHHhccccc
Confidence 44566777888899999999999999999999888888888776521 2344444555555 556666788899999999
Q ss_pred ccchhHHHHHHHHHHHhhhhhhHhhhHH--hhHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 013707 139 ERQRASAFGILLGVLSASFVCGTLAARF--LSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (438)
Q Consensus 139 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~--~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 196 (438)
++.|+.++|+.+....+|.+++|.+.+. .++..++++.+...++..+. .+++||++.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 499 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGIL-TLFLPETKG 499 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHcCcCCCC
Confidence 9999999999999999999999998873 24566777777766555444 456787654
No 216
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.3e-09 Score=96.02 Aligned_cols=117 Identities=14% Similarity=0.031 Sum_probs=100.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHH
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSF 356 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 356 (438)
+.+....|++-+.+++...+.+ ...|.++||+|||.++..|.+..++..++.+.+.+...+.. -++.|+..+. ....
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS-~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~ 141 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISS-PLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVI 141 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhh-hhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHH
Confidence 3455667889999999999998 88899999999999999999999999999998888844444 3555665554 4557
Q ss_pred HHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 357 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 357 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.++++|.+++|+|+.+++..++..++|-++||.++|++.+
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7999999999999999999999999999999999999988
No 217
>PRK15075 citrate-proton symporter; Provisional
Probab=99.08 E-value=7.8e-09 Score=98.54 Aligned_cols=147 Identities=14% Similarity=0.045 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHH-HHHH-----HHHHHHHHHHHHHHHHhhchhhHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM-LIAG-----LAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (438)
.....+..++...-........|...++ ++.++.+.+... +... +...+++ +..|++.||+|||+.+..+..
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~-~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGA-IVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHH-HHHHHHhhhhchHHHHHHHHH
Confidence 3444555566666666666666655554 788777654332 2211 1123455 777999999999999999999
Q ss_pred HHHHHHHHhHhcccchH--------HHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 322 AACINMFICSISWSAWV--------PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
+..++.++..+.++.+. +.+ -++.|++.+...+....++.|.+|+++|+++.++.+...++|..+++.+++
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887653 222 467788888888888899999999999999999999999999888888877
Q ss_pred HHHH
Q 013707 393 PLTA 396 (438)
Q Consensus 393 ~l~~ 396 (438)
.+..
T Consensus 175 ~l~~ 178 (434)
T PRK15075 175 LLNQ 178 (434)
T ss_pred HHHH
Confidence 7654
No 218
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.9e-09 Score=96.72 Aligned_cols=176 Identities=13% Similarity=0.171 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
++++...+++.++..=+.+.....-..+. ..+++++..+..++...-.+..+++++++|++.||+|.|+++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg-------~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFG-------AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHH-------HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 34555556666665555555554555553 34778888888998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
++++..+.++...+... -..+.+.-.+.|. ..|..+..+.++..+..|+++-++.+|+++.....+..+||.+-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~-s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 324 GLVILSIAALYLIFLEG---ELDFWILGLLVGT-SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99998888887777666 4556677788898 7889999999999999999999999999999999999999998877
Q ss_pred h-----hHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 167 L-----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 167 ~-----~w~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
+ +-|..+....++..+. +.....+|++
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iG-l~~L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIG-LLLLLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhh-HhhEEeecCC
Confidence 5 3466665555443333 3334455554
No 219
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.06 E-value=1.5e-08 Score=92.85 Aligned_cols=183 Identities=11% Similarity=0.057 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|+++.+.+........+.......|.|..+.. ++.+.+....|++.+..-+.-.+.-.+..++.+|+|.|+.++++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f----~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla 295 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF----QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH
Confidence 34444333333332333444445677766542 34456667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHH-HHHHHhhhhhhHhhhHH
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAARF 166 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~~~ 166 (438)
..+.++=...++++++ .+.+.+.+.+.|+ --+.......-|+++.+|+|..++...+. +.+.++|..+.+.++|.
T Consensus 296 g~i~~iRi~~~~~~~~---~~~i~~~klLH~~-e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 296 GVIMAIRIIGSGFATN---PWVISLIKLLHAL-EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHT--S---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 9999999999999999 9999999999999 78888999999999999988877777764 57778888888877776
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013707 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (438)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 198 (438)
+|.+..|++.+.+.+...++..+.++++++..
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 48888999999988888888888888765543
No 220
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.06 E-value=1.5e-08 Score=98.35 Aligned_cols=143 Identities=15% Similarity=0.034 Sum_probs=110.6
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhH----cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 013707 253 VVAFFSGLSEGGMQASFLYFLKAQ----FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (438)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (438)
+..+..+.-........|..-.+. .+.+..+.+++.+...++.+++. ++.++++||+|||+.+..+.++..++.+
T Consensus 23 ~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~-~~~g~l~d~~Grr~~~~~~~~~~~v~~~ 101 (502)
T TIGR00887 23 VGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQ-LFFGWLADKLGRKRVYGMELIIMIIATV 101 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 333444444444444455443321 23455667888999999999998 8889999999999999999888888887
Q ss_pred HhHhccc------chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 329 ICSISWS------AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 329 ~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
+..+..+ .+.+.+ -++.|++.+...+....++.|.+|+++||++.++.+....+|..+++.+...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 102 ASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred HHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776554 233333 5788999999999999999999999999999999999999999999988877654
No 221
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.06 E-value=5.2e-09 Score=93.92 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=114.0
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (438)
|+++...+........+ .....+...+++.+|+|+.|.+++.+...+.+.+.+ +..+.+.||+|.|++...+.++..+
T Consensus 14 ~~L~~S~~af~v~F~VW-~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallR-l~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 14 RNLWLSTLAFDVGFMVW-TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLR-LPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHH-HHHHhhhcccCchHHHHHHHHHHHH
Confidence 44444443333333333 333444455557799999999999999999999999 7778999999999999999999999
Q ss_pred HHHHhHhcccch---HHHHH-HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 326 NMFICSISWSAW---VPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 326 ~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
-.+...++.+.+ .++.. .+.|+ .+..+......+++.+|||++|.++|++. .+++|..+...+...+....
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 988888876554 55543 33443 34456667788899999999999999998 99999999988888887764
No 222
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=3.7e-09 Score=101.04 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|.++.+.+..++...+........+.+.++. .+ +....+++.+...++..++.+++|+++||+|||+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYV-------LG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeee-------cC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 4445555555555555554444444443321 12 223456777788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC-------ccchhHHHHHHHHHHHhhhhhh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-------ERQRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g 160 (438)
..+.+++.+...+.++ ..+.+++..++.|+ +.+...+...++++|..| ++++|...|+.+....+|..+|
T Consensus 294 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGS--NLPLILVLIILAGF-GQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcch--hHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 8888888777766542 15666777788888 778888889999999876 4567899999999999999999
Q ss_pred HhhhHHh
Q 013707 161 TLAARFL 167 (438)
Q Consensus 161 ~~l~~~~ 167 (438)
+.+.+.+
T Consensus 371 ~~i~g~l 377 (437)
T TIGR00792 371 GFLVGLI 377 (437)
T ss_pred HHHHHHH
Confidence 8887763
No 223
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.05 E-value=2.4e-09 Score=103.15 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=105.6
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc--ccchHHHH-HHHHHhhhhhh
Q 013707 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFA 352 (438)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~ 352 (438)
++++++.+.|.+.+...++..+++ +..|++.||+|+|+.+..+.++..++.++..+. .+.+..++ -++.|++.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQ-IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHH-cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 478999999999999999999999 888999999999999999988888777666443 33444444 57889999999
Q ss_pred HHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.|....++.+.+|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999988765
No 224
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.01 E-value=6.1e-09 Score=111.48 Aligned_cols=160 Identities=13% Similarity=0.009 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.++...+..+...+..+.....+|.|.++. ++.+....|++.+.+.++.++++++.|+++|+.++++.+..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~ 298 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKET-------LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGA 298 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHH
Confidence 444455555555555555666788887653 3555678899999999999999999999999888877766666
Q ss_pred HHHHHHHHHHHhc--------------------ccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHH
Q 013707 89 TLSIIPLAILAYR--------------------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI 148 (438)
Q Consensus 89 ~~~~~~~~~~~~~--------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 148 (438)
++.++..+...+. ++ .+.+++..++.|+ +.+...+...+++.+.+|+++||+++|.
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~G~v~g~ 374 (1140)
T PRK06814 299 LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRILIDLFGLAA-AGGLYIVPLFAALQAWANPAHRARVIAA 374 (1140)
T ss_pred HHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHHHHHHHHHHH-HHHHhHHHHHHHHHhhCCcccceeeeHH
Confidence 6655555444442 44 6777888888999 7888888899999999999999999999
Q ss_pred HHHHHHhhhhhhHhhhHHh-----hHHHHHHHHHHH
Q 013707 149 LLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (438)
Q Consensus 149 ~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~~~~ 179 (438)
.+....+|..+|+.+.+.+ +....+++.+.+
T Consensus 375 ~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 375 NNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999887764 345555554444
No 225
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.00 E-value=1.9e-08 Score=95.02 Aligned_cols=145 Identities=12% Similarity=0.058 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hhchhhHHHH-HHHH
Q 013707 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGEAKLLSL-GLFA 322 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~-~~~~ 322 (438)
+.......+-..+.+.....+.++|+++ +|.++.+.+.+.....+...+.+ ++.|+++| |+|||+..+. +...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~-Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQ-PLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3444455555667777778888998866 89999999999999999999999 88899999 5999988766 4666
Q ss_pred HHHHHHHhHhcccch-----------------HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcc--hhHHHHHhhHhhh
Q 013707 323 ACINMFICSISWSAW-----------------VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQ--GKAQGCISGISSF 382 (438)
Q Consensus 323 ~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~ 382 (438)
..+++.++++..+.. .... ..+..+......++..+++.|.+|+++| +.+.++.+....+
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 677777777654421 1111 2344567777888889999999998865 6799999999999
Q ss_pred hhhhhhHhHHHH
Q 013707 383 ANIVSPLIFSPL 394 (438)
Q Consensus 383 g~~~g~~~~g~l 394 (438)
|+.+|+.+++..
T Consensus 164 G~ilg~~~g~~~ 175 (477)
T TIGR01301 164 GNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHH
Confidence 999999988865
No 226
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.96 E-value=3.8e-08 Score=87.93 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=120.2
Q ss_pred HHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc
Q 013707 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (438)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (438)
..|+.+......+..+-+.+++.++.+..+++++......+..+.+ +-.+++.||+|.|+-+..|+.+.++++.++.-+
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~-lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMS-LPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Confidence 3344444444556677778888899999999999999988888888 778899999999999999999999999998754
Q ss_pred cc--ch-HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 334 WS--AW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 334 ~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.+ .+ .+.. .++.+.|.+...+..+.+++..-|++....-+.+.+.++.+|.+++|.+++.+..+
T Consensus 99 a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 99 ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 43 22 3333 47778999999999999999999998889999999999999999999999999884
No 227
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.96 E-value=9.4e-09 Score=98.25 Aligned_cols=172 Identities=18% Similarity=0.274 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccC--cchHhH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLT 85 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G--rk~~l~ 85 (438)
+.+..+.+...+..++.....-.+|.+.+ +.+.+..+...+.++..+...++.+..|+++|+.. ++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~--------~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK--------SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 34556667777777887777777888865 44555577789999999999999999999999988 455666
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
++++..+++...++++++ ++.+...-.+.|+ +.|.........+.|..+.++.+.+.|+.....+++.++||.+++
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~-~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGF-CVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 788888888889999999 8999999999999 888888777789999999999999999999999999999999998
Q ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHHHhcc
Q 013707 166 FL-----STTSAFQAATIVSMLAAAYMRVFLK 192 (438)
Q Consensus 166 ~~-----~w~~~f~~~~~~~~i~~~~~~~~~~ 192 (438)
++ +|...|+..+...++.... ++..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~-~~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVL-LLILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHH-HHHhH
Confidence 75 4888999888886665433 34444
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.95 E-value=4.9e-09 Score=100.39 Aligned_cols=150 Identities=11% Similarity=0.080 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (438)
|.+....+..++...+........|.+.++ ..+.+....++......++..++.++++++.||+|+|+.+.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g 300 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRY-------VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG 300 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEee-------ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 445555555566666555555555555443 2333444444545555677888999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc-------chhHHHHHHHHHHHhhhhhh
Q 013707 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASFVCG 160 (438)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g 160 (438)
.++..++.+...+.++.+ .+.+++..++.|+ +.+...+...++.+|..|++ ++|...|..+....+|..+|
T Consensus 301 ~~~~~i~~~~~~~~~~~~-~~~~~~~~~l~g~-G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 301 ALLGTCGYLLFFWVSVWS-LPVALVALAIASI-GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHHHHHHHHHHHHcCchh-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 988888877777654322 5666777888899 88888899999999998754 35888899999999999998
Q ss_pred HhhhHH
Q 013707 161 TLAARF 166 (438)
Q Consensus 161 ~~l~~~ 166 (438)
+.+.+.
T Consensus 379 ~~i~g~ 384 (448)
T PRK09848 379 GSIPAF 384 (448)
T ss_pred HHHHHH
Confidence 887765
No 229
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=7.7e-08 Score=90.06 Aligned_cols=153 Identities=16% Similarity=0.127 Sum_probs=109.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccch-----hHH-HHHHHHHhhh
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSIS-----FFY-AYYALRTLTA 118 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~-----~~~-~l~~~r~l~G 118 (438)
+.+++....-++.........+.+++...+.||+|||+.++.+..+..+..+++....... +.. ..+++.++..
T Consensus 299 ~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 299 TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3455556666777777888889999999999999999999999998888877766542111 111 2233444433
Q ss_pred hcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhh----HhhhHHhhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 119 MVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 119 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~l~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
++-+-+..|...-+.+|.+|++.|+.++++......+...+- |.+-..+|- ..|.+..+.+++..++.++.+||+
T Consensus 379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 322233457889999999999999999999888776665443 444444555 667777777788888899999999
Q ss_pred CCCC
Q 013707 195 VPND 198 (438)
Q Consensus 195 ~~~~ 198 (438)
+.+.
T Consensus 458 kgr~ 461 (485)
T KOG0569|consen 458 KGRT 461 (485)
T ss_pred CCCC
Confidence 7544
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.88 E-value=5.3e-08 Score=92.67 Aligned_cols=148 Identities=18% Similarity=0.184 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|.+..++...++..++..+.....+.+.++.++.+ ...+.+..+..++..++.+++++++||+|+|+.+..
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE--------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 466777788888888898888888888888754222 244677778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc--cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc-------chhHHHHHHHHHHHhhh
Q 013707 87 PLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASF 157 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~ 157 (438)
+..+.+++.++..+.+ + .+.+++.-++.|+ +.+...+...++++|..+.+ +.|..+|..+....+|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi-~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGS---PWLVLILFILAGI-GYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred hHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHh-hhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 9999999999888886 6 8899999999999 88888899999999999843 34777788888888888
Q ss_pred hhhHhhhHH
Q 013707 158 VCGTLAARF 166 (438)
Q Consensus 158 ~~g~~l~~~ 166 (438)
.+++.+.+.
T Consensus 372 ~la~~i~g~ 380 (428)
T PF13347_consen 372 GLAGAIVGL 380 (428)
T ss_pred HHHHHHHHH
Confidence 887776654
No 231
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.87 E-value=1.1e-07 Score=85.82 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
......+..++...........++.|.++ .+..+.+..+.++..+.+..+..++.+..+++.||+|+|+.+.++.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~-----~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSD-----PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 34444444444444555556667777763 2245677788899999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
.+..++.++....++ .... ..-++.|+ +.+...|...+...+..|++ .+++.++. ....+|..++|.+.|.+
T Consensus 216 ~l~~~~~~l~~~~~~---~~~~-~~~~l~g~-~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 216 FLAVLLSIGAALTHG---YVAM-WFVLALGL-FNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHcCC---HHHH-HHHHHHHH-HHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 887777766665554 2222 34457788 78889999999998888753 45666665 55668889999877664
Q ss_pred ---hHHHHHHHHH
Q 013707 168 ---STTSAFQAAT 177 (438)
Q Consensus 168 ---~w~~~f~~~~ 177 (438)
|.+..|++..
T Consensus 289 d~~g~~~a~~v~~ 301 (310)
T TIGR01272 289 DCLGIQLAFALPV 301 (310)
T ss_pred HhccchHHHHHHH
Confidence 5566666443
No 232
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.85 E-value=3.2e-08 Score=95.35 Aligned_cols=150 Identities=13% Similarity=0.113 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|.+..++...++......+.....+.+.++.. + +....+++.+...++.+++.+++++++||+|||+.+..
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAIYYFTYVI-------G-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAG 301 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 345555566666666666666555555543221 1 12345667777778889999999999999999999998
Q ss_pred HHHHHHHHHHHHHh---cccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCc-------cchhHHHHHHHHHHHhh
Q 013707 87 PLTLSIIPLAILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-------RQRASAFGILLGVLSAS 156 (438)
Q Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g 156 (438)
+..+..++.+...+ .++ +..+.+++.-++.|+ +.+...+...++++|..|. ++.|..++......-+|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~g~-~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGLAAP-HNALLIVIAGILLNI-GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 88776666554432 121 125666777788888 7788888899999999773 33455788888888888
Q ss_pred hhhhHhhhHH
Q 013707 157 FVCGTLAARF 166 (438)
Q Consensus 157 ~~~g~~l~~~ 166 (438)
..+|+.+.+.
T Consensus 380 ~al~~~i~g~ 389 (473)
T PRK10429 380 SAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHH
Confidence 8888877765
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.81 E-value=2.5e-07 Score=83.67 Aligned_cols=161 Identities=23% Similarity=0.303 Sum_probs=122.2
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHH
Q 013707 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (438)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (438)
.....+....+.....+..+.+..+... +. . . ...++..+.+.++..++.++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSL---SS-G-R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCC---Cc-h-h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 3444455556777777777777664311 11 0 0 456889999999999999999999999999988888887655
Q ss_pred HHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCc-cchhHHHHHHHH-HHHhhhhhhHhhhHHh---
Q 013707 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLG-VLSASFVCGTLAARFL--- 167 (438)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~l~~~~--- 167 (438)
.+.+...+..+ ...+.+.+.|+.+|+ +.+...+...+++.|+.|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGL-GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666654 337899999999999 8888889999999999998 688999998888 5788888888777653
Q ss_pred ---hHHHHHHHHHHHHH
Q 013707 168 ---STTSAFQAATIVSM 181 (438)
Q Consensus 168 ---~w~~~f~~~~~~~~ 181 (438)
+||..|........
T Consensus 159 ~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 159 LLWGWRAAFLLAALLGL 175 (338)
T ss_pred HhcchHHHHHHHHHHHH
Confidence 68886666655543
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.81 E-value=2.4e-07 Score=89.08 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=91.2
Q ss_pred hHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHH
Q 013707 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTA 344 (438)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (438)
...++....+ .|-++.. .++.....+...+.. ++.|+++|.+|||..++.+.++..++.++.+.+++....+. ..+
T Consensus 64 a~~l~~I~~d-iG~~~~~-~w~~~~~~l~~av~~-~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l 140 (599)
T PF06609_consen 64 ASILPYINAD-IGGSDNW-SWFSTAWTLASAVSF-PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVL 140 (599)
T ss_pred HHHHHHHHHh-cCCCccc-hHHHHHHHHHHHHHH-HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHH
Confidence 3444544444 6766544 677777888888877 78899999999999999999999999999999998887777 678
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHH
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 392 (438)
.|++.+.... ....++|..|.+.|+...++.....-.....+|.+..
T Consensus 141 ~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~ 187 (599)
T PF06609_consen 141 YGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQ 187 (599)
T ss_pred HHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHH
Confidence 8888666654 4556899999999987776555443333334444443
No 235
>PRK09669 putative symporter YagG; Provisional
Probab=98.75 E-value=7.5e-08 Score=92.11 Aligned_cols=144 Identities=12% Similarity=0.123 Sum_probs=106.2
Q ss_pred HHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-hhHHHHHHHHHHHHHHH
Q 013707 255 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGE-AKLLSLGLFAACINMFI 329 (438)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~~~~~~~~~~~~ 329 (438)
.+..+........+++.|+.+.+|+|+..+|.+..+..+...+.. ++.|+++|| +|| |+.+..+.+..+++..+
T Consensus 18 ~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~d-p~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l 96 (444)
T PRK09669 18 DTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTD-PLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLL 96 (444)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccc-ceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 344444556667888999999999999999999999999999999 888999998 565 45666777777666655
Q ss_pred hHhcccc------hHHHH-HHHHHhhhhhhHHHHHHHHhhcC-CCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 330 CSISWSA------WVPYA-TTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 330 ~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
....++. +...+ ..+.+.+......+..++..|.. ++++|++..+.......+|..+++.+...+....+
T Consensus 97 ~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~ 174 (444)
T PRK09669 97 TFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILG 174 (444)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5444321 11111 23445556666677778888877 45789999999999999999999888777776543
No 236
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1e-07 Score=90.05 Aligned_cols=123 Identities=12% Similarity=0.116 Sum_probs=110.5
Q ss_pred HhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhccc--chHHHH-HHHHHhhhh
Q 013707 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS--AWVPYA-TTAFSVLVV 350 (438)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~ 350 (438)
++.+++++.+-+++++....+.++++ +-.+++.||+|.|+++..+.++.+++.++..++.+ .+.+++ -++.|++.+
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~-iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQ-IPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHH-cCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 34589999999999999999999999 77789999999999999999999999998888653 333333 588999999
Q ss_pred hhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 351 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
..+|....+..+-.|+++|++..++.....++|.+++-++.|.+-+.
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s 190 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES 190 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 99999999999999999999999999999999999999999999886
No 237
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4.7e-06 Score=73.85 Aligned_cols=351 Identities=12% Similarity=0.016 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccc-----ccCcc
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRK 81 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grk 81 (438)
++++..+.+...+.....++.. .+|.+.+.. +.|....+.. +..... ..--+.|.++.| |+|||
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~f-S~ay~P-~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAIF-SFAYWP-FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhhh-hhhhhH-HHHHHHHHhhhHHHHHHhhccc
Confidence 4567777777778888888888 889887621 2222222321 111222 223567999999 99999
Q ss_pred hHhHH-HHHHHHHHHHHHHhcccc------h--hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHH
Q 013707 82 AMLTL-PLTLSIIPLAILAYRRSI------S--FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152 (438)
Q Consensus 82 ~~l~~-~~~~~~~~~~~~~~~~~~------~--~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 152 (438)
|..++ +..+....+...+.-.+. . ....+-..-++.-+ ..+....+...+.-...++++.+-+......+
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnf-laAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNF-LAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHH-HHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 98765 333333333333322110 0 02222223344455 55677778888888888888888877777777
Q ss_pred HHhhhhhhHhhhH----------Hh-hH---------HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhcc
Q 013707 153 LSASFVCGTLAAR----------FL-ST---------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEET 212 (438)
Q Consensus 153 ~~~g~~~g~~l~~----------~~-~w---------~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (438)
.+.|..+|..+-- ++ +| ..-.++.+.+.+++-.+..+.-+|.+++..++
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----------- 246 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----------- 246 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-----------
Confidence 7777666643210 00 12 12233334443444333333223322221111
Q ss_pred ccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHH
Q 013707 213 EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG 292 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 292 (438)
.+.+..+..|- ++...+-|.+..........-.++.+.....+.-+.| .|.+..+.+++.....
T Consensus 247 --------------~~~~i~~~yk~-l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 247 --------------LELGIHESYKL-LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLV 310 (510)
T ss_pred --------------hhcCHHHHHHH-HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehh
Confidence 11111112222 2223345566666667777778888888888888888 5999999777654433
Q ss_pred HHHHHHHHHHHHHHHH-hh-----chhhHHHHHHHHHHHHHHHhHhccc-------chH-HHH--H---HHHHhhhhhhH
Q 013707 293 LAGTISQLLFMPLLAP-IL-----GEAKLLSLGLFAACINMFICSISWS-------AWV-PYA--T---TAFSVLVVFAT 353 (438)
Q Consensus 293 ~~~~~~~~~~~~~l~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~--~---~~~~~~~~~~~ 353 (438)
-..++.. ...|+++. +. -|+....+. ...+...+....++ ... .++ . .+.+......+
T Consensus 311 plqI~l~-~~~gk~ta~~~pl~~~lka~~~R~~--~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~f 387 (510)
T KOG3574|consen 311 PLQIALP-LYIGKWTAGPRPLNVFLKAVPYRLG--GGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMF 387 (510)
T ss_pred hHHHhhh-hhheeecCCCCcchHHHHhhhHHHH--HHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHH
Confidence 4444444 23333322 11 111111111 12222222222221 111 111 1 23344445556
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
....+..++..||...|+.+.+.|+..++|+-.=..+...+.|...
T Consensus 388 v~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 388 VSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 6677778999999999999999999999999998889999988753
No 238
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.74 E-value=5.4e-06 Score=71.21 Aligned_cols=149 Identities=16% Similarity=0.135 Sum_probs=104.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccc----hhHHHHHHHHHhhhhc
Q 013707 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI----SFFYAYYALRTLTAMV 120 (438)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~ 120 (438)
.++.+..+...+.+...+|..+ +++.|.+.|++|.+.++.++.+...++......+-+. ..+|.+.+..++.|.
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~- 108 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN- 108 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc-
Confidence 5566667778888888899876 5889999999999999999999999988777654211 126788888888888
Q ss_pred chhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH-hh--HHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 013707 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-LS--TTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (438)
Q Consensus 121 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-~~--w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 196 (438)
+.+....+......+.+| ++||.+.|+.-...+++..+-..+... ++ -..-+...+....+..+...+++++.++
T Consensus 109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPP 186 (250)
T ss_pred cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCC
Confidence 767776677777778887 689999999999998887665444433 32 1222333333333333444455555543
No 239
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.73 E-value=7e-06 Score=81.04 Aligned_cols=140 Identities=17% Similarity=0.141 Sum_probs=101.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccc-cCcchHhHHHHHHHHHHHHHHHhcccc-----hhHHHHHHHHHhhhhc
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFYAYYALRTLTAMV 120 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~ 120 (438)
+.+......+...+....-+...+.|.++|+ +||++.+.++.++..++..+.+++... ......+++-.+..+
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~- 97 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL- 97 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh-
Confidence 3333444555666666667778889999997 599999999999999998887775321 112335556666666
Q ss_pred chhhHhhhhhHhhhccCCccc---hhHHHHHHHHHHHhhhhhhHhhhHHh-----------hHHHHHHHHHHHHHHHHHH
Q 013707 121 CEGSINCLALAYVADNISERQ---RASAFGILLGVLSASFVCGTLAARFL-----------STTSAFQAATIVSMLAAAY 186 (438)
Q Consensus 121 ~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~l~~~~-----------~w~~~f~~~~~~~~i~~~~ 186 (438)
|.|..-|...+...|.+++++ |-+.+.+...+.++|..+++.+..++ +|...|.+.++..++..+.
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 788899999999999998643 56677788888899988887776553 3888888888776665544
Q ss_pred H
Q 013707 187 M 187 (438)
Q Consensus 187 ~ 187 (438)
.
T Consensus 178 f 178 (654)
T TIGR00926 178 F 178 (654)
T ss_pred H
Confidence 3
No 240
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=3.5e-07 Score=77.60 Aligned_cols=146 Identities=17% Similarity=0.210 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
.++.+....+..+....-....-|.+.+ +.+++|+...+-+.+.......+.+|+.|.++||+||+...+.+.
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~~fF~-------~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a 337 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGPMFFQ-------KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASA 337 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHHHHH-------HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHH
Confidence 4566666665555554433333344443 466777777888888888888999999999999999999888765
Q ss_pred HHH-HHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 89 TLS-IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 89 ~~~-~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.+. .++.....++. +.=++...+.|+ +....-......++...|+++.|.+.|..+...++|..+-|++++.+
T Consensus 338 ~~~tl~~H~~l~Ft~-----lsPy~~m~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTF-----LSPYTSMTFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHHHhhhHHhhh-----ccHHHHHHHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 544 44444444432 222456677888 66666555777889999999999999999999999999999999874
No 241
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=1.6e-06 Score=84.49 Aligned_cols=111 Identities=15% Similarity=0.050 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHh
Q 013707 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVS 361 (438)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 361 (438)
+.+++.+...++..++. +..|+++|++|||+.+..+.+...++.++..++.+.+.+.. -++.|++.+........+.+
T Consensus 90 ~~s~~~s~~~lga~~g~-l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGS-LLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 44899999999999999 88899999999999999999999999999999998888777 58999999999999999999
Q ss_pred hcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 362 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 362 ~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
|..|++.||...+..+....+|..++ .+.+...
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 99999999999999998888777777 3444443
No 242
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.69 E-value=2.7e-05 Score=72.02 Aligned_cols=373 Identities=11% Similarity=0.037 Sum_probs=188.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccc-----ccCcchHhHH
Q 013707 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRKAMLTL 86 (438)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grk~~l~~ 86 (438)
.+.+..++.+...++....+|.++++. .-+.+..+.|.. |....++. .-++|.++.| |+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~------~~~~sy~q~~~f-Sla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSM------AKKVSYSQQAIF-SLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccc------cCCCChhHheee-eeeechhH-HHHhhhhhhhhhcccccCCcchhhh
Confidence 455566777777788777788887741 123333333321 11112221 2345666666 7899998876
Q ss_pred HH-HHHHHHHHHHHhcc----------c---------chhH--HHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhH
Q 013707 87 PL-TLSIIPLAILAYRR----------S---------ISFF--YAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS 144 (438)
Q Consensus 87 ~~-~~~~~~~~~~~~~~----------~---------~~~~--~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~ 144 (438)
-. .+.++..+..+... + .+.. ..+...-++.=+ -.+....+...+.-...++++++.
T Consensus 76 P~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~f-l~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 76 PIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVF-LCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred HHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHH-HHccCCceeehhhhhhcChhhcch
Confidence 43 33333333333221 0 0001 111122212222 234555566667666777788777
Q ss_pred HHHHHHHHHHhhhhhhHhhhHHh-------hH-------------HHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 013707 145 AFGILLGVLSASFVCGTLAARFL-------ST-------------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT 204 (438)
Q Consensus 145 ~~~~~~~~~~~g~~~g~~l~~~~-------~w-------------~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 204 (438)
+..-...+.++|..++-.+--.+ .| ..-..+.+...++..++..++-+|.+..+... +.
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~-~~ 233 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP-KI 233 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc-cc
Confidence 76666666666655543221111 00 11112233333344444445556654332211 11
Q ss_pred cccchhccccccCCCCCCCCCc-ccccc----CCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCC
Q 013707 205 RPIITEETEGVNQNESNSPVKI-PVCKK----IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (438)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (438)
+...+. +++..+...+..+++ ...++ .+..+..++.+ |-|.+..+.+.....-.++.........-+.| .|+
T Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~il-kLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~ 310 (544)
T PF13000_consen 234 EPINKS-DGKSKEISIEYDESDVISTEEILSIKDVYKSLWKIL-KLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGL 310 (544)
T ss_pred cccccc-cccccccceecccccccchhhhhhHHHHHHHHHHHH-cCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCC
Confidence 110000 000000000000000 00111 12333333333 46677778888888888888888888888888 599
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch---------------------------hhHHHHHHHHHHH----HHH
Q 013707 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------------------------AKLLSLGLFAACI----NMF 328 (438)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------~~~~~~~~~~~~~----~~~ 328 (438)
+.++.+.+..+..-..++.. ...++.+.--.+ -+....++..-.+ +..
T Consensus 311 ~KE~LAl~~li~~P~qii~~-~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~ 389 (544)
T PF13000_consen 311 SKEDLALLVLIDFPFQIILP-YYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQL 389 (544)
T ss_pred CHHHhHHHHHHhhhHHHHHH-HHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHh
Confidence 99998776655544455544 333333321110 0111222221111 111
Q ss_pred HhHhcc-c----chHHHHH----HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 329 ICSISW-S----AWVPYAT----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 329 ~~~~~~-~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.....+ + .+...+. .+..+.....+....++-+++.+|..-|+.+.+.|++.++|+..-..+.=++.|.+
T Consensus 390 iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 390 IVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred eEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 111122 1 1111111 33345556667778888899999999999999999999999999888888888875
No 243
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.5e-07 Score=77.73 Aligned_cols=291 Identities=11% Similarity=0.043 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhh
Q 013707 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLAL 130 (438)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 130 (438)
.++|.+.-+.+-...+.+.+.|.++|+-|||+.-+.-.+-+.++++ .-.++. +..++++|.+.|+ +.+....+..
T Consensus 72 G~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpq---YkVLmVGR~LGGi-aTsLLFSaFE 146 (454)
T KOG4332|consen 72 GDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQ---YKVLMVGRVLGGI-ATSLLFSAFE 146 (454)
T ss_pred CccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCc---eEEEeehhhhhhH-HHHHHHHHHH
Confidence 3445555555666677888899999999999975544444433332 233455 8899999999999 8787777766
Q ss_pred Hh-hhccCCccchhHHHHHHHHHH----HhhhhhhHhhhHH--------h--hHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 013707 131 AY-VADNISERQRASAFGILLGVL----SASFVCGTLAARF--------L--STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 131 ~~-i~~~~~~~~r~~~~~~~~~~~----~~g~~~g~~l~~~--------~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
++ +.|..+ +|+.-.-+..... -+|.-+-.+++|. + |.-.+|-..+.+..+...++..--.|.-
T Consensus 147 sWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENy 224 (454)
T KOG4332|consen 147 SWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENY 224 (454)
T ss_pred HHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhcc
Confidence 65 566653 3333222222211 1222222222222 1 3345666555443343333332223332
Q ss_pred CCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHH-HHHHHHHHHhhhchhhHHHHHHHH
Q 013707 196 PNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLK 274 (438)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 274 (438)
.+..+++ ......+...+.+..++++.. ..+-..+-...+..+.-|-|..-.
T Consensus 225 gdps~~k---------------------------dlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLsp 277 (454)
T KOG4332|consen 225 GDPSENK---------------------------DLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 277 (454)
T ss_pred CChhhhH---------------------------HHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCC
Confidence 2211110 000122222223333333332 222222222222222233332211
Q ss_pred hHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHhHhcc----c---c-hHHHHHHH
Q 013707 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE--AKLLSLGLFAACINMFICSISW----S---A-WVPYATTA 344 (438)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~---~-~~~~~~~~ 344 (438)
+..+.+ -|.+++...+..++++.+.. ++..|-.. ...+.+.+....+.+.+..... + + ..++..++
T Consensus 278 n~e~iP---hGfiFatFMlASmLGSSla~-Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~ 353 (454)
T KOG4332|consen 278 NDEEIP---HGFIFATFMLASMLGSSLAS-RLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCL 353 (454)
T ss_pred CcccCC---chhHHHHHHHHHHHhhHHHH-HHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHH
Confidence 111221 27888888888888884443 44443322 3344555555544444433321 1 1 12233456
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhH
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 379 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 379 (438)
+-.+.+..+|...-+-.+..|++.|++.+-.+..-
T Consensus 354 ~E~cvGlfwPSimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 354 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred HHHHHhhcchHHHHHHHhhCCHHHHhhhhhheech
Confidence 66788899999999999999999998877655443
No 244
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.67 E-value=1.1e-05 Score=71.98 Aligned_cols=149 Identities=14% Similarity=-0.025 Sum_probs=103.4
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHH
Q 013707 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATP 354 (438)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 354 (438)
.+|+++.+++.++........+.+ .+.|.++||+|||+..+..+++..++++.- ..++...+++ -++-|++....+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHHHHHH
Confidence 489999999999998888888888 788899999999999999999998888654 3455666665 4777888888887
Q ss_pred HHHHHH-h----hcCCCCcchhHHHHHh-hHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 013707 355 SFRSIV-S----KQVGPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 355 ~~~~~~-~----~~~~~~~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (438)
..-++. . +-+|+|..+..++... ..+.+-.+.+..++..+.+..+. .+..+|..+..+.+++.++...
T Consensus 141 ~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~------g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF------GPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC------CCcchHHHHHHHHHHHHHHHHh
Confidence 777764 2 2345555566666555 23344455555555555554321 2345677777777776666654
Q ss_pred hhhh
Q 013707 429 LSFY 432 (438)
Q Consensus 429 ~~~~ 432 (438)
.+++
T Consensus 215 ~W~E 218 (354)
T PF05631_consen 215 TWPE 218 (354)
T ss_pred cccc
Confidence 4443
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.65 E-value=2e-07 Score=89.38 Aligned_cols=120 Identities=11% Similarity=0.041 Sum_probs=101.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc----------ccchhHHHHHHH
Q 013707 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR----------RSISFFYAYYAL 113 (438)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~ 113 (438)
...+.++.+.|++.....++.+++....+++.+|++.|+.+.++.++.+++....... ++ .+.+...
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~---~~~~~~~ 357 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD---EVFVLGD 357 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCC---eeeeeeh
Confidence 3678888999999999999999999999999999999999999999988877554321 22 3455566
Q ss_pred HHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 114 RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 114 r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.++.++ +.+........++.+..|+++++...++.+...++|..+++.+++.+
T Consensus 358 ~~l~~~-~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 358 SIIAEV-LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred hHHHHH-HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888 77777788899999999999999999999999999999999888764
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=2.5e-07 Score=85.48 Aligned_cols=161 Identities=17% Similarity=0.205 Sum_probs=128.4
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH
Q 013707 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (438)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~ 93 (438)
++...+...+.+.+...+=..++| .+......|........+-++.-++.+++..|+|+-+++..++.+..+
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled--------~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~ 448 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLED--------LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVG 448 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh--------cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHH
Confidence 333444455555555555455443 334445667777777888888888999999999999999999999999
Q ss_pred HHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHH-HHhhhhhhHhhhHH----hh
Q 013707 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAARF----LS 168 (438)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~l~~~----~~ 168 (438)
=.+..+..+| .|..+-..+++|+ ..+..+.+.-+|+++..||+-|..+.++++.. .++|--+|.++|+. ++
T Consensus 449 Rf~~~S~L~n---~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg 524 (618)
T KOG3762|consen 449 RFLYYSYLQN---PWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG 524 (618)
T ss_pred HHHHHHHhcC---chheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh
Confidence 9999999999 9999999999999 89999999999999999999999999998865 47777777777776 47
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013707 169 TTSAFQAATIVSMLAAAY 186 (438)
Q Consensus 169 w~~~f~~~~~~~~i~~~~ 186 (438)
-|..|.+.++.+++.+++
T Consensus 525 ~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 525 ARTTFRIFGIACLVTLAL 542 (618)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 788888887776555433
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.64 E-value=2e-07 Score=82.11 Aligned_cols=129 Identities=18% Similarity=0.196 Sum_probs=95.4
Q ss_pred HHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHhhhhcchhhHhhhhhHhhhccCCc
Q 013707 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFF-YAYYALRTLTAMVCEGSINCLALAYVADNISE 139 (438)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~ 139 (438)
.+.-.-+.++.+++.||+|||+.+..+.+++.+..++...+.+.+.+ .+++.+|++... + +.+.+.|..|++|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~-fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----A-FQVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----h-heEEEEecCcccch
Confidence 44556677899999999999999999999999988877766542212 355666665332 2 35789999999999
Q ss_pred cchhHHHHHHHHHHHhhhhhhHhhhHHh--hHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013707 140 RQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDD 194 (438)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~l~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~~~ 194 (438)
.-|+...|..+.+..+|.++.|.++-.. +-..+..+.+...+++.+...++--|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999998433 334555666666566655544433343
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.63 E-value=9.8e-07 Score=83.77 Aligned_cols=150 Identities=17% Similarity=0.064 Sum_probs=116.1
Q ss_pred hHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhH
Q 013707 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 353 (438)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 353 (438)
+..++...+.+.+.++..++.+++. +..+.+.||++..+.+....++..+..++.....+.+.+.+ -++.|+..+..+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~-~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQ-FPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHH-hhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 4567888889999999999999999 78889999999666665555555544444444667776666 689999999999
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
|....++..-+.+++||..+|+.....++|+++|+.+...+.+. +...........|++-+++.++..++.+
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~--~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKL--NGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhh--cCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 99999999999999999999999999999999999999887774 2222223344556666666665554443
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.62 E-value=3.7e-07 Score=89.25 Aligned_cols=121 Identities=14% Similarity=0.048 Sum_probs=108.6
Q ss_pred hHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhH
Q 013707 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 353 (438)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 353 (438)
+..+.+.....+..+...++..++. ++.|.++||+|||+++..+.++..++-+..+++++.+...+ -++.|++.+...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~-~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGS-LIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHH-hhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 3356677777788888888888988 88899999999999999999999999999999999988877 588999999999
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.....+..|.+++++|+.+..+ ......++.+++...+++...
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 232 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD 232 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 888888999999999988874
No 250
>PRK11462 putative transporter; Provisional
Probab=98.60 E-value=1.3e-06 Score=83.77 Aligned_cols=146 Identities=16% Similarity=0.181 Sum_probs=111.4
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-hhHHHHHHHHHHHHH
Q 013707 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGE-AKLLSLGLFAACINM 327 (438)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~~~~~~~~~~ 327 (438)
+..+..+........++..|+.+..|.++..+|.++.+.-+...+.- ++.|.++|| +|| |+.+..+.+..++++
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~D-p~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~ 94 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISD-PCMGLLADRTRSRWGKFRPWVLFGALPFGIVC 94 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHh-hhheehhccCCCCCCCcchhHhHHHHHHHHHH
Confidence 33444455666677889999999999999999999999999999999 888999996 466 456667777777777
Q ss_pred HHhHhccc--c-h-HHHH---HHHHHhhhhhhHHHHHHHHhhcCC-CCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 328 FICSISWS--A-W-VPYA---TTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 328 ~~~~~~~~--~-~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
.++...++ . . ..+. ..++..+......+..++..|..+ +++|++..+.......+|..+++.+...+.+..+
T Consensus 95 ~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 95 VLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66654442 1 1 2222 345567777777888888888776 6789999999999999999999888887777654
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.58 E-value=0.00076 Score=64.23 Aligned_cols=237 Identities=11% Similarity=0.098 Sum_probs=141.4
Q ss_pred HHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc--c-------cch-------------------hHHHHHHHH
Q 013707 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--R-------SIS-------------------FFYAYYALR 114 (438)
Q Consensus 63 ~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~--~-------~~~-------------------~~~~l~~~r 114 (438)
...+......+++|+++|.+++-+....+.....+.++. | +.. ..|...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 334556779999999999998887776665555555442 1 100 012222333
Q ss_pred HhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHhh-------------HHHHHH-HHHHHH
Q 013707 115 TLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS-------------TTSAFQ-AATIVS 180 (438)
Q Consensus 115 ~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~-------------w~~~f~-~~~~~~ 180 (438)
+..-+.|.-...-.-..+..|.++.+|-.|..++...+.++|.++++.+..+++ |...+. +.++..
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~ 230 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVL 230 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHH
Confidence 333331211222245788999999999999999999999999999887765542 322221 111111
Q ss_pred --HHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHH
Q 013707 181 --MLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFS 258 (438)
Q Consensus 181 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (438)
.+........+.+...++++. .+...++++++.+.+.++.++.+.++|.+..+.+....+
T Consensus 231 ~~g~~i~~~~~~~~~~vl~~~~~------------------~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Y 292 (491)
T PF03219_consen 231 ILGIVIILLYRYMNKNVLTDPRF------------------YPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAY 292 (491)
T ss_pred HHHHHHHHHHHHHHHHccCcccc------------------chhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 111122222333222111110 001111222334457788888999999999999888888
Q ss_pred HhhhchhhHHHHHHHHhHcCCChhH---HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q 013707 259 GLSEGGMQASFLYFLKAQFHFNKNQ---FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (438)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (438)
+.....+....-..+++.+.-+.+. .|......++..++.. ++++.+.+|+|-+....+
T Consensus 293 gi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 293 GISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHH
Confidence 8888888777777777765433222 2555566677777766 777888899887665443
No 252
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.54 E-value=7e-07 Score=82.97 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHH
Q 013707 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (438)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (438)
+|.+..+++..++...+.++....+..|.+.. .+.+....++.......+.+++.+++.++++|+|+|+++.+
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-------lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-------LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-------cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 55666667777777777777777777776543 23334555667777788888889999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccc-------hhHHHHHHHHHHHhhhhh
Q 013707 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ-------RASAFGILLGVLSASFVC 159 (438)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~-------r~~~~~~~~~~~~~g~~~ 159 (438)
+.++..++.++..+.+. +..+..++..++.++ +.+...+...++++|..+-+| -|...+......=+|..+
T Consensus 308 ~~~~~~i~~~~~~f~~~-~~~~l~~~~~~i~~~-g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 308 GLLLLAVGYLLLYFTPA-GSVVLIVVALIIAGV-GTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHHHHHHHHHHHHhhcC-cchHHHHHHHHHHHH-HhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 99999999999998872 227888888899999 889999999999999887432 345556666555666666
Q ss_pred hHhhhHH
Q 013707 160 GTLAARF 166 (438)
Q Consensus 160 g~~l~~~ 166 (438)
+..+.++
T Consensus 386 a~~~~g~ 392 (467)
T COG2211 386 AGFIPGW 392 (467)
T ss_pred HHHHHHH
Confidence 6554443
No 253
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.51 E-value=4.6e-06 Score=73.78 Aligned_cols=166 Identities=17% Similarity=0.151 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-CcchHhHHHHH
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLT 89 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~~ 89 (438)
+.+.+-.-+..+..+....-+|.+.. |.+.|..+.|.+.+...+.+...++....+++|. ++|+..+...+
T Consensus 211 W~vtLfmGlqS~~~Y~~~~WLP~ili--------~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 211 WQVTLFMGLQSLLYYIVIGWLPAILI--------DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHH--------HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 33344344555666777778888877 4577788899999999999999999999999965 57777778888
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccc-hhHHHHHHHHHHHhhhhhhHhhhHHh-
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ-RASAFGILLGVLSASFVCGTLAARFL- 167 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (438)
.+.++...+.+.|....++ .-++.|+ +.|..+|.....+.+-.++.+ -++-.+..|....+=...||.+.|++
T Consensus 283 ~~l~G~~G~~~~P~~~~~l----w~~llG~-G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 283 LMLVGLVGLLLAPGQLPIL----WALLLGL-GQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred HHHHHHHHHHHhhhhHHHH----HHHHHhC-ccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 8888888888887733222 2488999 888889999999998887544 34444555544444456689988886
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHH
Q 013707 168 ----STTSAFQAATIVSMLAAAYMRV 189 (438)
Q Consensus 168 ----~w~~~f~~~~~~~~i~~~~~~~ 189 (438)
+|+.+........++..+..+.
T Consensus 358 Da~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 358 DATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 7888888777666555544443
No 254
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.47 E-value=1.2e-05 Score=69.20 Aligned_cols=125 Identities=12% Similarity=0.184 Sum_probs=89.9
Q ss_pred HHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc-------cchHHH
Q 013707 268 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-------SAWVPY 340 (438)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 340 (438)
....-+++.+|+|.+|...+-....++..+ + +..|.+.|+.|++.++.+|.....+++..+...- +.|...
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-G-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-c-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 345557778999999999888888888776 4 6779999999999999999999999998887642 122222
Q ss_pred H-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
+ ..+.+.+.............+.+| ++||++.|+.-....+++++-..+...++
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 2 223333333344454555567888 68999999999998877666555544443
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.43 E-value=1.4e-05 Score=72.39 Aligned_cols=167 Identities=19% Similarity=0.172 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhccccc-ccCcchHhHHHHH
Q 013707 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-QYGRKAMLTLPLT 89 (438)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grk~~l~~~~~ 89 (438)
..++...++..++.++.-+++.+|. .+-++.+..+..-+.+....+.+++-...|++.. |.++|+.-.+++.
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPyg-------g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~ 283 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYG-------GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCL 283 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCch-------hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 3445556677777777777777774 4466777888888899999999999999998877 6788888888888
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh--
Q 013707 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (438)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-- 167 (438)
..+++..+..++....+.+.+...-++.|+ +.|.+.....+..-|..++++.|..+|.+.+.+.++..+|..+++..
T Consensus 284 ~~~~~f~lii~a~~~~~~~~~~~~~~l~G~-g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 284 LGALAFALIILAGPLGSPWLFRPGVFLLGL-GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766655333337889999999999 89999999999999999999999999999999988888887777652
Q ss_pred ------------hHHHHHHHHHHHHHHHHH
Q 013707 168 ------------STTSAFQAATIVSMLAAA 185 (438)
Q Consensus 168 ------------~w~~~f~~~~~~~~i~~~ 185 (438)
++..+|.+.++..+++..
T Consensus 363 ~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 363 LVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 456677777666544433
No 256
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.38 E-value=1.9e-05 Score=77.97 Aligned_cols=166 Identities=11% Similarity=0.041 Sum_probs=117.5
Q ss_pred hhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHhHhcccc---
Q 013707 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFICSISWSA--- 336 (438)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 336 (438)
+++++...+..|+.+.+|++...+..++.......-+.. +++++++|+ +|+++.+.++.++..++..++.+....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 466778888899888899999888777776666666655 778899995 699999999999999998887764311
Q ss_pred -----hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc---chhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCC
Q 013707 337 -----WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNF 407 (438)
Q Consensus 337 -----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 407 (438)
...+. +.+...|.+.+-|...+...|.+++++ +-+.+.++....++|+.+++.+.+++-+..+..+. +..
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~-~~~ 159 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC-QDC 159 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-Ccc
Confidence 11222 566778888888999999988887543 56788888888999999999999888654321110 011
Q ss_pred CchHHHHHHHHHHHHHHHHHh
Q 013707 408 PGFSIMCIGLASVRAFTYELL 428 (438)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~ 428 (438)
....+.+.+++++++++....
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 233455555555555555443
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.32 E-value=2.4e-06 Score=58.72 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=57.8
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHH
Q 013707 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (438)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (438)
...++...+.+...|.+|.+.+ +.+.+..++|.+.++..+...++++++|.++||++|++..+.....
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~--------~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK--------QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh--------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4455666778889999999976 5688889999999999999999999999999999998887765543
No 258
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.27 E-value=4.2e-06 Score=57.94 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=67.8
Q ss_pred HhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHh
Q 013707 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (438)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~ 100 (438)
.++...+.|.+|.+.+ |.+++..+.|++.+.+.+|++++++...++.++..+++.+..+.+...+..+.+++
T Consensus 5 GigRFayTplLP~M~~--------~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQA--------DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhHHHHHHhHhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788899999976 55777889999999999999999999999999988899999999999999999999
Q ss_pred ccc
Q 013707 101 RRS 103 (438)
Q Consensus 101 ~~~ 103 (438)
.++
T Consensus 77 ~~~ 79 (85)
T PF06779_consen 77 THS 79 (85)
T ss_pred Hhc
Confidence 988
No 259
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.27 E-value=2.2e-05 Score=62.20 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccC
Q 013707 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (438)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 137 (438)
++......+++++.+.+.++.|.|+.++++.+.+.+-.... +-++ .+.++.+-.+.|+ +.+..+++...++.+..
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~---~~~l~~~s~l~G~-~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN---SYTLYPASALLGF-GAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh---HHHHHHHHHHHhh-hhHHhhHhhhHHHHHcC
Confidence 34455556667777888999999999999999887555443 4556 6889999999999 99999999999999999
Q ss_pred CccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 138 SERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
++++|++..++.......+.++|.++.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888887654
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.20 E-value=6.5e-05 Score=70.30 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=109.1
Q ss_pred chhHHHHHHHHHHHhhhchhhHHHHHHHHh-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch-hhHHHHHHHHH
Q 013707 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAA 323 (438)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 323 (438)
|.++...+..++............-+|+++ ..+-+.+..|++.+...++..+.+ +..++...|.+. |+-++.+.+++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~-liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFS-LIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcc-hhhcccccccCCcccCHHHHHHHH
Confidence 446667777777777777776666677765 246677778999999999999999 777888888775 77888999999
Q ss_pred HHHHHHh-Hhc--ccc--hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 324 CINMFIC-SIS--WSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 324 ~~~~~~~-~~~--~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
.++.++. .+. ++. +.+.. -++.|++.+. .....+++++..-.++|.++++..+..+.+|.++||.+...+..
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 9998887 332 221 22222 2455555444 45677888887778999999999988888999999877655443
No 261
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.19 E-value=4.8e-05 Score=69.46 Aligned_cols=148 Identities=14% Similarity=-0.008 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHhhhch---hhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 248 LSQAAVVAFFSGLSEGG---MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 248 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
.|..++...+..+.... .+.-...|..+.|| +...+-++..++.+..+... +.+-|+.||+|-|....++....+
T Consensus 43 RW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g-f~~mw~ldk~GLR~a~llgt~ln~ 120 (480)
T KOG2563|consen 43 RWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFG-FAAMWILDKFGLRTALLLGTVLNG 120 (480)
T ss_pred HhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHh-hHHHHhhcccchHHHHHHHHHHHH
Confidence 34444444444443322 23334556677778 66667788888888888888 777799999999999999999999
Q ss_pred HHHHHhHhcccc---hHHH--HH----HHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 325 INMFICSISWSA---WVPY--AT----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 325 ~~~~~~~~~~~~---~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
++..+=..+..+ ..+. +. .+.+...........-....-+|+++|..+..+..+.+.+|.++|..+-..+.
T Consensus 121 iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 121 IGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred HHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceec
Confidence 988775554322 1112 11 22222222222222233445689999999999999999999999988888877
Q ss_pred HH
Q 013707 396 AL 397 (438)
Q Consensus 396 ~~ 397 (438)
.+
T Consensus 201 ~~ 202 (480)
T KOG2563|consen 201 PS 202 (480)
T ss_pred CC
Confidence 75
No 262
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.18 E-value=1.7e-05 Score=72.35 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=94.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhccc---c--hHHHH---HHHHHhhhh
Q 013707 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS---A--WVPYA---TTAFSVLVV 350 (438)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~---~~~~~~~~~ 350 (438)
+++...+.+..+..++.++++ ++.|++.||+|||++.-..++++.++.+..+.... . .+..+ -.++|++.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQ-l~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQ-LFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 556666888899999999999 88899999999999999888888888876665331 1 11111 378899999
Q ss_pred hhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 351 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
.-+|...+..+|...++.||+-.+..-+.+..|...|..+.-.+...
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~ 206 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAI 206 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHH
Confidence 99999999999999999999999998888888877777665554443
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.16 E-value=2.7e-05 Score=53.54 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013707 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (438)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (438)
.-...++...+......++|.|+++ .|+|+.++|.+.++..+...++. ++.|.++||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 3455667777888889999999998 69999999999999999999998 8889999999998877665543
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.02 E-value=0.001 Score=62.78 Aligned_cols=50 Identities=12% Similarity=0.096 Sum_probs=41.3
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHh
Q 013707 341 ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (438)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 390 (438)
.++++|+..|........+..+.+++++|..+-.+....-.+|-.+|..+
T Consensus 378 ~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 378 LMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37888999999999999999999999999888887777777777777654
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.96 E-value=3.2e-05 Score=66.63 Aligned_cols=320 Identities=15% Similarity=0.055 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhh
Q 013707 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV 133 (438)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i 133 (438)
|.+.-+--+..++..+......||+---.=..+..++.+.+..+.+++++ .++-+.+-.+..+ ++|.-...-.++-
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSi-ssGlGEiTFL~ls 140 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASI-SSGLGEITFLALS 140 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhh-cCCcceeehhhhh
Confidence 55556667777888888888899875433334556677888888999998 7777777777776 6555543333333
Q ss_pred hccCCccchhHHHHHHHHHHHhhhhhhHhhhHH------hhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-CCCcc
Q 013707 134 ADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRP 206 (438)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~------~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~ 206 (438)
+ .+++ ...+.++.+.+.+.++|..--.. ++-|...++...+..+.+...++.+++++...... ++..+
T Consensus 141 s-~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~ 215 (409)
T KOG3880|consen 141 S-RYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE 215 (409)
T ss_pred c-cCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce
Confidence 3 2222 22333444444444444322111 24466666666665555455555555544332111 00111
Q ss_pred cchhccccccCCCCCCCCCccccccCCchhHHHHhhcccchhHHHHHHHHHHHhhhchhhHH-HHHHHHh-HcCCChh--
Q 013707 207 IITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYFLKA-QFHFNKN-- 282 (438)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~g~~~~-- 282 (438)
...+...+ .+..+++...+.....++-++.+ +| +...++-.+...+..+..+.- .+..+-+ ..|.+..
T Consensus 216 ~~~~~~~~-----~~a~e~~sv~s~~~~~~e~~~~i--~p-ll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~ 287 (409)
T KOG3880|consen 216 IIPSQYLP-----FEAAEEKSVPSRRLGLKETLKRI--KP-LLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKD 287 (409)
T ss_pred eccCCCCc-----ccccccccCchhhhcHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchh
Confidence 11111000 00000110111112223322222 12 222222222333333333222 1211110 1133222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhch---hhHHHHHHH---HHHHHHHHhHhcccchHHHHH-HHHHhhhhhhHH
Q 013707 283 -QFADLMLIAGLAGTISQLLFMPLLAPILGE---AKLLSLGLF---AACINMFICSISWSAWVPYAT-TAFSVLVVFATP 354 (438)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 354 (438)
|.-+....+.++..+.+ =+-|+=+ .+.+.+-.. +..+.-...++.++.|...+. +.=|+..|..+.
T Consensus 288 sqYRwyqvlYQlGVFiSR------SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISR------SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hcchhhheeeeeeEEEEe------ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 23344444444433322 1112211 122211111 112222334455666655553 444777777777
Q ss_pred HHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 355 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 355 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
..+--+.+-.++++|--+++........|..++..++-.+.+
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh~ 403 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLHN 403 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccchh
Confidence 777777777888999999998888888877777766544433
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.94 E-value=0.00038 Score=66.03 Aligned_cols=131 Identities=20% Similarity=0.292 Sum_probs=95.1
Q ss_pred hHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chhhHHHHHHHHHHHHHHHhHhccc----c
Q 013707 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKLLSLGLFAACINMFICSISWS----A 336 (438)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~ 336 (438)
..-..+|+++.+|.++.+...+.....+--.+ . ++.|.++|-+ +||..+.++.++..++...+...+. .
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-K-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-h-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 44456788888999999988888777776666 4 5678999976 3566777777777666665555433 2
Q ss_pred hHHH-HHHHHHhhhhhhHHHHHHHHhhcC--CCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHH
Q 013707 337 WVPY-ATTAFSVLVVFATPSFRSIVSKQV--GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 337 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 398 (438)
.... ..++..++.........+...|.. .++.+|...+.......+|+.++..+.|.+.+..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~ 151 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF 151 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 2222 245566777777777777777665 2233788999999999999999999999998863
No 267
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=3.6e-07 Score=87.70 Aligned_cols=111 Identities=13% Similarity=0.049 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc---cchHHHH-HHHHHhhhhhhHHHHH
Q 013707 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVPYA-TTAFSVLVVFATPSFR 357 (438)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~ 357 (438)
.+.+...+...++..++. ++.|.++||+|||+.+..+..+..++.++..+++ +.+.+.+ -++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~g~~~G~-~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGA-LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHhhhcccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456788888899999998 8889999999999999999999999999999988 7766666 5888999999999999
Q ss_pred HHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHH
Q 013707 358 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (438)
Q Consensus 358 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 393 (438)
.++.|..|+++||+..++.+....+|..++..+.-.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~ 160 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYI 160 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999888888887766533
No 268
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.00032 Score=66.39 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchh
Q 013707 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (438)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (438)
++...+.+ ...|.++||+|||..+........+..+...+.. |...+..-...+.........++++|....++|..
T Consensus 72 ~~~~~i~s-~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISS-PLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFLLLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHH-hhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhhhcccccchhhhhhhhhhheeeccchhHHHH
Confidence 56666666 7778999999999998888887777776666554 32222222233455667788899999999999999
Q ss_pred HHHHHhhHhhhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 013707 372 AQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLS 430 (438)
Q Consensus 372 ~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (438)
..|+.+.....+..++|.+.+.+.... .....+.+..+..++.....+...
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~--------~~a~~f~ia~~~~~~~~~y~~~~l 199 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFL--------GIALVFLIAAASGILSLLYMLLFL 199 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhc--------CchHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999998872 334455666666666666555443
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.90 E-value=0.00088 Score=53.11 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc
Q 013707 290 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE 368 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (438)
+......+.. ++.+.+.+++|.|+.+.++.+...+-..... -++.+..+. ..+.|++.+..+...-.++.+..+++.
T Consensus 45 i~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 45 ILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 3344444555 6778889999999999999988886655543 334455555 789999999999999999999999999
Q ss_pred chhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 369 QGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 369 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
+++..++.-.+.+.+..+|..+.-.+.+
T Consensus 123 ~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 123 IGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888888876655543
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.84 E-value=0.027 Score=52.65 Aligned_cols=329 Identities=12% Similarity=0.075 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHH-HHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhc---------cc-----------c-h---
Q 013707 51 YLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR---------RS-----------I-S--- 105 (438)
Q Consensus 51 ~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~---------~~-----------~-~--- 105 (438)
....++-+..-+ ...+..++.+.+.++..|.+++-.-+..+....+++++. ++ + +
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 445666666666 567788899999999999999988887777777666653 11 0 0
Q ss_pred h-----HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHhh------------
Q 013707 106 F-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS------------ 168 (438)
Q Consensus 106 ~-----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~------------ 168 (438)
. .|..-+.....=+.+.-...-.-.....|.++.+|-.|..+..+...+++..+++.+..+++
T Consensus 141 ~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~ 220 (509)
T COG3202 141 FILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKD 220 (509)
T ss_pred eeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHH
Confidence 0 02222222222221111122245677899999999999999999999999999887776652
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCcccchhccccccCCCCCCCCCccccccCCchhHHHHhhcccc
Q 013707 169 --TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (438)
Q Consensus 169 --w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (438)
-+..+.+.+..+.++... .+++.+...+.+.-. .+...+++.++.+....+.++.+.++|
T Consensus 221 ~~~~~~~~vi~~~~~i~~~l-~~~~~r~il~~~~f~-----------------~~~~~kk~~~k~k~~~~~s~k~i~~Sk 282 (509)
T COG3202 221 LLLQILFIVIVILGIIAILL-YRYINRNVLTDPLFY-----------------LRAKKKKKKKKLKLGLIESFKMILRSK 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchh-----------------HHHhcccccccccCcHHHHHHHHHhhh
Confidence 123344444443333322 222322111111100 000011122233446778888888999
Q ss_pred hhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 013707 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQF---ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
.++...+...+++.+...+....-.-.++.+..+.+.. |.+....++...+.....++.+.+|.|-....++.=+.+
T Consensus 283 yL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~ 362 (509)
T COG3202 283 YLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVM 362 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHH
Confidence 99988888888888877776665555555444333322 444555556545555567778888877655444333333
Q ss_pred HHH---HHHhHhcccc-----------hHHHHHHHHHhhhhh-hHHHHHHH-------HhhcCCCCcchhHHHHHhhH-h
Q 013707 324 CIN---MFICSISWSA-----------WVPYATTAFSVLVVF-ATPSFRSI-------VSKQVGPNEQGKAQGCISGI-S 380 (438)
Q Consensus 324 ~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~g~~~g~~~~~-~ 380 (438)
.++ ++...+..+. ..+++....|..... .-..=++. +.--.++|+|.+.=+....+ .
T Consensus 363 litg~lFF~~~~f~~~~~~~~~~~~~~~pl~L~v~iG~iqnvlsK~~KYslfD~tKEma~ipldpe~r~kgKAa~D~i~~ 442 (509)
T COG3202 363 LITGVLFFGFAFFNNSIGSIFGGILGSPPLVLAVYIGGIQNVLSKITKYSLFDATKEMAYIPLDPEYRTKGKAAVDVIGG 442 (509)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccCCchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHcCcCCHhHHhhccchhhhhhh
Confidence 222 2222222110 011111122221111 11111111 11124668887777777644 4
Q ss_pred hhhhhhhhHhHHHHHHH
Q 013707 381 SFANIVSPLIFSPLTAL 397 (438)
Q Consensus 381 ~~g~~~g~~~~g~l~~~ 397 (438)
.+|-.+|..+...+...
T Consensus 443 k~GKSiGSli~~~~~~i 459 (509)
T COG3202 443 KLGKSIGSLIQSLLFII 459 (509)
T ss_pred cccccHHHHHHHHHHhe
Confidence 77777777765555443
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.78 E-value=0.005 Score=56.34 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=68.1
Q ss_pred hchhhHHHHHHHHhHcCC---ChhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhH------
Q 013707 262 EGGMQASFLYFLKAQFHF---NKNQFADLMLI-AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS------ 331 (438)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 331 (438)
+.......|-+..+..+- +....-..... ..+...+|. ....++ +...+|.+.+...+-.+..-++.
T Consensus 259 y~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~-~~a~~~--~~~~~r~l~i~v~lR~lfiPlF~~cn~~~ 335 (406)
T KOG1479|consen 259 YFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGS-ILAALL--TWPDPRKLTIPVLLRLLFIPLFLLCNYPP 335 (406)
T ss_pred eeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhh-hhhhcc--cCCCCceehHHHHHHHHHHHHHHHhccCC
Confidence 333444556666554322 22222333334 566666665 444443 23333333333332222222222
Q ss_pred ----hcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 332 ----ISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 332 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
+.++.|......++++..|-.......+..+.+|++++-.+-.+....-..|-+.|. +.+++.
T Consensus 336 ~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l~ 402 (406)
T KOG1479|consen 336 LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWVF 402 (406)
T ss_pred CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHHH
Confidence 122334444478889999998899999999999888776555555555454444444 444443
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.56 E-value=0.0011 Score=61.85 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=78.5
Q ss_pred hHhHHHHHHHHHHHHHHHhcccch------hHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCcc---chhHHHHHHHHH
Q 013707 82 AMLTLPLTLSIIPLAILAYRRSIS------FFYAYYALRTLTAMVCEGSINCLALAYVADNISER---QRASAFGILLGV 152 (438)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~ 152 (438)
|.++++.++..+|.++..++.... ....++++-.+.++ |.|..-|...++.+|.++++ +|.+.+.++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~-G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAV-GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHH-HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHh-ccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 567788888888888855442211 13678888889999 89999999999999999865 466677888899
Q ss_pred HHhhhhhhHhhhHHh----hHHHHHHHHHHHHHHHHHH
Q 013707 153 LSASFVCGTLAARFL----STTSAFQAATIVSMLAAAY 186 (438)
Q Consensus 153 ~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~ 186 (438)
.++|..+++.+..++ +|...|.+.++..+++.+.
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 999999998777664 7999999988776655443
No 273
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.55 E-value=0.005 Score=55.24 Aligned_cols=136 Identities=16% Similarity=0.156 Sum_probs=98.1
Q ss_pred hhhchhhHHHHHHHHhHcCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhccc--
Q 013707 260 LSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-- 335 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (438)
..........+.+..+ .+.+. ...+.......+...++. +..|++.||.|||+.+..+......+.+...+..+
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 3444445556666655 34444 467888888888888887 88899999999987777777654555455555554
Q ss_pred chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCC-CcchhHHHHHhh-HhhhhhhhhhHhHHHHHHH
Q 013707 336 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISG-ISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~g~~~~g~l~~~ 397 (438)
.+.... ....+++.+...+...++..+..|+ ++|+...+.... ....+..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 3446788888889999999999987 678888888888 5788888888777777665
No 274
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.52 E-value=0.0092 Score=55.12 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=102.4
Q ss_pred HHhhhchhhHHHHHHHHhH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccc
Q 013707 258 SGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA 336 (438)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (438)
+.--+-....++..|+.+. .|++..+...-.-....=.-+...+....+.|.++.|++++.+.+...+...++.+.++.
T Consensus 15 f~~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv 94 (412)
T PF01770_consen 15 FFKEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSV 94 (412)
T ss_pred HHHhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcH
Confidence 3334556788899999886 799988875432222222222233556688999999999999999999888888888877
Q ss_pred hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 337 WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 337 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
+.+-+ -++.|...+. ....++++-..+|+++--++.+.......+|..++..++=.+++
T Consensus 95 ~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 95 LAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655 4666665554 67778888888899999999999999999888888877665555
No 275
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.40 E-value=0.0021 Score=44.67 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchH
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (438)
.+-+.+...+|...+| .++|..+.|++-+.+.++..++. +...++.++.++++.+..+.+...+..+.+++.++.+.
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 3444566677777776 69999999999999999999999 77778888888889999999999999999998877654
No 276
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.40 E-value=0.05 Score=53.25 Aligned_cols=129 Identities=19% Similarity=0.182 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhhhhccccccc-CcchHhHHHHHHHHHHHHHHHhcc----------------------cchhHHHHHH
Q 013707 56 QQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIPLAILAYRR----------------------SISFFYAYYA 112 (438)
Q Consensus 56 ~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~~~~~~~~~~~~~~~----------------------~~~~~~~l~~ 112 (438)
..+.+.-......+..+.++|-| ||-+.+.++.++..++..+..++. +......++.
T Consensus 78 ~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~ 157 (571)
T KOG1237|consen 78 NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYG 157 (571)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHH
Confidence 34444445555667888999975 999999988888877755443321 1012346777
Q ss_pred HHHhhhhcchhhHhhhhhHhhhccCC---ccc---hhHHHHHHHHHHHhhhhhhHhhhHH----hhHHHHHHHHHHHHHH
Q 013707 113 LRTLTAMVCEGSINCLALAYVADNIS---ERQ---RASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSML 182 (438)
Q Consensus 113 ~r~l~G~~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i 182 (438)
+.-+..+ |.|..-|...+.-+|.++ +++ +...+.++....+.|..++-.+-.+ .+|.+.|.+..+...+
T Consensus 158 ~l~lia~-G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~l 236 (571)
T KOG1237|consen 158 ALYLIAL-GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNAL 236 (571)
T ss_pred HHHHhee-ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHH
Confidence 7777777 888889999999999998 322 2356778888888888877655544 4898888887766555
Q ss_pred HHH
Q 013707 183 AAA 185 (438)
Q Consensus 183 ~~~ 185 (438)
+.+
T Consensus 237 ai~ 239 (571)
T KOG1237|consen 237 AIL 239 (571)
T ss_pred HHH
Confidence 433
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.33 E-value=0.027 Score=53.63 Aligned_cols=125 Identities=11% Similarity=0.002 Sum_probs=82.9
Q ss_pred HHhHcCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc----cc--------
Q 013707 273 LKAQFHF-----NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS----WS-------- 335 (438)
Q Consensus 273 ~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------- 335 (438)
++|.+.. +.+...++.+...+...+.-.++.+++++|++|+++...........+.++++. .+
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~ 108 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALA 108 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHH
Confidence 4555544 346677777766666666523677899999999998776655555554444432 00
Q ss_pred -------------------chHHHHH-HHHHhhhhhhHH-HHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHH
Q 013707 336 -------------------AWVPYAT-TAFSVLVVFATP-SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (438)
Q Consensus 336 -------------------~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 394 (438)
.|..-.. ....+......+ ..+++++|....++..|-+++.....++|..+++.+..++
T Consensus 109 ~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 109 DKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111222333333 7888999999999999999999999999999999988887
Q ss_pred HHH
Q 013707 395 TAL 397 (438)
Q Consensus 395 ~~~ 397 (438)
.+.
T Consensus 189 ~~~ 191 (472)
T TIGR00769 189 SKL 191 (472)
T ss_pred HHh
Confidence 753
No 278
>PRK03612 spermidine synthase; Provisional
Probab=97.23 E-value=0.052 Score=52.75 Aligned_cols=145 Identities=12% Similarity=0.098 Sum_probs=87.1
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH---HHHHHHHHHH
Q 013707 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS---LGLFAACINM 327 (438)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~ 327 (438)
..+..++.+++.........-.+...+|.+..+.+.+.+.+..+..+|+ .+.+++.++..++.... ++.+......
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ 97 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRDAAAGFVAVELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566666666667777777789999998998888888888888 66666653322222111 1111111111
Q ss_pred HH---hHhcccchH-HHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 328 FI---CSISWSAWV-PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 328 ~~---~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
++ ..+...... .+. .++.++..|+..|....+..+.. .++.|+..|-......+|+.+|+.+.+++.--
T Consensus 98 ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 98 ILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 11 111111111 111 34556777777777776665432 23456778888899999999999999888763
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.19 E-value=7.1e-05 Score=72.60 Aligned_cols=139 Identities=11% Similarity=0.101 Sum_probs=2.6
Q ss_pred hhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcc-----
Q 013707 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----- 334 (438)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 334 (438)
....++....-.-++++++++..+.|.+.+.+-++..+.. ++..++.+|-.|-+.+-.|.++++++.+++++.+
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~-~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVV-LFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 3333443333345667799999999999999999999988 5556888887888888999999999988877621
Q ss_pred -----------------------------------------c---c-hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCc
Q 013707 335 -----------------------------------------S---A-WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE 368 (438)
Q Consensus 335 -----------------------------------------~---~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (438)
+ . ..+++ .++.|++....++...+|+-|.+++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 0 0 01112 367788899999999999999999999
Q ss_pred chhHHHHHhhHhhhhhhhhhHhHHHHHHHHh
Q 013707 369 QGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (438)
Q Consensus 369 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 399 (438)
.+...|+......+|-++|-.+++...+.+.
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~yv 205 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIYV 205 (539)
T ss_dssp -------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhcee
Confidence 9999999999999999999888888876543
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.00051 Score=63.02 Aligned_cols=144 Identities=12% Similarity=0.086 Sum_probs=107.4
Q ss_pred hhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hchhh-HHHHHHH
Q 013707 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAK-LLSLGLF 321 (438)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~-~~~~~~~ 321 (438)
.+.......+...+.+..-..+.|+|+++ .|.+....+.+....-+.+.+.+ ++.|..+|| +|||| .+..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQ-P~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQ-PLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceec-ccccccccccccccccccchHHHhhH
Confidence 34445555666667777778899999988 69999999999888888999999 788899995 56655 5566667
Q ss_pred HHHHHHHHhHhcccc--------h-----HHHHH-----HHHHhhhhhhHHHHHHHHhhcCCCCcchh-HHHHHhhHhhh
Q 013707 322 AACINMFICSISWSA--------W-----VPYAT-----TAFSVLVVFATPSFRSIVSKQVGPNEQGK-AQGCISGISSF 382 (438)
Q Consensus 322 ~~~~~~~~~~~~~~~--------~-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~ 382 (438)
...++++++.++.+. . ..+.. -+.=+..........++..|...++++-+ +++.+.....+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 777788777774321 1 11112 23345666778888999999998888877 99999999999
Q ss_pred hhhhhhHhHH
Q 013707 383 ANIVSPLIFS 392 (438)
Q Consensus 383 g~~~g~~~~g 392 (438)
|+.+|-.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 9988876665
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.05 E-value=0.017 Score=54.34 Aligned_cols=109 Identities=17% Similarity=0.205 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccc---ccCcchHhHHHHHHHHHHHHHHHhcccc---------------hhHHHHHHHHH
Q 013707 54 GFQQAIIGLGTLVMMPVIGNLSD---QYGRKAMLTLPLTLSIIPLAILAYRRSI---------------SFFYAYYALRT 115 (438)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~D---r~Grk~~l~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~r~ 115 (438)
+.-.-...++..+++.+.+.+++ ++||++.+.++..+..+..++.-..... ..+....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 44344445666666666666665 5799999999888887777765543110 01567788889
Q ss_pred hhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 116 l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
+.|+ +.+......+.++.+.. +++|.++.++...-..++..++-...
T Consensus 362 l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 362 LLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999 99999999999999999 57888888888877777766654433
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.92 E-value=0.0035 Score=61.79 Aligned_cols=186 Identities=9% Similarity=0.059 Sum_probs=130.9
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
.+.+..++....+......++....-.-++++++++..+.|++.+.+-++..+.. ....+...|..|-+++-.|.++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i-~fVsYfG~r~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLI-IFVSYFGSRGHRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhh-HhHHHhccccCccceeeechhHHH
Confidence 3444444333333333333444444556677899999999999999999888877 555677788888888899999999
Q ss_pred HHHHHhHhcc-----------------------------------------c----------chHHHH--HHHHHhhhhh
Q 013707 325 INMFICSISW-----------------------------------------S----------AWVPYA--TTAFSVLVVF 351 (438)
Q Consensus 325 ~~~~~~~~~~-----------------------------------------~----------~~~~~~--~~~~~~~~~~ 351 (438)
++.++..+.+ + .+.+++ .++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 9988877620 0 111222 3677888889
Q ss_pred hHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhcC-CC--------CCCCC--chHHHHHHHHHH
Q 013707 352 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK-GA--------PFNFP--GFSIMCIGLASV 420 (438)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~-~~--------~~~~~--~~~~~~~~~~~~ 420 (438)
.++.-.+++-|.+.+++.....|+..++..+|-++|-.+++.....+.+. .. |-|.. +.-|++.+.+.+
T Consensus 254 i~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888776554 11 11111 124566666666
Q ss_pred HHHHHHHhhhh
Q 013707 421 RAFTYELLLSF 431 (438)
Q Consensus 421 ~~~~~~~~~~~ 431 (438)
+..+..++..+
T Consensus 334 ~~a~p~f~fPk 344 (735)
T KOG3626|consen 334 FSAVPLFFFPK 344 (735)
T ss_pred HHHHHHHhCcc
Confidence 66665555443
No 283
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.92 E-value=0.032 Score=51.55 Aligned_cols=110 Identities=12% Similarity=0.149 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHH--HH---HHHHHHHhcccchhHHHHHHHHHhhhhcchhh
Q 013707 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL--SI---IPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124 (438)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~--~~---~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 124 (438)
..+..+...+|.+|..++.--...+ |+ |+..+.+.+- .. +.....-+.++ .|..++.-+..|+ .+|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGL-lGGa 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGL-LGGA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-hhhH
Confidence 3566777788888877775533222 33 4444443332 22 22223334566 8888899999999 7788
Q ss_pred HhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.+......+.|-.|+++|..++|..+.+-++|..++..++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999988877554
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.61 E-value=0.26 Score=42.33 Aligned_cols=50 Identities=0% Similarity=-0.124 Sum_probs=29.4
Q ss_pred cchhHHHHHHHHHHHhhhhhh--HhhhH-----H--hhHHHHHHHHHHHHHHHHHHHHH
Q 013707 140 RQRASAFGILLGVLSASFVCG--TLAAR-----F--LSTTSAFQAATIVSMLAAAYMRV 189 (438)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g--~~l~~-----~--~~w~~~f~~~~~~~~i~~~~~~~ 189 (438)
++|+........+.++|.++. |.+-. . -.|++.+.+.+++.++.+++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555556666666554 33222 1 27999999888877665444333
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.46 E-value=0.64 Score=43.89 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013707 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (438)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (438)
..+.+.+..++..+..-+.....|.++.+.+.-+-.-.+..-....+..++.+ ...|.+.||..|.+....+....-++
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~-~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFG-PWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-HHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 35566778888888888889999999999876565555555556666667767 66678899999887665554433221
Q ss_pred ----HHHh--Hh-ccc-----chHHHHH----HHHHhhhhhhHHH-----HHHHHhhcC--CCCcchhHHHHHhhHhhhh
Q 013707 327 ----MFIC--SI-SWS-----AWVPYAT----TAFSVLVVFATPS-----FRSIVSKQV--GPNEQGKAQGCISGISSFA 383 (438)
Q Consensus 327 ----~~~~--~~-~~~-----~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~g~~~g~~~~~~~~g 383 (438)
..++ .+ ..+ .+..... .+.+......... -.-++..+. +++...+.++...-+-.+.
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~c 161 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFC 161 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHH
Confidence 1111 11 111 2222221 1222211111111 111223333 4455677777777788889
Q ss_pred hhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013707 384 NIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYEL 427 (438)
Q Consensus 384 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (438)
..++|.+.|.+.+.. .......+.++..++....-+
T Consensus 162 kllaPl~vG~l~t~~--------s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 162 KLLAPLFVGLLMTFA--------SPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHhhcc--------CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998852 222233334445555554443
No 286
>PRK03612 spermidine synthase; Provisional
Probab=96.30 E-value=0.29 Score=47.67 Aligned_cols=117 Identities=14% Similarity=0.003 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHH--HH-HHHHHHHhcccc--hhHHHHHHHHHhhhhcc
Q 013707 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL--SI-IPLAILAYRRSI--SFFYAYYALRTLTAMVC 121 (438)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~--~~-~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~ 121 (438)
+.+....+.+.+++..+..+|+.+.|++.++--|+.. .+-..+ .+ ++..+....... .....++..-++.++ .
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-l 123 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL-L 123 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 4445667889999999999999998887643222222 111111 11 111111111110 001222334455666 5
Q ss_pred hhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHH
Q 013707 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (438)
Q Consensus 122 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (438)
.|...|....+..+... ++-++..|.+.....+|.++|+++.++
T Consensus 124 ~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 124 IGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 66777776666654332 234667788888888888888887766
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.10 E-value=0.0019 Score=58.42 Aligned_cols=50 Identities=18% Similarity=0.192 Sum_probs=3.6
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHh
Q 013707 341 ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (438)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 390 (438)
.+.++++..|-.......+..+.+++++|..+-.+....-..|-.+|..+
T Consensus 254 ~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 254 LMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -------------HHHH---------------------------------
T ss_pred HHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788999999889999999999999998888777777777776666644
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.78 E-value=0.075 Score=49.56 Aligned_cols=110 Identities=12% Similarity=0.002 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHHHHHhHhcc---cc------hHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCC---cchhHHHHHhhHh
Q 013707 314 KLLSLGLFAACINMFICSISW---SA------WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN---EQGKAQGCISGIS 380 (438)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 380 (438)
+++.++.++..+|.+++.++. .. ..+++ ..+.++|.|..-|...++..|.++++ ++.+.+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567788888888888854432 11 34444 67789999999999999999999876 3567778888999
Q ss_pred hhhhhhhhHhHHHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 013707 381 SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASVRAFTYELLLSF 431 (438)
Q Consensus 381 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (438)
++|..+++.+.+++-++. .....|.+.++..+++.+..+.-++
T Consensus 82 n~G~~~~~~~~~~i~~~~--------~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY--------GWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS---------HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhHhhcccchhhcccc--------chhhhhhHHHHHHHHHHHHHHhCCc
Confidence 999999999999887652 3344566666667766666554443
No 289
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.76 E-value=0.21 Score=45.13 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (438)
....++.+.++...+.-+-......++.+.. .... .....-...-.....+..++.|...|+..|+|++...+
T Consensus 28 ~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~---gnsl----~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L 100 (503)
T KOG2601|consen 28 TVIFLYLGYFLTTWGDRMWEFSVSLFMILLG---GNSL----LLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL 100 (503)
T ss_pred eeehhhHHHHHhHhhHhHHHHHHHHHHHHHc---Ccee----hhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH
Confidence 3445667777777776666666666666542 1112 22233333445567778889999999999999988776
Q ss_pred HHH
Q 013707 89 TLS 91 (438)
Q Consensus 89 ~~~ 91 (438)
.+.
T Consensus 101 ~lq 103 (503)
T KOG2601|consen 101 LLQ 103 (503)
T ss_pred hhc
Confidence 543
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.79 E-value=0.47 Score=43.20 Aligned_cols=142 Identities=12% Similarity=0.068 Sum_probs=81.2
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhchhhH-HHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-----ILGEAKL-LSL 318 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~-~~~ 318 (438)
++.+..+.......+....... .+|..++. -|.|-++.+.......--.. - ++...+.| |+||||. +.-
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~sL--K-llWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFSL--K-LLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHHH--H-HHHHhhhHHHHHHhhccccceeee
Confidence 4556666666666666665555 77888885 37776665443322211111 1 33345555 9998774 444
Q ss_pred HHHHHHHHHHHhHhcccch---------HHHH---HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhh
Q 013707 319 GLFAACINMFICSISWSAW---------VPYA---TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 386 (438)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 386 (438)
+..+.+..+..++...+.+ .... .+++-+..+.--.....+.-+..++|+.|-+.......+..|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 5555555555555432211 1111 244455566666777777777888888887766666666666666
Q ss_pred hhHhH
Q 013707 387 SPLIF 391 (438)
Q Consensus 387 g~~~~ 391 (438)
+..+.
T Consensus 185 ~~~if 189 (510)
T KOG3574|consen 185 GNVVF 189 (510)
T ss_pred hccee
Confidence 55444
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.18 E-value=0.2 Score=43.15 Aligned_cols=126 Identities=13% Similarity=0.063 Sum_probs=72.3
Q ss_pred HHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH-HHHHHhhh
Q 013707 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLV 349 (438)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 349 (438)
+|+-+.+|+...++|.++.......++.+ .+.|-+.||.|||+....-++...++++. -..++..++.. -.+-|+..
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFG-tivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFG-TIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHH-HHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHH
Confidence 34455689999999888776656666666 67789999999998766555555554433 22333333333 35666666
Q ss_pred hhhHHHHHHH-HhhcCCCC-----cchhHHHHHh-hHhhhhhhhhhHhHHHHHHHH
Q 013707 350 VFATPSFRSI-VSKQVGPN-----EQGKAQGCIS-GISSFANIVSPLIFSPLTALF 398 (438)
Q Consensus 350 ~~~~~~~~~~-~~~~~~~~-----~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~ 398 (438)
...+...-++ +.|..+++ -....++-.. ..+.+-.+++...+..+.|++
T Consensus 139 sLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred HHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 6666666665 34443222 1122222221 223444455555555666654
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.87 E-value=0.78 Score=43.64 Aligned_cols=149 Identities=14% Similarity=0.135 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhH-HHHHHHHHHHHHHHHHHhhhhcccccccCcc-hHhH
Q 013707 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAI-YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK-AMLT 85 (438)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk-~~l~ 85 (438)
|.++...+..++.++-.-.+.|.+....+. ++.+.+. ...-....++.++-.+|..+..+.. .-++| +.+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~------~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~ 341 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTS------SGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLP 341 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeec------cCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchH
Confidence 345555666666555555555555333221 1111111 3445677888899988888654431 11222 1333
Q ss_pred HHHHHHHHH---HHHHHhcc------cchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhh
Q 013707 86 LPLTLSIIP---LAILAYRR------SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (438)
Q Consensus 86 ~~~~~~~~~---~~~~~~~~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (438)
+..+...+. .++|..-+ -..+-+..++..++.|+ ..|-.......+..+..+++||..+-.+...+..+|
T Consensus 342 i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl-tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~G 420 (437)
T TIGR00939 342 ILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF-SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVG 420 (437)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 333333222 22332221 01124666777899999 889888889999999999999988888888888888
Q ss_pred hhhhHhhh
Q 013707 157 FVCGTLAA 164 (438)
Q Consensus 157 ~~~g~~l~ 164 (438)
..+|..++
T Consensus 421 l~~Gs~l~ 428 (437)
T TIGR00939 421 LALGAVLS 428 (437)
T ss_pred HHHHHHHH
Confidence 88887654
No 293
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.41 E-value=0.017 Score=48.95 Aligned_cols=145 Identities=14% Similarity=0.029 Sum_probs=80.8
Q ss_pred cccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHH
Q 013707 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (438)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (438)
+++-.+....+...+.-......+.+++.|..+.++++.....++-++..+.....+.+..-.--++...|.....|.+.
T Consensus 198 F~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgii 277 (412)
T KOG4830|consen 198 FGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGII 277 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHH
Confidence 34455666777777777777778889999988878887777777666666665555422111100111122222233333
Q ss_pred HHHHHHHhHhcccch---HHHHHHHHHhhhhhhHHHHHHHHhhcCCCC--cchhHHHHHhhHhhhhhhhh
Q 013707 323 ACINMFICSISWSAW---VPYATTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVS 387 (438)
Q Consensus 323 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g 387 (438)
...+...+.+.+..+ ...+..++|+..........++..+...++ ..+-+.|..+....+...++
T Consensus 278 wifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA 347 (412)
T KOG4830|consen 278 WIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIA 347 (412)
T ss_pred HHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHH
Confidence 333333333333333 222356678877777666666655555443 34556676666666555444
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.33 E-value=7.7 Score=37.52 Aligned_cols=117 Identities=12% Similarity=0.005 Sum_probs=71.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc---------ccch-------------
Q 013707 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WSAW------------- 337 (438)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~------------- 337 (438)
+++.+..+-....+-..+.-..+..++++++++.++...........+.++++. ++..
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 556666654433333333323566799999999887665555444444443331 0000
Q ss_pred HHH------HHHHHH----hhhhhh-HHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 338 VPY------ATTAFS----VLVVFA-TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 338 ~~~------~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
..+ ...++- .-.... .-..+.+++|..+.++..+.+++.....++|..+++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 001111 111222 23568889999999999999999999999999988888887777
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.87 E-value=4.3 Score=40.08 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHH
Q 013707 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINM 327 (438)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 327 (438)
...+..-.+-..++.+...-+-.|+.+.++.+...+............... +.+++++|- .||.+++.++.++..++.
T Consensus 40 ~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~ 118 (571)
T KOG1237|consen 40 PFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGL 118 (571)
T ss_pred HHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 334444555566666666777888888888888766666655555555555 778899995 588888888888887776
Q ss_pred HHhHhccc--------------------ch-----HHHH-HHHHHhhhhhhHHHHHHHHhhcCCCC----cc--hhHHHH
Q 013707 328 FICSISWS--------------------AW-----VPYA-TTAFSVLVVFATPSFRSIVSKQVGPN----EQ--GKAQGC 375 (438)
Q Consensus 328 ~~~~~~~~--------------------~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--g~~~g~ 375 (438)
.++..... .. .++. ..+..+|.+..-|...++-.|-++++ .+ .+-+..
T Consensus 119 ~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW 198 (571)
T KOG1237|consen 119 FGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNW 198 (571)
T ss_pred HHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhH
Confidence 55544210 00 1112 23445677788899999988888732 22 356666
Q ss_pred HhhHhhhhhhhhhHhHHHHH
Q 013707 376 ISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 376 ~~~~~~~g~~~g~~~~g~l~ 395 (438)
.....+.|..++..+.-++-
T Consensus 199 ~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 199 FYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 66777777777666655553
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=90.35 E-value=11 Score=32.64 Aligned_cols=30 Identities=7% Similarity=-0.019 Sum_probs=13.9
Q ss_pred hhchhhHHHHHHHHhHc----CCChhHHHHHHHH
Q 013707 261 SEGGMQASFLYFLKAQF----HFNKNQFADLMLI 290 (438)
Q Consensus 261 ~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~ 290 (438)
..++.+..=..|.+++- +-|.....++++-
T Consensus 193 vlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~ 226 (254)
T PF07857_consen 193 VLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSH 226 (254)
T ss_pred HHHhcccchHHHHHhCccccCCCCCcchheeHHH
Confidence 33444444345666643 3344444445443
No 297
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=88.45 E-value=19 Score=32.58 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=49.2
Q ss_pred HHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCC
Q 013707 64 TLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS 138 (438)
Q Consensus 64 ~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 138 (438)
-...+.+.+.+..++|-|..+.++...+...... =+-+. +..++-.-...|+ +.+..+..--+|+++...
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr---~~tlVPa~~~~G~-aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPR---YETLVPAGLVLGM-AAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchh---HHhhccHHHhhcc-ccccccccCcceecHHHH
Confidence 3444555557889999999999888776544321 11233 7788888899999 888888777777766654
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.93 E-value=30 Score=33.20 Aligned_cols=118 Identities=12% Similarity=-0.024 Sum_probs=74.4
Q ss_pred CChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc---------cc-----------c-
Q 013707 279 FNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WS-----------A- 336 (438)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-----------~- 336 (438)
.+++.+..+-...-+ ++++.. ++..++.++..+.++...........++++++. ++ +
T Consensus 58 ~gae~I~FlK~~~vlP~avif~-~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFT-IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 445666666655555 344444 677799999998887766665555555555441 00 1
Q ss_pred -----------hHHHHHHHHH--hhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHHH
Q 013707 337 -----------WVPYATTAFS--VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (438)
Q Consensus 337 -----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 397 (438)
|......+.. .+.-...-..+..++|....++..+-+++++...+++..++..+..++.++
T Consensus 137 ~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 137 FLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred cceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1111111111 122222335677889999999999999999999998888888888777663
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.81 E-value=2.9 Score=37.13 Aligned_cols=73 Identities=15% Similarity=0.090 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhH
Q 013707 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (438)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (438)
.++.+...+..+.++ ++..++.-+..|+ -+|..+....--+.+-.++++|-.+++....+-++|..++..++-
T Consensus 327 l~ff~~~a~~~ftps---i~ivf~lI~~EGL-lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPS---IWIVFALILFEGL-LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHhccH---HHHHHHHHHHHhh-cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 345555667778888 8888999999999 445666666666777778899999999999988888887766653
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=85.39 E-value=14 Score=34.51 Aligned_cols=128 Identities=11% Similarity=0.124 Sum_probs=80.7
Q ss_pred hhhhhHHHHHHhhCCCCccchhhHHHHHHHHHH-HHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHH------
Q 013707 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAI-IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA------ 99 (438)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~-~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~------ 99 (438)
...+.|-+..+. .++...+.+..-++..+ +.+.-.+|.+.+.++-++= ||...+. .++..+..-+..
T Consensus 262 TLsiFPg~~~~~----~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~-v~lR~lfiPlF~~cn~~~ 335 (406)
T KOG1479|consen 262 TLSIFPGFCSEV----KSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIP-VLLRLLFIPLFLLCNYPP 335 (406)
T ss_pred eeEecchhhccc----ccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHH-HHHHHHHHHHHHHhccCC
Confidence 334556555442 21222234555666666 8889999877777776653 3433333 332222222222
Q ss_pred ---hcccchhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhh
Q 013707 100 ---YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (438)
Q Consensus 100 ---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (438)
+-.+ -++.++.-.+.|+ ..|-.......+..+..|++++..+-.+.......|...|..++
T Consensus 336 ~~v~~~~---~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 336 LPVVFES---DGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CCceecC---chHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 1223 4677888899999 88988888999999999988887777777777777777666544
No 301
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=84.48 E-value=12 Score=32.04 Aligned_cols=23 Identities=13% Similarity=0.001 Sum_probs=14.7
Q ss_pred HHHHHHHHhhchhhHHHHHHHHH
Q 013707 301 LFMPLLAPILGEAKLLSLGLFAA 323 (438)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~ 323 (438)
+.+..++.|+..|++.+.+.++.
T Consensus 258 igGk~lAskIS~rtVt~~ggi~F 280 (294)
T KOG2881|consen 258 IGGKYLASKISVRTVTLIGGILF 280 (294)
T ss_pred hhhHHHhhhheeEEEEEecchhH
Confidence 44456778888887665555443
No 302
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=78.36 E-value=0.78 Score=41.48 Aligned_cols=149 Identities=16% Similarity=0.167 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhCCCCccchhhHHHHH-HHHHHHHHHHHHHhhhhcccccc-cCcchHhHH
Q 013707 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTL 86 (438)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~ 86 (438)
..+...+..++..+..-...|.+..-.+... ..+ .+..... ....++.++-.+|....++.-=+ ..+|....
T Consensus 144 ~i~~~~~~i~~~f~vTl~~FP~it~~v~s~~---~~~--~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~- 217 (309)
T PF01733_consen 144 KIWPYALSIFLVFFVTLSVFPGITSAVQSSN---NPD--WSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI- 217 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhheeeeccceeeeeeccc---cCC--CccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHHH-
Confidence 3444455555555555555565533222110 111 1112222 35667888888888877653211 02444433
Q ss_pred HHHHHHH---HHHHHHhccc-------chhHHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhh
Q 013707 87 PLTLSII---PLAILAYRRS-------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (438)
Q Consensus 87 ~~~~~~~---~~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (438)
..+...+ ..+++-.-++ ..+-+..++.-++.|+ ..|-.......+..+..++++|..+-.+......+|
T Consensus 218 ~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~-TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 218 LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF-TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp --------------------------------------------------HHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH-ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 3222222 2222211111 0113566777888999 888888889999999999999988888888888888
Q ss_pred hhhhHhhh
Q 013707 157 FVCGTLAA 164 (438)
Q Consensus 157 ~~~g~~l~ 164 (438)
..+|..++
T Consensus 297 l~~Gs~ls 304 (309)
T PF01733_consen 297 LFIGSVLS 304 (309)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 88777654
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=76.75 E-value=61 Score=29.72 Aligned_cols=125 Identities=16% Similarity=0.101 Sum_probs=64.7
Q ss_pred HHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh-hH---HHHHHHH---HHHHHHHhHhcc--cchHH
Q 013707 269 FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA-KL---LSLGLFA---ACINMFICSISW--SAWVP 339 (438)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~---~~~~~~~---~~~~~~~~~~~~--~~~~~ 339 (438)
+........|-+..+.+.+.+.+-...-+++ .+...+.|.--.. -+ +..+.+. ..+.++.++... ..+.+
T Consensus 30 l~tLatyLlG~~Ilq~S~Iia~yl~amGlGs-~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 30 LGTLATYLLGGGILQTSLIIAGYLAAMGLGS-LLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHhcCCceeehHHHHHHHHHHhchhh-hhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 3333444467777777777776666665665 4444433321111 11 1122221 122222333322 33444
Q ss_pred HH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhhhhHhHHHHHH
Q 013707 340 YA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (438)
Q Consensus 340 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 396 (438)
+. ..++|...+.-.|....+.++.. ++.....+.....-++|...+.....++.-
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lll 164 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLL 164 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHh
Confidence 44 57788888888899888887732 222222333344477777777776666554
No 304
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=73.67 E-value=40 Score=30.62 Aligned_cols=94 Identities=19% Similarity=0.098 Sum_probs=46.3
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHH-HHHHHHhhhhhhHHH--------HHHHHhhcC---CCCc
Q 013707 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY-ATTAFSVLVVFATPS--------FRSIVSKQV---GPNE 368 (438)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~---~~~~ 368 (438)
++.+.+.+++|.|+++.++..........-.. +.....+ .....|++.+..+.. ...+..+.. .+..
T Consensus 76 m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~-pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~ 154 (390)
T KOG3097|consen 76 MFMPLLIRFLGTKWTMVLAVFPYALYIAANLE-PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGM 154 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-hhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCce
Confidence 45558889999999887766554432222111 1111222 245666666555433 223332221 1112
Q ss_pred chhHHHHHhhHhhhhhhhhhHhHHHHH
Q 013707 369 QGKAQGCISGISSFANIVSPLIFSPLT 395 (438)
Q Consensus 369 ~g~~~g~~~~~~~~g~~~g~~~~g~l~ 395 (438)
..+-.|....+...+..+|..+...+.
T Consensus 155 ~~~ffg~Ffii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 155 KVRFFGEFFIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred eeeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 245556555555555555554444443
No 305
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=69.90 E-value=93 Score=30.62 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhch
Q 013707 288 MLIAGLAGTISQLLFMPLLAPILGE 312 (438)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (438)
.....+.+.+++ ..++++-+.++.
T Consensus 303 i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 334444455555 555566665654
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.55 E-value=14 Score=26.78 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccc-CcchHhHHHH
Q 013707 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (438)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~ 88 (438)
...++-.+.-+++..+.....||+.||| |.++..++..
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4445666777888888888899999997 5555544433
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.75 E-value=38 Score=31.09 Aligned_cols=98 Identities=21% Similarity=0.143 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccccCcchH--hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhh
Q 013707 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM--LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (438)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 128 (438)
...|-.-++..+..+++.+..|.+--++.|..- +.++.+..+...+++.-+++ +|..+++.++... ......+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~---Iw~~Ya~yvlfr~-~y~l~iti 346 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH---IWVCYAGYVLFRV-IYQLTITI 346 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc---eehhhhhHHHHHh-hHhhhhhH
Confidence 456778888888999999999999888887643 34455555666666666777 8888888877776 56666778
Q ss_pred hhHhhhccCCccchhHHHHHHHHH
Q 013707 129 ALAYVADNISERQRASAFGILLGV 152 (438)
Q Consensus 129 ~~~~i~~~~~~~~r~~~~~~~~~~ 152 (438)
+..-+++..++|.-|..+|+....
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHH
Confidence 888888888888888888776543
No 308
>PRK15015 carbon starvation protein A; Provisional
Probab=65.13 E-value=1.6e+02 Score=29.66 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=54.6
Q ss_pred HHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhhcchhhHhhhhhHh-hhccCCc
Q 013707 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-VADNISE 139 (438)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-i~~~~~~ 139 (438)
.....++..-+|.++-+-|.+---+ .+..++...+..+-. ++.-++.+=+.+. -..-..|+-.-. =.|..|.
T Consensus 11 ~~~a~~ga~~~~~~al~rge~mnal---~lv~aa~~~y~iaYr---fYgr~ia~kv~~l-D~~r~TPA~~~~DG~DYvPt 83 (701)
T PRK15015 11 TVLSVMGAFALGYIALNRGEQINAL---WIVVASVCIYLIAYR---FYGLYIAKNVLAV-DPTRMTPAVRHNDGLDYVPT 83 (701)
T ss_pred HHHHHHHHHHheeeeecCCCchhHH---HHHHHHHHHHHHHHH---HHHHHHHHHhccC-CCCCCCCceECCCCCCcCcC
Confidence 4445666677888877777652211 111122222222323 3444445445565 433333321111 1355554
Q ss_pred cchhHHHHHHH-HHHHhhhhhhHhhhHHhhHH
Q 013707 140 RQRASAFGILL-GVLSASFVCGTLAARFLSTT 170 (438)
Q Consensus 140 ~~r~~~~~~~~-~~~~~g~~~g~~l~~~~~w~ 170 (438)
+ |-..+|-.. +..+.|.++||.++..+||-
T Consensus 84 ~-k~VLfGHHFasIAGAGPivGPvlAa~~Gwl 114 (701)
T PRK15015 84 D-KKVLFGHHFAAIAGAGPLVGPVLAAQMGYL 114 (701)
T ss_pred C-ccchhHHHHHHHhccCccHHHHHHHHHcch
Confidence 4 446666654 44578999999999999995
No 309
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=64.13 E-value=87 Score=26.33 Aligned_cols=49 Identities=10% Similarity=0.113 Sum_probs=24.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hchhhHHHHHHHHHHHH
Q 013707 277 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLSLGLFAACIN 326 (438)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 326 (438)
.|.+.....................++.++.++ .+++. +.-|.++..++
T Consensus 152 ~g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 152 LGLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 355555544544454544444443444445554 35554 55555555554
No 310
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=62.14 E-value=1.4e+02 Score=28.11 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=33.6
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhH----------cCCChhHHHHHHHHHHHHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ----------FHFNKNQFADLMLIAGLAGTISQLLFM 303 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (438)
+..+....+..++....+..+..-+-.++++. .+....+.+.+...+.+.+++.+.+..
T Consensus 297 Rg~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V 365 (536)
T COG3559 297 RGSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAV 365 (536)
T ss_pred cCccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666776666666655544444321 244555556666667777766653433
No 311
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=55.79 E-value=1.7e+02 Score=27.07 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=25.6
Q ss_pred ccCCccchhHHHHHHH-HHHHhhhhhhHhhhHHhhHHH
Q 013707 135 DNISERQRASAFGILL-GVLSASFVCGTLAARFLSTTS 171 (438)
Q Consensus 135 ~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~~w~~ 171 (438)
|..| .+|-..++..- ...+.|.++||.++..+||-.
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~aa~~GwlP 84 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILAAQFGWLP 84 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHHHHhcchH
Confidence 4444 44556677654 445789999999999999973
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.11 E-value=83 Score=23.01 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=27.2
Q ss_pred CcchhHHHHHhhHhhhhhhhhhHhHHHHHHHHhc
Q 013707 367 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (438)
Q Consensus 367 ~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 400 (438)
+.++.+.++--....+++.+-....|++.|++.+
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4567777777788888888888899999998643
No 313
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=52.57 E-value=2.2e+02 Score=27.31 Aligned_cols=121 Identities=15% Similarity=0.046 Sum_probs=65.7
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHh
Q 013707 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (438)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (438)
+..+-..+..++-....|...-...|.+.++..++.+..-+.+-++. ++--...++.|.|-....+.....++-.....
T Consensus 20 ~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaT-llq~~~~~~~g~~lP~~lG~sFafi~p~i~~~ 98 (451)
T COG2233 20 LLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGT-LLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIG 98 (451)
T ss_pred HHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HHHHhhccCcccCCCeeEechHHHHHHHHHHH
Confidence 33333334444555566777777789999999998888777777777 44323222344454444444444444433333
Q ss_pred cc-c--chHHHH-HHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHH
Q 013707 333 SW-S--AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (438)
Q Consensus 333 ~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (438)
.. . ...... .+..++......+.....+.+.+||-..|...-
T Consensus 99 ~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~ 144 (451)
T COG2233 99 GTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVL 144 (451)
T ss_pred hccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEee
Confidence 22 1 222222 233333333333333328888999888776543
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.74 E-value=41 Score=24.53 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc
Q 013707 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (438)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (438)
...|-.++.++-..++.+ ++.++..|+..+.+.=.+|..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~S-l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVAS-LLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHH-HHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456788899998888888 888999999887776666776666666555443
No 315
>PRK02237 hypothetical protein; Provisional
Probab=45.87 E-value=70 Score=23.45 Aligned_cols=51 Identities=10% Similarity=0.043 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhc
Q 013707 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (438)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (438)
.+.|-.++.++-..++.+ ++.++..|+..+.+.=.+|..++.++..++.+.
T Consensus 56 ~~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 346888999999988888 888899999887666666776666666555443
No 316
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=45.27 E-value=61 Score=22.47 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013707 170 TSAFQAATIVSMLAAAYMRV 189 (438)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~ 189 (438)
|+-.++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 56666777777766554443
No 317
>PRK11469 hypothetical protein; Provisional
Probab=43.81 E-value=1.9e+02 Score=23.96 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=31.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHh
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (438)
|.+.....................++.++.+++++|.-+.-|.++..++.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455555555453455566677888877777777777776543
No 318
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=40.50 E-value=1.5e+02 Score=21.82 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=25.4
Q ss_pred hcccchhHHHHHHHHHHHhhhchhhHHHHHHHHhHc
Q 013707 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (438)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
+.+.+.+.+..+...+..++++....+..+++.+.+
T Consensus 45 l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 45 LSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666677777777888888888888876654
No 319
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=40.47 E-value=3.3e+02 Score=25.81 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=49.9
Q ss_pred HHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhHhcccchHHHH--HHH
Q 013707 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA--TTA 344 (438)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 344 (438)
...|..+.+..|.|+++...+.....+...+++ ++..+-..++|.|..+..+.....+...........+.... .++
T Consensus 13 i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~t-llq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v 91 (406)
T TIGR03173 13 VAVPLIVGGALGLSAEQTAYLISADLFACGIAT-LIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIV 91 (406)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-HHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 344666667679999887777777777777776 33321111345555443333322222222111122222222 222
Q ss_pred HHhhhhhhHHHHHHHHhhcCCCCcchh
Q 013707 345 FSVLVVFATPSFRSIVSKQVGPNEQGK 371 (438)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (438)
.|+..-... .....+.+.+|+...|.
T Consensus 92 ~Gii~illg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 92 AGLFVILLA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HHHHHHHHH-HHHHHHHHHCCcHHHHH
Confidence 232222222 24556778888765443
No 320
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=39.98 E-value=60 Score=28.43 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=15.3
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhccCCC
Q 013707 409 GFSIMCIGLASVRAFTYELLLSFYVFSRWH 438 (438)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
|+..++..++.++.+++..++.||+++.||
T Consensus 262 giaalvllil~vvliiLYiWlyrrRK~swk 291 (295)
T TIGR01478 262 GIAALVLIILTVVLIILYIWLYRRRKKSWK 291 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 343333334444444444556666677775
No 321
>PTZ00370 STEVOR; Provisional
Probab=39.45 E-value=54 Score=28.78 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=14.8
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhccCCC
Q 013707 409 GFSIMCIGLASVRAFTYELLLSFYVFSRWH 438 (438)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
|+..++..++.++.+++..++.||+++.||
T Consensus 258 giaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 258 GIAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 333333333444444444455666667774
No 322
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=35.25 E-value=1.1e+02 Score=20.47 Aligned_cols=17 Identities=6% Similarity=0.182 Sum_probs=10.4
Q ss_pred HHHHHHHHHhcccCCCC
Q 013707 181 MLAAAYMRVFLKDDVPN 197 (438)
Q Consensus 181 ~i~~~~~~~~~~~~~~~ 197 (438)
+++-++.++.+|+.+..
T Consensus 50 ii~Yiia~~imP~~~~~ 66 (70)
T COG1983 50 IIAYIIAALIMPSEEDE 66 (70)
T ss_pred HHHHHHHHHHCCCCccc
Confidence 44455667778876543
No 323
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=35.09 E-value=2.2e+02 Score=22.55 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCCCcchhHHHHHhhHhhhhhhh
Q 013707 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 386 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 386 (438)
...|..++..-++++.|+..|+-..-.+.+...
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345666777788888999999988877765443
No 324
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=33.95 E-value=3.9e+02 Score=24.84 Aligned_cols=84 Identities=13% Similarity=0.049 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHH-----HHHHHHhcccc-hhHHHHHHHHHhhhhcchhh
Q 013707 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII-----PLAILAYRRSI-SFFYAYYALRTLTAMVCEGS 124 (438)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~-----~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 124 (438)
.+.+.+.+.+.....+++...-++.|.--.-+.+..-.++..+ ..+-..|+.+. .+-+.+++.-++.|. -.|.
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~-LVG~ 121 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV-LVGA 121 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH-HHhc
Confidence 3456677777777888888777777643332222222221111 11111333321 125778888888888 6788
Q ss_pred HhhhhhHhhhc
Q 013707 125 INCLALAYVAD 135 (438)
Q Consensus 125 ~~~~~~~~i~~ 135 (438)
-.|..+.++..
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 88988888876
No 325
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=33.21 E-value=1.2e+02 Score=19.61 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=15.1
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhcccCC
Q 013707 170 TSAFQAATIV---SMLAAAYMRVFLKDDV 195 (438)
Q Consensus 170 ~~~f~~~~~~---~~i~~~~~~~~~~~~~ 195 (438)
|..|.+...+ .++.-++.++.+|+.+
T Consensus 32 Rl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 32 RLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 6666555443 3344455667788765
No 326
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=32.63 E-value=1.8e+02 Score=20.58 Aligned_cols=49 Identities=2% Similarity=-0.152 Sum_probs=28.4
Q ss_pred cchhHHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHH
Q 013707 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL 293 (438)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 293 (438)
++..+......+...+++.....+.|..+.....-+....|+......+
T Consensus 15 ~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~ 63 (91)
T PF04341_consen 15 RRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQI 63 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHH
Confidence 3444455556666666777777777777766544234555665544433
No 327
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=31.69 E-value=5.1e+02 Score=25.47 Aligned_cols=51 Identities=12% Similarity=0.045 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhh
Q 013707 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (438)
Q Consensus 107 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (438)
+..+++...+..+ ..-....+..+.-+++.+|.-=|..|.++++..++|.-
T Consensus 405 f~lvI~~~~l~sf-~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 405 FLLVIIQHVLSSF-MSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 3445555566666 66777788899999999999999999999999888853
No 328
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=31.49 E-value=66 Score=23.51 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcc
Q 013707 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (438)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~ 102 (438)
.|=+.++|.=.+++.++.+++..|+.-+.+-=.++..+..++..+..+.|
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 36667777888899999999999998877776777777766666554443
No 329
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=31.16 E-value=4.6e+02 Score=24.76 Aligned_cols=149 Identities=11% Similarity=0.037 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH-----
Q 013707 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA----- 323 (438)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----- 323 (438)
..+.+..++..+.--+.......|+.+..|-|-...+..-.+-+....+.+ .+.|...|+..|+|.+.....+.
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg-~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLG-PIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhH-HHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 344556666666666666667777777656554444444444444445555 45567789999988766554432
Q ss_pred -HHHHHHhHhcc------cchHHHHHHHHHhhhhhhH---HHHHHHH------hhcCCCCcchhHH---HHHhhHhhhhh
Q 013707 324 -CINMFICSISW------SAWVPYATTAFSVLVVFAT---PSFRSIV------SKQVGPNEQGKAQ---GCISGISSFAN 384 (438)
Q Consensus 324 -~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~g~~~---g~~~~~~~~g~ 384 (438)
+.+.++..+.. +......+.++....+.+. .....+. .-....+.+.... +.....-....
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 22222222322 1222222222222222111 1111111 1111233343333 56666677788
Q ss_pred hhhhHhHHHHHHHH
Q 013707 385 IVSPLIFSPLTALF 398 (438)
Q Consensus 385 ~~g~~~~g~l~~~~ 398 (438)
.+.|.+.|.+.++.
T Consensus 189 ~Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 189 LLAPVITGLIITFV 202 (503)
T ss_pred chhhhhhcccceee
Confidence 89999999998864
No 330
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=29.77 E-value=4.9e+02 Score=24.63 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=26.0
Q ss_pred CccchhHHHHHHHHHHHhhhhhhHhhhHHhhHH
Q 013707 138 SERQRASAFGILLGVLSASFVCGTLAARFLSTT 170 (438)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w~ 170 (438)
.+++.+....+.++..+.|.+.-|..++.-||-
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i 34 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLW 34 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 456778888999999999988888877665653
No 331
>PRK11715 inner membrane protein; Provisional
Probab=28.95 E-value=5.3e+02 Score=24.77 Aligned_cols=65 Identities=11% Similarity=0.041 Sum_probs=31.7
Q ss_pred hchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHHh
Q 013707 310 LGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS 377 (438)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 377 (438)
+.+-..+++|+.+...-+++++++.+.. +... +.+....+......|.........||..++...
T Consensus 329 iHpiQYlLVGlAl~lFYLLLLSlSEHig-F~~A--YliAa~a~v~li~~Y~~~vl~~~k~g~~~~~~L 393 (436)
T PRK11715 329 IHPVQYLLVGLALVLFYLLLLSLSEHIG-FTLA--YLIAALACVLLIGFYLSAVLRSWKRGLLFAAAL 393 (436)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHH--HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 3444556667666666666666654332 1111 111122222333445555566677776665443
No 332
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=27.96 E-value=3.8e+02 Score=22.86 Aligned_cols=33 Identities=24% Similarity=0.125 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013707 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (438)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (438)
.-|+.+-+..+..++++..... +..|..++++.
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~l-l~~G~~s~~~s 192 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNL-LAMGIFSSKLS 192 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHH-HHHHHHHHHHH
Confidence 4566776777888888887766 77777777654
No 333
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=26.60 E-value=5.9e+02 Score=24.53 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=28.3
Q ss_pred CccchhHHHHHHHHHHHhhhhhhHhhhHHhhHHHHHHHHHHH
Q 013707 138 SERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIV 179 (438)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w~~~f~~~~~~ 179 (438)
.+++.+...++.+++.+.|.+.-|+..+..| -++..+..++
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~G-f~p~lillll 58 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFGG-LIPILLMLVL 58 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcch-HHHHHHHHHH
Confidence 3567788889999999999888888777643 3344443333
No 334
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=26.34 E-value=7.4e+02 Score=25.64 Aligned_cols=48 Identities=15% Similarity=0.073 Sum_probs=26.9
Q ss_pred hhcccccc----cCcchHhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHhhhh
Q 013707 70 VIGNLSDQ----YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (438)
Q Consensus 70 ~~G~l~Dr----~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (438)
+.+.++|. -||.+-+.++.++++++.+...+...+ .+.+...-++.++
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~--p~lf~~~l~~~tf 93 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK--PWLFAVGLTVSTF 93 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 34556664 356666677777777776666655441 3444444444443
No 335
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=26.26 E-value=5.9e+02 Score=24.42 Aligned_cols=64 Identities=11% Similarity=0.068 Sum_probs=30.5
Q ss_pred hchhhHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCcchhHHHHH
Q 013707 310 LGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI 376 (438)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 376 (438)
+.+-.-+++|+.+...-+++++++.+.. +... +.+....+......|.........+|..++..
T Consensus 323 iHpiQY~LVGlAl~lFYlLLLSlSEhi~-F~~A--YliAa~a~i~Li~~Y~~~vl~~~k~~~~~~~~ 386 (430)
T PF06123_consen 323 IHPIQYLLVGLALVLFYLLLLSLSEHIG-FNLA--YLIAALACIGLISLYLSSVLKSWKRGLIFAGL 386 (430)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHH--HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 3444456666666665556666554322 1111 11222223333444555556666666655543
No 336
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=26.21 E-value=3.9e+02 Score=22.33 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=11.3
Q ss_pred HHHHHHHHhhhhhhHhhhHHhhH
Q 013707 147 GILLGVLSASFVCGTLAARFLST 169 (438)
Q Consensus 147 ~~~~~~~~~g~~~g~~l~~~~~w 169 (438)
...-.+..+|.++|..+...++.
T Consensus 169 ~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 169 LLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334445555555555555554
No 337
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=26.15 E-value=93 Score=23.54 Aligned_cols=7 Identities=0% Similarity=-0.088 Sum_probs=2.8
Q ss_pred HHhhhhh
Q 013707 426 ELLLSFY 432 (438)
Q Consensus 426 ~~~~~~~ 432 (438)
.+.++|+
T Consensus 85 ~y~irR~ 91 (122)
T PF01102_consen 85 SYCIRRL 91 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344433
No 338
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=25.33 E-value=2.8e+02 Score=20.35 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=10.3
Q ss_pred HhhchhhHHHHHHHHHHHH
Q 013707 308 PILGEAKLLSLGLFAACIN 326 (438)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~ 326 (438)
+|..+++.........++.
T Consensus 84 er~~~~~~~a~~l~~~Gv~ 102 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVI 102 (113)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 5677776654444444333
No 339
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=24.84 E-value=5e+02 Score=23.16 Aligned_cols=56 Identities=16% Similarity=0.019 Sum_probs=34.1
Q ss_pred HHHHHHhhhhcchhhHhhhhhHhhhccCCccchhHHHHHHHHHHHhhhhhhHhhhHHh
Q 013707 110 YYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (438)
Q Consensus 110 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (438)
.-..|.+.|+ ---. ....++++.-.+|++++-...--...+.+++..+-|++|-.+
T Consensus 22 ~~~lr~~~g~-~~vl-f~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGF-PFVL-FLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHH-HHHH-HhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888887 3333 345899999999966544333333444445555566666544
No 340
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=24.79 E-value=1.5e+02 Score=24.35 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=15.5
Q ss_pred HHHHHHHHhhhhcccccccCc
Q 013707 60 IGLGTLVMMPVIGNLSDQYGR 80 (438)
Q Consensus 60 ~~l~~~~~~~~~G~l~Dr~Gr 80 (438)
|.+++.+++.+.|++.||..+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 366777777788888888764
No 341
>PRK02237 hypothetical protein; Provisional
Probab=24.44 E-value=1.3e+02 Score=22.15 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccCcchHhHHHHHHHHHHHHHHHhcc
Q 013707 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (438)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~~~~~~~~~~~ 102 (438)
.|=+.+.|.=.+++.++.+++..|+.-.-+-=.++..+..++..+..+.|
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 46677778888899999999999998776666666666666665544443
No 342
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=23.66 E-value=1.4e+02 Score=21.96 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 013707 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDV 195 (438)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 195 (438)
.+|+.+|++...++++.+.+.+.+.||..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 58999999877777666666666777654
No 343
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=22.85 E-value=5.3e+02 Score=22.74 Aligned_cols=66 Identities=17% Similarity=0.259 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhhhcccccc-cCcchHhH----HHHHHHHHHHHHH-Hhcccc-hhHHHHHHHHHhhhh
Q 013707 54 GFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT----LPLTLSIIPLAIL-AYRRSI-SFFYAYYALRTLTAM 119 (438)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~----~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~r~l~G~ 119 (438)
....-++..+..++....|++... +.||+.+. .+.+...+..+.. .+.++. .....+++.-++.|+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~ 216 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGF 216 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 344455566666777777877764 44555444 2233344443332 122221 125667888888888
No 344
>COG2119 Predicted membrane protein [Function unknown]
Probab=22.58 E-value=4.4e+02 Score=21.71 Aligned_cols=32 Identities=25% Similarity=0.143 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 013707 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (438)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (438)
.++..++. +.+.++++|+..|++-..+.++..
T Consensus 144 ~l~s~laV-l~G~~ia~ki~~r~l~~~aallFl 175 (190)
T COG2119 144 ILASVLAV-LLGKLIAGKLPERLLRFIAALLFL 175 (190)
T ss_pred HHHHHHHH-HHHHHHHccCCHHHHHHHHHHHHH
Confidence 44455544 677788999998887766555443
No 345
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=21.91 E-value=2.9e+02 Score=23.65 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=7.4
Q ss_pred hhhchhhHHHHHHH
Q 013707 260 LSEGGMQASFLYFL 273 (438)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (438)
+...+....+|.++
T Consensus 145 f~~ggliPLlp~~~ 158 (225)
T cd02434 145 FLVFGIIPLLPYLL 158 (225)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445556666554
No 346
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=20.96 E-value=4.3e+02 Score=20.99 Aligned_cols=27 Identities=7% Similarity=-0.028 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 013707 285 ADLMLIAGLAGTISQLLFMPLLAPILGE 312 (438)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (438)
.++.+...++..+.+ +-.|.++-.+..
T Consensus 99 ~~~~S~~~Fg~gllG-isYGilSaSWD~ 125 (153)
T PF11947_consen 99 VLLVSLVFFGLGLLG-ISYGILSASWDP 125 (153)
T ss_pred HHHHHHHHHHHHHHh-hhhhhcccccCC
Confidence 333444444444444 556677765543
No 347
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=20.86 E-value=8.3e+02 Score=24.24 Aligned_cols=39 Identities=21% Similarity=0.240 Sum_probs=25.9
Q ss_pred ccCCccchhHHHHHHH-HHHHhhhhhhHhhhHHhhHHHHHH
Q 013707 135 DNISERQRASAFGILL-GVLSASFVCGTLAARFLSTTSAFQ 174 (438)
Q Consensus 135 ~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~~w~~~f~ 174 (438)
|..|. +|-...|..- ...+.|.++||.++..+||-..++
T Consensus 48 DYVPt-nk~vlfGhHFaaIAGAGPivGPvlAAq~G~Lp~~L 87 (575)
T COG1966 48 DYVPT-NKWVLFGHHFASIAGAGPIVGPALAAQYGWLPAFL 87 (575)
T ss_pred ccccC-CchhhhHHHHHHHhccCcchhHHHHHHhcCcHHHH
Confidence 34443 3445566544 445789999999999999854433
No 348
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.77 E-value=2.5e+02 Score=22.14 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhcccccccCcch
Q 013707 60 IGLGTLVMMPVIGNLSDQYGRKA 82 (438)
Q Consensus 60 ~~l~~~~~~~~~G~l~Dr~Grk~ 82 (438)
|.++..+.+.+.|++.||..+++
T Consensus 62 yl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 62 YLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 37788888899999999988764
No 349
>COG1288 Predicted membrane protein [Function unknown]
Probab=20.54 E-value=7.6e+02 Score=23.69 Aligned_cols=29 Identities=21% Similarity=0.257 Sum_probs=18.0
Q ss_pred HhhcCCCCcchhHHHHHhhHhhhhhhhhhH
Q 013707 360 VSKQVGPNEQGKAQGCISGISSFANIVSPL 389 (438)
Q Consensus 360 ~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 389 (438)
+.|.+. -.|..+.-.++....+-+.+.|.
T Consensus 410 LaD~vg-v~RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 410 LADLVG-VPRQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred hHHhcC-CCHHHhhhhhhhcchhhheecCc
Confidence 455554 34555666677777777777763
No 350
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.46 E-value=1.2e+02 Score=20.52 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=23.8
Q ss_pred ccccCcchHhHHHHHHHHHHHHHHHhccc
Q 013707 75 SDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (438)
Q Consensus 75 ~Dr~Grk~~l~~~~~~~~~~~~~~~~~~~ 103 (438)
-|+-.|++-+.+.+.+...+.++..+...
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~ 39 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYR 39 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46677899999999998888888777765
No 351
>COG3462 Predicted membrane protein [Function unknown]
Probab=20.39 E-value=84 Score=22.91 Aligned_cols=31 Identities=3% Similarity=-0.023 Sum_probs=13.7
Q ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 013707 163 AARFLSTTSAFQAATIVSMLAAAYMRVFLKD 193 (438)
Q Consensus 163 l~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 193 (438)
.|+++||-...-+..++.++.+++..+.+-+
T Consensus 43 ~GG~yGm~lImpI~~~vvli~lvvfm~~~~g 73 (117)
T COG3462 43 MGGLYGMWLIMPIFWAVVLIFLVVFMFYILG 73 (117)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445565444444444444443444443333
No 352
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=20.31 E-value=2.1e+02 Score=25.21 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=38.6
Q ss_pred HHHHhhhchhhHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHH---------HHHHhhchhh
Q 013707 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP---------LLAPILGEAK 314 (438)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~~~~~~ 314 (438)
+..-.......+++-.|+++. |.++.....++....+...+.. ++.| +-.||+|||+
T Consensus 27 mlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st-~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 27 MLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAIST-PFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhc-ccccccccccccHHHhhhhccee
Confidence 333444455677888888885 8888887777777777666666 4443 4457888875
Done!