Citrus Sinensis ID: 013711

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------
Protein Sequence
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVTR
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHcccccccEEEEEEcccccEEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccccHcccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHcHHHcccccccEEEEccEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHEEcHHHHHHHHccccHHccccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccccEEEEEEEcccccccEEEEcccc
Coil and Loop (DISEMBL)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVcsttanftrnSTYEKNLNLLLSsiptnasrgngfssgffnatagqdpnrVYGLFlcrgdqttsdcqdCVTFAARDVLQLCPVSKETILWYAECLLRysdqsifstmatsptvsllntqnvtdqgRLNELVGTQMSQVVTQAVSNTKRfatrkanfttFQTLYSLaqctpdlsssdcntclrgavarlpsccsgkqggrvlfpscnvryelypfynesatappapapvllsppppgsvttsrgksgisssTIIAIVAPIAVTAVLFILGFCFLRRKAKKkynavpesnadndlttLESLQFDFETIEVATnkfstdnklgeggfgevykgvlpsgqEIAVKRLSKasgqgaeeFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTlknkdnwigqdvtr
Flexible Loop (DISEMBL)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVcsttanftrnsTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKynavpesnadndltTLESLQFDFETIEVATnkfstdnklgeGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYeftlknkdnwigqdvtr
Low Complexity Region (SEG)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNEsatappapapvllsppppgsvttsrgksgissstiiaivapiavtavLFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVTR
Disordered region (IsUnstruct)
***LKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYN*********************************STIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAV*******DLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVK***********EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIG*****
Disordered Region (DISOPRED)
*****FF*FSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAP*********************KSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVTR
Disordered Region (DISEMBL)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSPP*************ISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVTR
Disordered Region (DISPRO)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNES****************************ISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKK************DLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVT*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPLKFFMFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVTR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	437	2.2.26 [Sep-21-2011]
Q9M0X5	675	Cysteine-rich receptor-li	yes	no	0.929	0.601	0.496	1e-110
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.881	0.575	0.532	1e-106
Q8W4G6	627	Cysteine-rich receptor-li	no	no	0.871	0.607	0.497	1e-97
O65468	676	Cysteine-rich receptor-li	no	no	0.892	0.576	0.451	2e-96
O65482	830	Putative cysteine-rich re	no	no	0.931	0.490	0.442	4e-92
Q9LZU4	676	Cysteine-rich receptor-li	no	no	0.869	0.562	0.470	2e-91
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.862	0.572	0.480	1e-89
Q9C5S9	674	Cysteine-rich receptor-li	no	no	0.890	0.577	0.450	5e-88
Q8L7G3	659	Cysteine-rich receptor-li	no	no	0.897	0.594	0.447	6e-88
Q8H199	658	Cysteine-rich receptor-li	no	no	0.862	0.572	0.443	2e-87

>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/421 (49%), Positives = 275/421 (65%), Gaps = 15/421 (3%)

Query: 8   MFSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGN 67
           +FS+FL  +L      TV  D  Y  H+C  T  ++RNS+Y  NL  +LSS+   +S   
Sbjct: 11  LFSVFLFMILK-----TVTSDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSL---SSPNA 62

Query: 68  GFSSGFFNATAGQ--DPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWY 125
            ++S F NA AG+  D NRVYG+FLCRGD +   C+DCV FAA + LQ CP  K  ++WY
Sbjct: 63  AYASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWY 122

Query: 126 AECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQ--GRLNELVGTQMSQVVTQAVSNTKRF 183
            EC++RYS+QSI   M   P V L N QN+T+    R NE +   +  V  +A  ++++F
Sbjct: 123 DECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKF 182

Query: 184 ATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRY 243
           AT KANFT FQT+YSL QCTPDL++ DC +CLR  +  LP CC    GGRV+ PSC+ RY
Sbjct: 183 ATEKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRY 242

Query: 244 ELYPFYNESATAPPAPAPVLLS-PPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFIL 302
           ELYPFYNE+  A P   P   +   PP ++ + +GK    +  + AI  P++V  VL + 
Sbjct: 243 ELYPFYNETIAAAPMAPPPSSTVTAPPLNIPSEKGKGKNLTVIVTAIAVPVSV-CVLLLG 301

Query: 303 GFCF-LRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEV 361
             C+ L R+   K +A  E   ++ +T+ E+LQF F  IE ATNKFS  NKLG GGFGEV
Sbjct: 302 AMCWLLARRRNNKLSAETEDLDEDGITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEV 361

Query: 362 YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE 421
           YKG L +G+ +A+KRLS+ S QGAEEFKNEV +VAKLQHRNL +LLG+CL+GEEKILVYE
Sbjct: 362 YKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYE 421

Query: 422 F 422
           F
Sbjct: 422 F 422

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score =  385 bits (989), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/402 (53%), Positives = 275/402 (68%), Gaps = 17/402 (4%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRV 85
           A D  Y  H C  TAN+T NSTY  NL  LL+S+   +SR   +S+GF NAT GQ P+RV
Sbjct: 34  AQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL---SSRNASYSTGFQNATVGQAPDRV 90

Query: 86  YGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSP 145
            GLF CRGD +T  C+ CV+FA  D L  CP  KE  L+Y EC+LRYS+Q+I ST+ T+ 
Sbjct: 91  TGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTG 150

Query: 146 TVSLLNTQNVTDQ--GRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCT 203
            V L+NT+NVT      L++LV   ++Q  T A++++K+F TRK NFT  Q+ Y L QCT
Sbjct: 151 GVILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNSSKKFGTRKNNFTALQSFYGLVQCT 210

Query: 204 PDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVL 263
           PDL+  DC+ CL+  + ++P+    + G R++ PSC  RYE+Y FY ESA  PP P P +
Sbjct: 211 PDLTRQDCSRCLQLVINQIPT---DRIGARIINPSCTSRYEIYAFYTESAVPPPPPPPSI 267

Query: 264 LSP---PPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPE 320
            +P    PP S     GK G S   +IAIV PI V  +LFI G+CFL R+A+K Y   P 
Sbjct: 268 STPPVSAPPRS-----GKDGNSKVLVIAIVVPIIVAVLLFIAGYCFLTRRARKSY-YTPS 321

Query: 321 SNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA 380
           + A +D+TT +SLQ D+ TI+ AT+ F   NK+G+GGFGEVYKG L  G E+AVKRLSK+
Sbjct: 322 AFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKS 381

Query: 381 SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           SGQG  EFKNEVVLVAKLQHRNLVRLLGFCL+GEE++LVYE+
Sbjct: 382 SGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEY 423

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2

 Score =  357 bits (915), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 198/398 (49%), Positives = 258/398 (64%), Gaps = 17/398 (4%)

Query: 31  YATHVCSTTANFTRNSTYEKNLNLLLSSIPT-NASRGNGFSSGFFNATAGQDPNRVYGLF 89
           Y  H+C  T  ++RNS Y  NL  LLSS+   NAS    +S+GF +A AGQ P+RV GLF
Sbjct: 26  YIKHICPNTTTYSRNSPYLTNLRTLLSSLSAPNAS----YSTGFQSARAGQAPDRVTGLF 81

Query: 90  LCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSL 149
           LCRGD + + C++CV F+  D L  CP  ++++ +Y EC+LRYSDQ+I ST+A       
Sbjct: 82  LCRGDVSPAVCRNCVAFSINDTLVQCPSERKSVFYYDECMLRYSDQNILSTLAYDGAWIR 141

Query: 150 LNTQNVTDQGRLN---ELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDL 206
           +N     DQ ++N   + V + M+Q   +A S+ ++F T KA +T  QTLY L QCTPDL
Sbjct: 142 MNGNISIDQNQMNRFKDFVSSTMNQAAVKAASSPRKFYTVKATWTALQTLYGLVQCTPDL 201

Query: 207 SSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSP 266
           +  DC +CL  ++  +P     K GGR L+ SCN RYEL+ FYNE+ T     AP  L P
Sbjct: 202 TRQDCFSCLESSIKLMPLY---KTGGRTLYSSCNSRYELFAFYNET-TVRTQQAPPPLPP 257

Query: 267 PPPGSVTTSR--GKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNAD 324
                VT+    GKS  S+  ++AIV  I V A+L I G+CF +R      NA P  + D
Sbjct: 258 SSTPLVTSPSLPGKSWNSNVLVVAIVLTILVAALLLIAGYCFAKRVKNSSDNA-PAFDGD 316

Query: 325 NDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG 384
            D+TT ESLQ D+  I  ATNKFS +NK+G+GGFGEVYKG   +G E+AVKRLSK+SGQG
Sbjct: 317 -DITT-ESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQG 374

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
             EFKNEVV+VAKLQHRNLVRLLGF + G E+ILVYE+
Sbjct: 375 DTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEY 412

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2

 Score =  352 bits (904), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/401 (45%), Positives = 255/401 (63%), Gaps = 11/401 (2%)

Query: 31  YATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFL 90
           Y  H C     ++ NSTY  NL  LLSS    ASR   +S+GF N  AGQ P+RV GLFL
Sbjct: 39  YLNHDCPNRTTYSSNSTYSTNLKTLLSSF---ASRNASYSTGFQNIRAGQTPDRVTGLFL 95

Query: 91  CRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLL 150
           CRGD +   C +CV F+  + L  CP  +E + +Y EC+LRYS ++  ST+     + + 
Sbjct: 96  CRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYEECILRYSHKNFLSTVTYEGELIMR 155

Query: 151 NTQNVT----DQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDL 206
           N  N++     + +  +LV + M+Q   +A +++++F+T K   T+ QTLY L QCTPDL
Sbjct: 156 NPNNISSIQNQRDQFIDLVQSNMNQAANEAANSSRKFSTIKTELTSLQTLYGLVQCTPDL 215

Query: 207 SSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSP 266
           +  DC +CL  ++ R+      + G R  +PSCN RYELY FYNE+A   P+P P+    
Sbjct: 216 ARQDCFSCLTSSINRMMPLF--RIGARQFWPSCNSRYELYAFYNETAIGTPSPPPLFPGS 273

Query: 267 PPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNADND 326
            PP +  +  GKSG +S+ ++  +  +AV   + ++G+CFL ++ KK ++    S   +D
Sbjct: 274 TPPLTSPSIPGKSG-NSTVLVVAIVVLAVLLFIALVGYCFLAQRTKKTFDTASASEVGDD 332

Query: 327 LTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE 386
           + T +SLQ D+ TI+ ATN F+  NK+G GGFGEVYKG   +G+E+AVKRLSK S QG  
Sbjct: 333 MATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEA 392

Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK 427
           EFK EVV+VAKLQHRNLVRLLGF L+GEE+ILVYE+ + NK
Sbjct: 393 EFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEY-MPNK 432

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1

 Score =  338 bits (868), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 272/470 (57%), Gaps = 63/470 (13%)

Query: 24  TVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPN 83
           T A+D  Y  HVC + A F R+STY  NL  LLS++   +S    +S+GF NATAG+ P+
Sbjct: 134 TSALDPTYVYHVCPSWATFPRSSTYMTNLITLLSTL---SSPSASYSTGFQNATAGKHPD 190

Query: 84  RVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMAT 143
           RV GLF CRGD +   C+ CV+FA  +    CP+ KE  L+Y +C LRYS+++I ST  T
Sbjct: 191 RVTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNT 250

Query: 144 SPTVSLLNTQNVT--DQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQ 201
           +  + L N+QN+T  +Q R  +LV T M+Q    A +++KRF  R ANFTT  +LY+L Q
Sbjct: 251 NGGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQ 310

Query: 202 CTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPA- 260
           CT DL+  DC +CL+  + +LP+    K GG+ + PSC+ R+EL  FYN+SA   P P  
Sbjct: 311 CTHDLTRQDCLSCLQQIINQLPT---EKIGGQFIVPSCSSRFELCLFYNQSAVTTPQPQQ 367

Query: 261 ----------------------PVL--LSPP---------PPG-------SVTTSRGKSG 280
                                 P++  LS            PG        V+ + GK G
Sbjct: 368 NSAPPPPPTSIPSPRPGLNSRFPLITCLSAVSFEKFKDLLKPGFICILIKIVSENTGKGG 427

Query: 281 ISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNAD--------------ND 326
            SS  IIA+V  I    +LF+  F    ++ KK   A+P  N                + 
Sbjct: 428 NSSVIIIAVVVSITALLLLFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDS 487

Query: 327 LTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE 386
           +TT  SLQFDF+ I  ATN F   NKLG+GGFGEVYKG  PSG ++AVKRLSK SGQG  
Sbjct: 488 ITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGER 547

Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWIGQDVT 436
           EF+NEVV+VAKLQHRNLVRLLG+CLEGEEKILVYEF      ++   D T
Sbjct: 548 EFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTT 597

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1

 Score =  336 bits (861), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 192/408 (47%), Positives = 262/408 (64%), Gaps = 28/408 (6%)

Query: 31  YATHVC-STTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLF 89
           +  H C S+   ++RNSTY  NL    + + + +SR   +S+GF  ATAGQ P+RV GLF
Sbjct: 31  HLNHSCPSSILTYSRNSTYFTNLK---TLLSSLSSRNASYSTGFQTATAGQAPDRVTGLF 87

Query: 90  LCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSL 149
           LCRGD +   C++CV F+ ++ L  CP +KE +L+Y EC+LRYS ++I ST+    +  L
Sbjct: 88  LCRGDVSQEVCRNCVAFSVKETLYWCPYNKEVVLYYDECMLRYSHRNILSTVTYDGSAIL 147

Query: 150 LNTQNVT--DQGRLNE---LVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTP 204
           LN  N++  +Q +++E   LV + ++    +A +++K+F TRK    T Q LY L QCTP
Sbjct: 148 LNGANISSSNQNQVDEFRDLVSSTLNLAAVEAANSSKKFYTRKV--ITPQPLYLLVQCTP 205

Query: 205 DLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPA---- 260
           DL+  DC  CL+ ++  +      + GGR  +PSCN RYE Y FYNE+AT   +P     
Sbjct: 206 DLTRQDCLRCLQKSIKGMSLY---RIGGRFFYPSCNSRYENYSFYNETATRSSSPPSLPP 262

Query: 261 ------PVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKK 314
                  + L+PPP   + + RGK G +SS II +V PI    +LF+  F    +K +  
Sbjct: 263 RSTPQQQLKLAPPP---LISERGK-GRNSSVIIVVVVPIIALLLLFVAFFSLRAKKTRTN 318

Query: 315 YNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAV 374
           Y   P +   +D+TT  SLQFDF+ IE ATNKF   NKLG+GGFGEVYKG+ PSG ++AV
Sbjct: 319 YEREPLTEESDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAV 378

Query: 375 KRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           KRLSK SGQG  EF NEV++VAKLQHRNLVRLLGFCLE +E+ILVYEF
Sbjct: 379 KRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEF 426

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score =  330 bits (847), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 195/406 (48%), Positives = 260/406 (64%), Gaps = 29/406 (7%)

Query: 28  DREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYG 87
           D  Y  HVC  T   +RNS Y  NL  LL+S+ +N +    FS G  + T GQ+ + V+G
Sbjct: 28  DPTYVGHVC--TNRISRNSIYFSNLQTLLTSLSSNNAY---FSLGSHSLTKGQNSDMVFG 82

Query: 88  LFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTV 147
           L+LC+GD +   C++CV FAA+D    CP  KE ++ Y EC+L YSD++IF    T+ T+
Sbjct: 83  LYLCKGDLSPESCRECVIFAAKDTRSRCPGGKEFLIQYDECMLGYSDRNIFMDTVTTTTI 142

Query: 148 SLLNTQNVT-DQG-RLNELVGTQMSQVVTQAVSNT-KRFATRKANFTTFQTLYSLAQCTP 204
              NTQ VT DQ  R N+ V + M +   +A ++T K+FA +K++F++ Q+LY+  QC P
Sbjct: 143 ITWNTQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSSQSLYASVQCIP 202

Query: 205 DLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNES------ATAPPA 258
           DL+S DC  CL+ ++  L      K GGR L PSCN RYE+YPFY E+           A
Sbjct: 203 DLTSEDCVMCLQQSIKEL---YFNKVGGRFLVPSCNSRYEVYPFYKETIEGTVLPPPVSA 259

Query: 259 PAPVLLSPP--PPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYN 316
           P   L+S P  PPG     +GK+       I +   I+V   + +  F    ++AKK Y+
Sbjct: 260 PPLPLVSTPSFPPG-----KGKNSTVIIIAIVVPVAISVLICVAVFSF-HASKRAKKTYD 313

Query: 317 AVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKR 376
             PE   ++D+TT  SLQFDF+ IE AT+KFS  NKLG+GGFG+VYKG LP+G ++AVKR
Sbjct: 314 -TPE---EDDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKR 369

Query: 377 LSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           LSK SGQG +EFKNEVV+VAKLQHRNLV+LLGFCLE EEKILVYEF
Sbjct: 370 LSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEF 415

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1

 Score =  325 bits (832), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 185/411 (45%), Positives = 258/411 (62%), Gaps = 22/411 (5%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPT-NASRGNGFSSGFFNATAGQDPNR 84
           A D  Y  H C  T  ++ NSTY  NL  LLSS+ + NAS    +S+GF NATAG+ P+R
Sbjct: 24  AQDPFYLNHYCPNTTTYSSNSTYSTNLRTLLSSLSSRNAS----YSTGFQNATAGKAPDR 79

Query: 85  VYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATS 144
           V GLFLCRGD +   C++CV F+    L LCP  +E + +Y +C+LRYS ++I ST  T+
Sbjct: 80  VTGLFLCRGDVSPEVCRNCVAFSVNQTLNLCPKVREAVFYYEQCILRYSHKNILSTAITN 139

Query: 145 PTVSLLNTQNVT--DQGRLN---ELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSL 199
               +L+  N    +Q +++     V + MS+   +A +++++  T     T +Q LY L
Sbjct: 140 EGEFILSNTNTISPNQKQIDGFTSFVSSTMSEAAGKAANSSRKLYTVNTELTAYQNLYGL 199

Query: 200 AQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAP 259
            QCTPDL+ +DC +CL+ ++  +      + G R+ +PSC  RYELYPFYNESA   P  
Sbjct: 200 LQCTPDLTRADCLSCLQSSINGM---ALSRIGARLYWPSCTARYELYPFYNESAIETPPL 256

Query: 260 APVL--------LSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKA 311
            P          L   PP S ++  GKSG +S+ ++  V  +AV   + ++G+CFL +K 
Sbjct: 257 PPPPPPPPPRESLVSTPPISSSSLPGKSG-NSTVLVVAVVVLAVLLFIALVGYCFLAKKK 315

Query: 312 KKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQE 371
           KK ++    S   +D+ T +SLQ D+ TI+ ATN F+  NK+G GGFGEVYKG   +G+E
Sbjct: 316 KKTFDTASASEVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKE 375

Query: 372 IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +AVKRLSK S QG  EFK EVV+VAKLQHRNLVRLLGF L+GEE+ILVYE+
Sbjct: 376 VAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEY 426

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8L7G3|CRK7_ARATH Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1

 Score =  325 bits (832), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 185/413 (44%), Positives = 256/413 (61%), Gaps = 21/413 (5%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRV 85
           A D  +  + C     ++ NSTY  NL    + + + +SR   +S+GF NAT GQ  +RV
Sbjct: 23  AQDPRFLAYYCPNATTYSSNSTYLTNLK---TLLSSLSSRNASYSTGFQNATVGQALDRV 79

Query: 86  YGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSP 145
            GLFLCRGD +   C++CVTFA  +    CP  +E + +Y EC+LRYS ++I ST  T+ 
Sbjct: 80  TGLFLCRGDVSPEVCRNCVTFAVNNTFSRCPNQREAVFYYEECILRYSHKNILSTAITNE 139

Query: 146 TVSLLNTQNVTD--QGRLNE---LVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLA 200
              +L   N     Q ++N+   LV + M+Q+  +A  N ++F+T K   T  QT Y L 
Sbjct: 140 GEFILRNPNHISPIQNQINQFTNLVLSNMNQIAIEAADNPRKFSTIKTELTALQTFYGLV 199

Query: 201 QCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPA 260
           QCTPDLS  +C  CL  ++ R+P     + G R  +PSCN RYELY FYNE+A   P P 
Sbjct: 200 QCTPDLSRQNCMNCLTSSINRMPF---SRIGARQFWPSCNSRYELYDFYNETAIGTPPPP 256

Query: 261 PVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPE 320
              L+        +   KSG S+  ++A+V PI V  ++FI G+CF  ++AKK Y   P 
Sbjct: 257 LPPLA------SPSLSDKSGNSNVVVVAVVVPIIVAVLIFIAGYCFFAKRAKKTYGTTPA 310

Query: 321 SNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA 380
            + D D TT+ESLQ D+  I+ ATN FS +NK+G GGFG+VYKG   +G E+AVKRLSK 
Sbjct: 311 LDED-DKTTIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKT 369

Query: 381 SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK--DNWI 431
           S QG  EFKNEVV+VA L+H+NLVR+LGF +E EE+ILVYE+ ++NK  DN++
Sbjct: 370 SEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEY-VENKSLDNFL 421

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8H199|CRK14_ARATH Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2

 Score =  323 bits (828), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 177/399 (44%), Positives = 235/399 (58%), Gaps = 22/399 (5%)

Query: 36  CSTTANFTRNSTYEKNLNLLLSSIPTNAS-RGNGFSSGFFNATAGQDPNRVYGLFLCRGD 94
           C  T  F   S YE N  LLLSS+P+N S RG     GF+N++ GQ P+RVY L +C   
Sbjct: 25  CGKTGFFVPQSRYETNRGLLLSSLPSNVSARG-----GFYNSSIGQGPDRVYALGMCIEG 79

Query: 95  QTTSDCQDCVTFAARDVLQLCPVSKETILWYAE---CLLRYSDQSIFSTMATSPTVSLLN 151
                C DC+ +A+  +L  C    E + W  +   C++RYS+ S F ++   P   + N
Sbjct: 80  AEPDVCSDCIEYASNLLLDTCLNQTEGLAWPEKRILCMVRYSNSSFFGSLKAEPHFYIHN 139

Query: 152 ----TQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLS 207
               T N+T+  ++ E +  +M    T   S  K +A   A  T FQ +Y+L QCTPDLS
Sbjct: 140 VDDITSNLTEFDQVWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDLS 199

Query: 208 SSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPF---YNESATAPPAPAPVLL 264
             DC+ CLR +V    +CC+GKQGG V   SC  R+EL+PF   ++  + APP  +P   
Sbjct: 200 LEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAFP 259

Query: 265 SPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNAD 324
           + P   +  T +G   IS   + AI+ P  +   L +L   F+  + +K Y       + 
Sbjct: 260 TLPAVTNTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQG-----SS 314

Query: 325 NDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG 384
            D+T   SLQFDF+ IE ATNKFS  N +G GGFGEV+ GVL +G E+A+KRLSKAS QG
Sbjct: 315 TDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQG 373

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT 423
           A EFKNEVV+VAKL HRNLV+LLGFCLEGEEKILVYEF 
Sbjct: 374 AREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFV 412

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
255555033	579	ATP binding protein, putative [Ricinus c	0.887	0.670	0.621	1e-128
255555035	671	ATP binding protein, putative [Ricinus c	0.933	0.608	0.571	1e-128
255555031	674	ATP binding protein, putative [Ricinus c	0.887	0.575	0.587	1e-127
359474717	663	PREDICTED: cysteine-rich receptor-like p	0.871	0.574	0.576	1e-122
224113935	674	predicted protein [Populus trichocarpa]	0.910	0.590	0.576	1e-119
359474715	684	PREDICTED: cysteine-rich receptor-like p	0.938	0.599	0.554	1e-118
359496581	666	PREDICTED: cysteine-rich receptor-like p	0.871	0.572	0.535	1e-115
357444315	562	Cysteine-rich receptor-like protein kina	0.871	0.677	0.531	1e-114
357444317	673	Cysteine-rich receptor-like protein kina	0.871	0.566	0.531	1e-114
357444313	801	Cysteine-rich receptor-like protein kina	0.871	0.475	0.531	1e-114

>gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/404 (62%), Positives = 302/404 (74%), Gaps = 16/404 (3%)

Query: 29  REYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGL 88
           RE   +VCS T  FT NSTY+ NLN LLSS+  NA+     S GFFN  +GQ P+ VYG 
Sbjct: 27  REPLYYVCSNTTAFTPNSTYQTNLNKLLSSLSNNANN----SIGFFNIPSGQQPDDVYGS 82

Query: 89  FLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVS 148
           FLCRGD +T  CQDCVTFA +D+++ CP+ K  I+WY ECLLRY +QS  STM  +P + 
Sbjct: 83  FLCRGDVSTDVCQDCVTFATQDIVKRCPIEKVAIVWYDECLLRYENQSFISTMDQTPGLY 142

Query: 149 LLNTQNVT--DQGRLNELVGTQMSQVVTQA---VSNTKRFATRKANFTTFQTLYSLAQCT 203
           + NTQN++  DQ R N L+ + M+ + T+A    S  K+FA ++ +FT+FQ LYSL QCT
Sbjct: 143 MWNTQNISTSDQVRFNALLASTMNNLATEASTAASGEKKFAVKEDSFTSFQKLYSLVQCT 202

Query: 204 PDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVL 263
           PDLS+SDC  CL+ A++ LPSCC GKQGGRVL+PSCN+RYE+Y F+N +A  PP PAP  
Sbjct: 203 PDLSTSDCGQCLQTAISNLPSCCGGKQGGRVLYPSCNIRYEVYLFFNATALEPPPPAPSP 262

Query: 264 LSPPPP-----GSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAV 318
           + P PP     G+     GK GIS+ TIIAIVAPIAV  VLF LG C+LRR+  KKY AV
Sbjct: 263 VVPLPPPPTGLGAKPQIEGKRGISTVTIIAIVAPIAVATVLFSLGCCYLRRR--KKYEAV 320

Query: 319 PESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 378
            E +A N++TT ESLQ D  TIEVATNKFS DNKLGEGGFGEVYKG LP+GQEIAVK+LS
Sbjct: 321 QEDDARNEITTAESLQIDLNTIEVATNKFSADNKLGEGGFGEVYKGTLPNGQEIAVKKLS 380

Query: 379 KASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++SGQGAEEFKNEV L+AKLQHRNLVRLLGFCLEG EKILVYEF
Sbjct: 381 RSSGQGAEEFKNEVALLAKLQHRNLVRLLGFCLEGAEKILVYEF 424

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/422 (57%), Positives = 299/422 (70%), Gaps = 14/422 (3%)

Query: 9   FSLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNG 68
           F + L++LL        A   EY  H CS T  FT NSTY+ NLN     + ++ S    
Sbjct: 7   FPIILLFLLRLAI-IVKAESPEYRYHFCSNTTTFTPNSTYQTNLN----QVLSSLSNNAN 61

Query: 69  FSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAEC 128
            S GFFN  +GQ P+ VYG FLCRGD +T  CQDCVTFA +D+++ CP+ K  I+WY +C
Sbjct: 62  NSIGFFNIPSGQQPDDVYGSFLCRGDVSTDVCQDCVTFATQDIVKRCPIEKVAIVWYDQC 121

Query: 129 LLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQA---VSNTKRFAT 185
           LLRY +QS  STM  +P V L NTQ+++D  R + L+ T M  + T A    S  K+FA 
Sbjct: 122 LLRYENQSFISTMDQTPGVFLSNTQDISDPDRFDNLLATTMENLATDASSAASGEKKFAA 181

Query: 186 RKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYEL 245
              NFT FQ LYSL QCTPDLS+  C  CLRGA++ LPSCC GK+G  VL+PSCNVRYE+
Sbjct: 182 TDDNFTAFQKLYSLVQCTPDLSNPGCRQCLRGAISNLPSCCGGKRGANVLYPSCNVRYEV 241

Query: 246 YPFYNESATAPPAPAPVLLSPPP----PGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFI 301
           YPF+N +A  PP P+P    PPP     G+   + G+SGIS+  I+AIVAP+A+  VLF 
Sbjct: 242 YPFFNATAVEPPPPSPSPAVPPPPPTGSGTRPETEGQSGISTVIIVAIVAPVAIAIVLFS 301

Query: 302 LGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEV 361
           L +C+LRR+ +KKY+AV E    N++TT+ESLQ D  T+E ATNKFS DNKLGEGGFGEV
Sbjct: 302 LAYCYLRRRPRKKYDAVQEDG--NEITTVESLQIDLNTVEAATNKFSADNKLGEGGFGEV 359

Query: 362 YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE 421
           YKG+LP+GQEIAVK+LS++SGQGA+EFKNEVVL+AKLQHRNLVRLLGFCLEG EKILVYE
Sbjct: 360 YKGILPNGQEIAVKKLSRSSGQGAQEFKNEVVLLAKLQHRNLVRLLGFCLEGAEKILVYE 419

Query: 422 FT 423
           F 
Sbjct: 420 FV 421

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555031|ref|XP_002518553.1| ATP binding protein, putative [Ricinus communis] gi|223542398|gb|EEF43940.1| ATP binding protein, putative [Ricinus communis]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/398 (58%), Positives = 297/398 (74%), Gaps = 10/398 (2%)

Query: 31  YATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFL 90
           Y  HVCS T  F  NSTY+ NLN L  S+  NA+     S GF+N ++GQDP+ +YGLFL
Sbjct: 30  YLYHVCSNTTTFAPNSTYQTNLNQLFPSLSNNANN----SIGFYNRSSGQDPDDIYGLFL 85

Query: 91  CRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLL 150
           CRGD +T  CQDCVTFA++D+++ CP+ K  I+WY ECLL Y+++S++S MA  P V LL
Sbjct: 86  CRGDVSTDVCQDCVTFASQDIVKRCPIEKVAIVWYDECLLHYANRSLYSIMAQEPGVFLL 145

Query: 151 NTQNVTDQGRLNELVGTQMSQVVTQAVS---NTKRFATRKANFTTFQTLYSLAQCTPDLS 207
           N QN+ DQ R N L+ T M ++ T+A S     K+FA +  NFT F+ LYSL QCTPDLS
Sbjct: 146 NVQNIADQDRFNNLLATTMGKLATEAASAASGEKKFAVKIDNFTAFEKLYSLVQCTPDLS 205

Query: 208 SSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESA---TAPPAPAPVLL 264
           + DC  CL+ A++ LP+CC GK+GGRVL+PSCN+RYE+YPF+N +A     P     V  
Sbjct: 206 NLDCGRCLQAAISNLPTCCDGKRGGRVLYPSCNIRYEVYPFFNVTALEPPPPSPSPVVPP 265

Query: 265 SPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNAD 324
            P   G+   ++GKSG+S+ TI+AIVAP+AV  V F LG C+LRR+A+KKY+A  E +A 
Sbjct: 266 PPTSSGTRPETKGKSGLSTVTIVAIVAPVAVAIVFFFLGCCYLRRRARKKYDAGQEDDAG 325

Query: 325 NDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG 384
           N++TT+ESLQ D  TIE AT+KFS  NKLGEGGFG+VYKG LP+GQEIAVK+LS++S QG
Sbjct: 326 NEITTVESLQIDLNTIEAATDKFSAANKLGEGGFGKVYKGTLPNGQEIAVKKLSRSSVQG 385

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           A+EFKNEVVL+AKLQHRNLVRLLGFCLEG EKILVYEF
Sbjct: 386 AQEFKNEVVLLAKLQHRNLVRLLGFCLEGAEKILVYEF 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/397 (57%), Positives = 282/397 (71%), Gaps = 16/397 (4%)

Query: 31  YATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRV-YGLF 89
           Y  H+C  T  F  NS+YE NLN  LSS+ +NA+R     +GF+N TAG+ P  V YGLF
Sbjct: 24  YLYHICPNTTTFNPNSSYETNLNFALSSLSSNATR----DTGFYNVTAGRTPPDVAYGLF 79

Query: 90  LCRGDQTTSDCQDCVTFAARD-VLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVS 148
           LCRGD T+  CQDCV  A  + V Q C   K+ I+WY EC+LRYS++S FS ++ SP VS
Sbjct: 80  LCRGDVTSQVCQDCVATAVNETVRQRCRGFKQAIIWYDECMLRYSNESFFSQVSESPRVS 139

Query: 149 LLNTQNVTDQGRLNELVGTQMSQVVTQAVSNT--KRFATRKANFTTFQTLYSLAQCTPDL 206
           + NTQN+T+  + N+++G  +  + TQAV++   K+FAT++ NFT FQ +YSL QCTPDL
Sbjct: 140 MWNTQNITEPDQFNQVLGDTLDSIRTQAVNDQSGKKFATKEENFTGFQRVYSLVQCTPDL 199

Query: 207 SSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSP 266
           S   C+ CL G +A LP CC GKQG RVLFPSCNVRYELYPFY   A  P  P       
Sbjct: 200 SPDQCDRCLIGTIAILPDCCGGKQGARVLFPSCNVRYELYPFYQSVAAPPSPPPARP--- 256

Query: 267 PPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLF-ILGFCFLRRKAKKKYNAVPESNADN 325
               S  ++ GK GISS TI+ IV P  V+ V+F IL +CF+RR AKK+Y+ +   N + 
Sbjct: 257 ----SEPSTEGKGGISSKTIVIIVVPTFVSVVIFSILCYCFIRRCAKKRYDTLEAENVEF 312

Query: 326 DLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGA 385
           ++TT +SLQFD  TI+ ATN FS  NK+GEGGFG VYKG L SGQEIA+KRLSK+SGQGA
Sbjct: 313 NITTEQSLQFDLATIQAATNNFSDHNKIGEGGFGAVYKGTLSSGQEIAIKRLSKSSGQGA 372

Query: 386 EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE+
Sbjct: 373 VEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEY 409

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113935|ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1| predicted protein [Populus trichocarpa]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/406 (57%), Positives = 300/406 (73%), Gaps = 8/406 (1%)

Query: 23  FTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDP 82
            T A D  +    C  T  FTRNSTY+ NLNLLLSS+ +NA+R N   +GF+N +AGQDP
Sbjct: 19  ITQAQDPTFLYPYCPNTTTFTRNSTYQANLNLLLSSLSSNATRNN--INGFYNVSAGQDP 76

Query: 83  NRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMA 142
           + VYG+FLCRGD + S C++CV FAA+DVL+ CP+ K  ++W+ EC LRYS+++IFST+ 
Sbjct: 77  DAVYGMFLCRGDVSNSVCRNCVNFAAKDVLERCPIEKVAMIWFDECELRYSNRNIFSTVD 136

Query: 143 TSPTVSLLNTQNVTDQ-GRLNELVGTQMSQVVTQAVS---NTKRFATRKANFTTFQTLYS 198
              T+ +++  NVT Q  R N+LV T ++ +  +A S     K+FA ++ N+T  Q LY+
Sbjct: 137 QDFTLFMMSPNNVTVQPDRFNQLVETTINDIAARAASAPSGAKKFAVQQVNYTGIQKLYT 196

Query: 199 LAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPA 258
           L QCTPDLS+ DC+ CL+GA+++L +CC+ KQGGRVLF SCN RYELY FYN +A A  A
Sbjct: 197 LVQCTPDLSTPDCSRCLQGAISKLGNCCNRKQGGRVLFASCNFRYELYEFYNATAAAEAA 256

Query: 259 PAPVLLSPPPPGSV--TTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYN 316
           P P  ++  PP +    T +GK G+S+  IIAI+ P+ V+ VLF LGFCFL R+AK   N
Sbjct: 257 PPPPPVALSPPPTSGPETRKGKGGVSTVLIIAILIPVTVSLVLFCLGFCFLSRRAKSNKN 316

Query: 317 AVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKR 376
           +  E++  N++T +ESLQFD  +I+ ATN FS DNKLGEGGFGEVYKG LP+GQ IAVKR
Sbjct: 317 SAQENDVGNEITNVESLQFDLSSIQDATNHFSADNKLGEGGFGEVYKGTLPNGQAIAVKR 376

Query: 377 LSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           LSK SGQGA EFKNEV+LVAKLQHRNLVRLLGFCLEGEEKILVYEF
Sbjct: 377 LSKGSGQGAAEFKNEVILVAKLQHRNLVRLLGFCLEGEEKILVYEF 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474715|ref|XP_003631522.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 2 [Vitis vinifera]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/433 (55%), Positives = 295/433 (68%), Gaps = 23/433 (5%)

Query: 9   FSLFLIYLLSFQFSFT---VAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASR 65
           FS  L++L +   + +   +    +Y  HVCS T     NSTY+ NLN LLSS+ +NA+R
Sbjct: 5   FSRNLLFLCALGLAISCLAIQAAPDYIHHVCSNTTTIQPNSTYQTNLNSLLSSLSSNATR 64

Query: 66  GNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWY 125
            NGF    +NATAGQ P+  YGLFLCRGD    DC+DCV  A+ ++LQ C   K+ I+WY
Sbjct: 65  ANGF----YNATAGQSPDVAYGLFLCRGDVAIDDCRDCVANASAEILQQCSGVKKAIIWY 120

Query: 126 AECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNT--KRF 183
            +C+L YS++SIFS +  +P + L N QNVTD G  N+LV   M+   T A ++   K+F
Sbjct: 121 DQCMLHYSNRSIFSRVEENPMLQLYNLQNVTDPGPFNQLVVDTMNATATLAANDESGKKF 180

Query: 184 ATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRY 243
           AT++ NFT  QTLYSL QCTPDLS +DC+ CL GA+  L  CCSGKQG R L PSCN RY
Sbjct: 181 ATKEENFTGSQTLYSLVQCTPDLSIADCSKCLEGAIGALSLCCSGKQGARTLTPSCNARY 240

Query: 244 ELYPFYNESA-------TAPPAPAPVLLSPPPPGSVT------TSRGKSGISSSTIIAIV 290
           ELYPFY   A          P  A VLL PPP  S        ++ GK GISS TI+ IV
Sbjct: 241 ELYPFYQLEAGPLAPALAPAPTSATVLLPPPPAPSSKSSATEPSTEGKGGISSKTIVIIV 300

Query: 291 APIAVTAVLF-ILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFST 349
            P  V+ V+F IL +CF+RR AKK+Y+ +   N + ++TT +SLQFD  TI+ ATN FS 
Sbjct: 301 VPTFVSVVIFSILCYCFIRRCAKKRYDTLEAENVEFNITTEQSLQFDLATIQAATNNFSD 360

Query: 350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGF 409
            NK+GEGGFG VYKG L SGQEIA+KRLSK+SGQGA EFKNEVVLVAKLQHRNLVRLLGF
Sbjct: 361 HNKIGEGGFGAVYKGTLSSGQEIAIKRLSKSSGQGAVEFKNEVVLVAKLQHRNLVRLLGF 420

Query: 410 CLEGEEKILVYEF 422
           CLEGEEKILVYE+
Sbjct: 421 CLEGEEKILVYEY 433

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496581|ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/392 (53%), Positives = 278/392 (70%), Gaps = 11/392 (2%)

Query: 36  CSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQ 95
           C+  +N+  NSTY+ +LN+LL+S+ ++A+  NG    F N TAGQ P+ VYGL+LCRGD 
Sbjct: 33  CTENSNYVPNSTYQSSLNVLLTSLSSDATILNG--RKFHNTTAGQAPDMVYGLYLCRGDV 90

Query: 96  TTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNV 155
           T + CQDCV  A++++L  CP  KE + WY +C+LRYS++SIFS M   P +++ N+ ++
Sbjct: 91  TDAVCQDCVQTASQEILTKCPNRKEALSWYDQCMLRYSNRSIFSIMEERPMLTMSNSLDM 150

Query: 156 TDQGRLNELVGTQMSQVVTQAVSNTKR---FATRKANFTTFQTLYSLAQCTPDLSSSDCN 212
            D  R +++V   M  ++ +A  N+     F T +ANF     +Y L QCTPDLS S+C+
Sbjct: 151 DDPDRFDQIVNKTMVGLIEKATHNSSERDMFETGEANFNASTKIYGLVQCTPDLSGSNCS 210

Query: 213 TCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPVLLSPPPPGSV 272
           TCL    +R+ +CC GKQG R+L PSCN RYELYPFY + A A P             S+
Sbjct: 211 TCLENIFSRITNCCLGKQGARILVPSCNFRYELYPFYGDLAAATPPAPAPSPL-----SL 265

Query: 273 TTSRGKSGISSSTIIAIVAPIAVTAVLF-ILGFCFLRRKAKKKYNAVPESNADNDLTTLE 331
            +  GK G SS  +IAI+ P+AV+ V+F IL +CF+ RKAKKKY++  E   +ND+TT++
Sbjct: 266 LSPPGKKGNSSQLLIAIIVPVAVSVVIFSILCYCFICRKAKKKYSSTEEEKVENDITTVQ 325

Query: 332 SLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE 391
           SLQFDF T+E ATN FS DNK+GEGGFG+VYKG L SG+EIA+KRLS++S QGA EFKNE
Sbjct: 326 SLQFDFGTLEAATNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSSAQGAVEFKNE 385

Query: 392 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT 423
           VVLVAKLQHRNLVRLLGFCLEGEEKILVYE+ 
Sbjct: 386 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEYV 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444315|ref|XP_003592435.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481483|gb|AES62686.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/401 (53%), Positives = 279/401 (69%), Gaps = 20/401 (4%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDP-NR 84
           A D  +    C  T  F+ N+TY+ NLN LLS + +N++  NGF   ++      +P N 
Sbjct: 35  ATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKNGF---YYTTVGANNPVNT 91

Query: 85  VYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATS 144
           VYG FLCRGD+T  +C+DCV+ A+  + Q CP +KE+++W AEC++RYS+ S F+  A  
Sbjct: 92  VYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLAECMIRYSNVSFFNVAAEV 151

Query: 145 PTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSN--TKRFATRKANFTTFQTLYSLAQC 202
           P ++L+NT  V +Q R  +L+   M+    +AV+    K+F T+ ANF++FQTLY+LAQC
Sbjct: 152 PVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFGTKVANFSSFQTLYTLAQC 211

Query: 203 TPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPV 262
           TPDLS+S C  CL+ A   +PSCCSGKQG RVL PSCN+RYELYPFY+E       PAP 
Sbjct: 212 TPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYELYPFYHELN----VPAPD 267

Query: 263 LLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKK-KYNAVPES 321
              P P G       KS  S   I+AIVAPI V  +L  L  C++  K K+ K+N+VP+ 
Sbjct: 268 EPRPNPQGK------KSRNSVVLIVAIVAPI-VIILLLTLFVCWIISKMKRIKFNSVPQE 320

Query: 322 NADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS 381
           + +  ++ +E LQFDF+TI  ATN FS DNKLGEGGFGEVYKG+L +GQEIAVKRLS++S
Sbjct: 321 SVE--ISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSS 378

Query: 382 GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           GQG EEFKNEVVLVAKLQHRNLVR+LGFCL+GEEK+L+YEF
Sbjct: 379 GQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEF 419

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/401 (53%), Positives = 279/401 (69%), Gaps = 20/401 (4%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDP-NR 84
           A D  +    C  T  F+ N+TY+ NLN LLS + +N++  NGF   ++      +P N 
Sbjct: 35  ATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKNGF---YYTTVGANNPVNT 91

Query: 85  VYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATS 144
           VYG FLCRGD+T  +C+DCV+ A+  + Q CP +KE+++W AEC++RYS+ S F+  A  
Sbjct: 92  VYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLAECMIRYSNVSFFNVAAEV 151

Query: 145 PTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSN--TKRFATRKANFTTFQTLYSLAQC 202
           P ++L+NT  V +Q R  +L+   M+    +AV+    K+F T+ ANF++FQTLY+LAQC
Sbjct: 152 PVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFGTKVANFSSFQTLYTLAQC 211

Query: 203 TPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPV 262
           TPDLS+S C  CL+ A   +PSCCSGKQG RVL PSCN+RYELYPFY+E       PAP 
Sbjct: 212 TPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYELYPFYHELN----VPAPD 267

Query: 263 LLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKK-KYNAVPES 321
              P P G       KS  S   I+AIVAPI V  +L  L  C++  K K+ K+N+VP+ 
Sbjct: 268 EPRPNPQGK------KSRNSVVLIVAIVAPI-VIILLLTLFVCWIISKMKRIKFNSVPQE 320

Query: 322 NADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS 381
           + +  ++ +E LQFDF+TI  ATN FS DNKLGEGGFGEVYKG+L +GQEIAVKRLS++S
Sbjct: 321 SVE--ISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSS 378

Query: 382 GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           GQG EEFKNEVVLVAKLQHRNLVR+LGFCL+GEEK+L+YEF
Sbjct: 379 GQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEF 419

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444313|ref|XP_003592434.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481482|gb|AES62685.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/401 (53%), Positives = 279/401 (69%), Gaps = 20/401 (4%)

Query: 26  AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDP-NR 84
           A D  +    C  T  F+ N+TY+ NLN LLS + +N++  NGF   ++      +P N 
Sbjct: 35  ATDLSFIQSYCPNTNTFSSNTTYQTNLNKLLSILSSNSTNKNGF---YYTTVGANNPVNT 91

Query: 85  VYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMATS 144
           VYG FLCRGD+T  +C+DCV+ A+  + Q CP +KE+++W AEC++RYS+ S F+  A  
Sbjct: 92  VYGAFLCRGDRTQKECKDCVSAASNQIPQKCPKAKESVIWLAECMIRYSNVSFFNVAAEV 151

Query: 145 PTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSN--TKRFATRKANFTTFQTLYSLAQC 202
           P ++L+NT  V +Q R  +L+   M+    +AV+    K+F T+ ANF++FQTLY+LAQC
Sbjct: 152 PVLALMNTGTVMEQNRFMQLLADTMNAAAVEAVNGGGDKKFGTKVANFSSFQTLYTLAQC 211

Query: 203 TPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNESATAPPAPAPV 262
           TPDLS+S C  CL+ A   +PSCCSGKQG RVL PSCN+RYELYPFY+E       PAP 
Sbjct: 212 TPDLSNSGCEKCLKIATNYIPSCCSGKQGARVLIPSCNIRYELYPFYHELN----VPAPD 267

Query: 263 LLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKK-KYNAVPES 321
              P P G       KS  S   I+AIVAPI V  +L  L  C++  K K+ K+N+VP+ 
Sbjct: 268 EPRPNPQGK------KSRNSVVLIVAIVAPI-VIILLLTLFVCWIISKMKRIKFNSVPQE 320

Query: 322 NADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS 381
           + +  ++ +E LQFDF+TI  ATN FS DNKLGEGGFGEVYKG+L +GQEIAVKRLS++S
Sbjct: 321 SVE--ISRVEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSS 378

Query: 382 GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           GQG EEFKNEVVLVAKLQHRNLVR+LGFCL+GEEK+L+YEF
Sbjct: 379 GQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEF 419

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.556	0.363	0.472	6.6e-102
TAIR|locus:2115728	675	CRK25 "cysteine-rich RLK (RECE	0.542	0.351	0.491	2.3e-99
TAIR|locus:2121636	659	CRK7 "cysteine-rich RLK (RECEP	0.544	0.361	0.416	2.1e-88
TAIR|locus:2121626	830	CRK23 "cysteine-rich RLK (RECE	0.508	0.267	0.456	5.8e-87
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.546	0.353	0.414	6.6e-87
TAIR|locus:2121651	676	CRK8 "cysteine-rich RLK (RECEP	0.537	0.347	0.410	1e-86
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.544	0.368	0.415	1e-84
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.265	0.173	0.694	3.9e-76
TAIR|locus:2121691	667	CRK11 "cysteine-rich RLK (RECE	0.286	0.187	0.635	1.5e-75
TAIR|locus:2141762	665	CRK26 "cysteine-rich RLK (RECE	0.546	0.359	0.364	2.8e-72

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
 Identities = 119/252 (47%), Positives = 162/252 (64%)

Query:     3 PLKFFMFSLFLIYLLSFQFSFTV-AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPT 61
             P+  +  S F ++L SF  SF V A D  Y  H C  TAN+T NSTY  NL  LL+S+  
Sbjct:    10 PIMSYYSSFFFLFLFSFLTSFRVSAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL-- 67

Query:    62 NASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKET 121
              +SR   +S+GF NAT GQ P+RV GLF CRGD +T  C+ CV+FA  D L  CP  KE 
Sbjct:    68 -SSRNASYSTGFQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEA 126

Query:   122 ILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVTDQ--GRLNELVGTQMSQVVTQAVSN 179
              L+Y EC+LRYS+Q+I ST+ T+  V L+NT+NVT      L++LV   ++Q  T A+++
Sbjct:   127 TLYYDECVLRYSNQNILSTLITTGGVILVNTRNVTSNQLDLLSDLVLPTLNQAATVALNS 186

Query:   180 TKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSC 239
             +K+F TRK NFT  Q+ Y L QCTPDL+  DC+ CL+  + ++P+    + G R++ PSC
Sbjct:   187 SKKFGTRKNNFTALQSFYGLVQCTPDLTRQDCSRCLQLVINQIPT---DRIGARIINPSC 243

Query:   240 NVRYELYPFYNE 251
               RYE+Y FY E
Sbjct:   244 TSRYEIYAFYTE 255

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 621 (223.7 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
 Identities = 121/246 (49%), Positives = 158/246 (64%)

Query:    10 SLFLIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGF 69
             SLF ++L  F    TV  D  Y  H+C  T  ++RNS+Y  NL  +LSS+   +S    +
Sbjct:    10 SLFSVFL--FMILKTVTSDPTYLYHICPNTTTYSRNSSYLTNLRTVLSSL---SSPNAAY 64

Query:    70 SSGFFNATAGQ--DPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAE 127
             +S F NA AG+  D NRVYG+FLCRGD +   C+DCV FAA + LQ CP  K  ++WY E
Sbjct:    65 ASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVIWYDE 124

Query:   128 CLLRYSDQSIFSTMATSPTVSLLNTQNVTDQ--GRLNELVGTQMSQVVTQAVSNTKRFAT 185
             C++RYS+QSI   M   P V L N QN+T+    R NE +   +  V  +A  ++++FAT
Sbjct:   125 CMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFAT 184

Query:   186 RKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYEL 245
              KANFT FQT+YSL QCTPDL++ DC +CLR  +  LP CC    GGRV+ PSC+ RYEL
Sbjct:   185 EKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYEL 244

Query:   246 YPFYNE 251
             YPFYNE
Sbjct:   245 YPFYNE 250

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2121636 CRK7 "cysteine-rich RLK (RECEPTOR-like protein kinase) 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 502 (181.8 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
 Identities = 104/250 (41%), Positives = 147/250 (58%)

Query:     8 MFSLFLIYLLSFQFSFTV-AVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRG 66
             +F    ++L SF  SF   A D  +  + C     ++ NSTY  NL  LLSS+   +SR 
Sbjct:     4 LFPFIFLFLFSFLTSFRASAQDPRFLAYYCPNATTYSSNSTYLTNLKTLLSSL---SSRN 60

Query:    67 NGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYA 126
               +S+GF NAT GQ  +RV GLFLCRGD +   C++CVTFA  +    CP  +E + +Y 
Sbjct:    61 ASYSTGFQNATVGQALDRVTGLFLCRGDVSPEVCRNCVTFAVNNTFSRCPNQREAVFYYE 120

Query:   127 ECLLRYSDQSIFSTMATSPTVSLL-NTQNVTD-QGRLNE---LVGTQMSQVVTQAVSNTK 181
             EC+LRYS ++I ST  T+    +L N  +++  Q ++N+   LV + M+Q+  +A  N +
Sbjct:   121 ECILRYSHKNILSTAITNEGEFILRNPNHISPIQNQINQFTNLVLSNMNQIAIEAADNPR 180

Query:   182 RFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNV 241
             +F+T K   T  QT Y L QCTPDLS  +C  CL  ++ R+P     + G R  +PSCN 
Sbjct:   181 KFSTIKTELTALQTFYGLVQCTPDLSRQNCMNCLTSSINRMPF---SRIGARQFWPSCNS 237

Query:   242 RYELYPFYNE 251
             RYELY FYNE
Sbjct:   238 RYELYDFYNE 247

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 510 (184.6 bits), Expect = 5.8e-87, Sum P(2) = 5.8e-87
 Identities = 105/230 (45%), Positives = 148/230 (64%)

Query:    24 TVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPN 83
             T A+D  Y  HVC + A F R+STY  NL  LLS++   +S    +S+GF NATAG+ P+
Sbjct:   134 TSALDPTYVYHVCPSWATFPRSSTYMTNLITLLSTL---SSPSASYSTGFQNATAGKHPD 190

Query:    84 RVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSDQSIFSTMAT 143
             RV GLF CRGD +   C+ CV+FA  +    CP+ KE  L+Y +C LRYS+++I ST  T
Sbjct:   191 RVTGLFNCRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNT 250

Query:   144 SPTVSLLNTQNVT--DQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQ 201
             +  + L N+QN+T  +Q R  +LV T M+Q    A +++KRF  R ANFTT  +LY+L Q
Sbjct:   251 NGGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQ 310

Query:   202 CTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPFYNE 251
             CT DL+  DC +CL+  + +LP+    K GG+ + PSC+ R+EL  FYN+
Sbjct:   311 CTHDLTRQDCLSCLQQIINQLPT---EKIGGQFIVPSCSSRFELCLFYNQ 357

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 6.6e-87, Sum P(2) = 6.6e-87
 Identities = 107/258 (41%), Positives = 158/258 (61%)

Query:     4 LKFFMFSLFLIYLLSFQFSFT-VAVDRE---YATHVC-STTANFTRNSTYEKNLNLLLSS 58
             + FF    FL++L SF  S + ++   +   +  H C S+   ++RNSTY  NL  LLSS
Sbjct:     1 MSFFWLFPFLLHL-SFADSLSPLSAPVQNFIHLNHSCPSSILTYSRNSTYFTNLKTLLSS 59

Query:    59 IPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVS 118
             +   +SR   +S+GF  ATAGQ P+RV GLFLCRGD +   C++CV F+ ++ L  CP +
Sbjct:    60 L---SSRNASYSTGFQTATAGQAPDRVTGLFLCRGDVSQEVCRNCVAFSVKETLYWCPYN 116

Query:   119 KETILWYAECLLRYSDQSIFSTMATSPTVSLLNTQNVT--DQGRLNE---LVGTQMSQVV 173
             KE +L+Y EC+LRYS ++I ST+    +  LLN  N++  +Q +++E   LV + ++   
Sbjct:   117 KEVVLYYDECMLRYSHRNILSTVTYDGSAILLNGANISSSNQNQVDEFRDLVSSTLNLAA 176

Query:   174 TQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGR 233
              +A +++K+F TRK    T Q LY L QCTPDL+  DC  CL+ ++  +      + GGR
Sbjct:   177 VEAANSSKKFYTRKV--ITPQPLYLLVQCTPDLTRQDCLRCLQKSIKGMSLY---RIGGR 231

Query:   234 VLFPSCNVRYELYPFYNE 251
               +PSCN RYE Y FYNE
Sbjct:   232 FFYPSCNSRYENYSFYNE 249

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
 Identities = 101/246 (41%), Positives = 144/246 (58%)

Query:    11 LFLIYLLSFQFSFTVAVDRE-YATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGF 69
             +FL +L SF  SF  +     Y  H C     ++ NSTY  NL  LLSS    ASR   +
Sbjct:    19 IFL-FLFSFLTSFKASAQNPFYLNHDCPNRTTYSSNSTYSTNLKTLLSSF---ASRNASY 74

Query:    70 SSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECL 129
             S+GF N  AGQ P+RV GLFLCRGD +   C +CV F+  + L  CP  +E + +Y EC+
Sbjct:    75 STGFQNIRAGQTPDRVTGLFLCRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYEECI 134

Query:   130 LRYSDQSIFSTMATSPTVSLLNTQNVTD-QGRLNE---LVGTQMSQVVTQAVSNTKRFAT 185
             LRYS ++  ST+     + + N  N++  Q + ++   LV + M+Q   +A +++++F+T
Sbjct:   135 LRYSHKNFLSTVTYEGELIMRNPNNISSIQNQRDQFIDLVQSNMNQAANEAANSSRKFST 194

Query:   186 RKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYEL 245
              K   T+ QTLY L QCTPDL+  DC +CL  ++ R+      + G R  +PSCN RYEL
Sbjct:   195 IKTELTSLQTLYGLVQCTPDLARQDCFSCLTSSINRMMPLF--RIGARQFWPSCNSRYEL 252

Query:   246 YPFYNE 251
             Y FYNE
Sbjct:   253 YAFYNE 258

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
 Identities = 103/248 (41%), Positives = 144/248 (58%)

Query:     8 MFSLF-LIYLLSFQFSFTVAVDREYATHVCSTTANFTRNSTYEKNLNLLLSSIPT-NASR 65
             M SL   I+L  F      A +  Y  H CS T  F+ NSTY  NL  LLSS+ + NAS 
Sbjct:     1 MSSLISFIFLFLFSSITASAQNTFYLYHNCSVTTTFSSNSTYSTNLKTLLSSLSSLNAS- 59

Query:    66 GNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWY 125
                +S+GF  ATAGQ P+RV GLFLCR D ++  C+ CVTFA  + L  CP  KE + +Y
Sbjct:    60 --SYSTGFQTATAGQAPDRVTGLFLCRVDVSSEVCRSCVTFAVNETLTRCPKDKEGVFYY 117

Query:   126 AECLLRYSDQSIFSTMATSPTVSLLNTQNVTD--QGRLNELVGTQMSQVVTQAVSNTKRF 183
              +CLLRYS+++I +T+ T   + + + +N     Q +  +LV T M+    +A  + K++
Sbjct:   118 EQCLLRYSNRNIVATLNTDGGMFMQSARNPLSVKQDQFRDLVLTPMNLAAVEAARSFKKW 177

Query:   184 ATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRY 243
             A RK +    Q+LY + +CTPDL   DC  CL+  + ++      K GGR+L PSC  RY
Sbjct:   178 AVRKIDLNASQSLYGMVRCTPDLREQDCLDCLKIGINQVTY---DKIGGRILLPSCASRY 234

Query:   244 ELYPFYNE 251
             + Y FYNE
Sbjct:   235 DNYAFYNE 242

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 3.9e-76, Sum P(2) = 3.9e-76
 Identities = 82/118 (69%), Positives = 94/118 (79%)

Query:   310 KAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG 369
             + KK Y    E  A +++TT  SLQF F+TIE AT+KFS  N +G GGFGEVY+G L SG
Sbjct:   309 RRKKSYKTT-EVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSG 367

Query:   370 QEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK 427
              E+AVKRLSK SGQGAEEFKNE VLV+KLQH+NLVRLLGFCLEGEEKILVYEF + NK
Sbjct:   368 PEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEF-VPNK 424

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121691 CRK11 "cysteine-rich RLK (RECEPTOR-like protein kinase) 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
 Identities = 82/129 (63%), Positives = 101/129 (78%)

Query:   299 LFILGFCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGF 358
             L +LGF   RR+  K Y    ++ +++D++T +SL +DF+TIE ATNKFST NKLGEGGF
Sbjct:   305 LLVLGFVLFRRR--KSYQRT-KTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGF 361

Query:   359 GEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL 418
             G VYKG L +G ++AVKRLSK SGQG  EF+NE VLV KLQHRNLVRLLGFCLE EE+IL
Sbjct:   362 GAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQIL 421

Query:   419 VYEFTLKNK 427
             +YEF + NK
Sbjct:   422 IYEF-VHNK 429

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0016020 "membrane" evidence=ISS

GO:0009611 "response to wounding" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 2.8e-72, Sum P(2) = 2.8e-72
 Identities = 91/250 (36%), Positives = 140/250 (56%)

Query:     8 MFSLFL-IYLLSFQFS-FTVAVDREYATHVCST-TANFTRNSTYEKNLNLLLSSIPTNAS 64
             M SL L +  L FQ   FTV         +CS  T NFT N+ Y  NL+ L+SS+  ++ 
Sbjct:     1 MLSLLLPLISLLFQIQCFTVKSQPVPLNQICSNVTGNFTVNTPYAVNLDRLISSL--SSL 58

Query:    65 RGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAARDVLQLCPVSKETILW 124
             R N   +GF+N + G    +V  +  CRGD     C +C+  A + ++ LCPV KE I+W
Sbjct:    59 RRN--VNGFYNISVGDSDEKVNSISQCRGDVKLEVCINCIAMAGKRLVTLCPVQKEAIIW 116

Query:   125 YAECLLRYSDQSIFSTMATSPTVSLLNTQNVT-DQGRLNELVGTQMSQVVTQA--VSNTK 181
             Y +C  RYS+++IF+ +  SP  S+  T+N T D+    + +   +  +  +A  +  +K
Sbjct:   117 YDKCTFRYSNRTIFNRLEISPHTSITGTRNFTGDRDSWEKSLRGLLEGLKNRASVIGRSK 176

Query:   182 R-FATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCN 240
             + F   + +  +FQTL+ L QCTPD+S  DC+ CL   +A++PSCC  K G  V+ PSC 
Sbjct:   177 KNFVVGETSGPSFQTLFGLVQCTPDISEEDCSYCLSQGIAKIPSCCDMKMGSYVMSPSCM 236

Query:   241 VRYELYPFYN 250
             + Y  + FY+
Sbjct:   237 LAYAPWRFYD 246

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	437
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	2e-31
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	7e-25
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-13
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-11
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	9e-11
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-10
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-10
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-10
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-10
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	8e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-09
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-09
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-08
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-07
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	5e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	9e-06
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	1e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	5e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	8e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	9e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	6e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	7e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	0.001
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.001
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.001
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.001
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.001
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.002
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.002
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.002
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.002
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.003
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.003
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.003
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.003
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.003
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	0.004

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score =  115 bits (290), Expect = 2e-31
 Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 34  HVCSTTAN---FTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFL 90
           H+CS+  +    T NST+E NLN LLSS+ +NA+  +G   GF   T+G  P+ VYGL  
Sbjct: 2   HLCSSNTSGNYTTANSTFESNLNALLSSLSSNAASSSG--KGFAAGTSGAAPDTVYGLAQ 59

Query: 91  CRGDQTTSDCQDCVTFAARDVLQLCPVSKETILWYAECLLRYSD 134
           CRGD + SDC+ C+  A  ++ + CP  K   +WY  C LRY  
Sbjct: 60  CRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYES 103

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 97.9 bits (244), Expect = 7e-25
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 6/106 (5%)

Query: 144 SPTVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVS-NTKRFATRKANFTTFQTLYSLAQC 202
           S T     T N T +  LN L    +S + + A S + K FA    +     T+Y LAQC
Sbjct: 6   SNTSGNYTTANSTFESNLNAL----LSSLSSNAASSSGKGFAAG-TSGAAPDTVYGLAQC 60

Query: 203 TPDLSSSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPF 248
             DLS+SDC +CL  AV+ L  CC  K+GGR+ + SC +RYE YPF
Sbjct: 61  RGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 81.8 bits (203), Expect = 1e-17
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 6/79 (7%)

Query: 350 DNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNL 403
             KLGEG FGEVYKG L         E+AVK L + AS Q  EEF  E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 404 VRLLGFCLEGEEKILVYEF 422
           V+LLG C E E  ++V E+
Sbjct: 64  VKLLGVCTEEEPLMIVMEY 82

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 6/79 (7%)

Query: 350 DNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNL 403
             KLGEG FGEVYKG L         E+AVK L + AS Q  EEF  E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 404 VRLLGFCLEGEEKILVYEF 422
           V+LLG C E E   +V E+
Sbjct: 64  VKLLGVCTEEEPLYIVMEY 82

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.2 bits (191), Expect = 6e-16
 Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 352 KLGEGGFGEVYKGVL-----PSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           KLGEG FGEVYKG L      +  ++AVK L   AS +  EEF  E  ++ KL H N+VR
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 406 LLGFCLEGEEKILVYEF 422
           LLG C +GE   +V E+
Sbjct: 66  LLGVCTQGEPLYIVTEY 82

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           LGEGGFG VY      +G+++A+K + K  S    EE   E+ ++ KL H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 411 LEGEEKILVYEF 422
            +     LV E+
Sbjct: 61  EDENHLYLVMEY 72

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.8 bits (177), Expect = 4e-14
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 351 NKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVR 405
            KLGEG FGEVYKG L    G+    AVK L + AS +  ++F  E  ++ KL H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 406 LLGFCLEGEEKILVYEF 422
           LLG C E E   LV E+
Sbjct: 61  LLGVCTEEEPLYLVLEY 77

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 68.3 bits (168), Expect = 5e-13
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 347 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLV 404
           +    KLGEG FG+VY      +G+ +A+K + K   +   E    E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 405 RLLGFCLEGEEKILVYEF 422
           RL     + ++  LV E+
Sbjct: 61  RLYDVFEDEDKLYLVMEY 78

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 8/83 (9%)

Query: 353 LGEGGFGEVYKGVLPSGQE------IAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNLVR 405
           LGEG FG+V+ G     +       +AVK L + +   A + F+ E  L+   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 406 LLGFCLEGEEKILVYEFTLKNKD 428
             G C EG+  I+V+E+ +++ D
Sbjct: 73  FYGVCTEGDPPIMVFEY-MEHGD 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 7/77 (9%)

Query: 353 LGEGGFGEVYKG--VLPSGQE----IAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVR 405
           LGEG FG+VYKG    P+ +     +A+K L + A  +  +EF+ E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 406 LLGFCLEGEEKILVYEF 422
           LLG C + +   +++E+
Sbjct: 73  LLGVCTKEQPTCMLFEY 89

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 352 KLGEGGFGEVYKGVLPS-GQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLG 408
           KLG G FG VYK      G+ +AVK L K     +  +  + E+ ++ +L H N+VRL+ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 409 FCLEGEEKILVYEF 422
              + +   LV E+
Sbjct: 66  AFEDKDHLYLVMEY 79

Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 9e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 7/76 (9%)

Query: 353 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSKASGQGA-EEFKNEVVLVAKLQHRNLVRL 406
           LG G FG VYKGV +P G+     +A+K L + +   A +E  +E  ++A + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 407 LGFCLEGEEKILVYEF 422
           LG CL   +  L+ + 
Sbjct: 75  LGICL-SSQVQLITQL 89

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)

Query: 351 NKLGEGGFGEVYKGV--LPSGQEI--AVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVR 405
            +LG G FG V KGV  + SG+E+  AVK L +     G +EF  E  ++A+L H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 406 LLGFCLEGEEKILVYE 421
           L+G C  GE  +LV E
Sbjct: 61  LIGVCK-GEPLMLVME 75

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYK----GVLPSGQE---IAVKRLSK-ASGQGAEEFKNEV 392
           E   N       +G+G FG V++    G+LP  +    +AVK L + AS     +F+ E 
Sbjct: 1   EYPRNNIEYVRDIGQGAFGRVFQARAPGLLP-YEPFTMVAVKMLKEEASADMQADFQREA 59

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            L+A+  H N+V+LLG C  G+   L++E+
Sbjct: 60  ALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 25/79 (31%), Positives = 44/79 (55%)

Query: 347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           F+ + KLG G FGEV++G+  +   +A+K L        ++F+ EV  + +L+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 407 LGFCLEGEEKILVYEFTLK 425
              C  GE   ++ E   K
Sbjct: 68  FAVCSVGEPVYIITELMEK 86

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 353 LGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE 412
           +G+G FG+V  G    GQ++AVK L K     A+ F  E  ++  L+H NLV+LLG  L+
Sbjct: 14  IGKGEFGDVMLGDY-RGQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 413 GEEKILVYEFTLK 425
           G    +V E+  K
Sbjct: 72  GNPLYIVTEYMAK 84

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.5 bits (145), Expect = 5e-10
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 351 NKLGEGGFGEVYKGVLP-SGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
             LG G FG VY  +   +G+ +AVK   LS  S +  E  + E+ +++ LQH N+VR  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 408 GFCLEGEEKIL 418
           G   + E+  L
Sbjct: 66  GSERDEEKNTL 76

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 59.6 bits (144), Expect = 6e-10
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 352 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      +LP   +  +AVK L +AS    ++F+ E  L+  LQH+++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 406 LLGFCLEGEEKILVYEF 422
             G C EG   ++V+E+
Sbjct: 72  FYGVCTEGRPLLMVFEY 88

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQGAEEFKNEVV 393
           EV  +  +    LG G FGEVY+G+           ++AVK L    S Q   +F  E +
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VRL+G   E   + ++ E 
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLEL 90

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG G FGEV+ G      ++AVK L K      E F  E  ++ KL+H
Sbjct: 2   EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRH 60

Query: 401 RNLVRLLGFCLEGEEKILVYEFTLK 425
             LV+L   C E E   +V E+  K
Sbjct: 61  DKLVQLYAVCSEEEPIYIVTEYMSK 85

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS--KASGQGAEEFKNEVVLVAKLQHRN 402
            +   + +G G FG VYKG+ L +G  +A+K++S  K   +  +    E+ L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V+ +G     +   ++ E+
Sbjct: 61  IVKYIGSIETSDSLYIILEY 80

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 352 KLGEGGFGEVY----KGVLPSGQEI--AVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      + P   +I  AVK L  AS    ++F  E  L+  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 71

Query: 406 LLGFCLEGEEKILVYEFTLKNKD 428
             G C+EG+  I+V+E+ +K+ D
Sbjct: 72  FYGVCVEGDPLIMVFEY-MKHGD 93

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 14/91 (15%)

Query: 353 LGEGGFGEVYKGV-LPSGQEI----AVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVRL 406
           LG G FG VYKG+ +P G+ +    A+K L++ +G  A  EF +E +++A + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 407 LGFCLEGEEKIL--------VYEFTLKNKDN 429
           LG CL    +++        + ++  ++KDN
Sbjct: 75  LGVCLSPTIQLVTQLMPHGCLLDYVHEHKDN 105

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 8/77 (10%)

Query: 353 LGEGGFGEVYKG----VLPSG---QEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLV 404
           LG G FGEVY+G    +L  G     +AVK L K A+ Q  +EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 405 RLLGFCLEGEEKILVYE 421
           +LLG CL  E + ++ E
Sbjct: 63  KLLGVCLLNEPQYIIME 79

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 7/78 (8%)

Query: 353 LGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVR 405
           LG G FGEV+    KG+   G E  + VK L K   +  + EF+ E+ +  KL H+N+VR
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 406 LLGFCLEGEEKILVYEFT 423
           LLG C E E   ++ E+T
Sbjct: 73  LLGLCREAEPHYMILEYT 90

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
            F    K+G+GGFGEVYK     +G+E+A+K +   S +  E+  NE+ ++ K +H N+V
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 405 RLLGFCLEGEEKILVYEF 422
           +  G  L+ +E  +V EF
Sbjct: 61  KYYGSYLKKDELWIVMEF 78

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ 399
           E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  ++ +++
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 60

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H NLV+LLG C       ++ EF
Sbjct: 61  HPNLVQLLGVCTREPPFYIITEF 83

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 52.6 bits (126), Expect = 9e-08
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
           ++G G FG V+ G     +++A+K + + +    E+F  E  ++ KL H  LV+L G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 412 EGEEKILVYEF 422
           E     LV+EF
Sbjct: 70  ERSPICLVFEF 80

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 52.0 bits (124), Expect = 2e-07
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)

Query: 340 IEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLS-KASGQGAEEFKNEV 392
           I ++T +F  +  LGE  FG+VYKG L         Q +A+K L  KA G   EEFK+E 
Sbjct: 2   INLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEA 59

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ ++LQH N+V LLG   + +   +++ +
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  GEVYK     +G+E+A+K++ +   Q  E   NE++++   +H N+V      
Sbjct: 26  KIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSY 84

Query: 411 LEGEEKILVYEF 422
           L G+E  +V E+
Sbjct: 85  LVGDELWVVMEY 96

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
           KLG G FGEV++G+  +   +AVK L K      ++F  E  ++ KL+H  L++L   C 
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 412 EGEEKILVYE 421
             E   +V E
Sbjct: 72  LEEPIYIVTE 81

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 340 IEVATNKFSTDNKLGEGGFGEVYKGV--LPSGQEI--AVKRLSK-ASGQGAEEFKNEVVL 394
            E+     +    +GEG FG+VY+GV   P  ++I  AVK      S    E+F  E  +
Sbjct: 1   YEIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYI 60

Query: 395 VAKLQHRNLVRLLGFCLE 412
           + +  H ++V+L+G   E
Sbjct: 61  MRQFDHPHIVKLIGVITE 78

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+G+G FG+VYKGVL    E+AVK   S        +F  E  ++ +  H N+V+L+G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 411 LEGEEKILVYEF 422
           ++ +   +V E 
Sbjct: 62  VQKQPIYIVMEL 73

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 51.1 bits (122), Expect = 4e-07
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 14/102 (13%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G+++    A+K L +A+   A +E  +E  ++A + 
Sbjct: 8   EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 67

Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDNWIGQ 433
           + ++ RLLG CL    +++        + ++  ++KDN   Q
Sbjct: 68  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 109

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 352 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      + P+  +  +AVK L   +    ++F+ E  L+  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 406 LLGFCLEGEEKILVYEFTLKNKD 428
             G C +G+  I+V+E+ +K+ D
Sbjct: 72  FYGVCGDGDPLIMVFEY-MKHGD 93

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLS------KASGQGAEEFKNEVVLVAKLQHRNLV 404
             LG+G +G VY G+   GQ IAVK++        A+ +  E+ + EV L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 405 RLLGFCLEGEEKILVYEF 422
           + LG CL+     +  EF
Sbjct: 66  QYLGTCLDDNTISIFMEF 83

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 353 LGEGGFGEVYKGVL----PSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           LGEG FG V +G L     S  ++AVK  +L   +    EEF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 407 LGFCLEGEEK 416
           +G C E    
Sbjct: 67  IGVCFEASSL 76

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKAS----GQGA-EEFKNEVVLVAKLQHRNLVRL 406
           LG G FG VY+G+ L  G   AVK +S A     GQ A ++ + E+ L++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 407 LGFCLEGEEKILVYEF 422
           LG   E +   +  E 
Sbjct: 68  LGTEREEDNLYIFLEL 83

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGV---LPSGQ---EIAVKRLSKASGQGAE-EFKNEVV 393
           E+   K +   +LG+G FG VY+G+   +  G+    +A+K +++ +      EF NE  
Sbjct: 2   ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEAS 61

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ +    ++VRLLG    G+  ++V E 
Sbjct: 62  VMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 49.4 bits (116), Expect = 2e-06
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQH-R 401
            +    KLGEG FGEVY       + +A+K L+K      +  E F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 402 NLVRLLGFCLEGEEKILVYEF 422
           N+V+L  F  +     LV E+
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEY 79

Length = 384

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 341 EVATNKFSTDNKLGEGGFGEVY------------KGVLPSGQE-----IAVKRLSK-ASG 382
           E      +   KLGEG FGEV+            K    +        +AVK L   AS 
Sbjct: 1   EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60

Query: 383 QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT 423
              E+F  EV ++++L   N+ RLLG C       ++ E+ 
Sbjct: 61  NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYM 101

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 15/91 (16%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SKASGQGAEEFKNE 391
           D+  IE          K+GEG +G VYKG    +GQ +A+K++   S+  G  +   + E
Sbjct: 1   DYTKIE----------KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIR-E 49

Query: 392 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + L+ +LQH N+V L    ++     L++EF
Sbjct: 50  ISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)

Query: 352 KLGEGGFGEVYKG--VLPS---GQEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGE  FG++YKG   LP     Q +A+K L    + Q   EF+ E  L+A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 406 LLGFCLEGEEKILVYEF 422
           LLG   + +   +++E+
Sbjct: 72  LLGVVTQEQPVCMLFEY 88

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         KLG G FGEV+ G      ++A+K L + S    E F  E  L+ +LQH
Sbjct: 2   EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQH 60

Query: 401 RNLVRL 406
             LVRL
Sbjct: 61  PRLVRL 66

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 350 DNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLV 404
           +  +G G FGEV +G L  P  +EI  A+K L + +S +   +F  E  ++ +  H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 405 RLLGFCLEGEEKILVYEF 422
           RL G   +    +++ E+
Sbjct: 69  RLEGVVTKSRPVMIITEY 86

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 10/81 (12%)

Query: 351 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQGAE--EFKNEVVLVAKLQHRNL 403
            +LGEG FG+V           +G+++AVK L   SG+     +F+ E+ ++  L H N+
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 404 VRLLGFCLEGEEKI--LVYEF 422
           V+  G C +   +   L+ E+
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEY 89

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 7e-06
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 347 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFK----NEVVLVAKLQHR 401
           +    KLGEG +G VYK     +G+ +A+K++        E        E+ L+ +L+H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHP 58

Query: 402 NLVRLLGFCLEGEEKI-LVYEF 422
           N+V+LL      E K+ LV+E+
Sbjct: 59  NIVKLLDVIH-TERKLYLVFEY 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           K +    +GEG FG V +G   +GQ++AVK +       A+ F  E  ++ KL H+NLVR
Sbjct: 7   KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIK--CDVTAQAFLEETAVMTKLHHKNLVR 63

Query: 406 LLGFCL 411
           LLG  L
Sbjct: 64  LLGVIL 69

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 353 LGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE 412
           LG G FG V+ G      ++A+K + + +    ++F  E  ++ KL H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 413 GEEKILVYEF 422
                +V E+
Sbjct: 71  QRPIFIVTEY 80

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 8/78 (10%)

Query: 353 LGEGGFGEVYKG----VLPSGQ----EIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           LG+G F +++KG    V   G+    E+ +K L K+    +E F     ++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 405 RLLGFCLEGEEKILVYEF 422
              G C+ G+E I+V E+
Sbjct: 63  LNYGVCVCGDESIMVQEY 80

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+         KLG G FGEV+ G   +  ++AVK L K      + F  E  L+  LQH
Sbjct: 2   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 60

Query: 401 RNLVRLLGFCLEGEEKILVYEFTLK 425
             LVRL     + E   ++ E+  K
Sbjct: 61  DKLVRLYAVVTKEEPIYIITEYMAK 85

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 353 LGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVRLLGFCL 411
           LG+G FGEV+KG L     +AVK   +   Q  + +F +E  ++ +  H N+V+L+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 412 EGEEKILVYEF 422
           + +   +V E 
Sbjct: 63  QRQPIYIVMEL 73

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 352 KLGEGGFGEVYK-GVLPSGQEIAVKR--LSKASGQGAEEFKNEVVLVAKLQHRNLVRLLG 408
           ++GEG  G V+K     +G+ +A+K+  L +  G    +   E+  +   QH  +V+LL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 409 FCLEGEEKILVYEF 422
               G   +LV E+
Sbjct: 67  VFPHGSGFVLVMEY 80

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 17/104 (16%)

Query: 341 EVATNKFSTDNKLGEGGFGEV----------YKGVLPSGQE-----IAVKRL-SKASGQG 384
           E    +     KLGEG FGEV          + G      +     +AVK L +  +   
Sbjct: 1   EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA 60

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD 428
             +F  E+ ++++L++ N++RLLG C+  +   ++ E+ ++N D
Sbjct: 61  RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEY-MENGD 103

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 352 KLGEGGFGEVYKG--VLPSGQEI--AVKRLSKASGQGA-EEFKNEVVLVAKLQHRNLVRL 406
           KLG+G FG V +G      G+ I  AVK L         ++F  E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 407 LGFCLEGEEKILVYEF 422
            G  L      +V E 
Sbjct: 62  YGVVLTHPLM-MVTEL 76

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 351 NKLGEGGFGEVYKG-VLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGF 409
            K+GEG  G V       +G+++AVK++     Q  E   NEVV++   QH N+V +   
Sbjct: 25  VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSS 84

Query: 410 CLEGEEKILVYEF 422
            L G+E  +V EF
Sbjct: 85  YLVGDELWVVMEF 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+         KLG G FGEV+ G      ++AVK L K      E F  E  ++ KL+H
Sbjct: 2   EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRH 60

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
             LV+L  + +  EE I +V E+
Sbjct: 61  DKLVQL--YAVVSEEPIYIVTEY 81

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSK-ASGQGAEEFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++ AS +   EF NE  
Sbjct: 2   EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 61

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 62  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 93

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)

Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLL 407
           +G+G FG VY G L    GQ+I  AVK L++ +  +  E+F  E +++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 408 GFCLEGEEKILV 419
           G CL  E   LV
Sbjct: 63  GICLPSEGSPLV 74

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 351 NKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           NK+G G FG+VY  V L +G+ +AVK  R+     +  +E  +E+ ++  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 408 GFCLEGEEKILVYEF 422
           G  +  E+  +  E+
Sbjct: 66  GVEVHREKVYIFMEY 80

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 44.6 bits (106), Expect = 5e-05
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 345 NKFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSKASGQGAEEFKN----EVVLVAKLQ 399
           NK+     +GEG +G V K     +G+ +A+K+  K S +  E+ K     EV ++ +L+
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF-KES-EDDEDVKKTALREVKVLRQLR 58

Query: 400 HRNLVRLLGFCLEGEEKILVYEFTLKN 426
           H N+V L           LV+E+  + 
Sbjct: 59  HENIVNLKEAFRRKGRLYLVFEYVERT 85

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 353 LGEGGFGEVYKGVLPSGQEI---AVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           LGEG FG V +G L     I   AVK +  A  +    E+F +E V + +  H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 408 GFCLEGEEK 416
           G CL+  E 
Sbjct: 67  GVCLQTVES 75

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 353 LGEGGFGEVYKGVLPSGQ-EIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
           LG+G +G VY     S Q  IA+K + +   +  +    E+ L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 412 EG 413
           E 
Sbjct: 76  EN 77

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.5 bits (105), Expect = 5e-05
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 14/81 (17%)

Query: 353 LGEGGFGEV----YKGVLP----SGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNL 403
           LGEG FG+V    Y    P    +G+ +AVK L +  GQ     +K E+ ++  L H N+
Sbjct: 12  LGEGHFGKVSLYCYD---PANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 404 VRLLGFCLEGEEKI--LVYEF 422
           V+  G C E   K   L+ E+
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEY 89

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 44.1 bits (104), Expect = 6e-05
 Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           K++   K+G+G  G VY  + + +GQE+A+K+++       E   NE++++ + +H N+V
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIV 79

Query: 405 RLLGFCLEGEEKILVYEF 422
             L   L G+E  +V E+
Sbjct: 80  NYLDSYLVGDELWVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 347 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           F    KLGEG +G VYK +   +GQ +A+K +     +  +E   E+ ++ +     +V+
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62

Query: 406 LLGFCLEGEEKILVYEF 422
             G   +  +  +V E+
Sbjct: 63  YYGSYFKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 7/61 (11%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFK----NEVVLVAKLQHRNLVRL 406
           KLGEG FGEVYK   + +G+ +A+K++   + +  + F      E+ ++ KL+H N+V L
Sbjct: 15  KLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPL 72

Query: 407 L 407
           +
Sbjct: 73  I 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 351 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGF 409
            ++G G +G+VYK   + +G+ +A+K +    G   E  + E+ ++ + +H N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 410 CLEGEEKILVYEF 422
            L  ++  +V E+
Sbjct: 69  YLRRDKLWIVMEY 81

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 2   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 60

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
             LV+L  + +  EE I +V E+
Sbjct: 61  EKLVQL--YAVVSEEPIYIVTEY 81

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       D KLG+G FGEV+ G      ++A+K L K      E F  E  ++ KL+H
Sbjct: 2   EIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRH 60

Query: 401 RNLVRLLGFCLEGEEKI-LVYEFTLK 425
             LV L  + +  EE I +V EF  K
Sbjct: 61  DKLVPL--YAVVSEEPIYIVTEFMGK 84

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--EVVLVAKLQHRNLVRLLG 408
           K+GEG +G VYK     +G+ +A+K++               E+ L+ +L H N+++LL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 409 FCLEGEEKILVYEFTLKN 426
                 +  LV+EF   +
Sbjct: 66  VFRHKGDLYLVFEFMDTD 83

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKR-----LSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           LG+G FG VY    + +G+E+AVK+      S  + +     + E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 407 LGFCLEGEEKILVY 420
            G CL  +E + ++
Sbjct: 70  YG-CLRDDETLSIF 82

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRL---SKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           K+GEG +G V+K     + + +A+KR+       G  +   + E+ L+ +L+H+N+VRL 
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLY 65

Query: 408 GFCLEGEEKI-LVYEF 422
              L  ++K+ LV+E+
Sbjct: 66  D-VLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 352 KLGEGGFGEVYKGVLPSG---QEIAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           ++G G FG+V  G + SG    ++ VK L   AS Q   +F  E      LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 408 GFCLEGEEKILVYEF 422
           G C E    +LV EF
Sbjct: 62  GQCTEVTPYLLVMEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 87  LVGDELWVVMEF 98

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 351 NKLGEGGFGEVYKGVLPSGQEIA---VKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           +++G G FG+V  G    G   A   VK L + A+      F  EV    +L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 407 LGFCLEGEEKILVYEF 422
           LG C+E    +LV EF
Sbjct: 61  LGQCIESIPYLLVLEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG G FGEV+        ++AVK + K      E F  E  ++  LQH
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 60

Query: 401 RNLVRL 406
             LV+L
Sbjct: 61  DKLVKL 66

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 346 KFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSKASGQGA-EEFKNEVVLVAKL 398
                  LGEG FG+V K              +AVK L + +      +  +E  L+ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 399 QHRNLVRLLGFCLEGEEKILVYEF 422
            H ++++L G C +    +L+ E+
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEY 84

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 19/95 (20%)

Query: 352 KLGEGGFGEVYKGVLPSGQE-----------------IAVKRL-SKASGQGAEEFKNEVV 393
           KLGEG FGEV+   + + Q+                 +AVK L   A+     +F  EV 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD 428
           ++++L+  N++RLLG C++ +   ++ E+ ++N D
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEY-MENGD 105

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           K++   K+G+G  G V+  + + +GQE+A+K+++       E   NE++++ +L++ N+V
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIV 79

Query: 405 RLLGFCLEGEEKILVYEF 422
             L   L G+E  +V E+
Sbjct: 80  NFLDSFLVGDELFVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 3e-04
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 351 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEF----KNEVVLVAKLQHRNLVR 405
            ++GEG +G+VYK     +G+ +A+K++        E F      E+ L+ KL+H N+VR
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRME--NEKEGFPITAIREIKLLQKLRHPNIVR 62

Query: 406 LLGFCLEGEEK--ILVYEF 422
           L        +    +V+E+
Sbjct: 63  LKEIVTSKGKGSIYMVFEY 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 353 LGEGGFGEVYKGV-LPSGQEI----AVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG V+KG+ +P G  I    A+K +   SG Q  +E  + ++ +  L H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 407 LGFC 410
           LG C
Sbjct: 75  LGIC 78

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGV---LPSGQ---EIAVKRLSK-ASGQGAEEFKNEVV 393
           EV+  K +   +LG+G FG VY+G    +  G+    +AVK +++ AS +   EF NE  
Sbjct: 2   EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 61

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++      ++VRLLG   +G+  ++V E 
Sbjct: 62  VMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSKASG---QGAEEFKNEVVLV 395
           E+  +  +    +G G FGEV++G+L  P  +E+AV   +   G   +  ++F +E  ++
Sbjct: 1   EIHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +  H N++RL G   + +  +++ E+
Sbjct: 61  GQFSHHNIIRLEGVVTKFKPAMIITEY 87

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL-------SKASGQGAEEFKNEVVLV 395
              F  + K+G+G F  VYK + L  G+ +A+K++       +KA     ++   E+ L+
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKAR----QDCLKEIDLL 56

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYE 421
            +L H N+++ L   +E  E  +V E
Sbjct: 57  KQLDHPNVIKYLASFIENNELNIVLE 82

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--EVVLVAKLQ-HRNLVRLL 407
           +LG+G FG VY      +G+ +A+K++ K      EE  N  EV  + KL  H N+V+L 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 408 GFCLEGEEKILVYEF 422
               E +E   V+E+
Sbjct: 65  EVFRENDELYFVFEY 79

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           K++   K+G+G  G VY  + + +GQE+A+K+++       E   NE++++ + ++ N+V
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIV 79

Query: 405 RLLGFCLEGEEKILVYEF 422
             L   L G+E  +V E+
Sbjct: 80  NYLDSYLVGDELWVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 11/80 (13%)

Query: 353 LGEGGFGEVYKGVL---------PSGQEIAVKR-LSKASGQGAEEFKNEVVLVAKLQHRN 402
           LG+G F  +YKGVL           GQE++V   +  +  + +  F     L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           LV+L G C+  +E I+V E+
Sbjct: 63  LVKLYGVCVR-DENIMVEEY 81

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKR---LSKASGQGAEEFKNEVVLVAKLQHRN 402
           ++    K+GEG FG++Y     S  E  V +   L+K   +  E  K EV+L+AK++H N
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V       E     +V E+
Sbjct: 61  IVTFFASFQENGRLFIVMEY 80

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 351 NKLGEGGFGEVYKGV-LPSGQEIAVKR--LSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
            ++G+G FG+VY       G+   +K   LS  S +  E+  NEV ++ KL H N+++ 
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 346 KFSTDNKLGEGGFGEVYKGVL---PSGQEIAVKRL--SKASGQG-AEEFKNEVVLVAKLQ 399
           K+  +  +G G +G VYK        G+E A+K+    K    G ++    E+ L+ +L+
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 400 HRNLVRLLGFCLEGEEKI--LVYEFT 423
           H N+V L+   LE  +K   L++++ 
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYA 86

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 353 LGEGGFGEV----YKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           LG+G FG V    Y  +  + G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 408 GFC 410
           G C
Sbjct: 72  GVC 74

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
           +LG G FG V+ G   +  ++A+K +++ +    E+F  E  ++ KL H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 412 EGEEKILVYEF 422
           + +   +V EF
Sbjct: 70  QQKPLYIVTEF 80

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 353 LGEGGFGEVYKGVL--PSGQE--IAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           LG G FGE+ +G L  PS +E  +A+  L +  S +    F  E + + +  H N+VRL 
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72

Query: 408 GFCLEGEEKILVYEF 422
           G    G   ++V E+
Sbjct: 73  GVITRGNTMMIVTEY 87

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN-----EVVLVAKLQ 399
           ++    KLGEG +  VYK     +G+ +A+K++     + A++  N     E+ L+ +L+
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H N++ LL          LV+EF
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEF 83

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 347 FSTDNKLGEGGFGEVYKGVLPS-GQEIAVKR--LSKASGQGAEEFKNEVVLVAKLQHRNL 403
           F   NK+G+G FG V+K V  +  +  A+K+  LSK + +  EE  +E  ++AKL    +
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 404 VRLLGFCLEGEEKILVYEF 422
           +R     L+  +  +V E+
Sbjct: 62  IRYYESFLDKGKLNIVMEY 80

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           K++   K+G+G  G VY  + + +GQE+A+++++       E   NE++++ + ++ N+V
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80

Query: 405 RLLGFCLEGEEKILVYEF 422
             L   L G+E  +V E+
Sbjct: 81  NYLDSYLVGDELWVVMEY 98

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 352 KLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V       SG+++AVK +     Q  E   NEVV++   QH+N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 411 LEGEEKILVYEF 422
           L GEE  ++ EF
Sbjct: 88  LVGEELWVLMEF 99

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 352 KLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V       +G+++AVK++     Q  E   NEVV++    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 89  LVGDELWVVMEF 100

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 353 LGEGGFGEVYKGV-LPSGQEI----AVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG VYKG+ +P G+ +    A+K L +  S +  +E  +E  ++A +    + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 407 LGFCL 411
           LG CL
Sbjct: 75  LGICL 79

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 347 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNL 403
           F    K+GEG +G VYK     +G+ +A+K  RL   +         E+ L+ +L H N+
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61

Query: 404 VRLLGFCLEGEEKI-LVYEF 422
           V+LL   +  E K+ LV+EF
Sbjct: 62  VKLLD-VIHTENKLYLVFEF 80

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 352 KLGEGGFGEVYKGVL---PSGQEIAVKRLSKASGQGA--EEFKNEVVLVAKLQHRNLVRL 406
           +LG G FG V KG+     S + +AVK L   +   A  +E   E  ++ +L +  +VR+
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 407 LGFCLEGEEKILVYE 421
           +G C E E  +LV E
Sbjct: 62  IGIC-EAESWMLVME 75

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
           +LG G FG V  G      ++A+K + + S    +EF  E  ++ KL H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 412 EGEEKILVYEF 422
           +     +V E+
Sbjct: 70  KQRPIYIVTEY 80

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRL---SKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           K+GEG +G VYK     +G+ +A+K++   ++  G  +   + E+ L+ +L H N+VRLL
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIR-EISLLKELNHPNIVRLL 64

Query: 408 GFCLEGEEKILVYEF 422
                  +  LV+EF
Sbjct: 65  DVVHSENKLYLVFEF 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 347 FSTDNKLGEGGFGEVYK-GVLPSGQEIAVKR--LSKASGQGAEEFKNEVVLVAKLQHRNL 403
           F    KLG+G +G VYK   L   Q  A+K   L   S +  E+  NE+ ++A + H N+
Sbjct: 2   FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI 61

Query: 404 VRLLGFCLEGEEKILVYEF 422
           +      L+G +  +V E+
Sbjct: 62  ISYKEAFLDGNKLCIVMEY 80

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 343 ATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QH 400
            T  F     +GEG +G+VYK     +GQ +A+K +        EE K E  ++ K   H
Sbjct: 4   PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIM-DIIEDEEEEIKEEYNILRKYSNH 62

Query: 401 RNLVRLLG 408
            N+    G
Sbjct: 63  PNIATFYG 70

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 19/106 (17%)

Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVL----------PSGQE---IAVKRLSKASGQ 383
           E    + +   KLGEG FGEV+    +G+            SG +   +AVK L + + +
Sbjct: 1   EFPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK 60

Query: 384 GAE-EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD 428
            A  +F  E+ ++++L+  N++RLL  C+  +   ++ E+ ++N D
Sbjct: 61  NARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEY-MENGD 105

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQGAEEFKNEVV 393
           E+  ++ +    LGEG FG+V K              +AVK L   A+ +   +  +E+ 
Sbjct: 8   ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEME 67

Query: 394 LVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           ++  + +H+N++ LLG C +     +V E+
Sbjct: 68  MMKMIGKHKNIINLLGVCTQEGPLYVVVEY 97

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 353 LGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE 412
           +G+G FG+V  G    G ++AVK +   +   A+ F  E  ++ +L+H NLV+LLG  +E
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 413 GEEKI-LVYEFTLK 425
            +  + +V E+  K
Sbjct: 71  EKGGLYIVTEYMAK 84

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 352 KLGEGGFGEVYKGVL---PSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLVRLL 407
           ++G G FG+V    +        + VK L + AS +   EF  +      LQH N+++ L
Sbjct: 2   EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61

Query: 408 GFCLEGEEKILVYEF 422
           G C+E    +LV+E+
Sbjct: 62  GQCVEAIPYLLVFEY 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	437
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.92
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.82
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.7
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.57
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.55
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.54
KOG3653	534	consensus Transforming growth factor beta/activin	99.52
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.49
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.47
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.45
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.4
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.4
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.35
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.33
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.3
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.27
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.26
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.22
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.22
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.16
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.14
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.14
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.13
KOG0605	550	consensus NDR and related serine/threonine kinases	99.12
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.11
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.11
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.09
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.09
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.08
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.07
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.07
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.06
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.05
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.05
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.04
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.04
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.03
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.03
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.02
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.02
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.02
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.02
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.01
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.01
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.01
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.01
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.0
KOG0578	550	consensus p21-activated serine/threonine protein k	99.0
PHA02988	283	hypothetical protein; Provisional	99.0
KOG0610	459	consensus Putative serine/threonine protein kinase	99.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.99
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.98
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.98
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.98
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.98
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.98
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.97
KOG0586	596	consensus Serine/threonine protein kinase [General	98.96
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.96
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.95
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.94
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.93
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.93
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.93
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.93
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.92
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.91
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.91
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.91
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.9
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.9
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.9
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.9
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.9
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.9
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.9
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.89
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.89
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.89
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.89
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.89
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.89
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.89
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.89
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.88
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.88
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.88
KOG0198	313	consensus MEKK and related serine/threonine protei	98.88
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.88
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.88
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.88
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.87
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.86
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.86
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.86
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.86
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.86
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.86
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.86
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.86
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.85
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.85
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.85
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.84
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.84
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.84
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.84
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.84
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.84
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.84
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.84
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.84
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.83
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.83
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.83
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.83
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.83
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.82
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.82
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.82
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.82
PTZ00267	478	NIMA-related protein kinase; Provisional	98.82
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.82
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.81
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.81
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.81
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.81
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.81
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.81
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.8
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.8
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.8
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.8
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.8
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.8
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.8
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.79
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.79
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.79
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.79
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.78
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.78
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.78
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.78
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.78
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.78
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.78
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.78
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.78
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.77
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.77
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.77
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.77
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.77
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.77
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.77
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.77
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.77
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.77
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.76
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.76
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.76
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.76
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.76
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.76
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.76
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.76
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.76
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.76
PRK09188	365	serine/threonine protein kinase; Provisional	98.76
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.76
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.76
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.76
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.76
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.75
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.75
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.75
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.75
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.75
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.75
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.75
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.75
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.75
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.75
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.75
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.74
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.74
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.74
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.74
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.74
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.74
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.73
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.73
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.73
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.73
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.73
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.73
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.73
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.72
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.72
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.72
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.72
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.72
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.72
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.72
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.72
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.71
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.71
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.71
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.71
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.71
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.71
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.71
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.71
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.7
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.7
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.7
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.7
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.7
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.7
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.7
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.7
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.7
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.69
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.69
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.69
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.68
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.68
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.68
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.68
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.68
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.67
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.67
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.67
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.67
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.66
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.66
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.65
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.65
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.65
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.65
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.65
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.65
PLN00009	294	cyclin-dependent kinase A; Provisional	98.65
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.65
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.65
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.64
KOG0589	426	consensus Serine/threonine protein kinase [General	98.64
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.64
PHA03212	391	serine/threonine kinase US3; Provisional	98.64
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.64
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.64
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.64
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.63
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.63
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.63
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.63
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.63
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.62
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.62
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.62
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.61
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.61
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.61
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.61
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.61
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.6
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.59
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.59
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.59
PTZ00283	496	serine/threonine protein kinase; Provisional	98.59
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.58
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.57
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.57
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.56
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.56
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.56
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.56
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.55
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.55
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.54
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.54
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.54
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.54
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.54
PHA03211	461	serine/threonine kinase US3; Provisional	98.53
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.53
PTZ00036	440	glycogen synthase kinase; Provisional	98.52
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.52
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.52
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.52
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.51
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.51
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.5
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.5
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.5
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.49
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.49
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.49
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.49
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.48
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.48
PHA03209	357	serine/threonine kinase US3; Provisional	98.47
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.47
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.47
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.46
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.46
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.45
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.44
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.44
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.43
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.43
PRK10345	210	hypothetical protein; Provisional	98.43
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.42
PHA03207	392	serine/threonine kinase US3; Provisional	98.42
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.42
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.42
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.41
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.41
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.4
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.39
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.39
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.39
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.38
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.38
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.38
KOG1152	772	consensus Signal transduction serine/threonine kin	98.37
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.36
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.34
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.34
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.33
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.33
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.32
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.32
KOG0584	632	consensus Serine/threonine protein kinase [General	98.32
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.32
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.31
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.31
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.3
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.29
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.28
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.28
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.25
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.24
PHA03210	501	serine/threonine kinase US3; Provisional	98.23
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.23
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.22
PRK14879	211	serine/threonine protein kinase; Provisional	98.21
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.2
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.19
PTZ00284	467	protein kinase; Provisional	98.18
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.17
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.17
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.16
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.16
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.13
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.13
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.11
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.1
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.09
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.08
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.07
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.02
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.01
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.91
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.9
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.85
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.84
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.76
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.75
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.74
smart00090	237	RIO RIO-like kinase.	97.64
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.63
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.58
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.56
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.54
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.44
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.44
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.34
PHA02882	294	putative serine/threonine kinase; Provisional	97.33
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.33
PRK12274	218	serine/threonine protein kinase; Provisional	97.24
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.18
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.17
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.11
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.03
KOG1290	590	consensus Serine/threonine protein kinase [Signal	96.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	96.95
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.93
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.89
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.77
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.72
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	96.69
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.49
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	96.32
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.04
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.02
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	95.96
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	95.75
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.49
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.99
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.73
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	92.6
KOG1243	690	consensus Protein kinase [General function predict	92.22
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	92.2
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	91.35
PRK10593	297	hypothetical protein; Provisional	90.6
PLN02876	822	acyl-CoA dehydrogenase	88.94
PRK09550	401	mtnK methylthioribose kinase; Reviewed	88.11
KOG4258	1025	consensus Insulin/growth factor receptor (contains	87.66
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	87.49
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	87.14
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	85.92
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	85.75
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	85.33
COG0478	304	RIO-like serine/threonine protein kinase fused to	84.53
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	84.06
PF01636	239	APH: Phosphotransferase enzyme family This family	83.47
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	83.21
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	83.2
KOG1235	538	consensus Predicted unusual protein kinase [Genera	83.02
COG0661	517	AarF Predicted unusual protein kinase [General fun	81.75
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	81.08
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	80.59
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	80.43

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.92  E-value=3e-25  Score=177.11  Aligned_cols=103  Identities=45%  Similarity=0.857  Sum_probs=77.2

Q ss_pred             cccCC-C-CCcc-CCCChHHHHHHHHHHhcccccCCCCCCCCCceeeccCCCCCeEEEEEEccCCCCccchHHHHHHHHH
Q 013711           33 THVCS-T-TANF-TRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQDPNRVYGLFLCRGDQTTSDCQDCVTFAAR  109 (437)
Q Consensus        33 ~~~C~-~-~~~~-~~~~~f~~~l~~ll~~l~~~a~~~~~~~~~~~~~~~~~~~~~vygl~qC~~D~~~~~C~~Cl~~a~~  109 (437)
                      ++.|+ + .+++ +++++|+++|+.||..|++.++.++  +.+|+++..|.+++++||++||++|+++.+|..||+.|+.
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~--~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~   78 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSS--SKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVA   78 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT---TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHC
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhcc--ccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHH
Confidence            46798 3 3566 5777899999999999999875321  3579999888888999999999999999999999999999


Q ss_pred             HHhhhCCCCceeEEEccceEEEEecccc
Q 013711          110 DVLQLCPVSKETILWYAECLLRYSDQSI  137 (437)
Q Consensus       110 ~~~~~c~~~~~~~i~~~~C~~Ry~~~~f  137 (437)
                      +++.+|++++||+||+++|+||||+++|
T Consensus        79 ~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   79 NISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             CHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            9999999999999999999999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.82  E-value=2.3e-20  Score=148.88  Aligned_cols=92  Identities=48%  Similarity=0.850  Sum_probs=76.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcc-CccceeeeccccccceeeEEeeccCCCChhhHHHHHHHhhhccccccCCCCCceE
Q 013711          156 TDQGRLNELVGTQMSQVVTQAVSN-TKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSCCSGKQGGRV  234 (437)
Q Consensus       156 ~~~~~f~~~~~~l~~~l~~~a~~~-~~~~a~~~~~~~~~~~~y~laQC~~dl~~~~C~~Cl~~~~~~~~~~c~~~~~g~v  234 (437)
                      ++...|...+..+|..|+.+|+.. +.+|++++. ..+.++||||+||++||++.||..||+.++..++++|+++.||+|
T Consensus        14 ~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~-~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v   92 (106)
T PF01657_consen   14 TDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSA-GSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRV   92 (106)
T ss_dssp             -TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHhhccccCcEEeec-CCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEE
Confidence            444559999999999999999876 489999986 467889999999999999999999999999999999999999999


Q ss_pred             Eccccceeeecccc
Q 013711          235 LFPSCNVRYELYPF  248 (437)
Q Consensus       235 ~~~~C~~r~~~~~f  248 (437)
                      ++++|++||+.++|
T Consensus        93 ~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   93 WYDSCFLRYENYPF  106 (106)
T ss_dssp             EESSEEEEEESS--
T ss_pred             ECCCEEEEEECCCC
Confidence            99999999999987

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=5.3e-17  Score=157.51  Aligned_cols=101  Identities=51%  Similarity=0.865  Sum_probs=90.2

Q ss_pred             cccccchhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEE
Q 013711          331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC  410 (437)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  410 (437)
                      ....|+++++..+|++|...+.||+|+||.||+|.++++..||||++.....+..++|.+|+.++.+++|||||+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            34568999999999999999999999999999999988899999988765433156699999999999999999999999


Q ss_pred             EeCC-EeEEEEecccCCCccccc
Q 013711          411 LEGE-EKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       411 ~~~~-~~~lv~E~~~~~gsL~l~  432 (437)
                      .+.+ +.+|||||| ++|+|.-+
T Consensus       141 ~e~~~~~~LVYEym-~nGsL~d~  162 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYM-PNGSLEDH  162 (361)
T ss_pred             ecCCceEEEEEEcc-CCCCHHHH
Confidence            9988 599999999 99999544

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=3.8e-15  Score=151.32  Aligned_cols=93  Identities=34%  Similarity=0.623  Sum_probs=81.1

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeE
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGF  409 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~  409 (437)
                      ....+..+.++...+.||+|.||+||+|+..      +...||||.++..... ..++|++|+++|..|+|||||+|+|+
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            3445666778888899999999999999852      3467999999875544 67899999999999999999999999


Q ss_pred             EEeCCEeEEEEecccCCCccc
Q 013711          410 CLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       410 ~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      |.++++++||+||| .+|||.
T Consensus       558 C~~~~P~~MvFEYm-~~GDL~  577 (774)
T KOG1026|consen  558 CREGDPLCMVFEYM-DHGDLH  577 (774)
T ss_pred             EccCCeeEEEEEec-ccccHH
Confidence            99999999999999 999985

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.55  E-value=6.2e-15  Score=143.24  Aligned_cols=88  Identities=30%  Similarity=0.555  Sum_probs=79.0

Q ss_pred             HhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccC-HHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      +.+++.+.+.++||+|.||.|..+....+..||||.++...... ..+|.+|+++|.+++|||||+|+|+|..++++.+|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            44556677889999999999999999778999999998765444 58999999999999999999999999999999999


Q ss_pred             EecccCCCcc
Q 013711          420 YEFTLKNKDN  429 (437)
Q Consensus       420 ~E~~~~~gsL  429 (437)
                      +||| ++|+|
T Consensus       614 ~EYm-EnGDL  622 (807)
T KOG1094|consen  614 TEYM-ENGDL  622 (807)
T ss_pred             HHHH-hcCcH
Confidence            9999 99987

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.54  E-value=1.5e-14  Score=135.50  Aligned_cols=85  Identities=31%  Similarity=0.490  Sum_probs=75.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .+|...+.||+|.|+.||+|+.. ++..||||.+...  ..+..+.+..|+.+|++++|||||+|+.+++.++.++||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            46777788999999999999974 5799999999764  44456678999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      || .||+|-
T Consensus        90 yC-~gGDLs   97 (429)
T KOG0595|consen   90 YC-NGGDLS   97 (429)
T ss_pred             eC-CCCCHH
Confidence            99 999984

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.52  E-value=2.1e-14  Score=136.59  Aligned_cols=83  Identities=28%  Similarity=0.417  Sum_probs=69.6

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhc--CCCCCccceEeEEEeCC----EeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK--LQHRNLVRLLGFCLEGE----EKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~  417 (437)
                      ...+...+.||+|+||.||||.+ +++.||||+++.   ++.+.|.+|-.|...  ++|+||+++++.-....    +.+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            34566778999999999999999 679999999975   345678888777664  58999999999887766    899


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      ||+||. ++|+|.-
T Consensus       285 LVt~fh-~kGsL~d  297 (534)
T KOG3653|consen  285 LVTEFH-PKGSLCD  297 (534)
T ss_pred             EEeeec-cCCcHHH
Confidence            999999 9999864

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.49  E-value=2.8e-14  Score=142.96  Aligned_cols=87  Identities=23%  Similarity=0.427  Sum_probs=76.5

Q ss_pred             hcccccccCccccccceeEEEEEeC----CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..+.+.++++||.|.||.|++|.++    ....||||.|+... ++.+.+|+.|..||.++.||||++|.|+.....+++
T Consensus       627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM  706 (996)
T KOG0196|consen  627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM  706 (996)
T ss_pred             ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence            3455778899999999999999974    24689999998754 455679999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      ||.||| +||+|.
T Consensus       707 IiTEyM-ENGsLD  718 (996)
T KOG0196|consen  707 IITEYM-ENGSLD  718 (996)
T ss_pred             EEhhhh-hCCcHH
Confidence            999999 999985

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=8.8e-14  Score=131.51  Aligned_cols=82  Identities=22%  Similarity=0.427  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhc--CCCCCccceEeEEEeCC----EeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK--LQHRNLVRLLGFCLEGE----EKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~l  418 (437)
                      +.+.+.+.||+|.||.||+|.| .|+.||||++...   +.+.+.+|.+|...  |+|+||+.+++.....+    ++||
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             heeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            4577889999999999999999 7999999999653   44678888888876  49999999999876543    6999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      |.||+ ++||||=
T Consensus       287 vTdYH-e~GSL~D  298 (513)
T KOG2052|consen  287 VTDYH-EHGSLYD  298 (513)
T ss_pred             eeecc-cCCcHHH
Confidence            99999 9999974

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.45  E-value=5.8e-14  Score=136.02  Aligned_cols=94  Identities=29%  Similarity=0.465  Sum_probs=81.9

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .+.++...+.+...+.||+|.||.||.|.+.....||+|.++... ...++|.+|+.+|++|+|+|||+|+|+|..++++
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            445566666777889999999999999999777799999997653 3457899999999999999999999999999999


Q ss_pred             EEEEecccCCCccccc
Q 013711          417 ILVYEFTLKNKDNWIG  432 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l~  432 (437)
                      +|||||| ++|+|.-.
T Consensus       277 yIVtE~m-~~GsLl~y  291 (468)
T KOG0197|consen  277 YIVTEYM-PKGSLLDY  291 (468)
T ss_pred             EEEEEec-ccCcHHHH
Confidence            9999999 99998644

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.40  E-value=3e-13  Score=132.95  Aligned_cols=93  Identities=32%  Similarity=0.483  Sum_probs=78.5

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeCC--C---CEEEEEEccc---cCccCHHHHHHHHHHHhcCCCCCccceEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLPS--G---QEIAVKRLSK---ASGQGAEEFKNEVVLVAKLQHRNLVRLLG  408 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~--~---~~vAvK~l~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g  408 (437)
                      ...|+...+++...++||+|+||.||+|.+..  +   ..||||..+.   .......+|++|.++|++++|||||+++|
T Consensus       149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG  228 (474)
T KOG0194|consen  149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG  228 (474)
T ss_pred             ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            34556666777778999999999999999742  2   2389999875   23455689999999999999999999999


Q ss_pred             EEEeCCEeEEEEecccCCCccc
Q 013711          409 FCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       409 ~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ++...++++||||+| +||+|.
T Consensus       229 Va~~~~Pl~ivmEl~-~gGsL~  249 (474)
T KOG0194|consen  229 VAVLEEPLMLVMELC-NGGSLD  249 (474)
T ss_pred             EEcCCCccEEEEEec-CCCcHH
Confidence            999999999999999 999985

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.40  E-value=4.6e-13  Score=129.40  Aligned_cols=87  Identities=28%  Similarity=0.488  Sum_probs=72.5

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCcc--CHHHHHHHHHHHhcCCCCCccceEeEEEeCC-EeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ--GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~E  421 (437)
                      ..+...+.||+|+||.||+|.+.....||||++......  ..++|.+|+.+|.+++|||||+|+|+|.++. ...||||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            344556679999999999999944444999999754322  2568999999999999999999999999987 7999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      |+ ++|+|.-.
T Consensus       121 y~-~~GsL~~~  130 (362)
T KOG0192|consen  121 YM-PGGSLSVL  130 (362)
T ss_pred             eC-CCCcHHHH
Confidence            99 99998754

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.35  E-value=3.7e-12  Score=140.76  Aligned_cols=81  Identities=27%  Similarity=0.492  Sum_probs=68.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ..+...+.||+|+||.||+|.. .++..||||.++.....    ...|++++++++|||||+++|++.+.+..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            3466778999999999999986 57899999998653322    235688899999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|.
T Consensus       766 -~~g~L~  771 (968)
T PLN00113        766 -EGKNLS  771 (968)
T ss_pred             -CCCcHH
Confidence             999985

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=2.3e-12  Score=120.95  Aligned_cols=86  Identities=24%  Similarity=0.456  Sum_probs=73.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc-------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG-------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      +.|.+.+.||+|+||.|-++.- ++|+.||||++.....       .......+|+++|++|+|||||++.+++..++..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            4566788999999999999975 5799999999964211       1123467999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ||||||+ .||+||=
T Consensus       252 YmVlE~v-~GGeLfd  265 (475)
T KOG0615|consen  252 YMVLEYV-EGGELFD  265 (475)
T ss_pred             EEEEEEe-cCccHHH
Confidence            9999999 9999974

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.30  E-value=3.8e-12  Score=134.25  Aligned_cols=88  Identities=34%  Similarity=0.653  Sum_probs=76.6

Q ss_pred             hhcccccccCccccccceeEEEEEeCC--C----CEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPS--G----QEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~--~----~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      .....++..+.||+|.||.||+|.+.+  +    ..||||.+++. +.+...+|++|..+|++++|||||+++|+|.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            345667788999999999999999743  3    35899999764 4566788999999999999999999999999999


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..+|++||| .+|+|.
T Consensus       769 ~~~i~leyM-~gGDL~  783 (1025)
T KOG1095|consen  769 PPLILLEYM-EGGDLL  783 (1025)
T ss_pred             CcEEEehhc-ccCcHH
Confidence            999999999 999985

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.27  E-value=1.9e-12  Score=126.95  Aligned_cols=93  Identities=31%  Similarity=0.541  Sum_probs=82.8

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      .++.|+..+.++...++||-|.||.||.|.|+. ...||||.|++.. -..++|+.|..+|+.++|||+|+|+|+|..+.
T Consensus       258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep  336 (1157)
T KOG4278|consen  258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP  336 (1157)
T ss_pred             CcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence            346777777888889999999999999999964 6789999997643 45789999999999999999999999999999


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      +.|||+||| ..|.|+
T Consensus       337 PFYIiTEfM-~yGNLL  351 (1157)
T KOG4278|consen  337 PFYIITEFM-CYGNLL  351 (1157)
T ss_pred             CeEEEEecc-cCccHH
Confidence            999999999 988885

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.26  E-value=1.1e-11  Score=122.07  Aligned_cols=89  Identities=24%  Similarity=0.385  Sum_probs=78.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ..|...+.||+|+|+.+|.++. ..|+.+|+|++++.   .....+.+.+||++.++|+|||||++++++++.+++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4578889999999999999996 78999999999763   3345678999999999999999999999999999999999


Q ss_pred             ecccCCCccccccC
Q 013711          421 EFTLKNKDNWIGQD  434 (437)
Q Consensus       421 E~~~~~gsL~l~~~  434 (437)
                      |+| ++|+|.-++.
T Consensus        98 ELC-~~~sL~el~K  110 (592)
T KOG0575|consen   98 ELC-HRGSLMELLK  110 (592)
T ss_pred             Eec-CCccHHHHHH
Confidence            999 9999876643

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=1.6e-11  Score=118.23  Aligned_cols=80  Identities=26%  Similarity=0.460  Sum_probs=68.5

Q ss_pred             ccccccCccccccceeEEEEE-eCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  419 (437)
                      +.|+..++||+|.||.||+++ ..+|+.||+|.++...  .....-..+||.||++|+||||++|.+...+.  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            456777899999999999998 4679999999997543  33456678999999999999999999998876  689999


Q ss_pred             Eeccc
Q 013711          420 YEFTL  424 (437)
Q Consensus       420 ~E~~~  424 (437)
                      +|||+
T Consensus       197 FeYMd  201 (560)
T KOG0600|consen  197 FEYMD  201 (560)
T ss_pred             Eeccc
Confidence            99993

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=4.9e-12  Score=110.83  Aligned_cols=88  Identities=26%  Similarity=0.452  Sum_probs=76.3

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|++++.||+|.||.||.+..+ ++-.||+|++.+.   ..+-.+++.+|++|-..|+||||+++++++.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            457888999999999999999864 5678999998643   223456899999999999999999999999999999999


Q ss_pred             EecccCCCccccc
Q 013711          420 YEFTLKNKDNWIG  432 (437)
Q Consensus       420 ~E~~~~~gsL~l~  432 (437)
                      +||. ++|+||-.
T Consensus       101 lEya-~~gel~k~  112 (281)
T KOG0580|consen  101 LEYA-PRGELYKD  112 (281)
T ss_pred             EEec-CCchHHHH
Confidence            9999 99998743

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.16  E-value=4.3e-12  Score=128.13  Aligned_cols=82  Identities=37%  Similarity=0.576  Sum_probs=69.7

Q ss_pred             ccccCccccccceeEEEEEe-CCC----CEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSG----QEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~----~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +...++||+|+||.||||.| +.|    .+||+|.+... ..+..++++.|+.+|.+++||||++|+|+|.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            44568999999999999986 444    47899998653 4455689999999999999999999999998765 88999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      +|| |.|.|.
T Consensus       777 q~m-P~G~Ll  785 (1177)
T KOG1025|consen  777 QLM-PLGCLL  785 (1177)
T ss_pred             Hhc-ccchHH
Confidence            999 999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.14  E-value=1.4e-11  Score=111.51  Aligned_cols=86  Identities=26%  Similarity=0.368  Sum_probs=71.1

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cC-HHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QG-AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .|+...++|+|+||.|||++.+ +|+.||||++.+... .. .+--++|+++|++|+|+|||.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            3555678999999999999975 599999999965432 22 34578999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + .+--|..+
T Consensus        83 ~-dhTvL~eL   91 (396)
T KOG0593|consen   83 C-DHTVLHEL   91 (396)
T ss_pred             c-chHHHHHH
Confidence            9 66555444

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.14  E-value=7.8e-11  Score=115.91  Aligned_cols=88  Identities=28%  Similarity=0.572  Sum_probs=73.0

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCC---C--CEEEEEEccc-cCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPS---G--QEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~---~--~~vAvK~l~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      .+..++.+...+.||+|.||.||+|.+.+   |  ..||||..+. ....+.+.|+.|..+|++++|||||+|+|+|.+ 
T Consensus       384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-  462 (974)
T KOG4257|consen  384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-  462 (974)
T ss_pred             ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence            34455566778899999999999999632   3  3689999976 344557889999999999999999999999984 


Q ss_pred             CEeEEEEecccCCCcc
Q 013711          414 EEKILVYEFTLKNKDN  429 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL  429 (437)
                      .+.|||||++ +-|+|
T Consensus       463 ~P~WivmEL~-~~GEL  477 (974)
T KOG4257|consen  463 QPMWIVMELA-PLGEL  477 (974)
T ss_pred             cceeEEEecc-cchhH
Confidence            6789999999 98886

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.13  E-value=1e-10  Score=116.13  Aligned_cols=91  Identities=25%  Similarity=0.387  Sum_probs=76.1

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCC-CCCccceEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQ-HRNLVRLLGFC  410 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~  410 (437)
                      .+....+.|.+.+.||+|+||.||+|...      .+..||||.++.... ...+.+.+|+.++.++. ||||+++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            34556778888999999999999999852      134799999965332 33467999999999995 99999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+..+|||||+ ++|+|.
T Consensus       111 ~~~~~~~lv~Ey~-~~g~L~  129 (400)
T cd05105         111 TKSGPIYIITEYC-FYGDLV  129 (400)
T ss_pred             ccCCceEEEEEec-CCCcHH
Confidence            9999999999999 999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.12  E-value=1.2e-10  Score=113.08  Aligned_cols=90  Identities=23%  Similarity=0.305  Sum_probs=77.8

Q ss_pred             HhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      ....++|+...+||+|+||.||.++- .+|..+|+|+|++..   ....+.++.|-.+|....+|+||+|+..+.+.+++
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            34557789999999999999999985 469999999998643   34456788999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ||||||+ |||++.-
T Consensus       217 YLiMEyl-PGGD~mT  230 (550)
T KOG0605|consen  217 YLIMEYL-PGGDMMT  230 (550)
T ss_pred             EEEEEec-CCccHHH
Confidence            9999999 9998643

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.11  E-value=7e-11  Score=109.97  Aligned_cols=91  Identities=22%  Similarity=0.352  Sum_probs=78.6

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ..++|+..++||+|+||+|+.++- +.++..|+|.+++..   ....+....|..+|.+++||.||++.-.+.+++.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            346789999999999999999985 458899999997532   2345678899999999999999999999999999999


Q ss_pred             EEecccCCCccccccC
Q 013711          419 VYEFTLKNKDNWIGQD  434 (437)
Q Consensus       419 v~E~~~~~gsL~l~~~  434 (437)
                      |+||+ +||+|+...+
T Consensus       103 Vld~~-~GGeLf~hL~  117 (357)
T KOG0598|consen  103 VLDYL-NGGELFYHLQ  117 (357)
T ss_pred             EEecc-CCccHHHHHH
Confidence            99999 9999987643

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.11  E-value=3.5e-11  Score=117.18  Aligned_cols=84  Identities=27%  Similarity=0.463  Sum_probs=72.4

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|.+.+.||+|.||.||||+.+ +.+.||+|.+.+..  .++.+.+.+|++++++++|||||.++.++....++|+|+||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            5667788999999999999864 57899999997643  34567799999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + .| +|+-
T Consensus        83 a-~g-~L~~   89 (808)
T KOG0597|consen   83 A-VG-DLFT   89 (808)
T ss_pred             h-hh-hHHH
Confidence            9 54 8764

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.09  E-value=1e-10  Score=115.27  Aligned_cols=89  Identities=29%  Similarity=0.467  Sum_probs=74.8

Q ss_pred             HhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ....++|...+.||+|+||.||++..      ..+..||||+++... ....+.+.+|+.++..+ +||||+++++++..
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            44456788899999999999999973      235689999996432 23446789999999999 89999999999999


Q ss_pred             CCEeEEEEecccCCCccc
Q 013711          413 GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~  430 (437)
                      .+..++||||+ ++|+|+
T Consensus       111 ~~~~~lv~E~~-~~g~L~  127 (375)
T cd05104         111 GGPTLVITEYC-CYGDLL  127 (375)
T ss_pred             CCcceeeehhc-cCCcHH
Confidence            99999999999 999985

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.09  E-value=1.3e-10  Score=103.45  Aligned_cols=78  Identities=28%  Similarity=0.520  Sum_probs=67.5

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc--CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ--GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .|...+++|+|.||.||+|.. .+|+.||||.++.....  -.....+|++.|+.++|+||+.|++++...+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            456678999999999999984 57999999999764322  134678999999999999999999999999999999999


Q ss_pred             c
Q 013711          423 T  423 (437)
Q Consensus       423 ~  423 (437)
                      |
T Consensus        83 m   83 (318)
T KOG0659|consen   83 M   83 (318)
T ss_pred             c
Confidence            9

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.08  E-value=1.1e-10  Score=114.69  Aligned_cols=98  Identities=26%  Similarity=0.509  Sum_probs=83.4

Q ss_pred             cchhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      ...++|++..+.+.+.+.||+|.||+||+|.|. | .||||.+....  ....+.|.+|+.++++-+|.||+=++|+|..
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            344677788888889999999999999999993 3 59999997543  3456789999999999999999999999998


Q ss_pred             CCEeEEEEecccCCCccccccCCC
Q 013711          413 GEEKILVYEFTLKNKDNWIGQDVT  436 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l~~~~~  436 (437)
                      +.. .||+.++ +|-+||-..++.
T Consensus       460 p~~-AIiTqwC-eGsSLY~hlHv~  481 (678)
T KOG0193|consen  460 PPL-AIITQWC-EGSSLYTHLHVQ  481 (678)
T ss_pred             Cce-eeeehhc-cCchhhhhccch
Confidence            776 9999999 999999876554

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.07  E-value=2.5e-10  Score=106.84  Aligned_cols=87  Identities=25%  Similarity=0.441  Sum_probs=73.5

Q ss_pred             cccccccCccccccceeEEEEEeC----CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ..+|.+.+.||+|+||.||+|.+.    .+..||+|.++... ......|.+|+.++.+++||||+++++++..++..+|
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            346778899999999999999853    35689999987542 2234578999999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus        84 v~e~~-~~~~L~~   95 (266)
T cd05064          84 VTEYM-SNGALDS   95 (266)
T ss_pred             EEEeC-CCCcHHH
Confidence            99999 9998863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=5.8e-11  Score=111.34  Aligned_cols=86  Identities=20%  Similarity=0.453  Sum_probs=74.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ..|++.+.||+|.||+|-++.- ..|+.||||.+++.   +.++.-.+.+|++||..|+||||+.++.++...+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            3467778999999999999975 57999999999764   3344556889999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||. .+|+||=
T Consensus       133 EYa-S~GeLYD  142 (668)
T KOG0611|consen  133 EYA-SGGELYD  142 (668)
T ss_pred             Eec-CCccHHH
Confidence            999 9999973

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.06  E-value=8e-12  Score=111.95  Aligned_cols=85  Identities=28%  Similarity=0.475  Sum_probs=71.5

Q ss_pred             cccccccCccccccceeEEEEE-eCCCCEEEEEEccc--cCccCHHHHHHHHHHHhcCCCCCccceEe-EEEeCCE-eEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLG-FCLEGEE-KIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g-~~~~~~~-~~l  418 (437)
                      ..+|.+.++||+|.||.|||+. +.+|..+|.|.+.-  .+.+..+++..|+.+|++|+|||||++++ .+.+..+ ++|
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            3457788999999999999997 56899999999863  33455678999999999999999999998 4455555 899


Q ss_pred             EEecccCCCcc
Q 013711          419 VYEFTLKNKDN  429 (437)
Q Consensus       419 v~E~~~~~gsL  429 (437)
                      ||||+ .+|+|
T Consensus        98 vmE~c-~~GDL  107 (375)
T KOG0591|consen   98 VMELC-DAGDL  107 (375)
T ss_pred             HHHhh-cccCH
Confidence            99999 99987

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.05  E-value=2.9e-10  Score=112.77  Aligned_cols=91  Identities=26%  Similarity=0.440  Sum_probs=76.2

Q ss_pred             HHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCC-CCCccceEeEEE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCL  411 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~  411 (437)
                      ++.+.+++.+.++||+|+||.||++.+.      .+..||+|+++.... ...+.+.+|+.++.++. |||||++++++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            4556667888899999999999999863      246899999975432 22457899999999996 999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      .....++|+||+ ++|+|+-
T Consensus       112 ~~~~~~iv~E~~-~~g~L~~  130 (401)
T cd05107         112 KGGPIYIITEYC-RYGDLVD  130 (401)
T ss_pred             cCCCcEEEEecc-CCCcHHH
Confidence            999999999999 9999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.05  E-value=4.1e-10  Score=107.57  Aligned_cols=86  Identities=30%  Similarity=0.500  Sum_probs=72.0

Q ss_pred             cccccccCccccccceeEEEEEeCC-----------------CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-----------------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVR  405 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~  405 (437)
                      .++|...++||+|+||.||++.+++                 +..||+|.+.... .....+|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3467778899999999999997532                 3469999987542 233467999999999999999999


Q ss_pred             eEeEEEeCCEeEEEEecccCCCccc
Q 013711          406 LLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       406 l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +++++.+.+..+|||||+ ++|+|.
T Consensus        84 ~~~~~~~~~~~~lv~e~~-~~~~L~  107 (304)
T cd05096          84 LLGVCVDEDPLCMITEYM-ENGDLN  107 (304)
T ss_pred             EEEEEecCCceEEEEecC-CCCcHH
Confidence            999999999999999999 999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.04  E-value=7.7e-11  Score=117.35  Aligned_cols=89  Identities=30%  Similarity=0.445  Sum_probs=75.4

Q ss_pred             hcccccccCccccccceeEEEEEeCC--C--CEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS--G--QEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~--~--~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..+.+...++||+|.||.|++|.|..  |  ..||||.++..... ...+|++|+.+|-+|+|+|+++|+|+..+ ..+.
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m  186 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM  186 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence            34456677899999999999999843  4  36899999865443 56899999999999999999999999997 7889


Q ss_pred             EEEecccCCCcccccc
Q 013711          418 LVYEFTLKNKDNWIGQ  433 (437)
Q Consensus       418 lv~E~~~~~gsL~l~~  433 (437)
                      ||+|++ +.|||+-+.
T Consensus       187 MV~ELa-plGSLldrL  201 (1039)
T KOG0199|consen  187 MVFELA-PLGSLLDRL  201 (1039)
T ss_pred             HHhhhc-ccchHHHHH
Confidence            999999 999998663

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.04  E-value=4.7e-10  Score=109.46  Aligned_cols=88  Identities=28%  Similarity=0.438  Sum_probs=77.1

Q ss_pred             cccccccCccccccceeEEEEEeCC-CCEEEEEEccccCc---cCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l  418 (437)
                      ...|.+.+.||+|.||.||++..+. |+.+|+|.++....   ...+.+.+|+.+|+++. |||||.+.+.+......++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            3457778999999999999998654 99999999976433   24468999999999997 9999999999999999999


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      |||++ .||+||.+
T Consensus       114 vmEL~-~GGeLfd~  126 (382)
T KOG0032|consen  114 VMELC-EGGELFDR  126 (382)
T ss_pred             EEEec-CCchHHHH
Confidence            99999 99999865

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.03  E-value=5.3e-10  Score=110.46  Aligned_cols=84  Identities=23%  Similarity=0.270  Sum_probs=72.6

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .|...+.||+|+||.||++.. .+++.+|+|++....   ....+.+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            467788999999999999986 457899999996532   2334578999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|.
T Consensus        82 ~~-~gg~L~   89 (381)
T cd05626          82 YI-PGGDMM   89 (381)
T ss_pred             cC-CCCcHH
Confidence            99 999985

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.03  E-value=6.4e-10  Score=103.35  Aligned_cols=85  Identities=28%  Similarity=0.455  Sum_probs=73.8

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ++|...+.||+|+||.||++.+.++..+|+|.+... ....+++.+|+.++++++||||+++++++...+..++||||+ 
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~-   81 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM-   81 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC-
Confidence            346677889999999999999877788999988643 233567999999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++|+|.-
T Consensus        82 ~~~~L~~   88 (256)
T cd05114          82 ENGCLLN   88 (256)
T ss_pred             CCCcHHH
Confidence            9998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.02  E-value=3.9e-10  Score=104.99  Aligned_cols=89  Identities=27%  Similarity=0.514  Sum_probs=78.6

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .+..+|...++||+|+||.||++...++..+++|.+........+.+.+|+.+++.++|+||+++++++...+..++|||
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34556888899999999999999987789999999976655556789999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++++|.-
T Consensus        83 ~~-~~~~L~~   91 (261)
T cd05148          83 LM-EKGSLLA   91 (261)
T ss_pred             ec-ccCCHHH
Confidence            99 9988853

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.02  E-value=8.9e-10  Score=106.81  Aligned_cols=86  Identities=19%  Similarity=0.174  Sum_probs=74.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|+..++||+|+||.||++... ++..+|+|.+.... ....+.+.+|++++.+++|+||+++++++...+..+||||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            467888899999999999999875 57889999886532 2234578999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|.
T Consensus        84 ~~-~~~~L~   91 (333)
T cd06650          84 HM-DGGSLD   91 (333)
T ss_pred             cC-CCCcHH
Confidence            99 999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.02  E-value=2.7e-10  Score=110.59  Aligned_cols=89  Identities=26%  Similarity=0.444  Sum_probs=72.3

Q ss_pred             HhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ..+.++|.+.++||+|+||.||++..      ..+..||+|.++.... ...+.+.+|+.++.++ +||||+++++++..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            34556788889999999999999974      2346899999975332 2345789999999999 89999999998876


Q ss_pred             C-CEeEEEEecccCCCccc
Q 013711          413 G-EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~-~~~~lv~E~~~~~gsL~  430 (437)
                      . ...++||||+ ++|+|.
T Consensus        83 ~~~~~~lv~ey~-~~g~L~  100 (338)
T cd05102          83 PNGPLMVIVEFC-KYGNLS  100 (338)
T ss_pred             CCCceEEEEecC-CCCcHH
Confidence            4 4589999999 999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.02  E-value=8.1e-10  Score=103.41  Aligned_cols=91  Identities=23%  Similarity=0.268  Sum_probs=77.8

Q ss_pred             HHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++.+++++.....||+|+||.||+|... ++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            3445666666778999999999999864 577899999876555556789999999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      |+||+ ++++|.-
T Consensus        83 v~e~~-~~~~L~~   94 (268)
T cd06624          83 FMEQV-PGGSLSA   94 (268)
T ss_pred             EEecC-CCCCHHH
Confidence            99999 9998863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.01  E-value=3.9e-10  Score=105.20  Aligned_cols=81  Identities=40%  Similarity=0.652  Sum_probs=66.9

Q ss_pred             ccCccccccceeEEEEEeC-----CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          349 TDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..+.||+|.||.||+|.+.     .+..|+||.++... ....++|.+|++.+.+++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4578999999999999985     25689999996532 23467899999999999999999999999988889999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus        83 ~-~~g~L~   89 (259)
T PF07714_consen   83 C-PGGSLD   89 (259)
T ss_dssp             --TTEBHH
T ss_pred             c-cccccc
Confidence            9 999885

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.01  E-value=6.7e-10  Score=103.55  Aligned_cols=86  Identities=19%  Similarity=0.148  Sum_probs=73.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-EeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~E~  422 (437)
                      +++..+.||+|..|.|||+..+ +++.+|+|.+.... ....+++.+|++++++.+||+||+++|++..+. ++.|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            4555788999999999999874 58889999995433 344578999999999999999999999999988 59999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      | .+|||.-.
T Consensus       160 M-DgGSLd~~  168 (364)
T KOG0581|consen  160 M-DGGSLDDI  168 (364)
T ss_pred             c-CCCCHHHH
Confidence            9 99999654

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=8e-10  Score=109.04  Aligned_cols=85  Identities=26%  Similarity=0.267  Sum_probs=72.8

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++.. .+++.+|+|.+....   ....+.+.+|+.++.+++||||+++++++.+.+..+||||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            567788999999999999986 468899999985421   2234568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|+-
T Consensus        82 ~~-~gg~L~~   90 (377)
T cd05629          82 FL-PGGDLMT   90 (377)
T ss_pred             CC-CCCcHHH
Confidence            99 9999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.01  E-value=8.8e-10  Score=106.64  Aligned_cols=86  Identities=21%  Similarity=0.344  Sum_probs=74.1

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++.+++||||+++++.+..++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            46777889999999999999874 58899999986432   233467899999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++|+|+-
T Consensus        98 e~~-~~~~L~~  107 (329)
T PTZ00263         98 EFV-VGGELFT  107 (329)
T ss_pred             cCC-CCChHHH
Confidence            999 9999853

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.00  E-value=7e-10  Score=108.85  Aligned_cols=85  Identities=22%  Similarity=0.294  Sum_probs=73.1

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.||||++....   ......+.+|+.++..++|+||+++++.+..++..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            5777899999999999999864 58899999996432   2334568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|+-
T Consensus        82 ~~-~~g~L~~   90 (364)
T cd05599          82 YL-PGGDMMT   90 (364)
T ss_pred             CC-CCcHHHH
Confidence            99 9998853

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=2.6e-10  Score=111.54  Aligned_cols=85  Identities=29%  Similarity=0.495  Sum_probs=75.6

Q ss_pred             cccccccCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ...|..-++||+|.-|.||.+. ...++.||||++........+-+.+|+.+|+..+|+|||+++..+...+++|+||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            3456677899999999999997 456889999999876666667789999999999999999999999999999999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      | +||+|
T Consensus       352 m-~ggsL  357 (550)
T KOG0578|consen  352 M-EGGSL  357 (550)
T ss_pred             c-CCCch
Confidence            9 99986

>PHA02988 hypothetical protein; Provisional

Probab=99.00  E-value=1.2e-09  Score=103.30  Aligned_cols=80  Identities=16%  Similarity=0.315  Sum_probs=68.1

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCccC---HHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeEEEEecc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG---AEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVYEFT  423 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E~~  423 (437)
                      ..|++|+++.||+|.+ +|+.||||.++......   .+.|.+|+.+|.+++|||||+++|++.+    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5789999999999999 78999999997543333   4678899999999999999999999877    34689999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       ++|+|.-.
T Consensus       105 -~~g~L~~~  112 (283)
T PHA02988        105 -TRGYLREV  112 (283)
T ss_pred             -CCCcHHHH
Confidence             99988643

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.00  E-value=4e-10  Score=106.24  Aligned_cols=92  Identities=23%  Similarity=0.222  Sum_probs=78.8

Q ss_pred             cccccccCccccccceeEEEEEeCC-CCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .+.|...+.||.|.-|.||.+.+.+ +...|+|++.+..   .+.......|-+||+.++||.|+.|++.+...+..+|+
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            3456777899999999999999854 5889999997643   33345677899999999999999999999999999999


Q ss_pred             EecccCCCccccccCCC
Q 013711          420 YEFTLKNKDNWIGQDVT  436 (437)
Q Consensus       420 ~E~~~~~gsL~l~~~~~  436 (437)
                      |||| +||+|+.+++.+
T Consensus       156 meyC-pGGdL~~LrqkQ  171 (459)
T KOG0610|consen  156 MEYC-PGGDLHSLRQKQ  171 (459)
T ss_pred             EecC-CCccHHHHHhhC
Confidence            9999 999999987765

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=1.2e-09  Score=105.83  Aligned_cols=86  Identities=23%  Similarity=0.327  Sum_probs=73.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|.+.+.||+|+||.||++... +++.||+|+++...   ....+.+.+|+.++..++||||+++++++...+..+||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            5677889999999999999975 58899999986532   2234578899999999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      |+ ++|+|.-.
T Consensus        82 ~~-~g~~L~~~   91 (333)
T cd05600          82 YV-PGGDFRTL   91 (333)
T ss_pred             CC-CCCCHHHH
Confidence            99 99988643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.98  E-value=1.9e-10  Score=115.08  Aligned_cols=85  Identities=31%  Similarity=0.499  Sum_probs=71.4

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CEeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  418 (437)
                      +...+.||+|+||.||+|.. ..|+.||||.++.. .....+.+.+|+++|++|+|+|||++++.-.+.      ....+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            34567899999999999994 56999999999764 345667899999999999999999999876543      35789


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      ||||| .+|||+-.
T Consensus        95 vmEyC-~gGsL~~~  107 (732)
T KOG4250|consen   95 VMEYC-SGGSLRKV  107 (732)
T ss_pred             EEeec-CCCcHHHH
Confidence            99999 99999754

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.98  E-value=1e-09  Score=108.43  Aligned_cols=85  Identities=24%  Similarity=0.261  Sum_probs=72.7

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .|...++||+|+||.||++.. .+++.+|+|.+....   ....+.+.+|+.++++++|+||+++++.+.+.+..+||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            467788999999999999986 457899999986432   2234578899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|+-
T Consensus        82 ~~-~gg~L~~   90 (382)
T cd05625          82 YI-PGGDMMS   90 (382)
T ss_pred             CC-CCCcHHH
Confidence            99 9998853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.98  E-value=1e-09  Score=102.23  Aligned_cols=86  Identities=29%  Similarity=0.456  Sum_probs=75.4

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..++|...++||+|+||.||++...++..|++|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..++++||
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            345688889999999999999998788899999986533 3457899999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus        83 ~-~~~~L~   89 (261)
T cd05072          83 M-AKGSLL   89 (261)
T ss_pred             C-CCCcHH
Confidence            9 999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.98  E-value=2.1e-09  Score=100.43  Aligned_cols=86  Identities=23%  Similarity=0.385  Sum_probs=75.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|...+.||+|+||.||+|.. .+++.+|+|.+..........+.+|+.++.+++||||+++++.+..++..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            4678889999999999999986 468899999987554445567889999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        89 -~~~~L~~   95 (267)
T cd06646          89 -GGGSLQD   95 (267)
T ss_pred             -CCCcHHH
Confidence             9998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.98  E-value=1.6e-09  Score=104.99  Aligned_cols=86  Identities=19%  Similarity=0.144  Sum_probs=74.4

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|+..+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            456888899999999999999874 57889999986532 2234679999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|.
T Consensus        84 ~~-~~~~L~   91 (331)
T cd06649          84 HM-DGGSLD   91 (331)
T ss_pred             cC-CCCcHH
Confidence            99 999985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.97  E-value=1.2e-09  Score=106.69  Aligned_cols=86  Identities=20%  Similarity=0.264  Sum_probs=72.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...++||+|+||.||++... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            34556788999999999999864 689999999865322 2346789999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++|+|.-
T Consensus       154 ~-~~~~L~~  161 (353)
T PLN00034        154 M-DGGSLEG  161 (353)
T ss_pred             C-CCCcccc
Confidence            9 9998753

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.97  E-value=1.8e-09  Score=106.56  Aligned_cols=85  Identities=24%  Similarity=0.255  Sum_probs=73.1

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++.+++|+||+++++.+.+++..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            5777899999999999999863 58899999986422   2334668899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 ~~-~~g~L~~   90 (376)
T cd05598          82 YI-PGGDMMS   90 (376)
T ss_pred             CC-CCCcHHH
Confidence            99 9998863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=7.4e-10  Score=105.21  Aligned_cols=84  Identities=17%  Similarity=0.201  Sum_probs=72.3

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            5677889999999999999874 58899999986422   2234568899999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|+
T Consensus        82 ~~-~~~~L~   89 (291)
T cd05612          82 YV-PGGELF   89 (291)
T ss_pred             CC-CCCCHH
Confidence            99 999885

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.97  E-value=1.5e-09  Score=105.56  Aligned_cols=87  Identities=23%  Similarity=0.313  Sum_probs=73.1

Q ss_pred             cccccccCccccccceeEEEEEeCC--CCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS--GQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~--~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|...+.||+|+||.||++....  +..||+|.+...   .....+.+.+|+.++..++||||+++++++.+++..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3467778999999999999998643  368999998642   22345678899999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|+-
T Consensus       109 v~Ey~-~~g~L~~  120 (340)
T PTZ00426        109 VLEFV-IGGEFFT  120 (340)
T ss_pred             EEeCC-CCCcHHH
Confidence            99999 9998863

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.97  E-value=1.3e-09  Score=101.65  Aligned_cols=87  Identities=29%  Similarity=0.475  Sum_probs=76.0

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ..++.|...+.||+|++|.||++...++..||+|.++... ...+++.+|+.++++++|+||+++.+++...+..++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            3456688889999999999999998777889999986543 345779999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (261)
T cd05068          82 LM-KYGSLL   89 (261)
T ss_pred             cc-cCCcHH
Confidence            99 999885

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.97  E-value=6e-10  Score=109.76  Aligned_cols=91  Identities=27%  Similarity=0.473  Sum_probs=75.3

Q ss_pred             hHHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      .+....++|...+.||+|+||.||++..      .++..||+|.++... ....+.+.+|+.+++.+ +|+|||++++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~  111 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC  111 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence            3444556788899999999999999874      224579999997543 22345688999999999 899999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ......++||||+ ++|+|+
T Consensus       112 ~~~~~~~lv~ey~-~~g~L~  130 (374)
T cd05106         112 THGGPVLVITEYC-CYGDLL  130 (374)
T ss_pred             cCCCCeEEeHhhc-cCCcHH
Confidence            9999999999999 999986

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.96  E-value=1.6e-09  Score=107.01  Aligned_cols=87  Identities=22%  Similarity=0.347  Sum_probs=75.8

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ...|.+.+.||+|.|+.|..+.. ..+..||+|.+++...  ...+.+.+|+.+|..|.|||||+++.+...+..+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            45678889999999999999985 4689999999976432  33456899999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ .+|++|-
T Consensus       135 eya-~~ge~~~  144 (596)
T KOG0586|consen  135 EYA-SGGELFD  144 (596)
T ss_pred             Eec-cCchhHH
Confidence            999 9999874

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=1.6e-09  Score=105.62  Aligned_cols=89  Identities=25%  Similarity=0.428  Sum_probs=74.5

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEcccc----Cc-cCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA----SG-QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~  415 (437)
                      ....|...+.||+|.||.|+.+.. ..+..||+|++...    .. ...+.+.+|+.+++.++ ||||++++.+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            345788889999999999999975 46899999977653    11 22345678999999998 9999999999999999


Q ss_pred             eEEEEecccCCCccccc
Q 013711          416 KILVYEFTLKNKDNWIG  432 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~  432 (437)
                      .++||||+ .||+||-.
T Consensus        95 ~~ivmEy~-~gGdL~~~  110 (370)
T KOG0583|consen   95 IYIVMEYC-SGGDLFDY  110 (370)
T ss_pred             EEEEEEec-CCccHHHH
Confidence            99999999 99998743

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=1.6e-09  Score=103.13  Aligned_cols=90  Identities=17%  Similarity=0.271  Sum_probs=78.4

Q ss_pred             HhhcccccccCccccccceeEEEEE-eCCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ....+.|++.++||.|.-+.||++. .+.++.||||++..... .+...+.+|+..|+.++||||++.+..+..++++|+
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence            3445678889999999999999998 46789999999975433 346889999999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||.|| .+||++-
T Consensus       102 VmpfM-a~GS~ld  113 (516)
T KOG0582|consen  102 VMPFM-AGGSLLD  113 (516)
T ss_pred             eehhh-cCCcHHH
Confidence            99999 9999763

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.95  E-value=1.2e-09  Score=102.70  Aligned_cols=80  Identities=26%  Similarity=0.417  Sum_probs=66.2

Q ss_pred             ccccccceeEEEEEeCC-------------------------CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccce
Q 013711          352 KLGEGGFGEVYKGVLPS-------------------------GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRL  406 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~~-------------------------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l  406 (437)
                      +||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999997411                         13588998865443445678899999999999999999


Q ss_pred             EeEEEeCCEeEEEEecccCCCccccc
Q 013711          407 LGFCLEGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       407 ~g~~~~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      ++++.+....++||||+ ++|+|...
T Consensus        82 ~~~~~~~~~~~lv~ey~-~~g~L~~~  106 (274)
T cd05076          82 HGVCVRGSENIMVEEFV-EHGPLDVC  106 (274)
T ss_pred             EEEEEeCCceEEEEecC-CCCcHHHH
Confidence            99999999999999999 99987543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.94  E-value=1.7e-09  Score=106.39  Aligned_cols=89  Identities=25%  Similarity=0.216  Sum_probs=75.0

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ...++|...+.||+|+||.||++... ++..+|+|.+...   .......+.+|+.+++.++||||+++++++..+...+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            34567888899999999999999864 5889999998642   2233455789999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++|+|.-
T Consensus       120 lv~Ey~-~gg~L~~  132 (370)
T cd05596         120 MVMEYM-PGGDLVN  132 (370)
T ss_pred             EEEcCC-CCCcHHH
Confidence            999999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.94  E-value=2e-09  Score=105.71  Aligned_cols=86  Identities=22%  Similarity=0.252  Sum_probs=73.2

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|+..+.||+|+||.||++... +++.+|+|++....   ......+.+|+.++.+++|+||+++++.+.+....+||||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            5777889999999999999864 58899999996532   2234568889999999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      |+ ++|+|+-.
T Consensus        82 ~~-~gg~L~~~   91 (363)
T cd05628          82 FL-PGGDMMTL   91 (363)
T ss_pred             CC-CCCcHHHH
Confidence            99 99998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.94  E-value=4.2e-10  Score=109.79  Aligned_cols=82  Identities=23%  Similarity=0.434  Sum_probs=69.0

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++.+.+...+-||+|+-|.||.|++ .++.||||.+++..       ..+|+.|++|+|+||+.|.|+|....-.+||||
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            3333444567799999999999999 78899999886532       457889999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      || +.|-|+--
T Consensus       193 fC-a~GqL~~V  202 (904)
T KOG4721|consen  193 FC-AQGQLYEV  202 (904)
T ss_pred             cc-ccccHHHH
Confidence            99 99988743

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.93  E-value=3.1e-09  Score=101.78  Aligned_cols=86  Identities=19%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|...++||+|+||.||++... ++..+++|.+.... .....++.+|++++.+++||||+++++.+..++..++|+||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            5777889999999999999864 57889999886432 223456889999999999999999999999999999999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       ++++|.-.
T Consensus        82 -~~~~L~~~   89 (308)
T cd06615          82 -DGGSLDQV   89 (308)
T ss_pred             -CCCcHHHH
Confidence             99988533

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=1.8e-09  Score=101.68  Aligned_cols=87  Identities=24%  Similarity=0.346  Sum_probs=76.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|.+.+.||+|+||.||++... ++..+++|.+........+.+.+|+.++++++|+||+++++.+..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            456788889999999999999874 5789999998765555567899999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++++|.-
T Consensus        84 ~-~~~~L~~   91 (280)
T cd06611          84 C-DGGALDS   91 (280)
T ss_pred             c-CCCcHHH
Confidence            9 9988753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.93  E-value=3e-09  Score=99.01  Aligned_cols=87  Identities=31%  Similarity=0.533  Sum_probs=76.2

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ...++|.+.++||+|+||.||++...++..+++|.+.... ...+++.+|+.++++++|+||+++++.+......++|||
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            4456788899999999999999998778889999987533 345789999999999999999999999998889999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (261)
T cd05034          82 YM-SKGSLL   89 (261)
T ss_pred             cc-CCCCHH
Confidence            99 999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.93  E-value=2.3e-09  Score=105.52  Aligned_cols=90  Identities=22%  Similarity=0.211  Sum_probs=75.7

Q ss_pred             HhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      ....++|...+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++..++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            344567888899999999999999874 5789999998642   222345688999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|.-
T Consensus       119 ~lv~Ey~-~gg~L~~  132 (370)
T cd05621         119 YMVMEYM-PGGDLVN  132 (370)
T ss_pred             EEEEcCC-CCCcHHH
Confidence            9999999 9999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.93  E-value=2.7e-09  Score=102.31  Aligned_cols=88  Identities=24%  Similarity=0.360  Sum_probs=71.9

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--------------cCHHHHHHHHHHHhcCCCCCccce
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--------------QGAEEFKNEVVLVAKLQHRNLVRL  406 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l  406 (437)
                      ...+.|.+.+.||+|.||.|-++.. .+++.+|||++.+...              ...+...+||.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            3456788999999999999999985 4689999999964211              123578999999999999999999


Q ss_pred             EeEEEeC--CEeEEEEecccCCCccc
Q 013711          407 LGFCLEG--EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       407 ~g~~~~~--~~~~lv~E~~~~~gsL~  430 (437)
                      +.+..++  +.+|||+||| ..|.+.
T Consensus       174 iEvLDDP~s~~~YlVley~-s~G~v~  198 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYC-SKGEVK  198 (576)
T ss_pred             EEeecCcccCceEEEEEec-cCCccc
Confidence            9987664  5799999999 877753

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.93  E-value=9.2e-10  Score=99.58  Aligned_cols=89  Identities=26%  Similarity=0.309  Sum_probs=76.6

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|+..+.||.|+||.|...+.+ +|...|+|+++....   +..+...+|..+|+.+.||.++++.+.+.+...++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            45777889999999999999864 578899999976432   33456789999999999999999999999999999999


Q ss_pred             ecccCCCccccccC
Q 013711          421 EFTLKNKDNWIGQD  434 (437)
Q Consensus       421 E~~~~~gsL~l~~~  434 (437)
                      ||+ +||+||-+.+
T Consensus       124 eyv-~GGElFS~Lr  136 (355)
T KOG0616|consen  124 EYV-PGGELFSYLR  136 (355)
T ss_pred             ecc-CCccHHHHHH
Confidence            999 9999997743

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=3.1e-09  Score=102.95  Aligned_cols=85  Identities=24%  Similarity=0.263  Sum_probs=72.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|+.++..++|+||+++++++..++..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            5677889999999999999864 5889999998642   22334568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 ~~-~g~~L~~   90 (331)
T cd05597          82 YY-VGGDLLT   90 (331)
T ss_pred             cC-CCCcHHH
Confidence            99 9999853

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.93  E-value=2.6e-09  Score=99.35  Aligned_cols=84  Identities=29%  Similarity=0.455  Sum_probs=72.4

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ++|...+.||+|+||.||++...++..+|+|.+.... ...++|.+|+.++.+++||||+++++++...+..++||||+ 
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-   81 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM-   81 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC-
Confidence            3466778899999999999998777789999986432 34567999999999999999999999999888999999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++|+|.
T Consensus        82 ~~~~l~   87 (256)
T cd05113          82 SNGCLL   87 (256)
T ss_pred             CCCcHH
Confidence            888765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.92  E-value=3.2e-09  Score=102.44  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=68.4

Q ss_pred             CccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||++.. .+|..||+|.++..   .......+.+|+.+++.++||||+++.+.+...+..+|||||+ ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~-~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA-NG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCC-CC
Confidence            3689999999999986 46899999998653   2233456788999999999999999999999999999999999 99


Q ss_pred             Ccccc
Q 013711          427 KDNWI  431 (437)
Q Consensus       427 gsL~l  431 (437)
                      |+|+.
T Consensus        80 ~~L~~   84 (323)
T cd05595          80 GELFF   84 (323)
T ss_pred             CcHHH
Confidence            99864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.92  E-value=2.1e-09  Score=101.79  Aligned_cols=90  Identities=30%  Similarity=0.475  Sum_probs=74.0

Q ss_pred             HhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      +...++|.+.++||+|+||.||+|...      .+..||+|.+.... ......+.+|+.+++.++|+||+++++.+...
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            345667888999999999999999753      24579999886432 22334688999999999999999999999999


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      +..++||||+ ++|+|.-
T Consensus        82 ~~~~lv~e~~-~~g~L~~   98 (288)
T cd05061          82 QPTLVVMELM-AHGDLKS   98 (288)
T ss_pred             CCcEEEEeCC-CCCCHHH
Confidence            9999999999 9998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.91  E-value=3.9e-09  Score=97.55  Aligned_cols=80  Identities=30%  Similarity=0.512  Sum_probs=69.6

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCcc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      ++||+|+||.||++...++..+|+|.+..... .....+.+|+.++..++||||+++++.+...+..++||||+ ++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELV-PGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECC-CCCcH
Confidence            36899999999999987889999999875432 22346899999999999999999999999999999999999 99988


Q ss_pred             cc
Q 013711          430 WI  431 (437)
Q Consensus       430 ~l  431 (437)
                      .-
T Consensus        80 ~~   81 (250)
T cd05085          80 LS   81 (250)
T ss_pred             HH
Confidence            64

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.91  E-value=3.1e-09  Score=100.37  Aligned_cols=85  Identities=33%  Similarity=0.522  Sum_probs=71.9

Q ss_pred             ccccccCccccccceeEEEEEe-----CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      +.|+..+.||+|+||.||+|..     ..+..+++|.+.... ......+.+|+.++++++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4567788999999999999984     245789999997533 2334678999999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++++|.
T Consensus        85 v~e~~-~~~~L~   95 (283)
T cd05090          85 LFEYL-NQGDLH   95 (283)
T ss_pred             EEEcC-CCCcHH
Confidence            99999 988874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.91  E-value=3.7e-09  Score=101.97  Aligned_cols=81  Identities=21%  Similarity=0.231  Sum_probs=68.8

Q ss_pred             CccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||++.. .+|+.+|+|+++...   ......+.+|+.++++++||||+++.+.+...+..+|||||+ ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~-~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYA-NG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCC-CC
Confidence            3689999999999986 468899999986532   223456889999999999999999999999999999999999 99


Q ss_pred             Cccccc
Q 013711          427 KDNWIG  432 (437)
Q Consensus       427 gsL~l~  432 (437)
                      |+|+..
T Consensus        80 ~~L~~~   85 (323)
T cd05571          80 GELFFH   85 (323)
T ss_pred             CcHHHH
Confidence            998543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.91  E-value=1.3e-09  Score=100.14  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=65.5

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccC--HHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQG--AEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  418 (437)
                      .++|...+.|++|.||.||+|+. ++++.||+|+++......  .-.-++||.+|.+.+|||||.+..+....  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            35677889999999999999996 468899999997543221  12358999999999999999998887663  57999


Q ss_pred             EEecc
Q 013711          419 VYEFT  423 (437)
Q Consensus       419 v~E~~  423 (437)
                      |||||
T Consensus       155 VMe~~  159 (419)
T KOG0663|consen  155 VMEYV  159 (419)
T ss_pred             eHHHH
Confidence            99999

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.90  E-value=3.7e-09  Score=98.79  Aligned_cols=85  Identities=25%  Similarity=0.459  Sum_probs=72.4

Q ss_pred             ccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ++|+..+.||+|+||.||+|.+..    ...|++|.++... .....+|.+|+.++.+++|+||+++++.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            567888999999999999998742    4579999986543 23346789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++++|.
T Consensus        84 ~e~~-~~~~L~   93 (266)
T cd05033          84 TEYM-ENGSLD   93 (266)
T ss_pred             EEcC-CCCCHH
Confidence            9999 998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.90  E-value=5.5e-09  Score=98.50  Aligned_cols=86  Identities=17%  Similarity=0.204  Sum_probs=73.2

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|...++||+|+||.||++.. .+++.+|+|.+... .....+++.+|+.++.+++||||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            466778999999999999985 46889999998643 2233467899999999999999999999999999999999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       ++++|...
T Consensus        82 -~~~~l~~~   89 (279)
T cd06619          82 -DGGSLDVY   89 (279)
T ss_pred             -CCCChHHh
Confidence             99988643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.90  E-value=3.4e-09  Score=98.71  Aligned_cols=87  Identities=32%  Similarity=0.468  Sum_probs=73.9

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +..+.|...++||+|+||.||++...+++.+|+|.+.... ...+.+.+|+.++++++|+||+++.+.. ..+..++++|
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e   80 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE   80 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence            3456678889999999999999998888999999987533 3456899999999999999999999876 4567899999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++++|.-
T Consensus        81 ~~-~~~~L~~   89 (260)
T cd05067          81 YM-ENGSLVD   89 (260)
T ss_pred             cC-CCCCHHH
Confidence            99 9998863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=2.7e-09  Score=106.70  Aligned_cols=94  Identities=23%  Similarity=0.284  Sum_probs=79.9

Q ss_pred             HhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~  415 (437)
                      ....++|....+||+|+||+|+.+.++ +++..|||.+++.   ...+.+..+.|.+|+.-. +||.|++|++++...+.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            344567888999999999999999975 4789999999864   345567788999988877 69999999999999999


Q ss_pred             eEEEEecccCCCccccccCC
Q 013711          416 KILVYEFTLKNKDNWIGQDV  435 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~~~~  435 (437)
                      ++.||||+ .||+++..++.
T Consensus       444 l~fvmey~-~Ggdm~~~~~~  462 (694)
T KOG0694|consen  444 LFFVMEYV-AGGDLMHHIHT  462 (694)
T ss_pred             EEEEEEec-CCCcEEEEEec
Confidence            99999999 99997776653

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.90  E-value=3.9e-09  Score=99.92  Aligned_cols=83  Identities=29%  Similarity=0.348  Sum_probs=70.8

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |...+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++.+++|+||+++.+.+.+.+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            55678899999999999986 468999999986432   22234678999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus        82 ~-~~g~L~   88 (285)
T cd05631          82 M-NGGDLK   88 (285)
T ss_pred             c-CCCcHH
Confidence            9 999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.90  E-value=2.4e-09  Score=100.76  Aligned_cols=85  Identities=32%  Similarity=0.635  Sum_probs=72.9

Q ss_pred             ccccccCccccccceeEEEEEeCC------CCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|...+.||+|+||.||++...+      +..+|+|.++..... ..+.+.+|+.++.+++|+||+++++.+......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457778899999999999998632      478999998764433 3568999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +||||+ ++++|.
T Consensus        85 lv~e~~-~~~~L~   96 (280)
T cd05049          85 MVFEYM-EHGDLN   96 (280)
T ss_pred             EEEecC-CCCCHH
Confidence            999999 998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.90  E-value=3.8e-09  Score=99.75  Aligned_cols=86  Identities=27%  Similarity=0.460  Sum_probs=72.2

Q ss_pred             ccccccCccccccceeEEEEEeC-----CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  417 (437)
                      .++...+.||+|+||.||++...     ++..|++|.+........+.+.+|+.++.+++||||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            45677889999999999999742     4789999998765555567899999999999999999999987543  4689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +|+||+ ++|+|.-
T Consensus        84 lv~e~~-~~~~L~~   96 (284)
T cd05081          84 LVMEYL-PYGSLRD   96 (284)
T ss_pred             EEEEec-CCCCHHH
Confidence            999999 9999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.89  E-value=3.5e-09  Score=104.27  Aligned_cols=93  Identities=20%  Similarity=0.197  Sum_probs=77.6

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      .++....++|...+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|+.++..++||||+++++.+..+
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            344555678899999999999999999874 5789999998642   122345678999999999999999999999999


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      ...++||||+ ++|+|.-
T Consensus       116 ~~~~lv~Ey~-~gg~L~~  132 (371)
T cd05622         116 RYLYMVMEYM-PGGDLVN  132 (371)
T ss_pred             CEEEEEEcCC-CCCcHHH
Confidence            9999999999 9999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.89  E-value=4.3e-09  Score=101.79  Aligned_cols=81  Identities=22%  Similarity=0.242  Sum_probs=69.2

Q ss_pred             CccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||++.. .++..+|+|++...   .......+.+|+.+++.++||||+++.+.+...+..+|||||+ ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~-~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYV-NG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCC-CC
Confidence            3689999999999986 46899999999653   2233467889999999999999999999999999999999999 99


Q ss_pred             Cccccc
Q 013711          427 KDNWIG  432 (437)
Q Consensus       427 gsL~l~  432 (437)
                      |+|+..
T Consensus        80 g~L~~~   85 (328)
T cd05593          80 GELFFH   85 (328)
T ss_pred             CCHHHH
Confidence            998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=3.9e-09  Score=99.91  Aligned_cols=83  Identities=29%  Similarity=0.335  Sum_probs=70.5

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |+..++||+|+||.||++... +++.||+|.+.....   .....+.+|+.+++.++|+||+++.+.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            556788999999999999863 588999999864321   2234578899999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus        82 ~-~~~~L~   88 (285)
T cd05605          82 M-NGGDLK   88 (285)
T ss_pred             c-CCCcHH
Confidence            9 999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.89  E-value=2.7e-09  Score=100.36  Aligned_cols=88  Identities=30%  Similarity=0.539  Sum_probs=73.6

Q ss_pred             hhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      ...++|+..+.||+|+||.||++...      .+..+|+|.+.... .....++.+|+.+++.++|+||+++++++..+.
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34567888999999999999998752      24679999986432 233457899999999999999999999999889


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++|+||+ ++|+|.
T Consensus        83 ~~~lv~e~~-~~~~L~   97 (277)
T cd05062          83 PTLVIMELM-TRGDLK   97 (277)
T ss_pred             CeEEEEecC-CCCCHH
Confidence            999999999 999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.89  E-value=1.7e-09  Score=107.56  Aligned_cols=85  Identities=24%  Similarity=0.352  Sum_probs=74.4

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      -+++++.||+|+-|.|..++. .+|+.+|||++....   ......+.+|+.+|+-+.|||+++|+.++....++|||+|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            356788999999999999984 579999999997652   2234568999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+||-
T Consensus        93 yv-~gGELFd  101 (786)
T KOG0588|consen   93 YV-PGGELFD  101 (786)
T ss_pred             ec-CCchhHH
Confidence            99 9999984

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.89  E-value=4.4e-09  Score=101.86  Aligned_cols=85  Identities=20%  Similarity=0.194  Sum_probs=72.2

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+...   .......+.+|..++..++|+||+++.+++...+..+||||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            5777889999999999999864 5788999998642   12233458889999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 y~-~gg~L~~   90 (331)
T cd05624          82 YY-VGGDLLT   90 (331)
T ss_pred             CC-CCCcHHH
Confidence            99 9999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.89  E-value=3.1e-09  Score=100.50  Aligned_cols=86  Identities=22%  Similarity=0.307  Sum_probs=72.9

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|...+.||+|+||.||++... +++.+|+|++....  ....+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            5777889999999999999975 57889999986532  23346788999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + +++.|...
T Consensus        82 ~-~~~~l~~~   90 (287)
T cd07848          82 V-EKNMLELL   90 (287)
T ss_pred             C-CCCHHHHH
Confidence            9 88766544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.89  E-value=5e-09  Score=101.08  Aligned_cols=81  Identities=25%  Similarity=0.416  Sum_probs=68.2

Q ss_pred             CccccccceeEEEEEe----CCCCEEEEEEccccC----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          351 NKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.||+|+||.||++..    ..++.+|+|.++...    ......+.+|+.+++.++||||+++++.+..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999975    357899999986421    22335678999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + ++|+|+..
T Consensus        82 ~-~~~~L~~~   90 (323)
T cd05584          82 L-SGGELFMH   90 (323)
T ss_pred             C-CCchHHHH
Confidence            9 99998643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=4.5e-09  Score=100.90  Aligned_cols=78  Identities=23%  Similarity=0.249  Sum_probs=67.2

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++... +++.+|+|.+...   .......+.+|+.++.+++||||+++++.+...+..++||||+ ++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI-NGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC-CCCc
Confidence            699999999999864 5789999998643   2234467889999999999999999999999999999999999 9999


Q ss_pred             ccc
Q 013711          429 NWI  431 (437)
Q Consensus       429 L~l  431 (437)
                      |+-
T Consensus        80 L~~   82 (312)
T cd05585          80 LFH   82 (312)
T ss_pred             HHH
Confidence            853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.88  E-value=5.8e-09  Score=100.38  Aligned_cols=81  Identities=27%  Similarity=0.336  Sum_probs=68.1

Q ss_pred             CccccccceeEEEEEe----CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          351 NKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      +.||+|+||.||++..    ..|+.+|+|++....  ......+.+|+.++.+++||||+++++.+..++..++||||+ 
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~-   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL-   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC-
Confidence            5799999999999874    357899999996532  223456788999999999999999999999999999999999 


Q ss_pred             CCCccccc
Q 013711          425 KNKDNWIG  432 (437)
Q Consensus       425 ~~gsL~l~  432 (437)
                      ++|+|+-.
T Consensus        81 ~~~~L~~~   88 (318)
T cd05582          81 RGGDLFTR   88 (318)
T ss_pred             CCCcHHHH
Confidence            99998543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.88  E-value=1.2e-09  Score=91.79  Aligned_cols=78  Identities=29%  Similarity=0.497  Sum_probs=66.7

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++...++||+|.||+|||++. ..++.||+|+++..  ++.-...-++|+.+++.++|.|||+++.+...+..+-||+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            345568899999999999985 45889999998643  333456789999999999999999999999999999999999


Q ss_pred             c
Q 013711          423 T  423 (437)
Q Consensus       423 ~  423 (437)
                      +
T Consensus        83 c   83 (292)
T KOG0662|consen   83 C   83 (292)
T ss_pred             h
Confidence            9

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.88  E-value=4.7e-09  Score=98.31  Aligned_cols=79  Identities=34%  Similarity=0.463  Sum_probs=66.4

Q ss_pred             CccccccceeEEEEEeCC---CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~---~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||+|...+   +..+++|.++.... .....+.+|+.++++++||||+++++++.+....++||||+ ++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFC-PL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECC-CC
Confidence            358999999999998643   45789998865432 23357889999999999999999999999989999999999 99


Q ss_pred             Cccc
Q 013711          427 KDNW  430 (437)
Q Consensus       427 gsL~  430 (437)
                      |+|.
T Consensus        80 g~L~   83 (269)
T cd05087          80 GDLK   83 (269)
T ss_pred             CcHH
Confidence            9985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.88  E-value=3.5e-09  Score=99.73  Aligned_cols=85  Identities=26%  Similarity=0.439  Sum_probs=70.7

Q ss_pred             ccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC--EeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E  421 (437)
                      .++...+.||+|.||.||.+...+ |...|||.+...+....+.+.+|+.+|.+++|||||+.+|.....+  ...|.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            345667899999999999999744 8999999987643223677999999999999999999999855444  6999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|.
T Consensus        97 y~-~~GsL~  104 (313)
T KOG0198|consen   97 YA-PGGSLS  104 (313)
T ss_pred             cc-CCCcHH
Confidence            99 999985

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.88  E-value=8.3e-09  Score=96.29  Aligned_cols=84  Identities=32%  Similarity=0.551  Sum_probs=71.8

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      |...+.||+|+||.||++...+++.+|+|.+.....      ...+.+.+|+.++++++|+||+++++++.+....++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            566788999999999999987889999999864321      12346889999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus        82 e~~-~~~~L~~   91 (265)
T cd06631          82 EFV-PGGSISS   91 (265)
T ss_pred             ecC-CCCcHHH
Confidence            999 9988753

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.88  E-value=4.8e-09  Score=99.13  Aligned_cols=85  Identities=19%  Similarity=0.204  Sum_probs=73.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|+..+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|++++..++||||+++++.+...+..+||+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            45677789999999999999864 58899999886533 23356799999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        85 ~-~~~~L~   91 (284)
T cd06620          85 M-DCGSLD   91 (284)
T ss_pred             C-CCCCHH
Confidence            9 999885

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.88  E-value=4.5e-09  Score=97.58  Aligned_cols=85  Identities=33%  Similarity=0.526  Sum_probs=74.2

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .++|...+.||+|+||.||++.. .++.|++|.++.... ..+.+.+|+.++++++|+||+++++++......++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            34677789999999999999987 588999999976543 4678999999999999999999999999889999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        83 -~~~~L~~   89 (256)
T cd05039          83 -AKGSLVD   89 (256)
T ss_pred             -CCCcHHH
Confidence             8888753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.88  E-value=5.6e-09  Score=102.35  Aligned_cols=85  Identities=22%  Similarity=0.286  Sum_probs=72.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|+..+.||+|+||.||++... +++.+|+|.++...   ......+.+|+.++..++|+||+++++.+...+..+||||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            5677889999999999999864 58899999986422   2334578899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 ~~-~gg~L~~   90 (360)
T cd05627          82 FL-PGGDMMT   90 (360)
T ss_pred             CC-CCccHHH
Confidence            99 9998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.87  E-value=7.3e-09  Score=98.68  Aligned_cols=86  Identities=27%  Similarity=0.421  Sum_probs=75.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .+|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++.+..++..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5677788999999999999985 468999999997655455567899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        99 -~~~~L~~  105 (297)
T cd06656          99 -AGGSLTD  105 (297)
T ss_pred             -CCCCHHH
Confidence             9998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.87  E-value=3.3e-09  Score=100.89  Aligned_cols=86  Identities=29%  Similarity=0.505  Sum_probs=71.2

Q ss_pred             cccccccCccccccceeEEEEEeCC---------------CCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS---------------GQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLL  407 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~---------------~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~  407 (437)
                      .+.|.+.++||+|+||.||++....               ...||+|.++.. .....+.|.+|++++.+++|+||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            4567888999999999999987522               235899998653 223345799999999999999999999


Q ss_pred             eEEEeCCEeEEEEecccCCCccc
Q 013711          408 GFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       408 g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +++...+..++||||+ ++++|.
T Consensus        84 ~~~~~~~~~~lv~e~~-~~~~L~  105 (295)
T cd05097          84 GVCVSDDPLCMITEYM-ENGDLN  105 (295)
T ss_pred             EEEcCCCccEEEEecC-CCCcHH
Confidence            9999999999999999 998874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.86  E-value=5.5e-09  Score=97.72  Aligned_cols=85  Identities=24%  Similarity=0.427  Sum_probs=70.9

Q ss_pred             ccccccCccccccceeEEEEEeC-C---CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-S---GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~---~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .+|...+.||+|+||.||+|... +   +..+|+|.++... ....+.+.+|+.++.+++||||+++.+++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45677899999999999999863 2   3378999986532 23346789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++++|.
T Consensus        84 ~e~~-~~~~L~   93 (267)
T cd05066          84 TEYM-ENGSLD   93 (267)
T ss_pred             EEcC-CCCCHH
Confidence            9999 988874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.86  E-value=6.1e-09  Score=96.77  Aligned_cols=83  Identities=28%  Similarity=0.462  Sum_probs=72.2

Q ss_pred             cccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +|...+.||+|+||.||++...++..+++|.+.... .....+.+|+.+++.++|+||+++++++...+..++|+||+ +
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~-~   82 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM-A   82 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC-C
Confidence            466788999999999999998777789999986432 23467889999999999999999999999999999999999 9


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +++|+
T Consensus        83 ~~~L~   87 (256)
T cd05059          83 NGCLL   87 (256)
T ss_pred             CCCHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.86  E-value=6.3e-09  Score=98.73  Aligned_cols=86  Identities=26%  Similarity=0.379  Sum_probs=75.6

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+.|.+.++||+|+||.||++... ++..+++|.+........+.+.+|+.+++.++|+||+++++.+..+...++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            356778889999999999999874 4789999999766555567899999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        91 ~-~~~~l~   97 (292)
T cd06644          91 C-PGGAVD   97 (292)
T ss_pred             C-CCCcHH
Confidence            9 988875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.86  E-value=5.3e-09  Score=99.05  Aligned_cols=86  Identities=34%  Similarity=0.607  Sum_probs=73.7

Q ss_pred             cccccccCccccccceeEEEEEeC------CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..+|.+.+.||+|+||.||++...      ++..+++|.+........+.+.+|+.++.+++|+||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            456788899999999999999741      24568999987655455678999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +|+||+ ++++|.
T Consensus        84 lv~e~~-~~~~L~   95 (288)
T cd05093          84 MVFEYM-KHGDLN   95 (288)
T ss_pred             EEEEcC-CCCCHH
Confidence            999999 988874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.86  E-value=8.7e-09  Score=96.12  Aligned_cols=85  Identities=26%  Similarity=0.479  Sum_probs=73.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++... +++.+++|.++..   .....+.+.+|++++++++|+||+++++.+...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46778899999999999999975 6899999988632   2233567999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus        82 e~~-~~~~L~   90 (267)
T cd08224          82 ELA-DAGDLS   90 (267)
T ss_pred             ecC-CCCCHH
Confidence            999 999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.86  E-value=5.5e-09  Score=97.62  Aligned_cols=86  Identities=22%  Similarity=0.412  Sum_probs=74.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|...+.||+|+||.||++.. .+++.+++|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4567778999999999999986 458899999987654444566889999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        89 -~~~~L~~   95 (267)
T cd06645          89 -GGGSLQD   95 (267)
T ss_pred             -CCCcHHH
Confidence             9988863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.86  E-value=9.5e-09  Score=98.12  Aligned_cols=83  Identities=29%  Similarity=0.423  Sum_probs=70.4

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|+||.||++... +++.+|+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            56788899999999999999874 688999999865332 2334678999999999999999999999999999999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      + ++ +|
T Consensus        85 ~-~~-~l   89 (303)
T cd07869          85 V-HT-DL   89 (303)
T ss_pred             C-Cc-CH
Confidence            9 54 44

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.86  E-value=3.1e-09  Score=103.45  Aligned_cols=87  Identities=24%  Similarity=0.434  Sum_probs=71.1

Q ss_pred             hcccccccCccccccceeEEEEEe------CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEEEeC-
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG-  413 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-  413 (437)
                      +.++|.+.+.||+|+||.||++..      ..++.||||+++.... .....+.+|+.++.++ +|+||+++++++... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            456788899999999999999973      3467899999975332 2345688999999999 789999999988654 


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      ...+++|||+ ++|+|.
T Consensus        85 ~~~~lv~ey~-~~g~L~  100 (343)
T cd05103          85 GPLMVIVEFC-KFGNLS  100 (343)
T ss_pred             CceEEEEecc-CCCcHH
Confidence            5689999999 999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.86  E-value=8e-09  Score=95.77  Aligned_cols=83  Identities=31%  Similarity=0.503  Sum_probs=71.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC-----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      |...+.||+|+||.||+|... ++..+++|.+....     .+..+.+.+|+.++++++|+||+++.+++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            455688999999999999975 68899999986432     223467899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus        82 e~~-~~~~L~   90 (258)
T cd06632          82 ELV-PGGSLA   90 (258)
T ss_pred             Eec-CCCcHH
Confidence            999 998875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.85  E-value=1.2e-08  Score=95.30  Aligned_cols=85  Identities=25%  Similarity=0.453  Sum_probs=72.6

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++... +++.+|+|.+....   ......+.+|+.+++.++||||+++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            46778899999999999999864 68899999875422   223456899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus        82 e~~-~~~~L~   90 (267)
T cd08228          82 ELA-DAGDLS   90 (267)
T ss_pred             Eec-CCCcHH
Confidence            999 988885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.85  E-value=5.8e-09  Score=100.89  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=72.9

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.++...   ....+.+.+|+.++..++|+||+++.+++...+..+||||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            5777889999999999999864 68899999997532   2334568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 ~~-~~~~L~~   90 (330)
T cd05601          82 YQ-PGGDLLS   90 (330)
T ss_pred             CC-CCCCHHH
Confidence            99 9998864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=4.8e-09  Score=102.28  Aligned_cols=85  Identities=26%  Similarity=0.297  Sum_probs=73.3

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.||+|+++...   ......+.+|+.++..++|+||+++++.+.+++..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            5677889999999999999874 58999999986432   2345678999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 ~~-~~~~L~~   90 (350)
T cd05573          82 YM-PGGDLMN   90 (350)
T ss_pred             CC-CCCCHHH
Confidence            99 9998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.85  E-value=5.2e-09  Score=99.06  Aligned_cols=87  Identities=30%  Similarity=0.552  Sum_probs=73.3

Q ss_pred             hcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      ..++|...+.||+|+||.||++...      .+..+|+|.+.... ....+++.+|+.++++++||||+++++++...+.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            3456888899999999999999853      35789999986533 2334679999999999999999999999999899


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++++||+ ++|+|.
T Consensus        83 ~~lv~e~~-~~~~L~   96 (288)
T cd05050          83 MCLLFEYM-AYGDLN   96 (288)
T ss_pred             cEEEEecC-CCCCHH
Confidence            99999999 988874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.84  E-value=7.7e-09  Score=95.75  Aligned_cols=79  Identities=29%  Similarity=0.545  Sum_probs=68.0

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      +.||+|+||.||++... +++.+|+|.+.... ......+.+|++++++++||||+++++++......++|+||+ ++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV-QGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeec-cCCc
Confidence            46899999999999874 68899999876432 233467999999999999999999999999999999999999 9888


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |.
T Consensus        80 L~   81 (252)
T cd05084          80 FL   81 (252)
T ss_pred             HH
Confidence            76

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.84  E-value=7.3e-09  Score=96.69  Aligned_cols=85  Identities=28%  Similarity=0.461  Sum_probs=71.2

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ....|.+.++||+|+||.||++...+...|++|.++... ...+.+.+|+.++..++|+||+++++.+. .+..++||||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            345678889999999999999988666789999997532 34567999999999999999999998764 4568999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus        82 ~-~~~~L~   88 (262)
T cd05071          82 M-SKGSLL   88 (262)
T ss_pred             C-CCCcHH
Confidence            9 998874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.84  E-value=1.1e-08  Score=108.79  Aligned_cols=85  Identities=21%  Similarity=0.423  Sum_probs=73.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...++||+|+||.||++... .++.||+|++.....   ...+.|.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            35777889999999999999864 588999999865322   22457999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ +||+|.
T Consensus        82 EY~-eGGSL~   90 (932)
T PRK13184         82 PYI-EGYTLK   90 (932)
T ss_pred             EcC-CCCCHH
Confidence            999 999885

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.84  E-value=5.6e-09  Score=97.43  Aligned_cols=85  Identities=33%  Similarity=0.561  Sum_probs=73.3

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..+|...++||+|+||.||++... .+..+++|.+... ....+++.+|+.++..++|+||+++++++...+..+++|||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            345777889999999999999874 4789999998643 23456799999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        84 ~-~~~~L~   90 (263)
T cd05052          84 M-TYGNLL   90 (263)
T ss_pred             C-CCCcHH
Confidence            9 988874

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.84  E-value=1e-08  Score=97.12  Aligned_cols=84  Identities=26%  Similarity=0.372  Sum_probs=70.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...++||+|+||.||++... ++..||+|.++... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            45777889999999999999864 58899999986432 23345678999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++ +|.
T Consensus        85 ~-~~-~l~   90 (288)
T cd07871          85 L-DS-DLK   90 (288)
T ss_pred             C-Cc-CHH
Confidence            9 64 553

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.84  E-value=7.1e-09  Score=96.51  Aligned_cols=86  Identities=29%  Similarity=0.442  Sum_probs=72.2

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..++|.+.++||+|+||.||++...++..+++|.+.... ...+.+.+|+.++++++|+||+++++++. ....+++|||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY   81 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence            345677788999999999999998788889999986533 24567999999999999999999998774 5568999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++++|.-
T Consensus        82 ~-~~~~L~~   89 (260)
T cd05070          82 M-SKGSLLD   89 (260)
T ss_pred             c-CCCcHHH
Confidence            9 9888753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.84  E-value=8.7e-09  Score=99.81  Aligned_cols=85  Identities=21%  Similarity=0.231  Sum_probs=71.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...++||+|+||.||++... .++.+|+|.+...   .....+.+.+|+.++..++|+||+++.+++.+.+..+||||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            5677889999999999999875 4778999998642   12233458889999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|+-
T Consensus        82 y~-~~g~L~~   90 (332)
T cd05623          82 YY-VGGDLLT   90 (332)
T ss_pred             cc-CCCcHHH
Confidence            99 9999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.84  E-value=6.1e-09  Score=97.50  Aligned_cols=84  Identities=25%  Similarity=0.457  Sum_probs=71.0

Q ss_pred             cccccCccccccceeEEEEEeCC-C---CEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPS-G---QEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~-~---~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .+...+.||+|+||.||+|.... +   ..|++|.+... .....++|..|+.++++++||||+++.+++..++..++|+
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46678899999999999998643 2   36999998654 2334568999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus        85 e~~-~~~~L~   93 (269)
T cd05065          85 EFM-ENGALD   93 (269)
T ss_pred             ecC-CCCcHH
Confidence            999 888875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.84  E-value=8.7e-09  Score=99.51  Aligned_cols=81  Identities=21%  Similarity=0.232  Sum_probs=68.6

Q ss_pred             CccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.++..++||||+++.+++...+..+|||||+ ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~-~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA-NG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCC-CC
Confidence            3689999999999985 46889999999653   2233456788999999999999999999999999999999999 99


Q ss_pred             Cccccc
Q 013711          427 KDNWIG  432 (437)
Q Consensus       427 gsL~l~  432 (437)
                      |+|+..
T Consensus        80 ~~L~~~   85 (325)
T cd05594          80 GELFFH   85 (325)
T ss_pred             CcHHHH
Confidence            998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=1.5e-08  Score=94.25  Aligned_cols=87  Identities=22%  Similarity=0.407  Sum_probs=75.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|...+.||+|+||.||++... ++..+++|.+........+.+.+|+.++++++||||+++++.+...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            356778899999999999999864 5788999999765545667899999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++++|.-
T Consensus        82 ~-~~~~l~~   89 (262)
T cd06613          82 C-GGGSLQD   89 (262)
T ss_pred             C-CCCcHHH
Confidence            9 8888753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.83  E-value=8.8e-09  Score=99.41  Aligned_cols=85  Identities=25%  Similarity=0.331  Sum_probs=68.3

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHH---hcCCCCCccceEeEEEeCCEeEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLV---AKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      |.+.+.||+|+||.||++... +++.||||.++...   ....+.+.+|++++   ..++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            345678999999999999864 58899999996432   22345567776654   567899999999999999999999


Q ss_pred             EecccCCCccccc
Q 013711          420 YEFTLKNKDNWIG  432 (437)
Q Consensus       420 ~E~~~~~gsL~l~  432 (437)
                      |||+ ++|+|...
T Consensus        81 ~E~~-~~~~L~~~   92 (324)
T cd05589          81 MEYA-AGGDLMMH   92 (324)
T ss_pred             EcCC-CCCcHHHH
Confidence            9999 99998644

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.83  E-value=1.3e-08  Score=96.86  Aligned_cols=86  Identities=26%  Similarity=0.413  Sum_probs=75.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .+|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|+||+++++.+..+...++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            4577778899999999999985 468899999987655555677899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus       100 -~~~~L~~  106 (296)
T cd06654         100 -AGGSLTD  106 (296)
T ss_pred             -CCCCHHH
Confidence             9998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.83  E-value=1.2e-08  Score=98.84  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=67.9

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||++... +++.+|+|.++...   ....+.+..|..++..+ +||||+++++++...+..+|||||+ +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~-~   79 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV-S   79 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC-C
Confidence            46899999999999864 58899999997532   22345688999999988 7999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+.
T Consensus        80 ~g~L~~   85 (329)
T cd05588          80 GGDLMF   85 (329)
T ss_pred             CCCHHH
Confidence            999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.83  E-value=8.2e-09  Score=96.14  Aligned_cols=86  Identities=28%  Similarity=0.451  Sum_probs=73.1

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +..+.+...++||+|+||.||++....+..+++|.+.... ...+.+.+|+.++++++|+||+++.+.+.. ...+++||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence            3456788889999999999999998777889999886532 235678999999999999999999998877 77899999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        81 ~~-~~~~L~   88 (260)
T cd05073          81 FM-AKGSLL   88 (260)
T ss_pred             eC-CCCcHH
Confidence            99 988874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.83  E-value=1.3e-08  Score=95.83  Aligned_cols=84  Identities=20%  Similarity=0.422  Sum_probs=71.5

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      |...+.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++.+++|+||+++++.+..++..++|+||+ 
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-   84 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL-   84 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC-
Confidence            55678899999999999986 467899999986432 233467899999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++++|.-
T Consensus        85 ~~~~l~~   91 (277)
T cd06641          85 GGGSALD   91 (277)
T ss_pred             CCCcHHH
Confidence            8888763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.82  E-value=8.7e-09  Score=96.22  Aligned_cols=80  Identities=24%  Similarity=0.417  Sum_probs=66.3

Q ss_pred             CccccccceeEEEEEeCC-------------CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          351 NKLGEGGFGEVYKGVLPS-------------GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~-------------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.||+|+||.||+|.+..             ...|++|.+..........|.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998532             2358899886554444567889999999999999999999999988999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +|+||+ ++|+|..
T Consensus        81 lv~e~~-~~~~l~~   93 (262)
T cd05077          81 MVEEFV-EFGPLDL   93 (262)
T ss_pred             EEEecc-cCCCHHH
Confidence            999999 8887653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.82  E-value=5.7e-09  Score=98.62  Aligned_cols=84  Identities=18%  Similarity=0.274  Sum_probs=72.4

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|+..+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++|+||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            4667889999999999999875 6889999988643 2233467899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~l~   87 (286)
T cd06622          82 -DAGSLD   87 (286)
T ss_pred             -CCCCHH
Confidence             988875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.82  E-value=8.3e-09  Score=97.30  Aligned_cols=86  Identities=33%  Similarity=0.575  Sum_probs=73.8

Q ss_pred             cccccccCccccccceeEEEEEeC------CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+++...++||+|+||.||++...      ++..+++|.+........+.+.+|+.+++.++|+||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            356777889999999999999632      35678999987665555678999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +++||+ ++|+|.
T Consensus        84 lv~e~~-~~~~L~   95 (280)
T cd05092          84 MVFEYM-RHGDLN   95 (280)
T ss_pred             EEEecC-CCCCHH
Confidence            999999 988875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.82  E-value=9.7e-09  Score=96.87  Aligned_cols=84  Identities=26%  Similarity=0.384  Sum_probs=72.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      |+..+.||+|+||.||++... ++..+++|.+........+.+.+|+.+++.++|+||+++++.+...+..++|+||+ +
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~-~   85 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC-A   85 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec-C
Confidence            456678999999999999875 47788999987655455678999999999999999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +++|..
T Consensus        86 ~~~l~~   91 (282)
T cd06643          86 GGAVDA   91 (282)
T ss_pred             CCcHHH
Confidence            888753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.82  E-value=9.9e-09  Score=104.49  Aligned_cols=84  Identities=12%  Similarity=0.145  Sum_probs=71.8

Q ss_pred             cccccCccccccceeEEEEEeC-C-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-S-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .|...+.||+|+||.||++... + +..|++|.+..........+.+|+.+++.++|||||++++++...+..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3777889999999999999753 3 6788888775544444456888999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|.
T Consensus       148 -~gg~L~  153 (478)
T PTZ00267        148 -SGGDLN  153 (478)
T ss_pred             -CCCCHH
Confidence             999985

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.82  E-value=8.5e-09  Score=96.39  Aligned_cols=86  Identities=24%  Similarity=0.516  Sum_probs=72.2

Q ss_pred             cccccccCccccccceeEEEEEeCC-C---CEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-G---QEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|+..+.||+|+||.||++.... +   ..+++|.++... ....+++.+|++++++++|+||+++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            3467778899999999999998742 3   378999986542 2335679999999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++++|.
T Consensus        84 v~e~~-~~~~L~   94 (268)
T cd05063          84 ITEYM-ENGALD   94 (268)
T ss_pred             EEEcC-CCCCHH
Confidence            99999 998874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.81  E-value=8.3e-09  Score=98.54  Aligned_cols=88  Identities=28%  Similarity=0.471  Sum_probs=73.3

Q ss_pred             hhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG  413 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  413 (437)
                      ...++|...+.||+|+||.||++..      ..+..+|+|.++... ....+.+.+|+.+++++ +|+||+++++.+...
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            3445688899999999999999974      124579999987543 23345789999999999 799999999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..++++||+ ++|+|.
T Consensus       112 ~~~~lv~e~~-~~~~L~  127 (302)
T cd05055         112 GPILVITEYC-CYGDLL  127 (302)
T ss_pred             CceEEEEEcC-CCCcHH
Confidence            9999999999 999886

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.81  E-value=1.5e-08  Score=94.06  Aligned_cols=84  Identities=29%  Similarity=0.512  Sum_probs=72.8

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      .+|...+.||+|+||.||++.+.++..+++|.+.... ....+|.+|+.++++++||||+++++++......++|+||+ 
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~-   81 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM-   81 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC-
Confidence            3566778999999999999988778899999986432 33467999999999999999999999999999999999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++++|.
T Consensus        82 ~~~~L~   87 (256)
T cd05112          82 EHGCLS   87 (256)
T ss_pred             CCCcHH
Confidence            988875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.81  E-value=1.1e-08  Score=97.34  Aligned_cols=85  Identities=28%  Similarity=0.459  Sum_probs=74.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++||||+++++.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            5677788999999999999985 467899999986544445577899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        99 -~~~~L~  104 (293)
T cd06647          99 -AGGSLT  104 (293)
T ss_pred             -CCCcHH
Confidence             999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.81  E-value=7.9e-09  Score=97.25  Aligned_cols=88  Identities=30%  Similarity=0.544  Sum_probs=73.8

Q ss_pred             hcccccccCccccccceeEEEEEeCC------CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      .+++|.+.+.||+|+||.||++...+      +..|++|.+.... ......|.+|+.+++.++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34668888999999999999998743      5678999886433 2334579999999999999999999999999889


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++++|.-
T Consensus        84 ~~lv~e~~-~g~~L~~   98 (277)
T cd05036          84 RFILLELM-AGGDLKS   98 (277)
T ss_pred             cEEEEecC-CCCCHHH
Confidence            99999999 9998863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.81  E-value=9.2e-09  Score=96.55  Aligned_cols=85  Identities=34%  Similarity=0.554  Sum_probs=72.1

Q ss_pred             ccccccCccccccceeEEEEEeC------CCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|.....||+|+||.||++...      ....+++|.+...... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            56777889999999999999853      2467899988654333 3467999999999999999999999999888999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +||||+ ++|+|.
T Consensus        85 lv~e~~-~~~~L~   96 (275)
T cd05046          85 MILEYT-DLGDLK   96 (275)
T ss_pred             EEEEec-CCCcHH
Confidence            999999 999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.81  E-value=8.6e-09  Score=98.05  Aligned_cols=86  Identities=28%  Similarity=0.497  Sum_probs=71.7

Q ss_pred             cccccccCccccccceeEEEEEeC-----------------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-----------------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVR  405 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-----------------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~  405 (437)
                      .++|+..+.||+|+||.||++...                 ++..+|+|.+.... ....+++.+|+.++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            456888899999999999998532                 23468999987532 233467999999999999999999


Q ss_pred             eEeEEEeCCEeEEEEecccCCCccc
Q 013711          406 LLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       406 l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +++++...+..++||||+ ++|+|.
T Consensus        84 ~~~~~~~~~~~~lv~e~~-~~~~L~  107 (296)
T cd05095          84 LLAVCITSDPLCMITEYM-ENGDLN  107 (296)
T ss_pred             EEEEEecCCccEEEEEeC-CCCcHH
Confidence            999999999999999999 999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.81  E-value=1.4e-08  Score=95.60  Aligned_cols=85  Identities=21%  Similarity=0.437  Sum_probs=72.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .|+..+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|+.++++++|+||+++++.+.+....++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            3556788999999999999864 57899999986432 334567899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++|+|.-
T Consensus        85 -~~~~L~~   91 (277)
T cd06640          85 -GGGSALD   91 (277)
T ss_pred             -CCCcHHH
Confidence             9998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.81  E-value=1e-08  Score=96.82  Aligned_cols=94  Identities=24%  Similarity=0.427  Sum_probs=76.6

Q ss_pred             cchhhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      +.++.+..+.++|...+.||+|+||.||++... +++.+++|.+.... ....++.+|+.++.++ +|+||+++++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            445666677888999999999999999999864 57899999875422 2245688999999999 79999999998853


Q ss_pred             -----CCEeEEEEecccCCCccc
Q 013711          413 -----GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 -----~~~~~lv~E~~~~~gsL~  430 (437)
                           ++..++||||+ ++++|.
T Consensus        87 ~~~~~~~~~~lv~e~~-~~~~L~  108 (286)
T cd06638          87 KDVKNGDQLWLVLELC-NGGSVT  108 (286)
T ss_pred             cccCCCCeEEEEEeec-CCCCHH
Confidence                 45689999999 999885

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.80  E-value=1.3e-08  Score=95.23  Aligned_cols=79  Identities=30%  Similarity=0.436  Sum_probs=65.5

Q ss_pred             CccccccceeEEEEEeCC---CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          351 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~---~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +.||+|+||.||+|...+   ...+++|.+..... .....+.+|+.+++.++|+||+++++.+......++||||+ ++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~-~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFC-PL   79 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeC-CC
Confidence            358999999999997533   34688888764332 23456889999999999999999999999999999999999 99


Q ss_pred             Cccc
Q 013711          427 KDNW  430 (437)
Q Consensus       427 gsL~  430 (437)
                      |+|.
T Consensus        80 g~L~   83 (269)
T cd05042          80 GDLK   83 (269)
T ss_pred             CcHH
Confidence            9985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.80  E-value=1.4e-08  Score=94.13  Aligned_cols=83  Identities=29%  Similarity=0.417  Sum_probs=71.9

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|++|.||++... ++..+++|.+...  .....+++.+|++++++++||||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            566788999999999999874 5889999998642  2344567999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (256)
T cd08529          82 -ENGDLH   87 (256)
T ss_pred             -CCCcHH
Confidence             998875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.80  E-value=1.5e-10  Score=101.83  Aligned_cols=87  Identities=26%  Similarity=0.434  Sum_probs=75.3

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccc--cCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++.|++.++||+|.|+.||++.. +.|+..|+|++..  -+..+.+++.+|++|.+.|+|||||+|.....+....+||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            35677788999999999999864 5688899988853  23456788999999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      |+| .|++|+.
T Consensus        90 e~m-~G~dl~~   99 (355)
T KOG0033|consen   90 DLV-TGGELFE   99 (355)
T ss_pred             ecc-cchHHHH
Confidence            999 9999874

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.80  E-value=1.5e-08  Score=93.91  Aligned_cols=84  Identities=24%  Similarity=0.423  Sum_probs=73.9

Q ss_pred             cccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|+..++||+|+||.||++.... +..+++|.+.....  .+++.+|++++++++|+||+++++.+......++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3567888999999999999999754 78999999865432  67899999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        80 ~-~~~~L~   86 (256)
T cd06612          80 C-GAGSVS   86 (256)
T ss_pred             C-CCCcHH
Confidence            9 888875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.80  E-value=9.5e-09  Score=98.31  Aligned_cols=89  Identities=24%  Similarity=0.442  Sum_probs=73.4

Q ss_pred             HhhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      +...++|.+.+.||+|+||.||++...        ....+|+|.+.... ....+++.+|+.++.++ +|+||+++++++
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC   93 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            344567888999999999999999742        23579999987532 23346788999999999 899999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+..++|+||+ ++|+|.
T Consensus        94 ~~~~~~~lv~e~~-~~~~L~  112 (307)
T cd05098          94 TQDGPLYVIVEYA-SKGNLR  112 (307)
T ss_pred             ecCCceEEEEecC-CCCcHH
Confidence            9999999999999 999884

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.80  E-value=1.2e-08  Score=95.24  Aligned_cols=83  Identities=25%  Similarity=0.433  Sum_probs=71.0

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      |+..+.||+|++|.||++.. .+++.+|+|.+.....      ...+.+.+|+.++++++|+||+++++.+.+.+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            56678999999999999985 5688999999864321      1245789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      +||+ ++++|.
T Consensus        82 ~e~~-~~~~L~   91 (268)
T cd06630          82 VEWM-AGGSVS   91 (268)
T ss_pred             Eecc-CCCcHH
Confidence            9999 998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.80  E-value=1.5e-08  Score=95.64  Aligned_cols=77  Identities=31%  Similarity=0.373  Sum_probs=65.9

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++... +++.+|+|.+....   ....+.+..|+.+++.++|+||+++.+++......++||||+ ++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~-~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM-NGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC-CCCC
Confidence            699999999999864 68899999986432   123356788999999999999999999999999999999999 9999


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |.
T Consensus        80 L~   81 (280)
T cd05608          80 LR   81 (280)
T ss_pred             HH
Confidence            85

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.80  E-value=9.8e-09  Score=98.69  Aligned_cols=84  Identities=30%  Similarity=0.531  Sum_probs=69.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCC----EEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|...+.||+|+||.||+|.+. ++.    .||+|.++... ....+++.+|+.+++.++||||++++|++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            45788899999999999999863 333    48999986533 23456799999999999999999999998764 5679


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ++||+ ++|+|+
T Consensus        86 v~e~~-~~g~l~   96 (316)
T cd05108          86 ITQLM-PFGCLL   96 (316)
T ss_pred             eeecC-CCCCHH
Confidence            99999 999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.79  E-value=1.6e-08  Score=95.81  Aligned_cols=84  Identities=31%  Similarity=0.382  Sum_probs=72.5

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|++++++++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            5677889999999999999864 58899999986432   2334678899999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (290)
T cd05580          82 YV-PGGELF   89 (290)
T ss_pred             cC-CCCCHH
Confidence            99 999885

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.79  E-value=1.8e-08  Score=97.46  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=67.2

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.+|+|.++...   ....+.+.+|+.++.++ +||||+++++++...+..++||||+ +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~-~   79 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV-N   79 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC-C
Confidence            46899999999999864 57899999997532   23345678899888877 8999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|..
T Consensus        80 ~~~L~~   85 (329)
T cd05618          80 GGDLMF   85 (329)
T ss_pred             CCCHHH
Confidence            999854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=1.9e-08  Score=94.46  Aligned_cols=85  Identities=21%  Similarity=0.403  Sum_probs=73.0

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|...+.||.|++|.||++... +++.+++|.+.... ......+.+|+.+++.++|+||+++.+.+.++...++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            4666788999999999999864 58899999986543 334567899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        82 -~~~~L~~   88 (274)
T cd06609          82 -GGGSCLD   88 (274)
T ss_pred             -CCCcHHH
Confidence             9888753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.79  E-value=1.7e-08  Score=97.60  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=68.0

Q ss_pred             ccCccccc--cceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          349 TDNKLGEG--GFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       349 ~~~~lG~G--~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.++||+|  +|+.||++.. .+|+.||+|+++...  ....+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35689999  7889999986 468999999996532  222356778999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|.
T Consensus        82 -~~~~l~   87 (327)
T cd08227          82 -AYGSAK   87 (327)
T ss_pred             -CCCcHH
Confidence             998875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.79  E-value=1.9e-08  Score=95.73  Aligned_cols=86  Identities=27%  Similarity=0.461  Sum_probs=75.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .+|...+.||.|++|.||++.. .+++.|++|.+........+.+.+|+.+++.++|+||+++++.+...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4577888999999999999985 468899999987655455677899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        99 -~~~~L~~  105 (296)
T cd06655          99 -AGGSLTD  105 (296)
T ss_pred             -CCCcHHH
Confidence             9998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.78  E-value=7.1e-09  Score=97.55  Aligned_cols=84  Identities=23%  Similarity=0.468  Sum_probs=71.1

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      |+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|+||+++++.+...+..++|+||+ 
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-   84 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL-   84 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc-
Confidence            455678999999999999864 57889999986432 233467899999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++++|.-
T Consensus        85 ~~~~L~~   91 (277)
T cd06642          85 GGGSALD   91 (277)
T ss_pred             CCCcHHH
Confidence            9888753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.78  E-value=1.9e-08  Score=97.00  Aligned_cols=80  Identities=24%  Similarity=0.297  Sum_probs=67.0

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||++... +++.+|+|.++...   ....+.+..|.+++..+ +||||+++++++...+..+|||||+ +
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~-~   79 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV-N   79 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC-C
Confidence            46899999999999874 47899999986532   23345678899998876 8999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|..
T Consensus        80 ~~~L~~   85 (321)
T cd05591          80 GGDLMF   85 (321)
T ss_pred             CCcHHH
Confidence            999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=8.3e-10  Score=105.78  Aligned_cols=80  Identities=30%  Similarity=0.470  Sum_probs=67.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHH--HHHHHHHhcCC-CCCccceEeEEEeCC-EeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEF--KNEVVLVAKLQ-HRNLVRLLGFCLEGE-EKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~--~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lv  419 (437)
                      +.|...++||.|.||.||+++- ..++.||||+++..-. .+++.  ++|+..|++|. |||||+|..++.+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            4567778999999999999985 5688999999976432 24443  68999999997 999999999999988 89999


Q ss_pred             EecccC
Q 013711          420 YEFTLK  425 (437)
Q Consensus       420 ~E~~~~  425 (437)
                      ||||+.
T Consensus        89 fE~Md~   94 (538)
T KOG0661|consen   89 FEFMDC   94 (538)
T ss_pred             HHhhhh
Confidence            999933

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.78  E-value=1.5e-08  Score=94.90  Aligned_cols=84  Identities=23%  Similarity=0.404  Sum_probs=69.6

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccCc---c-------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---Q-------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      |...+.||+|+||.||+|.. .+++.+|+|.++....   .       ..+.+.+|+.+++.++|+||+++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            45678899999999999985 3588999998753211   1       12467889999999999999999999999999


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++|+||+ ++++|.-
T Consensus        83 ~~lv~e~~-~~~~L~~   97 (272)
T cd06629          83 LSIFLEYV-PGGSIGS   97 (272)
T ss_pred             eEEEEecC-CCCcHHH
Confidence            99999999 9998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=2e-09  Score=105.63  Aligned_cols=79  Identities=27%  Similarity=0.444  Sum_probs=68.6

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |...+.||.|+||.||-+.. .+.+.||||.+.-..   ...+++++.|+..|.+++|||+|.+.||+......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            55667899999999999985 467899999986433   34467899999999999999999999999999999999999


Q ss_pred             ccCC
Q 013711          423 TLKN  426 (437)
Q Consensus       423 ~~~~  426 (437)
                      | -|
T Consensus       108 C-lG  110 (948)
T KOG0577|consen  108 C-LG  110 (948)
T ss_pred             H-hc
Confidence            9 54

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.78  E-value=2.2e-08  Score=96.27  Aligned_cols=80  Identities=26%  Similarity=0.321  Sum_probs=66.2

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.||+|.++...   ....+.+..|..++..+ +||||+++++++...+..++||||+ +
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~-~   79 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL-N   79 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC-C
Confidence            46899999999999874 47899999986531   23345677788888764 8999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|.-
T Consensus        80 ~g~L~~   85 (316)
T cd05619          80 GGDLMF   85 (316)
T ss_pred             CCcHHH
Confidence            999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.78  E-value=2e-08  Score=95.04  Aligned_cols=83  Identities=29%  Similarity=0.344  Sum_probs=69.7

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |...+.||+|+||.||++... +++.+|+|.+....   ......+.+|+.++..++|+||+++.+.+..++..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            445678999999999999864 58899999986432   12234578899999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        82 ~-~~~~L~   88 (285)
T cd05632          82 M-NGGDLK   88 (285)
T ss_pred             c-cCccHH
Confidence            9 999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=2e-09  Score=102.30  Aligned_cols=86  Identities=20%  Similarity=0.379  Sum_probs=74.6

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .|...+.||+|.||.||||.. ..++.||+|++... .....+++.+|+.++.+++|+||.+.+|.+..+..+|++|||+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            355668999999999999986 45889999999753 3445688999999999999999999999999999999999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       .||++.=+
T Consensus        94 -~gGsv~~l  101 (467)
T KOG0201|consen   94 -GGGSVLDL  101 (467)
T ss_pred             -cCcchhhh
Confidence             99987543

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.78  E-value=2.1e-08  Score=93.03  Aligned_cols=84  Identities=19%  Similarity=0.310  Sum_probs=72.1

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |+..+.||+|+||.||.+.. .++..+++|.+...  +....+++.+|+.++++++|+||+++++++.+.+..++++||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            56778999999999998875 45889999988643  2344567899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        82 -~~~~L~~   88 (256)
T cd08221          82 -NGGTLYD   88 (256)
T ss_pred             -CCCcHHH
Confidence             9998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.77  E-value=1.8e-08  Score=95.53  Aligned_cols=83  Identities=25%  Similarity=0.432  Sum_probs=69.5

Q ss_pred             ccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      |.+.+.||+|+||.||+|...      ....+++|.+.... ....+.+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            566789999999999999852      23578999886533 23346789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      +||+ ++|+|.
T Consensus        82 ~e~~-~~~~L~   91 (290)
T cd05045          82 VEYA-KYGSLR   91 (290)
T ss_pred             EEec-CCCCHH
Confidence            9999 988875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.77  E-value=1.4e-08  Score=95.75  Aligned_cols=85  Identities=34%  Similarity=0.624  Sum_probs=71.3

Q ss_pred             ccccccCccccccceeEEEEEeCC------CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|...+.||+|+||.||+|....      ...+++|.+..... ...+.|.+|+.++.+++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            457778899999999999998632      25799999865332 23457899999999999999999999999989999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +++||+ ++|+|.
T Consensus        85 ~~~e~~-~~~~L~   96 (283)
T cd05048          85 MLFEYL-AHGDLH   96 (283)
T ss_pred             EEEecC-CCCcHH
Confidence            999999 999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.77  E-value=5.8e-09  Score=107.12  Aligned_cols=88  Identities=25%  Similarity=0.433  Sum_probs=73.4

Q ss_pred             HhhcccccccCccccccceeEEEEEeCCC-CEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeE-EEe-----
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLPSG-QEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGF-CLE-----  412 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~-~~~-----  412 (437)
                      .+...++.+.+.|-+|||+.||.+....+ .++|+|++-..++...+.+.+|+.+|++|+ |+|||.+++. ...     
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence            34456677889999999999999998665 999999997777778889999999999995 9999999993 222     


Q ss_pred             -CCEeEEEEecccCCCcc
Q 013711          413 -GEEKILVYEFTLKNKDN  429 (437)
Q Consensus       413 -~~~~~lv~E~~~~~gsL  429 (437)
                       .-+.+|+|||| +||.|
T Consensus       113 ~~~EvllLmEyC-~gg~L  129 (738)
T KOG1989|consen  113 GVWEVLLLMEYC-KGGSL  129 (738)
T ss_pred             ceeEEEeehhhc-cCCcH
Confidence             13689999999 87766

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.77  E-value=2.5e-08  Score=95.53  Aligned_cols=83  Identities=27%  Similarity=0.404  Sum_probs=69.6

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.|...+.||+|+||.||++... ++..+|+|.++... ......+.+|+.++++++|+||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            45777889999999999999864 57889999986533 23345678999999999999999999999999999999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      + ++ +|
T Consensus        86 ~-~~-~l   90 (309)
T cd07872          86 L-DK-DL   90 (309)
T ss_pred             C-CC-CH
Confidence            9 64 44

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.77  E-value=1.2e-08  Score=96.70  Aligned_cols=91  Identities=24%  Similarity=0.460  Sum_probs=74.7

Q ss_pred             HHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      ++...++|...+.||+|+||.||++...      ....+++|.+... ..+...++.+|+.++.++ +|+||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3445567888899999999999999863      2367899998753 223345688999999999 8999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ..+..+++|||+ ++|+|.-
T Consensus        87 ~~~~~~li~e~~-~~~~L~~  105 (293)
T cd05053          87 QEGPLYVVVEYA-AHGNLRD  105 (293)
T ss_pred             CCCCeEEEEEeC-CCCcHHH
Confidence            999999999999 9998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.77  E-value=2.7e-08  Score=92.54  Aligned_cols=84  Identities=19%  Similarity=0.246  Sum_probs=73.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|...+.||+|++|.||++... +++.+++|.+..... ...+.+.+|+..+.+++|+||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            5677889999999999999875 489999999876443 34578999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (264)
T cd06623          82 -DGGSLA   87 (264)
T ss_pred             -CCCcHH
Confidence             988875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.77  E-value=1.4e-08  Score=94.80  Aligned_cols=85  Identities=25%  Similarity=0.448  Sum_probs=72.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++.. .++..++||.+....   ....+++.+|+.+++.++|+||+++++++...+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            3567778999999999999985 478899999876432   223457899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus        82 e~~-~~~~L~   90 (267)
T cd08229          82 ELA-DAGDLS   90 (267)
T ss_pred             Eec-CCCCHH
Confidence            999 988875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.77  E-value=3e-08  Score=92.00  Aligned_cols=84  Identities=26%  Similarity=0.347  Sum_probs=71.9

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      |...++||+|+||.||++... ++..+++|.++.. .....+.+.+|+.+++.++|+||+++.+.+...+..++++||+ 
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-   80 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC-   80 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC-
Confidence            566789999999999999864 5889999998642 2334567889999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++|+|.-
T Consensus        81 ~~~~l~~   87 (255)
T cd08219          81 DGGDLMQ   87 (255)
T ss_pred             CCCcHHH
Confidence            9998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.77  E-value=1.1e-08  Score=96.53  Aligned_cols=84  Identities=26%  Similarity=0.384  Sum_probs=71.5

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|...++||+|+||.||++... +++.+|+|.+.....  ...+.+.+|++++..++||||+++++++..++..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            4667789999999999999975 488999999864322  2345788999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        82 ~-~~~~l~   88 (286)
T cd07846          82 V-DHTVLD   88 (286)
T ss_pred             C-CccHHH
Confidence            9 877664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=2.5e-08  Score=92.79  Aligned_cols=85  Identities=25%  Similarity=0.420  Sum_probs=72.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++|...+.||+|++|.||++.. .++..+++|.+....     ....+.+.+|+.++++++||||+++++++...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4577889999999999999986 458899999986432     1223568899999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      |+||+ ++++|.
T Consensus        82 v~e~~-~~~~l~   92 (263)
T cd06625          82 FMEYM-PGGSVK   92 (263)
T ss_pred             EEEEC-CCCcHH
Confidence            99999 998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.76  E-value=2.3e-08  Score=95.50  Aligned_cols=84  Identities=18%  Similarity=0.232  Sum_probs=72.0

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... .++.|++|.+....   ....+.+.+|+.+++.++||||+++++.+..++..++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            5677889999999999999864 47899999986542   2334578899999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~g~~L~   89 (305)
T cd05609          82 YV-EGGDCA   89 (305)
T ss_pred             cC-CCCcHH
Confidence            99 998875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.76  E-value=2.1e-08  Score=93.07  Aligned_cols=83  Identities=23%  Similarity=0.415  Sum_probs=71.4

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |+..+.||+|+||.+|++... +++.+++|.+...  .....+++.+|+.++++++|+||+++.+++...+..++|+||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            567789999999999999863 5889999998642  2234467899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|+
T Consensus        82 -~~~~l~   87 (256)
T cd08218          82 -EGGDLY   87 (256)
T ss_pred             -CCCcHH
Confidence             888875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.76  E-value=1.6e-08  Score=96.02  Aligned_cols=85  Identities=31%  Similarity=0.556  Sum_probs=72.3

Q ss_pred             ccccccCccccccceeEEEEEeC------CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|...+.||+|+||.||++...      ++..+++|.+........+.+.+|+.++.+++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45677789999999999999742      345689999876554555779999999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++++|.
T Consensus        85 v~e~~-~~~~L~   95 (291)
T cd05094          85 VFEYM-KHGDLN   95 (291)
T ss_pred             EEecC-CCCcHH
Confidence            99999 988874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.76  E-value=1.6e-08  Score=95.30  Aligned_cols=88  Identities=24%  Similarity=0.481  Sum_probs=72.9

Q ss_pred             hcccccccCccccccceeEEEEEeCC-----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~-----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~  415 (437)
                      ..++|...+.||+|+||.||+|...+     +..|++|.+.... ....+.+.+|+.++++++|+||+++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35677888999999999999999754     6789999986532 2335678999999999999999999998876 467


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++++||+ ++|+|.-
T Consensus        84 ~~~~~~~~-~~~~L~~   98 (280)
T cd05043          84 PFVLYPYM-NWGNLKL   98 (280)
T ss_pred             CEEEEEcC-CCCcHHH
Confidence            89999999 8888753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.76  E-value=2.6e-08  Score=92.72  Aligned_cols=83  Identities=28%  Similarity=0.469  Sum_probs=72.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|+||.||++... ++..+++|.++....  ...+.+.+|+.++++++|+||+++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            566789999999999999864 688999999875433  24568999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (264)
T cd06626          82 -SGGTLE   87 (264)
T ss_pred             -CCCcHH
Confidence             888775

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.76  E-value=2.4e-08  Score=96.00  Aligned_cols=80  Identities=26%  Similarity=0.304  Sum_probs=65.1

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.||+|.++...   ....+.+..|..++..+ +||||+++++.+..++..++||||+ +
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~-~   79 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL-N   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC-C
Confidence            36899999999999874 47899999986431   23345566777777654 8999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+-
T Consensus        80 gg~L~~   85 (316)
T cd05592          80 GGDLMF   85 (316)
T ss_pred             CCcHHH
Confidence            999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.76  E-value=2e-08  Score=94.01  Aligned_cols=83  Identities=30%  Similarity=0.541  Sum_probs=67.7

Q ss_pred             ccccCccccccceeEEEEEeCC----CCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE-----
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----  415 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  415 (437)
                      |.+.+.||+|+||.||++....    +..+|+|.++...  ......+.+|+..++.++|+||+++++.+...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            3567889999999999998632    3679999986432  2334678999999999999999999998876554     


Q ss_pred             -eEEEEecccCCCccc
Q 013711          416 -KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 -~~lv~E~~~~~gsL~  430 (437)
                       .++++||+ ++|+|.
T Consensus        81 ~~~~v~e~~-~~~~l~   95 (273)
T cd05035          81 KPMVILPFM-KHGDLH   95 (273)
T ss_pred             ccEEEEecc-CCCCHH
Confidence             79999999 999884

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.76  E-value=1.4e-08  Score=98.61  Aligned_cols=78  Identities=32%  Similarity=0.510  Sum_probs=67.8

Q ss_pred             cCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          350 DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      .++||+|.||.||-|+. ++|+.||||.+.+.  ..+..+.+.+|+.||.+++||.||.|...+...+..++|||=+  +
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl--~  646 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL--H  646 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh--c
Confidence            57899999999999985 56999999999753  2344578999999999999999999999999999999999998  4


Q ss_pred             Ccc
Q 013711          427 KDN  429 (437)
Q Consensus       427 gsL  429 (437)
                      |+.
T Consensus       647 GDM  649 (888)
T KOG4236|consen  647 GDM  649 (888)
T ss_pred             chH
Confidence            543

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.76  E-value=2.3e-08  Score=96.31  Aligned_cols=80  Identities=25%  Similarity=0.332  Sum_probs=64.8

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHH-HHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||++... +++.+|+|.+....   ......+..|.. +++.++||||+++++.+...+..++||||+ +
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV-N   79 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC-C
Confidence            46899999999999874 58899999986432   122345566654 578889999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+.
T Consensus        80 ~~~L~~   85 (321)
T cd05603          80 GGELFF   85 (321)
T ss_pred             CCCHHH
Confidence            999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.76  E-value=2.3e-08  Score=96.21  Aligned_cols=80  Identities=26%  Similarity=0.319  Sum_probs=67.3

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.+|+|.++..   .......+.+|..++..+ +||||+++++++...+..++||||+ +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~   79 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV-N   79 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC-C
Confidence            36899999999999875 4789999999753   223345678899999888 7999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|.-
T Consensus        80 ~~~L~~   85 (318)
T cd05570          80 GGDLMF   85 (318)
T ss_pred             CCCHHH
Confidence            999853

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.76  E-value=2e-08  Score=97.27  Aligned_cols=87  Identities=17%  Similarity=0.158  Sum_probs=67.2

Q ss_pred             hhcccccccCccccccceeEEEEEeC--CCCEEEEEEccccC-----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP--SGQEIAVKRLSKAS-----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~--~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      ..-++|...+.||+|+||.||++...  +++.+|||++....     ....+.|.+|+++|.+++|+|+++.+..   ..
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            34467888999999999999999864  57778999875321     1124568999999999999999963322   24


Q ss_pred             EeEEEEecccCCCccccc
Q 013711          415 EKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l~  432 (437)
                      ..+|||||+ +|++|+..
T Consensus        92 ~~~LVmE~~-~G~~L~~~  108 (365)
T PRK09188         92 KDGLVRGWT-EGVPLHLA  108 (365)
T ss_pred             CcEEEEEcc-CCCCHHHh
Confidence            579999999 99998754

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.76  E-value=5.5e-09  Score=97.36  Aligned_cols=75  Identities=31%  Similarity=0.496  Sum_probs=59.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----EeEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKILV  419 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lv  419 (437)
                      .+...+++|.|+||.||+|.+. +++.||||..-...+    --.+|+.+|+.++|||||+|+-++....     .+.||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            3556789999999999999974 478999999855332    2257899999999999999998886532     35689


Q ss_pred             EecccC
Q 013711          420 YEFTLK  425 (437)
Q Consensus       420 ~E~~~~  425 (437)
                      |||| |
T Consensus       101 leym-P  105 (364)
T KOG0658|consen  101 LEYM-P  105 (364)
T ss_pred             HHhc-h
Confidence            9999 5

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.76  E-value=2.5e-08  Score=96.25  Aligned_cols=81  Identities=25%  Similarity=0.305  Sum_probs=65.0

Q ss_pred             CccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHH-HHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++.. .+|+.+|+|++....   ......+..|.. +++.++||||+++++.+...+..++||||+ +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~-~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV-N   79 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC-C
Confidence            4689999999999986 468899999986431   222345666655 467789999999999999999999999999 9


Q ss_pred             CCccccc
Q 013711          426 NKDNWIG  432 (437)
Q Consensus       426 ~gsL~l~  432 (437)
                      +|+|+..
T Consensus        80 ~~~L~~~   86 (325)
T cd05604          80 GGELFFH   86 (325)
T ss_pred             CCCHHHH
Confidence            9998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.76  E-value=1.3e-09  Score=98.75  Aligned_cols=82  Identities=23%  Similarity=0.431  Sum_probs=72.5

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +-|.+..+||+|+||.|||+.. ..|+.+|+|.++-.  .+.+++..|+.+|.+-+.+.+|+++|.+.....+|+|||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            3467788999999999999975 46899999998754  46789999999999999999999999999999999999999


Q ss_pred             cCCCcc
Q 013711          424 LKNKDN  429 (437)
Q Consensus       424 ~~~gsL  429 (437)
                       .-|+.
T Consensus       111 -GAGSi  115 (502)
T KOG0574|consen  111 -GAGSI  115 (502)
T ss_pred             -CCCcH
Confidence             76764

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.76  E-value=1.8e-08  Score=93.46  Aligned_cols=78  Identities=32%  Similarity=0.586  Sum_probs=64.7

Q ss_pred             CccccccceeEEEEEeCCCC-----------EEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          351 NKLGEGGFGEVYKGVLPSGQ-----------EIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~-----------~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      +.||+|+||.||++...+..           .+++|.+...... ...+.+|+.+++.++|+||+++++.+.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46899999999999975422           5778877544322 6789999999999999999999999988 778999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      +||+ ++|+|.-
T Consensus        79 ~e~~-~~~~L~~   89 (259)
T cd05037          79 EEYV-KFGPLDV   89 (259)
T ss_pred             EEcC-CCCcHHH
Confidence            9999 9999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.75  E-value=2.5e-08  Score=93.42  Aligned_cols=88  Identities=28%  Similarity=0.430  Sum_probs=72.2

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeC------
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG------  413 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~------  413 (437)
                      .+.+.|...+.||+|+||.||+|... .++.+|+|.+.... .....+.+|+.++.++ +|+||+++++.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            34566777889999999999999864 57899999986533 3456789999999998 799999999998753      


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      ...+++|||+ ++++|.-
T Consensus        82 ~~~~iv~e~~-~~~~L~~   98 (272)
T cd06637          82 DQLWLVMEFC-GAGSVTD   98 (272)
T ss_pred             cEEEEEEEcC-CCCcHHH
Confidence            4589999999 9888764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.75  E-value=1.5e-08  Score=94.89  Aligned_cols=78  Identities=28%  Similarity=0.447  Sum_probs=64.5

Q ss_pred             ccccccceeEEEEEeCCC---CEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          352 KLGEGGFGEVYKGVLPSG---QEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~~~---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .||+|+||.||++...++   ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+......++||||+ ++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYC-ELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecC-CCC
Confidence            589999999999975333   345677665432 234568999999999999999999999999999999999999 999


Q ss_pred             ccc
Q 013711          428 DNW  430 (437)
Q Consensus       428 sL~  430 (437)
                      +|.
T Consensus        81 ~L~   83 (268)
T cd05086          81 DLK   83 (268)
T ss_pred             cHH
Confidence            985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.75  E-value=1.4e-08  Score=95.41  Aligned_cols=87  Identities=28%  Similarity=0.484  Sum_probs=73.0

Q ss_pred             hcccccccCccccccceeEEEEEeCC------CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      ..++|...+.||+|+||.||++....      +..+++|.+.... ......+.+|+.++..++|+||+++++++.....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            34567788999999999999998632      3689999986432 2334578999999999999999999999999999


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++||||+ ++|+|.
T Consensus        84 ~~~v~e~~-~~~~L~   97 (277)
T cd05032          84 TLVVMELM-AKGDLK   97 (277)
T ss_pred             cEEEEecC-CCCCHH
Confidence            99999999 988875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.75  E-value=3.1e-08  Score=93.47  Aligned_cols=85  Identities=26%  Similarity=0.383  Sum_probs=71.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|+..+.||+|+||.||++... +++.+|+|++....  ....+.+.+|+.++++++|+||+++++.+......++|+||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            4677788999999999999875 58899999986432  22345688999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + +++.|..
T Consensus        82 ~-~~~~l~~   89 (286)
T cd07847          82 C-DHTVLNE   89 (286)
T ss_pred             c-CccHHHH
Confidence            9 8776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.75  E-value=2.2e-08  Score=93.28  Aligned_cols=83  Identities=31%  Similarity=0.461  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      +.+.+.+.||+|++|.||++....+..+++|.+.... ...+.+.+|+.++++++|+|++++++++. .+..+++|||+ 
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~-   82 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM-   82 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC-
Confidence            4577788999999999999998777789999886432 33467899999999999999999998775 56689999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++++|.
T Consensus        83 ~~~~L~   88 (260)
T cd05069          83 GKGSLL   88 (260)
T ss_pred             CCCCHH
Confidence            888874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.75  E-value=1.8e-08  Score=95.90  Aligned_cols=85  Identities=26%  Similarity=0.504  Sum_probs=70.9

Q ss_pred             ccccccCccccccceeEEEEEeCC-C--CEEEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-G--QEIAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-~--~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ++|.+.+.||+|+||.||++...+ +  ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++......+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            567888999999999999998743 3  35788888642 223456789999999999 799999999999998999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      +||+ ++|+|.
T Consensus        82 ~e~~-~~~~L~   91 (297)
T cd05089          82 IEYA-PYGNLL   91 (297)
T ss_pred             EEec-CCCcHH
Confidence            9999 999884

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.75  E-value=1.8e-08  Score=96.26  Aligned_cols=86  Identities=28%  Similarity=0.515  Sum_probs=70.7

Q ss_pred             cccccccCccccccceeEEEEEeC-CCC--EEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQ--EIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~--~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|.+.+.||+|+||.||++... ++.  .+++|.++... ....+.+.+|+.++.++ +|+||+++++++...+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            356778899999999999999864 343  46788776432 23345788999999999 89999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      |+||+ ++|+|.
T Consensus        86 v~e~~-~~~~L~   96 (303)
T cd05088          86 AIEYA-PHGNLL   96 (303)
T ss_pred             EEEeC-CCCcHH
Confidence            99999 998874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.75  E-value=2.5e-08  Score=93.93  Aligned_cols=86  Identities=27%  Similarity=0.481  Sum_probs=71.4

Q ss_pred             ccccccCccccccceeEEEEEeC-----CCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-----~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  416 (437)
                      +.+...+.||+|+||.||++.+.     .+..+|+|.+...... ..+.|.+|+.+++.++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            34666788999999999999863     3678999999754432 35689999999999999999999999877  5578


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++++||+ ++++|.-
T Consensus        84 ~lv~e~~-~~~~l~~   97 (284)
T cd05038          84 RLIMEYL-PSGSLRD   97 (284)
T ss_pred             EEEEecC-CCCCHHH
Confidence            9999999 9988853

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.75  E-value=1.2e-08  Score=94.77  Aligned_cols=84  Identities=24%  Similarity=0.264  Sum_probs=72.5

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... ++..+++|.+....   ....+.+.+|+.++++++||||+++++.+..+...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            3667789999999999999875 58899999996532   2345689999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        81 ~~-~~~~L~   88 (258)
T cd05578          81 LL-LGGDLR   88 (258)
T ss_pred             CC-CCCCHH
Confidence            99 998875

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.75  E-value=3.3e-08  Score=93.57  Aligned_cols=83  Identities=29%  Similarity=0.337  Sum_probs=69.9

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |+..+.||+|+||.||++... +++.+|+|.+.....   .....+.+|+.++++++|+||+++.+.+...+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            455678999999999999864 588999999864321   2234578899999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        82 ~-~g~~L~   88 (285)
T cd05630          82 M-NGGDLK   88 (285)
T ss_pred             c-CCCcHH
Confidence            9 999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.75  E-value=2.7e-08  Score=91.94  Aligned_cols=79  Identities=32%  Similarity=0.586  Sum_probs=69.2

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCcc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      ++||+|+||.||++...+++.|++|.+...... ....+.+|+.++++++|+||+++++++......++|+||+ ++++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~-~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELV-PGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcC-CCCcH
Confidence            468999999999999866999999998754332 4567999999999999999999999999999999999999 88887


Q ss_pred             c
Q 013711          430 W  430 (437)
Q Consensus       430 ~  430 (437)
                      .
T Consensus        80 ~   80 (251)
T cd05041          80 L   80 (251)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.74  E-value=2.5e-08  Score=96.13  Aligned_cols=80  Identities=29%  Similarity=0.343  Sum_probs=67.2

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.||+|.+...   .....+.+..|..++..+ +||||+++++++...+..++||||+ +
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~-~   79 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV-N   79 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC-C
Confidence            36899999999999864 5789999998642   223345678898888877 7999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|..
T Consensus        80 ~g~L~~   85 (320)
T cd05590          80 GGDLMF   85 (320)
T ss_pred             CchHHH
Confidence            999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.74  E-value=3.1e-08  Score=91.70  Aligned_cols=82  Identities=44%  Similarity=0.722  Sum_probs=70.8

Q ss_pred             cccCccccccceeEEEEEeCC-----CCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          348 STDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~-----~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .+.+.||+|+||.||++...+     +..+|+|.+...... ..+.+..|+.++..++|+||+++++.+...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999998743     378999999754433 46789999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~l~   89 (258)
T smart00219       82 YM-EGGDLL   89 (258)
T ss_pred             cc-CCCCHH
Confidence            99 988875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.74  E-value=1.9e-08  Score=93.19  Aligned_cols=84  Identities=26%  Similarity=0.449  Sum_probs=71.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|+||.||++... ++..+++|.+....  ....+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            566788999999999999975 47889999986432  234467889999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        82 -~~~~L~~   88 (257)
T cd08225          82 -DGGDLMK   88 (257)
T ss_pred             -CCCcHHH
Confidence             9888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.74  E-value=3e-08  Score=92.58  Aligned_cols=85  Identities=22%  Similarity=0.366  Sum_probs=69.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  416 (437)
                      .+|...+.||+|+||.||++... ++..|++|.+....     ....+.+.+|+.++.+++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            35777899999999999999864 58899999885321     12235788999999999999999999988763  468


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++++||+ ++++|.
T Consensus        82 ~~v~e~~-~~~~L~   94 (265)
T cd06652          82 SIFMEHM-PGGSIK   94 (265)
T ss_pred             EEEEEec-CCCcHH
Confidence            8999999 999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.74  E-value=3.5e-08  Score=92.91  Aligned_cols=77  Identities=27%  Similarity=0.303  Sum_probs=64.9

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++... +|+.+|+|.+....   ....+.+..|++++.+++||||+++.+.+..+...++||||+ ++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~-~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM-NGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC-CCCC
Confidence            699999999999864 58999999986421   122345667999999999999999999999999999999999 9999


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |.
T Consensus        80 L~   81 (277)
T cd05607          80 LK   81 (277)
T ss_pred             HH
Confidence            84

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.74  E-value=2.9e-08  Score=95.84  Aligned_cols=85  Identities=22%  Similarity=0.201  Sum_probs=69.6

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCC-CCccceEeEEEeCCEeEEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~  420 (437)
                      +|...+.||+|+||.||++... +++.+|+|++...   .....+.+..|..++..++| ++|+++.+++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            3567789999999999999864 4789999998643   22345678899999999966 56888999998899999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++|+|.-
T Consensus        81 E~~-~~g~L~~   90 (324)
T cd05587          81 EYV-NGGDLMY   90 (324)
T ss_pred             cCC-CCCcHHH
Confidence            999 9999853

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.74  E-value=4.8e-08  Score=91.22  Aligned_cols=83  Identities=29%  Similarity=0.486  Sum_probs=69.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc---------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ---------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      |.....||+|++|.||+|... ++..+++|.+......         ..+.+.+|+.++.+++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            455678999999999999863 5789999988643221         124688999999999999999999999999999


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++++||+ ++++|.
T Consensus        82 ~lv~e~~-~~~~L~   94 (267)
T cd06628          82 NIFLEYV-PGGSVA   94 (267)
T ss_pred             EEEEEec-CCCCHH
Confidence            9999999 988874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.73  E-value=1.9e-08  Score=96.52  Aligned_cols=89  Identities=24%  Similarity=0.452  Sum_probs=72.6

Q ss_pred             HhhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      ....++|.+.++||+|+||.||++...        ....+|+|.+.... .....++.+|+.++..+ +||||+++++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            344566788899999999999999741        24578999987532 23346788999999999 699999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ......++++||+ ++|+|.
T Consensus        88 ~~~~~~~lv~e~~-~~g~L~  106 (314)
T cd05099          88 TQEGPLYVIVEYA-AKGNLR  106 (314)
T ss_pred             ccCCceEEEEecC-CCCcHH
Confidence            9989999999999 999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.73  E-value=3.6e-08  Score=95.12  Aligned_cols=80  Identities=23%  Similarity=0.326  Sum_probs=64.6

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHH-HHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.||+|++....   ....+.+..|.. +++.++||||+++++.+...+..++||||+ +
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~-~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV-N   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC-C
Confidence            46899999999999874 68999999986432   122345556655 467789999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+.
T Consensus        80 ~g~L~~   85 (323)
T cd05575          80 GGELFF   85 (323)
T ss_pred             CCCHHH
Confidence            999854

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.73  E-value=3.4e-08  Score=95.61  Aligned_cols=84  Identities=23%  Similarity=0.304  Sum_probs=70.1

Q ss_pred             ccccCccccccceeEEEEEe----CCCCEEEEEEccccC----ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      |.+.+.||+|+||.||++..    ..+..+|+|.+....    ....+.+.+|+.++..+ +|+||+++.+++...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            56778999999999999874    357899999986421    22345688899999999 5999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++|+|+-
T Consensus        82 lv~e~~-~~g~L~~   94 (332)
T cd05614          82 LILDYV-SGGEMFT   94 (332)
T ss_pred             EEEeCC-CCCcHHH
Confidence            999999 9999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.73  E-value=2.3e-08  Score=95.21  Aligned_cols=83  Identities=33%  Similarity=0.386  Sum_probs=71.3

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.....||+|+||.||++... ++..+++|.+........+.+.+|+.++..++||||+++++.+..++..++|+||+ +
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~-~  101 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL-Q  101 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC-C
Confidence            334457999999999999864 68899999987654455667899999999999999999999999999999999999 8


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +++|.
T Consensus       102 ~~~L~  106 (297)
T cd06659         102 GGALT  106 (297)
T ss_pred             CCCHH
Confidence            88874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.73  E-value=2.7e-08  Score=92.38  Aligned_cols=79  Identities=32%  Similarity=0.485  Sum_probs=67.2

Q ss_pred             CccccccceeEEEEEeCC--C--CEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPS--G--QEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~--~--~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|++|.||++.+.+  +  ..+|+|.+..... ...+.+.+|+.++++++|+||+++++.+.. ...++|+||+ +
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~-~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA-P   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec-C
Confidence            468999999999998643  3  3689999976544 445689999999999999999999999888 8899999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|.-
T Consensus        79 ~~~L~~   84 (257)
T cd05040          79 LGSLLD   84 (257)
T ss_pred             CCcHHH
Confidence            998863

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.73  E-value=3.2e-08  Score=93.43  Aligned_cols=85  Identities=31%  Similarity=0.469  Sum_probs=70.7

Q ss_pred             cccccCccccccceeEEEEEe-----CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  417 (437)
                      .|...+.||+|+||.||.+.+     ..+..|++|.++... ....+.+.+|+.+++.++|+||+++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            456778999999999999974     247789999987543 33346799999999999999999999998775  5689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++++|.-
T Consensus        85 lv~e~~-~g~~L~~   97 (284)
T cd05079          85 LIMEFL-PSGSLKE   97 (284)
T ss_pred             EEEEcc-CCCCHHH
Confidence            999999 9999853

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.73  E-value=4.1e-08  Score=90.97  Aligned_cols=83  Identities=18%  Similarity=0.256  Sum_probs=71.3

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|+||.||++.. .+++.+++|.+....  ....+.+.+|+.++++++|+||+++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            56678999999999999986 357899999986432  234567999999999999999999999999899999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (256)
T cd08220          82 -PGGTLA   87 (256)
T ss_pred             -CCCCHH
Confidence             998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.73  E-value=4.3e-08  Score=93.44  Aligned_cols=84  Identities=29%  Similarity=0.407  Sum_probs=70.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.|...+.||+|+||.||++... +++.||+|.++... ......+.+|+.++++++|+||+++++++...+..++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            45777889999999999999864 57899999986433 23345678999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + + ++|.
T Consensus        86 ~-~-~~l~   91 (301)
T cd07873          86 L-D-KDLK   91 (301)
T ss_pred             c-c-cCHH
Confidence            9 6 4553

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.72  E-value=1.5e-08  Score=98.37  Aligned_cols=89  Identities=25%  Similarity=0.427  Sum_probs=71.3

Q ss_pred             HhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ..+.++|.+.+.||+|+||.||++...      .++.||+|+++... ....+.+.+|+.++.++ +|+||+++++++..
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~   82 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK   82 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence            345567888999999999999999642      24789999986432 22345688999999999 89999999998875


Q ss_pred             C-CEeEEEEecccCCCccc
Q 013711          413 G-EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~-~~~~lv~E~~~~~gsL~  430 (437)
                      . ...++++||+ ++|+|.
T Consensus        83 ~~~~~~~v~ey~-~~~~L~  100 (337)
T cd05054          83 PGGPLMVIVEYC-KFGNLS  100 (337)
T ss_pred             CCCCEEEEEecC-CCCCHH
Confidence            4 5688999999 999885

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.72  E-value=2.3e-08  Score=95.49  Aligned_cols=88  Identities=23%  Similarity=0.445  Sum_probs=72.5

Q ss_pred             hhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      ...++|.+.+.||+|+||.||++...        ++..+++|.+.... ....+++.+|+.++..+ +||||+++++.+.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            34456778899999999999999741        24579999986432 23456799999999999 8999999999999


Q ss_pred             eCCEeEEEEecccCCCccc
Q 013711          412 EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~  430 (437)
                      .....++||||+ ++|+|.
T Consensus        92 ~~~~~~lv~e~~-~~~~L~  109 (304)
T cd05101          92 QDGPLYVIVEYA-SKGNLR  109 (304)
T ss_pred             cCCceEEEEecC-CCCcHH
Confidence            999999999999 998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.72  E-value=4.5e-08  Score=92.49  Aligned_cols=86  Identities=28%  Similarity=0.447  Sum_probs=75.1

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++.|...+.||+|++|.||++... ++..+++|.+..... ..+.+.+|+++++.++|+||+++++.+...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4456777889999999999999975 588999999875443 45678999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        96 ~~-~~~~L~  103 (286)
T cd06614          96 YM-DGGSLT  103 (286)
T ss_pred             cc-CCCcHH
Confidence            99 888875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.72  E-value=5.1e-08  Score=90.81  Aligned_cols=84  Identities=20%  Similarity=0.359  Sum_probs=72.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|+..+.||+|+||.||++... ++..+++|.+.... ....+.+.+|+.+++.++|+||+++.+.+...+..++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            5777889999999999999864 57889999986432 234578999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~l~   87 (267)
T cd06610          82 -SGGSLL   87 (267)
T ss_pred             -CCCcHH
Confidence             888765

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.72  E-value=3e-08  Score=94.09  Aligned_cols=86  Identities=31%  Similarity=0.454  Sum_probs=71.9

Q ss_pred             cccccccCccccccceeEEEEEeCC-----------------CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-----------------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVR  405 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~  405 (437)
                      ..+|.+.+.||+|+||.||++....                 +..||+|.+.... ....+++.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4567788999999999999987532                 2458999987543 234567999999999999999999


Q ss_pred             eEeEEEeCCEeEEEEecccCCCccc
Q 013711          406 LLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       406 l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +++++...+..++++||+ ++++|.
T Consensus        84 ~~~~~~~~~~~~lv~e~~-~~~~L~  107 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYM-ENGDLN  107 (296)
T ss_pred             EEEEEecCCCcEEEEecC-CCCCHH
Confidence            999999999999999999 888875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.72  E-value=4e-08  Score=92.96  Aligned_cols=84  Identities=20%  Similarity=0.251  Sum_probs=69.9

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  421 (437)
                      +|...+.||+|.+|.||++... +++.+++|.+..... .....+.+|++++++++||||+++++++...  ...++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            4667789999999999999974 578999999875332 3346789999999999999999999988654  36899999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (287)
T cd06621          82 YC-EGGSLD   89 (287)
T ss_pred             ec-CCCCHH
Confidence            99 999883

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.72  E-value=4.2e-08  Score=103.73  Aligned_cols=85  Identities=24%  Similarity=0.235  Sum_probs=73.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.++||+|+||.||++... .++.||+|+++....   ...+.+..|+.++..++|+||+++++.+...+..+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            46778899999999999999975 588999999865322   22367889999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus        84 Ey~-~g~~L~   92 (669)
T cd05610          84 EYL-IGGDVK   92 (669)
T ss_pred             eCC-CCCCHH
Confidence            999 999885

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.72  E-value=2.1e-08  Score=93.94  Aligned_cols=86  Identities=27%  Similarity=0.444  Sum_probs=69.6

Q ss_pred             cccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ..++...+.||+|+||.||+|...+    ...+++|...... ....+.+.+|+.++++++||||+++++++.. +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            3456778899999999999998633    2468999886543 3445679999999999999999999998865 55789


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus        84 v~e~~-~~~~L~~   95 (270)
T cd05056          84 VMELA-PLGELRS   95 (270)
T ss_pred             EEEcC-CCCcHHH
Confidence            99999 9988753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.71  E-value=8.9e-09  Score=95.85  Aligned_cols=80  Identities=30%  Similarity=0.524  Sum_probs=66.4

Q ss_pred             CccccccceeEEEEEeCC--------CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          351 NKLGEGGFGEVYKGVLPS--------GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.||+|+||.||+|....        ...+++|.+........+.+.+|+.+++.++||||+++++.+..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            468999999999998532        234788887654444456789999999999999999999999998999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++|+|.-
T Consensus        81 ~-~~g~L~~   88 (258)
T cd05078          81 V-KFGSLDT   88 (258)
T ss_pred             C-CCCcHHH
Confidence            9 9998854

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.71  E-value=4.2e-08  Score=92.91  Aligned_cols=84  Identities=29%  Similarity=0.424  Sum_probs=70.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|++|.||++... +++.+++|.+..... .....+.+|+.++++++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            45777889999999999999875 578999999865322 2234578899999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++ +|.
T Consensus        85 ~-~~-~L~   90 (291)
T cd07844          85 L-DT-DLK   90 (291)
T ss_pred             C-CC-CHH
Confidence            9 64 654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.71  E-value=3.9e-08  Score=94.83  Aligned_cols=85  Identities=22%  Similarity=0.200  Sum_probs=69.4

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +|...+.||+|+||.||++... +++.+|+|.+....   ....+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            3567789999999999999864 47899999986532   22334577788888877 6899999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++|+|.-
T Consensus        81 E~~-~~g~L~~   90 (323)
T cd05616          81 EYV-NGGDLMY   90 (323)
T ss_pred             cCC-CCCCHHH
Confidence            999 9999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.71  E-value=2.9e-08  Score=106.28  Aligned_cols=89  Identities=25%  Similarity=0.369  Sum_probs=73.0

Q ss_pred             HhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEE  415 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~  415 (437)
                      ....+.|.+.+.||+|+||.||++... .+..+|+|.+...  .......|..|+.++..|+|||||++++++..  ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            334567888999999999999999864 4678999988643  22334678999999999999999999998865  356


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      ++|||||+ ++|+|.
T Consensus        89 lyIVMEY~-~gGSL~  102 (1021)
T PTZ00266         89 LYILMEFC-DAGDLS  102 (1021)
T ss_pred             EEEEEeCC-CCCcHH
Confidence            89999999 999985

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.71  E-value=3.7e-08  Score=91.69  Aligned_cols=78  Identities=29%  Similarity=0.477  Sum_probs=64.1

Q ss_pred             ccccccceeEEEEEeC---CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          352 KLGEGGFGEVYKGVLP---SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .||+|+||.||+|.+.   .+..||+|.+..... ...+.|.+|+.++++++|+||+++++++. .+..++||||+ ++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~-~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMA-SGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeC-CCC
Confidence            3899999999999763   355799999875432 23467999999999999999999999875 45789999999 999


Q ss_pred             cccc
Q 013711          428 DNWI  431 (437)
Q Consensus       428 sL~l  431 (437)
                      +|.-
T Consensus        80 ~L~~   83 (257)
T cd05115          80 PLNK   83 (257)
T ss_pred             CHHH
Confidence            8863

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.71  E-value=4.8e-08  Score=93.79  Aligned_cols=86  Identities=23%  Similarity=0.266  Sum_probs=73.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +|...+.||+|+||.||++... ++..+|+|.+.....   ...+.+.+|++++..++|+||+++++.+......++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5677789999999999999875 488999999865432   234578999999999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      |+ .+++|+-.
T Consensus        82 ~~-~~~~L~~~   91 (316)
T cd05574          82 YC-PGGELFRL   91 (316)
T ss_pred             ec-CCCCHHHH
Confidence            99 99888654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.71  E-value=4.4e-08  Score=92.82  Aligned_cols=95  Identities=26%  Similarity=0.398  Sum_probs=78.0

Q ss_pred             ccchhhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      .+.+.++..+.++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++.
T Consensus        11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   89 (291)
T cd06639          11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY   89 (291)
T ss_pred             hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence            355566677788899999999999999999986 458899999986432 2245678899999999 8999999999987


Q ss_pred             eC-----CEeEEEEecccCCCccc
Q 013711          412 EG-----EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 ~~-----~~~~lv~E~~~~~gsL~  430 (437)
                      ..     ...++|+||+ ++|+|.
T Consensus        90 ~~~~~~~~~~~lv~ey~-~~~sL~  112 (291)
T cd06639          90 KADKLVGGQLWLVLELC-NGGSVT  112 (291)
T ss_pred             eccccCCCeeEEEEEEC-CCCcHH
Confidence            54     3589999999 999885

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.71  E-value=4.1e-08  Score=91.95  Aligned_cols=82  Identities=33%  Similarity=0.610  Sum_probs=65.8

Q ss_pred             cccCccccccceeEEEEEeCC-CC--EEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CEe
Q 013711          348 STDNKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEK  416 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~-~~--~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~  416 (437)
                      .+.++||+|+||.||+|.+.. +.  .+|+|.++..  .....+.+.+|+.+++.++|+||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456889999999999999754 32  6899988653  233456789999999999999999999987542      246


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++++||+ ++|+|.
T Consensus        82 ~~v~e~~-~~~~l~   94 (272)
T cd05075          82 VVILPFM-KHGDLH   94 (272)
T ss_pred             EEEEEeC-CCCcHH
Confidence            8999999 999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.70  E-value=2.7e-08  Score=96.43  Aligned_cols=88  Identities=22%  Similarity=0.432  Sum_probs=71.8

Q ss_pred             hhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      .....|.+.+.||+|+||.||++...        ....+|+|.++... ....+++.+|+.++.++ +|+||+++++++.
T Consensus         9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (334)
T cd05100           9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT   88 (334)
T ss_pred             cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence            33445778899999999999999742        12368999886432 23356799999999999 8999999999999


Q ss_pred             eCCEeEEEEecccCCCccc
Q 013711          412 EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~  430 (437)
                      ..+..++++||+ ++|+|.
T Consensus        89 ~~~~~~lv~e~~-~~g~L~  106 (334)
T cd05100          89 QDGPLYVLVEYA-SKGNLR  106 (334)
T ss_pred             cCCceEEEEecC-CCCcHH
Confidence            999999999999 999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.70  E-value=5.6e-08  Score=91.32  Aligned_cols=84  Identities=23%  Similarity=0.504  Sum_probs=71.5

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCC---CCCccceEeEEEeCCEeEEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .|+..+.||+|+||.||++.. .++..+++|.++.. .....+++.+|+.++++++   |||++++++++..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            356678899999999999996 46889999998653 2344567889999999986   999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus        82 e~~-~~~~L~   90 (277)
T cd06917          82 EYA-EGGSVR   90 (277)
T ss_pred             ecC-CCCcHH
Confidence            999 998875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.70  E-value=4.6e-08  Score=94.05  Aligned_cols=80  Identities=29%  Similarity=0.312  Sum_probs=66.4

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... ++..+|+|.++...   ....+.+..|..++..+ +||||+++++++...+..++||||+ +
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~-~   79 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL-N   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC-C
Confidence            46899999999999874 58899999986532   23345677788888765 8999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|..
T Consensus        80 ~g~L~~   85 (316)
T cd05620          80 GGDLMF   85 (316)
T ss_pred             CCcHHH
Confidence            999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.70  E-value=4.2e-08  Score=93.21  Aligned_cols=81  Identities=33%  Similarity=0.396  Sum_probs=70.3

Q ss_pred             cCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          350 DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ..+||+|+||.||++.. .+++.+++|.+..........+.+|+.+++.++|+||+++++.+...+..++||||+ ++++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~~  103 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL-EGGA  103 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC-CCCc
Confidence            35799999999999987 468899999986544445567899999999999999999999999999999999999 9888


Q ss_pred             ccc
Q 013711          429 NWI  431 (437)
Q Consensus       429 L~l  431 (437)
                      |.-
T Consensus       104 L~~  106 (292)
T cd06657         104 LTD  106 (292)
T ss_pred             HHH
Confidence            753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.70  E-value=4.1e-08  Score=94.74  Aligned_cols=84  Identities=23%  Similarity=0.205  Sum_probs=68.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      |...+.||+|+||.||++... +++.||+|++...   .....+.+..|..++..+. |++|+++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            556788999999999999864 5889999998643   1233456788999998885 5778889999998899999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus        82 y~-~~g~L~~   90 (323)
T cd05615          82 YV-NGGDLMY   90 (323)
T ss_pred             CC-CCCcHHH
Confidence            99 9999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.70  E-value=4.7e-08  Score=94.51  Aligned_cols=80  Identities=20%  Similarity=0.220  Sum_probs=67.6

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.+|+|+++...   ....+.+.+|+.++.++ +|+||+++++++...+..+|||||+ +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~   79 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV-N   79 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC-C
Confidence            36899999999999864 57899999997532   22345688999999888 6999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+.
T Consensus        80 ~~~L~~   85 (327)
T cd05617          80 GGDLMF   85 (327)
T ss_pred             CCcHHH
Confidence            999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.70  E-value=4.9e-08  Score=90.46  Aligned_cols=81  Identities=44%  Similarity=0.672  Sum_probs=70.0

Q ss_pred             CccccccceeEEEEEeCC----CCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPS----GQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+.+|+.++..++|+||+++++++......++|+||+ +
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM-E   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec-c
Confidence            468999999999998743    788999999764333 3678999999999999999999999999999999999999 9


Q ss_pred             CCccccc
Q 013711          426 NKDNWIG  432 (437)
Q Consensus       426 ~gsL~l~  432 (437)
                      +++|.-.
T Consensus        80 ~~~L~~~   86 (262)
T cd00192          80 GGDLLDY   86 (262)
T ss_pred             CCcHHHH
Confidence            9988644

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.70  E-value=5.3e-08  Score=91.08  Aligned_cols=83  Identities=24%  Similarity=0.400  Sum_probs=68.4

Q ss_pred             ccccCccccccceeEEEEEeCC--CCEEEEEEccccC----------ccCHHHHHHHHHHHhc-CCCCCccceEeEEEeC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPS--GQEIAVKRLSKAS----------GQGAEEFKNEVVLVAK-LQHRNLVRLLGFCLEG  413 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~--~~~vAvK~l~~~~----------~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~~  413 (437)
                      |+..+.||+|+||.||++....  +..+|+|.+....          .....++.+|+.++.+ ++|+||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5677899999999999999754  6789999875321          1223567889988875 6999999999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..+++|||+ ++++|.
T Consensus        82 ~~~~lv~e~~-~~~~l~   97 (269)
T cd08528          82 DRLYIVMDLI-EGAPLG   97 (269)
T ss_pred             CeEEEEEecC-CCCcHH
Confidence            9999999999 988875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.70  E-value=5.2e-08  Score=99.97  Aligned_cols=93  Identities=27%  Similarity=0.468  Sum_probs=76.2

Q ss_pred             cchhhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ..++.+..+++-+.+.++||+|.+|.||+++- ++++.+|+|++.... ...++...|..+++.+ .|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            44555566677888999999999999999984 568899999986543 3346778888998888 79999999999865


Q ss_pred             -----CCEeEEEEecccCCCcc
Q 013711          413 -----GEEKILVYEFTLKNKDN  429 (437)
Q Consensus       413 -----~~~~~lv~E~~~~~gsL  429 (437)
                           ++++||||||| .+||.
T Consensus        88 ~~~~~~DqLWLVMEfC-~gGSV  108 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFC-GGGSV  108 (953)
T ss_pred             ecCCCCCeEEEEeecc-CCccH
Confidence                 57899999999 88874

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.69  E-value=3.5e-08  Score=97.17  Aligned_cols=80  Identities=20%  Similarity=0.334  Sum_probs=67.0

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----EeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  417 (437)
                      +|+..++||+|+||.||++.. .+++.||+|.+....  ....+.+.+|+.+++.++|+||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            366788999999999999986 468999999986432  223467889999999999999999999998766     789


Q ss_pred             EEEecccCC
Q 013711          418 LVYEFTLKN  426 (437)
Q Consensus       418 lv~E~~~~~  426 (437)
                      +|+||+ .+
T Consensus        81 lv~e~~-~~   88 (372)
T cd07853          81 VVTELM-QS   88 (372)
T ss_pred             EEeecc-cc
Confidence            999999 53

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.69  E-value=2.7e-08  Score=93.81  Aligned_cols=84  Identities=33%  Similarity=0.530  Sum_probs=70.0

Q ss_pred             cccccCccccccceeEEEEEeC------CCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .|...+.||+|+||.||+|...      .+..||+|.++..... ..+.+.+|+.++..++||||+++++.+...+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4566788999999999999853      2468999999754322 23568899999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ++||+ ++++|.
T Consensus        86 ~~e~~-~~~~l~   96 (283)
T cd05091          86 IFSYC-SHSDLH   96 (283)
T ss_pred             EEEcC-CCCcHH
Confidence            99999 888765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.69  E-value=3.9e-08  Score=91.66  Aligned_cols=85  Identities=18%  Similarity=0.192  Sum_probs=72.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|+..+.||+|+||.||++... +++.+++|.+.... ....+++.+|+.++++++||||+++++.+......++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            4666788999999999999875 58899999987543 234567899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        82 -~~~~L~~   88 (265)
T cd06605          82 -DGGSLDK   88 (265)
T ss_pred             -CCCcHHH
Confidence             8887753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.68  E-value=4.7e-08  Score=94.74  Aligned_cols=82  Identities=21%  Similarity=0.447  Sum_probs=66.0

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----EeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l  418 (437)
                      |...++||+|+||.||++... ++..||+|.+...  .......+.+|+.++++++||||+++++++....     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            566789999999999999864 6899999998642  2233456889999999999999999999886532     4899


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ . ++|.
T Consensus        82 v~e~~-~-~~L~   91 (338)
T cd07859          82 VFELM-E-SDLH   91 (338)
T ss_pred             EEecC-C-CCHH
Confidence            99999 5 4553

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.68  E-value=1.2e-08  Score=102.03  Aligned_cols=79  Identities=25%  Similarity=0.365  Sum_probs=71.4

Q ss_pred             ccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          352 KLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +||+|.||.||-|+.. +...+|||.++....+..+-+..||.+-++|+|.|||+.+|.+.+++..-|.||-+ |||||-
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqV-PGGSLS  660 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQV-PGGSLS  660 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecC-CCCcHH
Confidence            7999999999999864 45678999998877777788999999999999999999999999999999999999 999985


Q ss_pred             c
Q 013711          431 I  431 (437)
Q Consensus       431 l  431 (437)
                      -
T Consensus       661 s  661 (1226)
T KOG4279|consen  661 S  661 (1226)
T ss_pred             H
Confidence            3

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.68  E-value=6.4e-08  Score=91.24  Aligned_cols=82  Identities=30%  Similarity=0.506  Sum_probs=69.6

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +|+..++||+|++|.||++... ++..+++|.++.... ...+.+.+|+.++++++|+||+++++.+...+..+||+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            3667789999999999999974 588999999875432 23466789999999999999999999999999999999999


Q ss_pred             cCCCcc
Q 013711          424 LKNKDN  429 (437)
Q Consensus       424 ~~~gsL  429 (437)
                       ++ +|
T Consensus        81 -~~-~l   84 (284)
T cd07836          81 -DK-DL   84 (284)
T ss_pred             -Cc-cH
Confidence             65 44

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.68  E-value=2.6e-08  Score=94.66  Aligned_cols=84  Identities=30%  Similarity=0.382  Sum_probs=71.5

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.....||+|+||.||++... ++..+|+|.+........+.+.+|+.+++.++|+||+++++.+..++..++||||+ +
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~-~  102 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL-E  102 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC-C
Confidence            344567999999999999864 58899999986544445567899999999999999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +++|.-
T Consensus       103 ~~~L~~  108 (292)
T cd06658         103 GGALTD  108 (292)
T ss_pred             CCcHHH
Confidence            888753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.68  E-value=8.2e-08  Score=90.54  Aligned_cols=81  Identities=32%  Similarity=0.503  Sum_probs=68.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|++|.||++... ++..+++|.++...  ....+.+.+|+.++.+++||||+++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            566788999999999999874 58899999986432  223467889999999999999999999999999999999999


Q ss_pred             cCCCcc
Q 013711          424 LKNKDN  429 (437)
Q Consensus       424 ~~~gsL  429 (437)
                       + ++|
T Consensus        82 -~-~~l   85 (285)
T cd07861          82 -S-MDL   85 (285)
T ss_pred             -C-CCH
Confidence             6 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.68  E-value=4.3e-08  Score=92.29  Aligned_cols=84  Identities=31%  Similarity=0.548  Sum_probs=69.6

Q ss_pred             ccccccCccccccceeEEEEEeCC-CC----EEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-GQ----EIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|...+.||+|+||.||++.... +.    .+++|.+..... ....++.+|+.++.+++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            456778899999999999998642 32    589998865432 334678999999999999999999999987 78899


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      |+||+ ++|+|.
T Consensus        86 v~e~~-~~g~L~   96 (279)
T cd05057          86 ITQLM-PLGCLL   96 (279)
T ss_pred             EEecC-CCCcHH
Confidence            99999 999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.67  E-value=5.5e-08  Score=91.14  Aligned_cols=79  Identities=29%  Similarity=0.556  Sum_probs=65.8

Q ss_pred             CccccccceeEEEEEeCC-CC--EEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~-~~--~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++...+ +.  .+++|.++... ....+.+.+|+.++.++ +||||+++++++......+++|||+ +
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~-~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA-P   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC-C
Confidence            368999999999999744 33  56888886432 23446789999999999 8999999999999999999999999 9


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +|+|.
T Consensus        80 ~~~L~   84 (270)
T cd05047          80 HGNLL   84 (270)
T ss_pred             CCcHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.67  E-value=5.9e-08  Score=93.00  Aligned_cols=80  Identities=25%  Similarity=0.516  Sum_probs=67.6

Q ss_pred             ccccCccccccceeEEEEEeC---CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  418 (437)
                      |...++||+|+||.||++...   .+..+|+|.+....   ....+.+.+|+.++.+++||||+++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            566788999999999999974   47899999997632   33346788999999999999999999999988  78999


Q ss_pred             EEecccCCC
Q 013711          419 VYEFTLKNK  427 (437)
Q Consensus       419 v~E~~~~~g  427 (437)
                      |+||+ ++.
T Consensus        82 v~e~~-~~~   89 (316)
T cd07842          82 LFDYA-EHD   89 (316)
T ss_pred             EEeCC-CcC
Confidence            99999 653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.67  E-value=2.8e-08  Score=92.92  Aligned_cols=79  Identities=39%  Similarity=0.663  Sum_probs=66.7

Q ss_pred             CccccccceeEEEEEeCC-------CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          351 NKLGEGGFGEVYKGVLPS-------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~-------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.||+|+||.||+|...+       +..+++|.+.... ......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998632       2578999886532 23456799999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        81 ~-~~~~L~   87 (269)
T cd05044          81 M-EGGDLL   87 (269)
T ss_pred             c-CCCcHH
Confidence            9 999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.67  E-value=2e-08  Score=97.92  Aligned_cols=88  Identities=26%  Similarity=0.334  Sum_probs=74.6

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      ...+|..++.||+|+|++|++++. ..+.++|||++.+.   .+...+-+..|-.+|..| .||.|++|+-.+.++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            345788899999999999999985 46899999999653   223344577888899999 8999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      .|+||. +||+|+-
T Consensus       151 FvLe~A-~nGdll~  163 (604)
T KOG0592|consen  151 FVLEYA-PNGDLLD  163 (604)
T ss_pred             EEEEec-CCCcHHH
Confidence            999999 9999864

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.66  E-value=8.7e-08  Score=90.39  Aligned_cols=84  Identities=29%  Similarity=0.424  Sum_probs=68.1

Q ss_pred             ccccCccccccceeEEEEEe-----CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  418 (437)
                      +...+.||+|+||.||++.+     .++..||+|.++... ......|.+|+.++++++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            46678999999999988653     357789999987542 23456789999999999999999999988763  46899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      +|||+ ++++|.-
T Consensus        86 v~e~~-~~~~l~~   97 (283)
T cd05080          86 IMEYV-PLGSLRD   97 (283)
T ss_pred             EecCC-CCCCHHH
Confidence            99999 9998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.66  E-value=6.4e-08  Score=89.96  Aligned_cols=77  Identities=31%  Similarity=0.494  Sum_probs=63.7

Q ss_pred             ccccccceeEEEEEe---CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          352 KLGEGGFGEVYKGVL---PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~---~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      +||+|+||.||+|.+   .++..+|+|+++....  ...+++.+|+.+++.++|+||+++++++. .+..++||||+ ++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~-~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELA-EL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecC-CC
Confidence            589999999999975   3468899999864332  23467999999999999999999999875 45678999999 98


Q ss_pred             Cccc
Q 013711          427 KDNW  430 (437)
Q Consensus       427 gsL~  430 (437)
                      |+|.
T Consensus        80 ~~L~   83 (257)
T cd05116          80 GPLN   83 (257)
T ss_pred             CcHH
Confidence            8885

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.65  E-value=4.5e-08  Score=93.64  Aligned_cols=82  Identities=24%  Similarity=0.415  Sum_probs=69.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ..|...+.||+|+||.||++... +++.|++|.+.....   ...+++.+|+.+++.++||||+++.+++...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            44777889999999999999864 588999999864322   23357889999999999999999999999999999999


Q ss_pred             ecccCCC
Q 013711          421 EFTLKNK  427 (437)
Q Consensus       421 E~~~~~g  427 (437)
                      ||+ ++.
T Consensus        95 e~~-~g~  100 (307)
T cd06607          95 EYC-LGS  100 (307)
T ss_pred             Hhh-CCC
Confidence            999 643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.65  E-value=8.8e-08  Score=90.77  Aligned_cols=84  Identities=30%  Similarity=0.425  Sum_probs=70.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +.+|...+.||+|+||.||++... ++..+++|.+..... .....+.+|+.+++.++|+||+++.+++..++..++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            456788899999999999999863 588999999865432 233467899999999999999999999999999999999


Q ss_pred             cccCCCcc
Q 013711          422 FTLKNKDN  429 (437)
Q Consensus       422 ~~~~~gsL  429 (437)
                      |+ + ++|
T Consensus        84 ~~-~-~~l   89 (291)
T cd07870          84 YM-H-TDL   89 (291)
T ss_pred             cc-c-CCH
Confidence            99 6 444

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.65  E-value=9.8e-08  Score=89.17  Aligned_cols=84  Identities=23%  Similarity=0.395  Sum_probs=69.2

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-----cCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-----QGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  417 (437)
                      +|...+.||+|+||.||++... .+..+++|.+.....     +..+.+.+|+.+++.++||||+++++.+..  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            5777899999999999999864 588999998854221     223468899999999999999999998875  35688


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +++||+ ++++|.
T Consensus        83 l~~e~~-~~~~L~   94 (266)
T cd06651          83 IFMEYM-PGGSVK   94 (266)
T ss_pred             EEEeCC-CCCcHH
Confidence            999999 988885

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.65  E-value=2.5e-08  Score=103.98  Aligned_cols=93  Identities=27%  Similarity=0.445  Sum_probs=78.6

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC----C----CCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEe
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP----S----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLG  408 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~----~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g  408 (437)
                      .++...+++.+.+.+|+|.||.|++|.+.    .    ...||||.++... ..+.+.+..|+.+|+.+ +|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            56677777777889999999999999852    1    4579999997643 34567899999999999 7999999999


Q ss_pred             EEEeCCEeEEEEecccCCCccccc
Q 013711          409 FCLEGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       409 ~~~~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +|....+.++|+||+ .+|+|...
T Consensus       370 ~~t~~~~~~~v~Ey~-~~G~L~~~  392 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYA-EHGDLLEF  392 (609)
T ss_pred             eeccCCceEEEEEec-cCCcHHHH
Confidence            999999999999999 99998654

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.65  E-value=6e-08  Score=91.57  Aligned_cols=85  Identities=24%  Similarity=0.351  Sum_probs=72.2

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|+..++||+|+||.||++... +++.|++|.++..  .....+.+.+|++++++++|+||+++++++..++..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            4677889999999999999875 5789999998643  223356789999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + +++.|..
T Consensus        82 ~-~~~~l~~   89 (288)
T cd07833          82 V-ERTLLEL   89 (288)
T ss_pred             C-CCCHHHH
Confidence            9 7766553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.65  E-value=1.2e-07  Score=87.14  Aligned_cols=83  Identities=35%  Similarity=0.565  Sum_probs=73.1

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      |...+.||+|++|.||++... ++..+++|++........+.+.+|+.++++++|+||+++++.+......++++||+ +
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~-~   80 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC-S   80 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC-C
Confidence            556788999999999999975 58899999997655445678999999999999999999999999999999999999 8


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +++|.
T Consensus        81 ~~~L~   85 (253)
T cd05122          81 GGSLK   85 (253)
T ss_pred             CCcHH
Confidence            88875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.65  E-value=4.9e-08  Score=90.56  Aligned_cols=82  Identities=32%  Similarity=0.480  Sum_probs=68.6

Q ss_pred             cccCccccccceeEEEEEeCC-CCEEEEEEccccCccCH--HHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          348 STDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGA--EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~--~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ...+.||+|+||.||++.... ++.+|+|.+........  ....+|+.++.+++||||+++++++......++||||+ 
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~-   80 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC-   80 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE-
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc-
Confidence            456889999999999999754 66899999976543222  23456999999999999999999999999999999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++++|.
T Consensus        81 ~~~~L~   86 (260)
T PF00069_consen   81 PGGSLQ   86 (260)
T ss_dssp             TTEBHH
T ss_pred             cccccc
Confidence            888875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.65  E-value=8.4e-08  Score=91.04  Aligned_cols=83  Identities=28%  Similarity=0.449  Sum_probs=69.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|...+.||+|.+|.||++... +++.+++|.+.....  ...+.+.+|+.++++++|+||+++++++...+..++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            35677889999999999999874 688999999864322  234578899999999999999999999999999999999


Q ss_pred             cccCCCcc
Q 013711          422 FTLKNKDN  429 (437)
Q Consensus       422 ~~~~~gsL  429 (437)
                      |+ ++ +|
T Consensus        82 ~~-~~-~l   87 (294)
T PLN00009         82 YL-DL-DL   87 (294)
T ss_pred             cc-cc-cH
Confidence            99 54 44

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.65  E-value=8.2e-08  Score=92.68  Aligned_cols=80  Identities=21%  Similarity=0.284  Sum_probs=63.5

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHH-HHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.+|+|++....   ......+..|.. +++.++|+||+++++.+...+..++||||+ +
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~-~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI-N   79 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC-C
Confidence            36899999999999864 57889999986422   122334555544 467789999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|+-
T Consensus        80 ~~~L~~   85 (325)
T cd05602          80 GGELFY   85 (325)
T ss_pred             CCcHHH
Confidence            998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.65  E-value=2.1e-08  Score=97.13  Aligned_cols=85  Identities=25%  Similarity=0.320  Sum_probs=72.3

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .-|.+.+.||+|.|..|-.++. -.|+.||||++.+..-  .....+.+|++.|+-++|||||+|+.+...+..+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            3467788999999999887762 4799999999976433  234568899999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      += .+|+||
T Consensus        98 LG-D~GDl~  105 (864)
T KOG4717|consen   98 LG-DGGDLF  105 (864)
T ss_pred             ec-CCchHH
Confidence            98 899986

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.64  E-value=1.1e-07  Score=87.77  Aligned_cols=83  Identities=25%  Similarity=0.433  Sum_probs=71.7

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEEEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  421 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  421 (437)
                      |...+.||+|++|.||+|... ++..+++|.+.....  ...+.+.+|+.++++++|+||+++++.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            556788999999999999975 688999999865432  3457899999999999999999999999988  88999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (260)
T cd06606          82 YV-SGGSLS   89 (260)
T ss_pred             ec-CCCcHH
Confidence            99 888865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.64  E-value=2.6e-08  Score=96.63  Aligned_cols=85  Identities=19%  Similarity=0.261  Sum_probs=71.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE-eEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-KILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lv~  420 (437)
                      ++|...+++|+|+||.++..+.+ ++..+++|.+...  +....+...+|+.++++++|||||.+.+.+..++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            45677889999999999887653 5678999998643  33445578999999999999999999999998887 99999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ +||+|.
T Consensus        84 ~Y~-eGg~l~   92 (426)
T KOG0589|consen   84 EYC-EGGDLA   92 (426)
T ss_pred             eec-CCCCHH
Confidence            999 999975

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.64  E-value=9.5e-08  Score=90.11  Aligned_cols=82  Identities=26%  Similarity=0.400  Sum_probs=70.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |.+.+.||+|+||.||++... ++..+++|.+....  ....+.+.+|+.++++++|+||+++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            566788999999999999864 68899999987543  233467999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                        +++|.
T Consensus        82 --~~~L~   86 (286)
T cd07832          82 --PSDLS   86 (286)
T ss_pred             --CCCHH
Confidence              67765

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.64  E-value=8.2e-08  Score=95.13  Aligned_cols=79  Identities=15%  Similarity=0.191  Sum_probs=67.9

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..+|...+.||+|+||.||++.. ..++.||+|...      .+.+.+|+.++++++|||||++++++......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            35688899999999999999986 458899999753      23578999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + . ++|+
T Consensus       165 ~-~-~~L~  170 (391)
T PHA03212        165 Y-K-TDLY  170 (391)
T ss_pred             C-C-CCHH
Confidence            9 4 5654

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.64  E-value=7.9e-08  Score=91.36  Aligned_cols=82  Identities=28%  Similarity=0.417  Sum_probs=68.7

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc-----CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ-----GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      |...+.||+|+||.||+|... +++.|++|.++.....     ....+..|+.++.+++|+||+++++++...+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            556788999999999999864 5889999999754322     2345788999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+  +|+|.
T Consensus        82 e~~--~~~L~   89 (298)
T cd07841          82 EFM--ETDLE   89 (298)
T ss_pred             ccc--CCCHH
Confidence            999  56663

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.64  E-value=9.8e-08  Score=89.27  Aligned_cols=87  Identities=28%  Similarity=0.403  Sum_probs=72.6

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCC-----
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGE-----  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~-----  414 (437)
                      .++++|...+.||+|++|.||++... +++.+++|.+.... ...+.+.+|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            35678889999999999999999974 57889999986543 2346789999999999 7999999999997644     


Q ss_pred             -EeEEEEecccCCCccc
Q 013711          415 -EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 -~~~lv~E~~~~~gsL~  430 (437)
                       ..++||||+ ++++|.
T Consensus        82 ~~~~lv~e~~-~~~~L~   97 (275)
T cd06608          82 DQLWLVMELC-GGGSVT   97 (275)
T ss_pred             eEEEEEEEcC-CCCcHH
Confidence             489999999 888764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.64  E-value=6.4e-08  Score=91.28  Aligned_cols=80  Identities=30%  Similarity=0.511  Sum_probs=67.9

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|+..+.||+|++|.||++... ++..+++|.+....  ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            3667788999999999999864 58899999986432  22345789999999999999999999999999999999999


Q ss_pred             ccCC
Q 013711          423 TLKN  426 (437)
Q Consensus       423 ~~~~  426 (437)
                      + ++
T Consensus        81 ~-~~   83 (284)
T cd07860          81 L-HQ   83 (284)
T ss_pred             c-cc
Confidence            9 53

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.63  E-value=1.2e-07  Score=88.42  Aligned_cols=85  Identities=24%  Similarity=0.398  Sum_probs=69.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc-----CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-----SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  416 (437)
                      .+|...+.||+|+||.||++.. .++..+++|.+...     ..+..+.+.+|+.++++++|+||+++++++...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4577889999999999999986 45889999987532     122345788999999999999999999988764  458


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++++||+ ++++|.
T Consensus        82 ~~v~e~~-~~~~L~   94 (264)
T cd06653          82 SIFVEYM-PGGSIK   94 (264)
T ss_pred             EEEEEeC-CCCcHH
Confidence            8999999 988874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.63  E-value=1e-08  Score=93.78  Aligned_cols=82  Identities=27%  Similarity=0.398  Sum_probs=73.5

Q ss_pred             cCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          350 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .++||+|+|+.|-.++ +.+|.++|||++.+.....+....+|++++..- .|+||++|+.++.+++..|||||=| .||
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm-~GG  161 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM-RGG  161 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc-cCc
Confidence            4689999999999887 578999999999877666778899999999888 6999999999999999999999999 999


Q ss_pred             ccccc
Q 013711          428 DNWIG  432 (437)
Q Consensus       428 sL~l~  432 (437)
                      .|+-+
T Consensus       162 plLsh  166 (463)
T KOG0607|consen  162 PLLSH  166 (463)
T ss_pred             hHHHH
Confidence            98643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.63  E-value=5.3e-08  Score=90.30  Aligned_cols=81  Identities=36%  Similarity=0.587  Sum_probs=68.6

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      .+|...+.||+|+||.||++.. .++.+++|.++...  ..+.+.+|+.++.+++||||+++++++.. +..+++|||+ 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~-   80 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELM-   80 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECC-
Confidence            4577789999999999999986 67889999986432  34678999999999999999999998865 4579999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++++|.
T Consensus        81 ~~~~L~   86 (254)
T cd05083          81 SKGNLV   86 (254)
T ss_pred             CCCCHH
Confidence            998885

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.63  E-value=8.6e-08  Score=88.99  Aligned_cols=82  Identities=29%  Similarity=0.482  Sum_probs=69.2

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E~~  423 (437)
                      .+|...+.||+|+||.||++.. .+..+++|.++..  ...+.+.+|+.++++++|+|++++++++.. .+..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            4577788999999999999987 5788999998643  235679999999999999999999997654 45689999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        83 -~~~~L~   88 (256)
T cd05082          83 -AKGSLV   88 (256)
T ss_pred             -CCCcHH
Confidence             988875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.63  E-value=1.5e-07  Score=86.87  Aligned_cols=83  Identities=25%  Similarity=0.488  Sum_probs=71.8

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|.+|.||++... +++.+++|.+.....  ...+.+.+|++++.+++|+|++++++++...+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            566789999999999999864 578999999976433  34567999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (254)
T cd06627          82 -ENGSLR   87 (254)
T ss_pred             -CCCcHH
Confidence             888774

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.62  E-value=1e-07  Score=90.20  Aligned_cols=84  Identities=24%  Similarity=0.298  Sum_probs=70.3

Q ss_pred             ccccCccccccceeEEEEEe----CCCCEEEEEEccccCc----cCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKASG----QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      |+..+.||+|+||.||++..    .+|..+|+|+++....    ...+.+.+|+.++.++ +|+||+++.+++..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56678999999999999985    3688999999865321    2345688999999999 6999999999999888999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +|+||+ ++++|+-
T Consensus        82 lv~e~~-~~~~L~~   94 (290)
T cd05613          82 LILDYI-NGGELFT   94 (290)
T ss_pred             EEEecC-CCCcHHH
Confidence            999999 9998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.62  E-value=6.3e-08  Score=90.18  Aligned_cols=78  Identities=31%  Similarity=0.484  Sum_probs=66.0

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCC-ccceEeEEEeCC------E
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRN-LVRLLGFCLEGE------E  415 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~------~  415 (437)
                      .|...++||+|.||.||+|.. .+|+.||+|.+.....  .....-.+|+.++++|+|+| ||+|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            455667899999999999985 4689999999975433  23456789999999999999 999999999877      7


Q ss_pred             eEEEEecc
Q 013711          416 KILVYEFT  423 (437)
Q Consensus       416 ~~lv~E~~  423 (437)
                      ++||+||+
T Consensus        92 l~lvfe~~   99 (323)
T KOG0594|consen   92 LYLVFEFL   99 (323)
T ss_pred             EEEEEEee
Confidence            89999998

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.62  E-value=1.3e-07  Score=88.97  Aligned_cols=77  Identities=30%  Similarity=0.387  Sum_probs=65.4

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++... +++.+++|.+....   ....+.+.+|+++++.++||||+++.+.+...+..++|+||+ ++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~-~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM-NGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC-CCCc
Confidence            689999999999854 58899999986432   223446788999999999999999999999999999999999 9988


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |.
T Consensus        80 L~   81 (277)
T cd05577          80 LK   81 (277)
T ss_pred             HH
Confidence            85

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.61  E-value=1e-07  Score=89.80  Aligned_cols=84  Identities=31%  Similarity=0.517  Sum_probs=66.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCC----EEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|...+.||+|+||.||++.+. ++.    .+++|.+..... ...+++..|+..+.+++||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            35667789999999999999863 344    477888754322 23467888898999999999999999875 455789


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ++||+ ++|+|.
T Consensus        86 i~e~~-~~gsL~   96 (279)
T cd05111          86 VTQLS-PLGSLL   96 (279)
T ss_pred             EEEeC-CCCcHH
Confidence            99999 999986

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.61  E-value=1.1e-07  Score=91.57  Aligned_cols=79  Identities=24%  Similarity=0.433  Sum_probs=67.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |...+.||+|+||.||++... ++..+++|.+.....   .....+.+|+.++++++|+|++++++++.+.+..++|+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            566788999999999999864 588999999864322   2235788999999999999999999999999999999999


Q ss_pred             ccCC
Q 013711          423 TLKN  426 (437)
Q Consensus       423 ~~~~  426 (437)
                      + ++
T Consensus       107 ~-~g  109 (317)
T cd06635         107 C-LG  109 (317)
T ss_pred             C-CC
Confidence            9 65

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.61  E-value=1e-07  Score=88.72  Aligned_cols=79  Identities=32%  Similarity=0.555  Sum_probs=63.8

Q ss_pred             CccccccceeEEEEEeC----CCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEEEEeccc
Q 013711          351 NKLGEGGFGEVYKGVLP----SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEFTL  424 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E~~~  424 (437)
                      +.||+|+||.||+|...    ....+|+|.+... .....+.+.+|+.+++.++||||+++++.+.. +...++++||+ 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~-   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM-   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC-
Confidence            46899999999999853    2357999998543 22345678899999999999999999998764 55688999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++|+|.
T Consensus        80 ~~~~L~   85 (262)
T cd05058          80 KHGDLR   85 (262)
T ss_pred             CCCCHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.61  E-value=1.6e-07  Score=88.92  Aligned_cols=83  Identities=31%  Similarity=0.407  Sum_probs=71.4

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +...+.||+|++|.||++.. .++..+++|.+........+.+.+|+.+++.++|+||+++++++...+..++++||+ +
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~-~   99 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL-E   99 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc-C
Confidence            44457899999999999985 468899999986554445567899999999999999999999999999999999999 9


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +++|.
T Consensus       100 ~~~L~  104 (285)
T cd06648         100 GGALT  104 (285)
T ss_pred             CCCHH
Confidence            88875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.61  E-value=1e-07  Score=90.82  Aligned_cols=84  Identities=26%  Similarity=0.465  Sum_probs=69.3

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----  414 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----  414 (437)
                      ..++|++.+.||+|+||.||+|... +++.|++|.++...  ......+.+|+.++++++||||+++++++.+.+     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4567888899999999999999975 58899999986532  223456788999999999999999999987654     


Q ss_pred             -----EeEEEEecccCCC
Q 013711          415 -----EKILVYEFTLKNK  427 (437)
Q Consensus       415 -----~~~lv~E~~~~~g  427 (437)
                           ..+||+||+ ++.
T Consensus        85 ~~~~~~~~lv~e~~-~~~  101 (302)
T cd07864          85 KKDKGAFYLVFEYM-DHD  101 (302)
T ss_pred             cccCCcEEEEEccc-Ccc
Confidence                 789999999 653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.61  E-value=1.7e-07  Score=86.56  Aligned_cols=83  Identities=24%  Similarity=0.377  Sum_probs=72.0

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|+||.||++... ++..+++|.+.....  ...+++.+|+++++.++|+|++++.+.+...+..++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            566788999999999999974 588999999875432  44567899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        82 -~~~~L~   87 (258)
T cd08215          82 -DGGDLS   87 (258)
T ss_pred             -CCCcHH
Confidence             888875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.60  E-value=1.1e-07  Score=89.70  Aligned_cols=94  Identities=28%  Similarity=0.437  Sum_probs=75.1

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEe-
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE-  412 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-  412 (437)
                      +..++..+.+.|+..+.||+|+||.||++.. ..++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            3444555667788889999999999999986 457899999885432 2345688999999998 79999999999863 


Q ss_pred             -----CCEeEEEEecccCCCcccc
Q 013711          413 -----GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 -----~~~~~lv~E~~~~~gsL~l  431 (437)
                           .+..+++|||+ ++|+|.-
T Consensus        86 ~~~~~~~~~~iv~e~~-~~~~L~~  108 (282)
T cd06636          86 SPPGHDDQLWLVMEFC-GAGSVTD  108 (282)
T ss_pred             cccCCCCEEEEEEEeC-CCCcHHH
Confidence                 45789999999 8888753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.59  E-value=1.4e-07  Score=87.83  Aligned_cols=78  Identities=22%  Similarity=0.314  Sum_probs=67.2

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|++|.||++... +++.+++|.+.....   ...+.+.+|+.+++.++|+||+++++.+.++...++++||+ ++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC-LGGE   79 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC-CCCc
Confidence            689999999999974 488999999865322   23467999999999999999999999999999999999999 9999


Q ss_pred             ccc
Q 013711          429 NWI  431 (437)
Q Consensus       429 L~l  431 (437)
                      |.-
T Consensus        80 L~~   82 (262)
T cd05572          80 LWT   82 (262)
T ss_pred             HHH
Confidence            863

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.59  E-value=5.6e-08  Score=91.26  Aligned_cols=84  Identities=24%  Similarity=0.343  Sum_probs=72.0

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +|...+.||+|+||.||++... ++..+++|.+...   .....+.+.+|..++.+++ |+||+++++.+...+..++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            5677889999999999999874 6899999998642   2233467889999999998 999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus        82 e~~-~~~~L~   90 (280)
T cd05581          82 EYA-PNGELL   90 (280)
T ss_pred             cCC-CCCcHH
Confidence            999 999985

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.59  E-value=1.5e-07  Score=87.41  Aligned_cols=78  Identities=40%  Similarity=0.608  Sum_probs=64.1

Q ss_pred             CccccccceeEEEEEeCC----CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPS----GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||+|.+..    +..+++|.+..... ...+++.+|+.+++.+.|+||+++++++. .+..++|+||+ +
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~-~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA-P   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC-C
Confidence            468999999999998532    26899999875443 23467999999999999999999999876 45689999999 8


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +|+|.
T Consensus        79 ~~~L~   83 (257)
T cd05060          79 LGPLL   83 (257)
T ss_pred             CCcHH
Confidence            88875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.59  E-value=8.6e-08  Score=97.90  Aligned_cols=88  Identities=19%  Similarity=0.215  Sum_probs=71.1

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC----
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE----  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----  414 (437)
                      ...++|.+.+.||+|+||.||++.. .+++.||||.+...  +......+.+|+.++..++|+||+++...+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3446788899999999999999985 46899999998643  2334456889999999999999999887665432    


Q ss_pred             ----EeEEEEecccCCCccc
Q 013711          415 ----EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ----~~~lv~E~~~~~gsL~  430 (437)
                          .+++||||+ ++|+|.
T Consensus       109 ~~~~~i~lV~Ey~-~~gsL~  127 (496)
T PTZ00283        109 ENVLMIALVLDYA-NAGDLR  127 (496)
T ss_pred             ccceEEEEEEeCC-CCCcHH
Confidence                368999999 999985

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.58  E-value=9.9e-08  Score=88.65  Aligned_cols=77  Identities=22%  Similarity=0.277  Sum_probs=66.8

Q ss_pred             cccccceeEEEEEeCC-CCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLPS-GQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++.... ++.+++|.+.....   ...+.+.+|+.++.+++|+||+++++.+..+...++++||+ ++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL-PGGD   79 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC-CCCc
Confidence            6899999999999754 89999999865432   34567899999999999999999999999999999999999 8888


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |.
T Consensus        80 L~   81 (265)
T cd05579          80 LA   81 (265)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.57  E-value=1.7e-07  Score=87.00  Aligned_cols=83  Identities=22%  Similarity=0.390  Sum_probs=68.1

Q ss_pred             ccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEEEEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYE  421 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E  421 (437)
                      |...+.||+|+||.||++.. .++..+++|.+...  .....+.+.+|+.++++++|+||+++++.+..  +...++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            56678899999999999985 45789999998643  22334578899999999999999999997764  456899999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        82 ~~-~~~~L~   89 (265)
T cd08217          82 YC-EGGDLA   89 (265)
T ss_pred             hc-cCCCHH
Confidence            99 988874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.57  E-value=1.7e-07  Score=91.82  Aligned_cols=83  Identities=25%  Similarity=0.397  Sum_probs=67.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      .++|...+.||+|+||.||++... .+..+|+|.+...  .......+.+|+.+++.++||||+++++++...+      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            356888899999999999999863 5889999998643  2233467889999999999999999999886543      


Q ss_pred             EeEEEEecccCCC
Q 013711          415 EKILVYEFTLKNK  427 (437)
Q Consensus       415 ~~~lv~E~~~~~g  427 (437)
                      ..++||||+ +++
T Consensus       100 ~~~lv~e~~-~~~  111 (359)
T cd07876         100 DVYLVMELM-DAN  111 (359)
T ss_pred             eeEEEEeCC-CcC
Confidence            579999999 654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.56  E-value=8.7e-08  Score=96.96  Aligned_cols=87  Identities=21%  Similarity=0.405  Sum_probs=63.3

Q ss_pred             hcccccccCccccccceeEEEEEe-----------------CCCCEEEEEEccccCccCHHH--------------HHHH
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-----------------PSGQEIAVKRLSKASGQGAEE--------------FKNE  391 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-----------------~~~~~vAvK~l~~~~~~~~~~--------------~~~E  391 (437)
                      ..++|.+.++||+|+||.||+|..                 ..++.||||++........++              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            456789999999999999999964                 234679999986543222233              3446


Q ss_pred             HHHHhcCCCCCc-----cceEeEEEe--------CCEeEEEEecccCCCccc
Q 013711          392 VVLVAKLQHRNL-----VRLLGFCLE--------GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       392 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~E~~~~~gsL~  430 (437)
                      +.++.+++|.++     ++++++|..        .+..+|||||+ ++|+|.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~-~~gsL~  273 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFE-SDATLG  273 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcC-CCCcHH
Confidence            777777766654     677777753        35689999999 998884

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.56  E-value=1.8e-07  Score=88.21  Aligned_cols=82  Identities=27%  Similarity=0.438  Sum_probs=68.4

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEEEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILVYE  421 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  421 (437)
                      |...+.||+|+||.||++... +++.+++|.+....  ....+.+.+|+.++++++|+||+++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            345678999999999999875 47899999997643  23346788999999999999999999999887  78999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++ +|.
T Consensus        81 ~~-~~-~l~   87 (287)
T cd07840          81 YM-DH-DLT   87 (287)
T ss_pred             cc-cc-cHH
Confidence            99 64 443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1e-08  Score=107.55  Aligned_cols=95  Identities=19%  Similarity=0.177  Sum_probs=80.2

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      ..+++...++|.+.++||+|+||.|...+.. .++.+|+|++.+.   .+....-|..|-.+|..-..++||+|.-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            3456677788999999999999999999874 4788899999762   22334458888999998899999999999999


Q ss_pred             CCEeEEEEecccCCCccccc
Q 013711          413 GEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +.++||||||| +||+|.-+
T Consensus       147 ~~~LYlVMdY~-pGGDlltL  165 (1317)
T KOG0612|consen  147 ERYLYLVMDYM-PGGDLLTL  165 (1317)
T ss_pred             ccceEEEEecc-cCchHHHH
Confidence            99999999999 99998754

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.56  E-value=1.8e-07  Score=90.42  Aligned_cols=86  Identities=27%  Similarity=0.378  Sum_probs=70.2

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKI  417 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~  417 (437)
                      ..+++|...+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.++..++||||+++.+++.. ....+
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            45677888999999999999999854 6889999988542  22335678899999999999999999998876 56789


Q ss_pred             EEEecccCCCcc
Q 013711          418 LVYEFTLKNKDN  429 (437)
Q Consensus       418 lv~E~~~~~gsL  429 (437)
                      +++||+ . ++|
T Consensus        87 lv~e~~-~-~~L   96 (328)
T cd07856          87 FVTELL-G-TDL   96 (328)
T ss_pred             EEeehh-c-cCH
Confidence            999999 4 454

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.55  E-value=1.8e-07  Score=88.05  Aligned_cols=82  Identities=18%  Similarity=0.259  Sum_probs=65.6

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHH-HhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVL-VAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +|...+.||+|+||.||++... +|+.||+|+++... .....++..|+.+ ++.++||||+++++++......++++||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            5677889999999999999874 58999999986532 2233456667665 5566899999999999999999999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      + + |+|
T Consensus        82 ~-~-~~l   86 (283)
T cd06617          82 M-D-TSL   86 (283)
T ss_pred             h-c-ccH
Confidence            9 5 444

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.55  E-value=2.5e-07  Score=88.80  Aligned_cols=79  Identities=27%  Similarity=0.452  Sum_probs=66.3

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +...++||+|+||.||+|... ++..+++|.+.....   ...+.+.+|+.+++.++|+|++++.+++.+.+..++|+||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            445577999999999999863 588999999864322   2235688999999999999999999999999999999999


Q ss_pred             ccCC
Q 013711          423 TLKN  426 (437)
Q Consensus       423 ~~~~  426 (437)
                      + ++
T Consensus       103 ~-~~  105 (313)
T cd06633         103 C-LG  105 (313)
T ss_pred             C-CC
Confidence            9 64

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.54  E-value=1.9e-07  Score=87.37  Aligned_cols=83  Identities=31%  Similarity=0.503  Sum_probs=66.2

Q ss_pred             ccccCccccccceeEEEEEeC----CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      |...+.||+|+||.||++.+.    .++.+|+|.+....  ....+++.+|+.+++.++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345678999999999999853    36789999986532  233567899999999999999999999886532      


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++++||+ ++|+|.
T Consensus        81 ~~~~~~~~~-~~~~l~   95 (273)
T cd05074          81 IPMVILPFM-KHGDLH   95 (273)
T ss_pred             ceEEEEecC-CCCcHH
Confidence            247889999 999874

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.54  E-value=1.7e-07  Score=88.21  Aligned_cols=85  Identities=29%  Similarity=0.500  Sum_probs=68.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCC----EEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQ----EIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++|...++||+|+||.||+|.+ .++.    .||+|.+.... ....+++.+|+.++..++|+||+++++.+.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            4577789999999999999985 3444    48999986533 2335678999999999999999999998875 45789


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ++||+ ++|+|+-
T Consensus        86 ~~~~~-~~g~l~~   97 (279)
T cd05109          86 VTQLM-PYGCLLD   97 (279)
T ss_pred             EEEcC-CCCCHHH
Confidence            99999 9998753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.54  E-value=2.2e-07  Score=88.15  Aligned_cols=83  Identities=24%  Similarity=0.411  Sum_probs=68.4

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  419 (437)
                      ++|...+.||+|+||.||++... ++..+++|.++....  .....+.+|+.++.+++||||+++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            45777889999999999999975 578999999864332  2234577899999999999999999998887  889999


Q ss_pred             EecccCCCcc
Q 013711          420 YEFTLKNKDN  429 (437)
Q Consensus       420 ~E~~~~~gsL  429 (437)
                      +||+ ++ +|
T Consensus        85 ~e~~-~~-~L   92 (293)
T cd07843          85 MEYV-EH-DL   92 (293)
T ss_pred             ehhc-Cc-CH
Confidence            9999 63 54

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.54  E-value=2.7e-07  Score=88.60  Aligned_cols=76  Identities=24%  Similarity=0.452  Sum_probs=61.4

Q ss_pred             cCccccccceeEEEEEeC---CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEEEEeccc
Q 013711          350 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYEFTL  424 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E~~~  424 (437)
                      ..+||+|+||.||++...   ++..+|+|.+....  ....+.+|+.++++++||||+++++.+..  ....++++||+ 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence            468999999999999854   45789999986432  23567899999999999999999998865  45689999999 


Q ss_pred             CCCcc
Q 013711          425 KNKDN  429 (437)
Q Consensus       425 ~~gsL  429 (437)
                      .+ +|
T Consensus        83 ~~-~l   86 (317)
T cd07868          83 EH-DL   86 (317)
T ss_pred             CC-CH
Confidence            53 44

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.54  E-value=2.2e-07  Score=87.53  Aligned_cols=82  Identities=30%  Similarity=0.476  Sum_probs=68.3

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |+..+.||+|.+|.||++... +|..+++|++....  ....+.+.+|+.++++++|+||+++++++.+++..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            345678999999999999864 68999999986432  223457889999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       + ++|.
T Consensus        81 -~-~~l~   85 (283)
T cd07835          81 -D-LDLK   85 (283)
T ss_pred             -C-cCHH
Confidence             5 4544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.53  E-value=2.2e-07  Score=93.67  Aligned_cols=78  Identities=24%  Similarity=0.272  Sum_probs=65.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .+|.+.+.||+|+||.||++... .++.||||....      ..+.+|+.++++++|+|||++++++..++..+||||++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            35778889999999999999875 478899996422      34678999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       . ++|+
T Consensus       243 -~-~~L~  247 (461)
T PHA03211        243 -R-SDLY  247 (461)
T ss_pred             -C-CCHH
Confidence             4 5554

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.53  E-value=1.7e-07  Score=89.45  Aligned_cols=84  Identities=35%  Similarity=0.622  Sum_probs=66.7

Q ss_pred             ccccccCccccccceeEEEEEeC-CCC----EEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|...+.||+|+||.||++... ++.    .+|+|.+..... ....++.+|+.+++.++||||+++++.+... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            45667789999999999999863 343    578898865332 2234789999999999999999999998754 4678


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ++||+ ++|+|.
T Consensus        86 v~e~~-~~g~l~   96 (303)
T cd05110          86 VTQLM-PHGCLL   96 (303)
T ss_pred             eehhc-CCCCHH
Confidence            99999 988875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.52  E-value=2.6e-07  Score=93.06  Aligned_cols=80  Identities=21%  Similarity=0.434  Sum_probs=63.7

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--------
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--------  413 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------  413 (437)
                      ....|...+.||+|+||.||++.. ..++.||||.+....    ....+|+.+|+.++|||||++.+++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            345688899999999999999986 458899999885422    2345799999999999999998876432        


Q ss_pred             CEeEEEEecccCCC
Q 013711          414 EEKILVYEFTLKNK  427 (437)
Q Consensus       414 ~~~~lv~E~~~~~g  427 (437)
                      ..+++||||+ +++
T Consensus       140 ~~l~lvmE~~-~~~  152 (440)
T PTZ00036        140 IFLNVVMEFI-PQT  152 (440)
T ss_pred             eEEEEEEecC-Ccc
Confidence            2467999999 653

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.52  E-value=1.8e-07  Score=88.54  Aligned_cols=84  Identities=23%  Similarity=0.304  Sum_probs=69.6

Q ss_pred             ccccCccccccceeEEEEEe----CCCCEEEEEEccccC----ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          347 FSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      |...+.||+|+||.||++..    .++..+|||.++...    ....+.+.+|+.++.++ +|+||+++.+.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            55678899999999999874    356889999986432    12345688999999999 6999999999999889999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++|+|+-
T Consensus        82 lv~e~~-~~~~L~~   94 (288)
T cd05583          82 LILDYV-NGGELFT   94 (288)
T ss_pred             EEEecC-CCCcHHH
Confidence            999999 9998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.52  E-value=2.7e-07  Score=85.52  Aligned_cols=83  Identities=20%  Similarity=0.305  Sum_probs=68.4

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E~  422 (437)
                      |...+.||+|++|.||++... +++.+++|.+....  ....+.+.+|+.++++++|+|++++.+.+.. ....++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            667789999999999999864 47889999986432  2345678999999999999999999987764 4468999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        82 ~-~~~~l~   88 (257)
T cd08223          82 C-EGGDLY   88 (257)
T ss_pred             c-CCCcHH
Confidence            9 999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.52  E-value=2.8e-07  Score=89.33  Aligned_cols=80  Identities=24%  Similarity=0.363  Sum_probs=65.5

Q ss_pred             ccCccccccceeEEEEEeC-CCCEEEEEEccccCccC--------------HHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          349 TDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQG--------------AEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      ..+.||+|+||.||++... .++.||+|.+.......              ...+.+|+.+++.++|+||+++++++...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            4577999999999999864 58899999986432111              12578999999999999999999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..++||||+ + |+|.
T Consensus        93 ~~~~lv~e~~-~-~~l~  107 (335)
T PTZ00024         93 DFINLVMDIM-A-SDLK  107 (335)
T ss_pred             CcEEEEEecc-c-cCHH
Confidence            9999999999 6 4554

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.51  E-value=2.8e-07  Score=89.07  Aligned_cols=80  Identities=20%  Similarity=0.281  Sum_probs=66.6

Q ss_pred             Cccccc--cceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEG--GFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G--~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ..||+|  +||.||++.. ..++.||+|.+....  ....+.+.+|+.++..++||||+++++++..++..++|+||+ +
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~-~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFM-A   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecc-c
Confidence            456666  8999999986 468999999986432  223467889999999999999999999999999999999999 8


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +++|.-
T Consensus        83 ~~~l~~   88 (328)
T cd08226          83 YGSANS   88 (328)
T ss_pred             CCCHHH
Confidence            888764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.51  E-value=4.4e-07  Score=85.88  Aligned_cols=82  Identities=28%  Similarity=0.486  Sum_probs=62.1

Q ss_pred             cccccCccccccceeEEEEEe-C-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcC---CCCCccceEeEEEe-----C
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-P-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL---QHRNLVRLLGFCLE-----G  413 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~-----~  413 (437)
                      +|...+.||+|+||.||++.. . ++..||+|.++...  ......+.+|+.+++.+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            467788999999999999985 2 46789999986432  22234567787777665   69999999998853     3


Q ss_pred             CEeEEEEecccCCCcc
Q 013711          414 EEKILVYEFTLKNKDN  429 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL  429 (437)
                      ...++|+||+ + ++|
T Consensus        82 ~~~~lv~e~~-~-~~l   95 (290)
T cd07862          82 TKLTLVFEHV-D-QDL   95 (290)
T ss_pred             CcEEEEEccC-C-CCH
Confidence            4689999999 5 444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.50  E-value=1.7e-07  Score=86.69  Aligned_cols=84  Identities=29%  Similarity=0.396  Sum_probs=71.3

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |+..++||+|+||.||++... +++.+++|.+....  .....++.+|+.++++++|+||+++.+.+......++|+||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            566788999999999999753 67899999986432  233567889999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++++|.-
T Consensus        82 -~~~~L~~   88 (256)
T cd08530          82 -PFGDLSK   88 (256)
T ss_pred             -CCCCHHH
Confidence             9988753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.50  E-value=4.1e-07  Score=82.13  Aligned_cols=82  Identities=38%  Similarity=0.578  Sum_probs=71.4

Q ss_pred             cccCccccccceeEEEEEeCC-CCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          348 STDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ...+.||+|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+.+++|+|++++++.+......++++||+ +
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~   80 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC-E   80 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc-C
Confidence            456789999999999999865 789999999765443 5678999999999999999999999999889999999999 8


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +++|.
T Consensus        81 ~~~L~   85 (225)
T smart00221       81 GGDLF   85 (225)
T ss_pred             CCCHH
Confidence            87765

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.50  E-value=3.7e-07  Score=87.58  Aligned_cols=74  Identities=24%  Similarity=0.455  Sum_probs=60.6

Q ss_pred             cCccccccceeEEEEEeC---CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEEEEeccc
Q 013711          350 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVYEFTL  424 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E~~~  424 (437)
                      ..+||+|+||.||++...   .+..+|+|.+....  ....+.+|+.++++++||||+++++++..  ....++|+||+ 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-   82 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA-   82 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee-
Confidence            357999999999999864   35789999886432  23467899999999999999999998854  45789999999 


Q ss_pred             CC
Q 013711          425 KN  426 (437)
Q Consensus       425 ~~  426 (437)
                      ++
T Consensus        83 ~~   84 (317)
T cd07867          83 EH   84 (317)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.49  E-value=1.5e-07  Score=88.73  Aligned_cols=81  Identities=27%  Similarity=0.471  Sum_probs=67.7

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.||+|+||.||++... +|..+++|.++...  ......+.+|+.++++++|+||+++++++.+....++|+||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            556788999999999999874 58899999986432  222356788999999999999999999999999999999999


Q ss_pred             cCCCcc
Q 013711          424 LKNKDN  429 (437)
Q Consensus       424 ~~~gsL  429 (437)
                       ++ +|
T Consensus        82 -~~-~l   85 (284)
T cd07839          82 -DQ-DL   85 (284)
T ss_pred             -CC-CH
Confidence             64 44

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.49  E-value=3.7e-07  Score=86.55  Aligned_cols=82  Identities=28%  Similarity=0.400  Sum_probs=66.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCE-----e
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE-----K  416 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~-----~  416 (437)
                      +|+..+.||+|+||.||++... +++.||+|.++....  .....+.+|+.+++.+ +|+||+++++++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            5677889999999999999864 588999998865322  2345788999999999 56999999999887665     8


Q ss_pred             EEEEecccCCCcc
Q 013711          417 ILVYEFTLKNKDN  429 (437)
Q Consensus       417 ~lv~E~~~~~gsL  429 (437)
                      ++||||+ ++ +|
T Consensus        82 ~lv~e~~-~~-~l   92 (295)
T cd07837          82 YLVFEYL-DS-DL   92 (295)
T ss_pred             EEEeecc-Cc-CH
Confidence            9999999 64 44

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.49  E-value=4.5e-07  Score=86.74  Aligned_cols=82  Identities=27%  Similarity=0.446  Sum_probs=66.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  418 (437)
                      .++|...+.||+|+||.||++... +|+.||+|.++....  .....+.+|+.++.+++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            456888899999999999999874 589999999864322  1233567899999999999999999998764  56899


Q ss_pred             EEecccCC
Q 013711          419 VYEFTLKN  426 (437)
Q Consensus       419 v~E~~~~~  426 (437)
                      |+||+ .+
T Consensus        86 v~e~~-~~   92 (309)
T cd07845          86 VMEYC-EQ   92 (309)
T ss_pred             EEecC-CC
Confidence            99999 54

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.49  E-value=4e-07  Score=89.37  Aligned_cols=83  Identities=22%  Similarity=0.371  Sum_probs=67.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .++|...+.||+|+||.||++... .++.+|||.+...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            356888899999999999999853 5889999998653  223346788999999999999999999987543      3


Q ss_pred             EeEEEEecccCCC
Q 013711          415 EKILVYEFTLKNK  427 (437)
Q Consensus       415 ~~~lv~E~~~~~g  427 (437)
                      ..++||||+ +++
T Consensus       103 ~~~lv~e~~-~~~  114 (364)
T cd07875         103 DVYIVMELM-DAN  114 (364)
T ss_pred             eEEEEEeCC-CCC
Confidence            579999999 653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.48  E-value=3.6e-07  Score=88.36  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=62.0

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC---CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL---QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ||+|+||.||++... +++.+|+|++....   ......+..|..++..+   +||||+++...+...+..++||||+ +
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~-~   79 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM-S   79 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC-C
Confidence            699999999999864 58899999986421   12233456677776655   6999999999999999999999999 9


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                      +|+|+
T Consensus        80 ~g~L~   84 (330)
T cd05586          80 GGELF   84 (330)
T ss_pred             CChHH
Confidence            99985

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.48  E-value=1.2e-08  Score=100.83  Aligned_cols=84  Identities=25%  Similarity=0.379  Sum_probs=71.7

Q ss_pred             ccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.+.+...||.|+||.||++..+. +...|.|.+...+....++|+-||+||..-+||+||+|++.+...+.+||+.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            344555678999999999998754 4455788887777778899999999999999999999999999999999999999


Q ss_pred             cCCCcc
Q 013711          424 LKNKDN  429 (437)
Q Consensus       424 ~~~gsL  429 (437)
                       +||..
T Consensus       112 -~GGAV  116 (1187)
T KOG0579|consen  112 -GGGAV  116 (1187)
T ss_pred             -CCchH
Confidence             88864

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.47  E-value=4e-07  Score=89.17  Aligned_cols=79  Identities=18%  Similarity=0.276  Sum_probs=66.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ..+|...+.||+|+||.||++... .+..||+|.....      ....|+.++++++|+||+++++++......++|+||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            456888999999999999999874 4678999975432      235699999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + . ++|+
T Consensus       139 ~-~-~~l~  144 (357)
T PHA03209        139 Y-S-SDLY  144 (357)
T ss_pred             c-C-CcHH
Confidence            9 5 4544

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.47  E-value=2.6e-08  Score=88.15  Aligned_cols=89  Identities=26%  Similarity=0.328  Sum_probs=76.7

Q ss_pred             HhhcccccccCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----C
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----E  414 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~  414 (437)
                      .+..+.|.+.+.+|+|+|..||.++ +.++..+|+|++.-.+.++.+..++|++..++++||||++++.+...+     .
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            3455678889999999999999998 567899999999877777788899999999999999999999877543     4


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      +.||++.|+ ..|+|+
T Consensus        97 ~~yll~Pyy-~~Gsl~  111 (302)
T KOG2345|consen   97 EAYLLLPYY-KRGSLL  111 (302)
T ss_pred             eEEEEeehh-ccccHH
Confidence            599999999 999874

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.47  E-value=3.4e-07  Score=87.64  Aligned_cols=82  Identities=28%  Similarity=0.436  Sum_probs=67.8

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .|...+.||+|+||.||+|... ++..+++|.+...   .....+++.+|+.+++.++|+|++++.+++...+..++|+|
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            3566678999999999999864 5788999988642   22234568899999999999999999999999999999999


Q ss_pred             cccCCCcc
Q 013711          422 FTLKNKDN  429 (437)
Q Consensus       422 ~~~~~gsL  429 (437)
                      |+ .+ +|
T Consensus        96 ~~-~~-~l  101 (308)
T cd06634          96 YC-LG-SA  101 (308)
T ss_pred             cc-CC-CH
Confidence            99 64 44

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.46  E-value=8.4e-08  Score=88.08  Aligned_cols=91  Identities=20%  Similarity=0.200  Sum_probs=75.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|+..++||+|.||+|..++- ..++.+|+|++++.--   .....-+.|-++|..-+||.+..|...+...+.++.||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            5677889999999999999975 4689999999976422   22334567999999999999999998899999999999


Q ss_pred             ecccCCCccccccCCC
Q 013711          421 EFTLKNKDNWIGQDVT  436 (437)
Q Consensus       421 E~~~~~gsL~l~~~~~  436 (437)
                      ||. .||+||....+.
T Consensus       248 eya-nGGeLf~HLsre  262 (516)
T KOG0690|consen  248 EYA-NGGELFFHLSRE  262 (516)
T ss_pred             EEc-cCceEeeehhhh
Confidence            999 999999875543

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.46  E-value=1.7e-07  Score=87.16  Aligned_cols=84  Identities=24%  Similarity=0.343  Sum_probs=66.2

Q ss_pred             ccccCccccccceeEEEEEeCC-CCEEEEEEcccc-----CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKA-----SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      |.+.+.||+|+||.||++.... +..+++|.++..     .......+..|+.++++++||||+++++.+.+.+..++|+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            5667899999999999998643 444555555431     1223345778999999999999999999999989999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|..
T Consensus        82 e~~-~~~~l~~   91 (260)
T cd08222          82 EYC-EGRDLDC   91 (260)
T ss_pred             EeC-CCCCHHH
Confidence            999 9988863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.45  E-value=3.7e-07  Score=89.24  Aligned_cols=83  Identities=23%  Similarity=0.368  Sum_probs=67.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .++|...+.||+|+||.||++... .++.+|+|.+....  ....+.+.+|+.+++.++||||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            457888899999999999999853 58899999986532  22345788999999999999999999988653      3


Q ss_pred             EeEEEEecccCCC
Q 013711          415 EKILVYEFTLKNK  427 (437)
Q Consensus       415 ~~~lv~E~~~~~g  427 (437)
                      ..++||||+ +++
T Consensus        96 ~~~lv~e~~-~~~  107 (355)
T cd07874          96 DVYLVMELM-DAN  107 (355)
T ss_pred             eeEEEhhhh-ccc
Confidence            579999999 654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.44  E-value=2.7e-08  Score=99.15  Aligned_cols=89  Identities=21%  Similarity=0.344  Sum_probs=78.2

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +.++|.....+|.|.||.|||++. ..++..|+|.++.....+.+....|+-+++.-+|+|||.++|.+...+.+|+.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            456778888999999999999985 4588999999987766677788899999999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      |+ .+|+|.-.
T Consensus        93 yc-gggslQdi  102 (829)
T KOG0576|consen   93 YC-GGGSLQDI  102 (829)
T ss_pred             ec-CCCcccce
Confidence            99 88887543

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.44  E-value=6.7e-07  Score=84.12  Aligned_cols=82  Identities=26%  Similarity=0.399  Sum_probs=64.9

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCC-CCCccceEeEEEeC--CEeEEEEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEG--EEKILVYE  421 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~E  421 (437)
                      |...++||+|+||.||++... ++..+|+|.++... ........+|+.++.++. |+||+++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            345678999999999999864 58899999986532 222234567999999984 99999999999987  88999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++ +|+
T Consensus        81 ~~-~~-~l~   87 (282)
T cd07831          81 LM-DM-NLY   87 (282)
T ss_pred             cC-Cc-cHH
Confidence            99 64 543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.43  E-value=6.5e-07  Score=85.46  Aligned_cols=81  Identities=28%  Similarity=0.470  Sum_probs=65.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-------  414 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-------  414 (437)
                      ++|...++||+|+||.||++... +++.+|+|.+....  ......+.+|+.++++++||||+++++++...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            45778899999999999999864 58899999886432  222345678999999999999999999987654       


Q ss_pred             -EeEEEEecccCC
Q 013711          415 -EKILVYEFTLKN  426 (437)
Q Consensus       415 -~~~lv~E~~~~~  426 (437)
                       ..++|+||+ .+
T Consensus        92 ~~~~lv~e~~-~~  103 (310)
T cd07865          92 GSFYLVFEFC-EH  103 (310)
T ss_pred             ceEEEEEcCC-Cc
Confidence             359999999 54

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=2.3e-07  Score=86.50  Aligned_cols=78  Identities=23%  Similarity=0.408  Sum_probs=65.1

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccc--cCccCHHHHHHHHHHHhcCCCCCccceEeEEEe-----CCEeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-----GEEKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----~~~~~  417 (437)
                      .|...+.||+|+||.|..+.. .+|+.||||.+..  ......+.-.+|+++++.++|+||+.++.....     -+.+|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            344467899999999999986 4689999999963  344456778999999999999999999998876     35799


Q ss_pred             EEEecc
Q 013711          418 LVYEFT  423 (437)
Q Consensus       418 lv~E~~  423 (437)
                      +|+|+|
T Consensus       103 iV~elM  108 (359)
T KOG0660|consen  103 LVFELM  108 (359)
T ss_pred             EehhHH
Confidence            999999

>PRK10345 hypothetical protein; Provisional

Probab=98.43  E-value=7.6e-07  Score=79.87  Aligned_cols=81  Identities=19%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-----CCCCccceEeEEEeCC---E-eE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-----QHRNLVRLLGFCLEGE---E-KI  417 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~  417 (437)
                      +...+.||+|+||.||. .-.++.. +||++........+.+.+|+.+++.+     .||||++++|++.++.   . ..
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            34567899999999996 2223444 68988654444567899999999999     5799999999998863   4 34


Q ss_pred             EEEec--ccCCCccc
Q 013711          418 LVYEF--TLKNKDNW  430 (437)
Q Consensus       418 lv~E~--~~~~gsL~  430 (437)
                      +|+||  + ++|+|.
T Consensus        82 ~I~e~~G~-~~~tL~   95 (210)
T PRK10345         82 VIADFDGK-PSITLT   95 (210)
T ss_pred             EEecCCCC-cchhHH
Confidence            78999  5 578874

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.42  E-value=4.6e-07  Score=87.90  Aligned_cols=85  Identities=27%  Similarity=0.493  Sum_probs=68.0

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeC--CEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG--EEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~  417 (437)
                      .++|...+.||+|+||.||+|... ++..+++|.+...  .......+.+|+.++.++ +|+||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            356778899999999999999864 5789999988542  223345678899999999 999999999988653  3689


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +|+||+ + ++|.
T Consensus        86 lv~e~~-~-~~L~   96 (337)
T cd07852          86 LVFEYM-E-TDLH   96 (337)
T ss_pred             EEeccc-c-cCHH
Confidence            999999 5 4553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.42  E-value=5.7e-07  Score=89.23  Aligned_cols=80  Identities=18%  Similarity=0.228  Sum_probs=66.5

Q ss_pred             cccccccCccccccceeEEEEEeC---CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ...|.+.+.||+|+||.||++...   .+..|++|.+...     +.+.+|+.++++++|||||++++.+......+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            346888899999999999999753   3578999988542     24568999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      |++ . ++|+
T Consensus       166 e~~-~-~~l~  173 (392)
T PHA03207        166 PKY-K-CDLF  173 (392)
T ss_pred             hhc-C-CCHH
Confidence            999 5 4544

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.42  E-value=8.7e-07  Score=82.35  Aligned_cols=80  Identities=21%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             CccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHH-hcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLV-AKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +.||+|+||.||++... +++.+|+|.++....   .....+..|..++ ...+|+||+++++.+...+..++|+||+ +
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~   80 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL-N   80 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc-C
Confidence            56899999999999864 588999999865321   1223445555544 4458999999999999999999999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +++|.-
T Consensus        81 ~~~L~~   86 (260)
T cd05611          81 GGDCAS   86 (260)
T ss_pred             CCCHHH
Confidence            988753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.42  E-value=4.2e-07  Score=83.77  Aligned_cols=77  Identities=26%  Similarity=0.335  Sum_probs=66.6

Q ss_pred             cccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCc
Q 013711          353 LGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ||+|+||.||++... +++.+++|.+.....   .....+..|+.++++++|+||+++++.+..+...++||||+ ++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~-~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA-PGGE   79 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC-CCCc
Confidence            689999999999875 488999999865432   23457899999999999999999999999999999999999 8888


Q ss_pred             cc
Q 013711          429 NW  430 (437)
Q Consensus       429 L~  430 (437)
                      |+
T Consensus        80 L~   81 (250)
T cd05123          80 LF   81 (250)
T ss_pred             HH
Confidence            85

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.41  E-value=6e-07  Score=84.87  Aligned_cols=78  Identities=21%  Similarity=0.338  Sum_probs=65.4

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++...+.||+|+||.||++... +++.+|+|.+.... ......+.+|+.++.++. |+||+++++++..+...++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4455678999999999999864 58899999986532 233457899999999995 99999999999988899999999


Q ss_pred             c
Q 013711          423 T  423 (437)
Q Consensus       423 ~  423 (437)
                      +
T Consensus        85 ~   85 (288)
T cd06616          85 M   85 (288)
T ss_pred             c
Confidence            8

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.41  E-value=4.6e-07  Score=88.14  Aligned_cols=83  Identities=22%  Similarity=0.357  Sum_probs=68.8

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC----------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG----------  413 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----------  413 (437)
                      .+|...+.||+|+||.||++.. .++..|++|.+........+.+.+|+.++++++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5677889999999999999986 45889999998765555667889999999999999999998766543          


Q ss_pred             ----CEeEEEEecccCCCcc
Q 013711          414 ----EEKILVYEFTLKNKDN  429 (437)
Q Consensus       414 ----~~~~lv~E~~~~~gsL  429 (437)
                          ...++|+||+ + ++|
T Consensus        85 ~~~~~~~~lv~e~~-~-~~L  102 (342)
T cd07854          85 LTELNSVYIVQEYM-E-TDL  102 (342)
T ss_pred             ccccceEEEEeecc-c-ccH
Confidence                3578999999 6 455

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.40  E-value=7.9e-07  Score=86.56  Aligned_cols=84  Identities=23%  Similarity=0.393  Sum_probs=67.3

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      .++|...+.||+|+||.||++.. .++..||||++....  ....+.+.+|+.++++++|+||+++++++....      
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            45688889999999999999985 468899999985422  222356889999999999999999999887543      


Q ss_pred             EeEEEEecccCCCcc
Q 013711          415 EKILVYEFTLKNKDN  429 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL  429 (437)
                      ..++|+||+  +++|
T Consensus        94 ~~~lv~e~~--~~~l  106 (343)
T cd07880          94 DFYLVMPFM--GTDL  106 (343)
T ss_pred             eEEEEEecC--CCCH
Confidence            458999998  4454

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.39  E-value=6e-07  Score=87.04  Aligned_cols=83  Identities=20%  Similarity=0.421  Sum_probs=67.3

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----EeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  417 (437)
                      ++|.+.++||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++++++|+||+++++++....     ..+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            5688889999999999999985 468899999986432 233456889999999999999999998876543     589


Q ss_pred             EEEecccCCCcc
Q 013711          418 LVYEFTLKNKDN  429 (437)
Q Consensus       418 lv~E~~~~~gsL  429 (437)
                      +|+||+ ++ +|
T Consensus        85 lv~e~~-~~-~l   94 (336)
T cd07849          85 IVQELM-ET-DL   94 (336)
T ss_pred             EEehhc-cc-CH
Confidence            999999 54 44

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.39  E-value=6.1e-07  Score=85.98  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=64.3

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .+.+|.|+++.|+++.. +++.+|+|++...  .....+.+.+|+.+++.++|+||+++++++...+..+++|||+ ++|
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~-~~~   84 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLM-AYG   84 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEecc-CCC
Confidence            34455666666666665 7899999998653  3344568999999999999999999999999999999999999 888


Q ss_pred             ccc
Q 013711          428 DNW  430 (437)
Q Consensus       428 sL~  430 (437)
                      +|.
T Consensus        85 ~l~   87 (314)
T cd08216          85 SCE   87 (314)
T ss_pred             CHH
Confidence            774

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.39  E-value=6.4e-07  Score=85.12  Aligned_cols=83  Identities=19%  Similarity=0.387  Sum_probs=68.0

Q ss_pred             hcccccccCccccccceeEEEEEeCC-CCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ..++|...+.||+|+||.||++.... +..+|||.++.... ....++..|+.++.+. .|+||+++++++......+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            34567778999999999999999854 88999999975332 2345677788777777 599999999999999999999


Q ss_pred             EecccCC
Q 013711          420 YEFTLKN  426 (437)
Q Consensus       420 ~E~~~~~  426 (437)
                      +||+ ++
T Consensus        93 ~e~~-~~   98 (296)
T cd06618          93 MELM-ST   98 (296)
T ss_pred             eecc-Cc
Confidence            9999 54

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.38  E-value=4.3e-07  Score=85.49  Aligned_cols=82  Identities=28%  Similarity=0.427  Sum_probs=66.6

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |.+.+.||+|++|.||+|... +++.+++|.+..... .......+|+..+.+++ |+||+++++.+..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            345678999999999999975 478899999865332 22234567999999998 999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                        +|+|+
T Consensus        81 --~~~l~   85 (283)
T cd07830          81 --EGNLY   85 (283)
T ss_pred             --CCCHH
Confidence              45654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.38  E-value=5.4e-07  Score=87.63  Aligned_cols=85  Identities=25%  Similarity=0.338  Sum_probs=67.4

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .+.|...+.||+|+||.||++.. .++..||||.+....  ....+.+.+|+.++++++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            35688889999999999999985 467899999986432  22345678999999999999999999887543      3


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++++|++  +++|.
T Consensus        94 ~~~~~~~~~--~~~l~  107 (343)
T cd07878          94 EVYLVTNLM--GADLN  107 (343)
T ss_pred             cEEEEeecC--CCCHH
Confidence            578999988  56654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.38  E-value=1e-06  Score=86.15  Aligned_cols=82  Identities=26%  Similarity=0.411  Sum_probs=66.6

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .+.|...+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.+++.++|+||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            35688889999999999999986 46889999998642  223345688999999999999999999988643      3


Q ss_pred             EeEEEEecccCC
Q 013711          415 EKILVYEFTLKN  426 (437)
Q Consensus       415 ~~~lv~E~~~~~  426 (437)
                      ..++|+||+ .+
T Consensus        95 ~~~lv~e~~-~~  105 (353)
T cd07850          95 DVYLVMELM-DA  105 (353)
T ss_pred             cEEEEEecc-CC
Confidence            479999999 54

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.37  E-value=3.2e-07  Score=90.30  Aligned_cols=86  Identities=24%  Similarity=0.389  Sum_probs=69.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--------cCHHHHHHHHHHHhcCC---CCCccceEeEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--------QGAEEFKNEVVLVAKLQ---HRNLVRLLGFCLE  412 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~  412 (437)
                      ..|...+.+|+|+||+|+.+..+ +..+|.||.+.+..-        ........|+.||..|+   |+||++++.++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            34777889999999999999975 467899999864321        11234667999999997   9999999999999


Q ss_pred             CCEeEEEEecccCCCccc
Q 013711          413 GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~  430 (437)
                      +++.||++|-..++-+||
T Consensus       641 dd~yyl~te~hg~gIDLF  658 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLF  658 (772)
T ss_pred             CCeeEEEecCCCCCcchh
Confidence            999999999886666665

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.36  E-value=1e-06  Score=85.80  Aligned_cols=91  Identities=24%  Similarity=0.347  Sum_probs=70.6

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-  413 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-  413 (437)
                      .++...+++|...+.||+|+||.||++.. .+++.||+|.+....  ....+.+.+|+.++.+++|+||+++.+++... 
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            34445667899999999999999999985 468899999986532  22345688999999999999999999988643 


Q ss_pred             -----CEeEEEEecccCCCccc
Q 013711          414 -----EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 -----~~~~lv~E~~~~~gsL~  430 (437)
                           ...++++|++  +++|.
T Consensus        90 ~~~~~~~~~lv~~~~--~~~L~  109 (345)
T cd07877          90 SLEEFNDVYLVTHLM--GADLN  109 (345)
T ss_pred             cccccccEEEEehhc--ccCHH
Confidence                 2367888877  56653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.34  E-value=1.2e-06  Score=82.68  Aligned_cols=81  Identities=31%  Similarity=0.523  Sum_probs=61.9

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcC---CCCCccceEeEEEe-----CCE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKL---QHRNLVRLLGFCLE-----GEE  415 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~-----~~~  415 (437)
                      |...+.||+|+||.||++... +++.+|+|.++....  .....+.+|+.++..+   +||||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            566788999999999999864 588999999865321  2234566777777665   69999999998764     245


Q ss_pred             eEEEEecccCCCcc
Q 013711          416 KILVYEFTLKNKDN  429 (437)
Q Consensus       416 ~~lv~E~~~~~gsL  429 (437)
                      .++++||+ ++ +|
T Consensus        82 ~~lv~e~~-~~-~l   93 (288)
T cd07863          82 VTLVFEHV-DQ-DL   93 (288)
T ss_pred             EEEEEccc-cc-CH
Confidence            89999999 64 44

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.34  E-value=7.7e-08  Score=87.88  Aligned_cols=87  Identities=24%  Similarity=0.444  Sum_probs=68.2

Q ss_pred             ccccccCccccccceeEEEEEeCC-----CCEEEEEEccccCcc-C-HHHHHHHHHHHhcCCCCCccceEeEEEe-CCEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSKASGQ-G-AEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-----~~~vAvK~l~~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~  416 (437)
                      ..|+....||+|.||.||++.-.+     ...+|+|.++..... . ...-.+|+.+++.++||||+.|..++.. +..+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            356777889999999999996422     236899999754322 2 3567899999999999999999999888 6789


Q ss_pred             EEEEecccCCCccccc
Q 013711          417 ILVYEFTLKNKDNWIG  432 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l~  432 (437)
                      +|++||. ++--+.|.
T Consensus       104 ~l~fdYA-EhDL~~II  118 (438)
T KOG0666|consen  104 WLLFDYA-EHDLWHII  118 (438)
T ss_pred             EEEehhh-hhhHHHHH
Confidence            9999999 76555544

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.33  E-value=8.8e-07  Score=85.95  Aligned_cols=84  Identities=21%  Similarity=0.404  Sum_probs=67.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  416 (437)
                      +.|...+.||+|+||.||++.. .++..|++|.+...  .......+.+|+.+++.++|+||+++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            4577788999999999999985 46899999998653  223345678899999999999999999987654     348


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      +||+||+ . ++|+
T Consensus        85 ~lv~e~~-~-~~L~   96 (337)
T cd07858          85 YIVYELM-D-TDLH   96 (337)
T ss_pred             EEEEeCC-C-CCHH
Confidence            9999999 5 4543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.33  E-value=6.8e-07  Score=86.33  Aligned_cols=81  Identities=25%  Similarity=0.420  Sum_probs=68.0

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----EeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-----EKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l  418 (437)
                      |...+.||+|++|.||++... .++.+++|.+....  ....+.+.+|+.+++.++|+||+++.+++...+     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            567789999999999999975 48899999987543  334567999999999999999999999988765     7899


Q ss_pred             EEecccCCCcc
Q 013711          419 VYEFTLKNKDN  429 (437)
Q Consensus       419 v~E~~~~~gsL  429 (437)
                      ++||+ + ++|
T Consensus        82 v~e~~-~-~~l   90 (330)
T cd07834          82 VTELM-E-TDL   90 (330)
T ss_pred             Eecch-h-hhH
Confidence            99999 5 344

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.32  E-value=8.5e-07  Score=85.91  Aligned_cols=83  Identities=18%  Similarity=0.370  Sum_probs=67.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  417 (437)
                      ++|...+.||+|+||.||++... ++..|++|.+....  ....+.+.+|+.+++.++||||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            56778889999999999999864 58999999986532  2345678899999999999999999987753    34689


Q ss_pred             EEEecccCCCcc
Q 013711          418 LVYEFTLKNKDN  429 (437)
Q Consensus       418 lv~E~~~~~gsL  429 (437)
                      +|+||+ . ++|
T Consensus        85 lv~e~~-~-~~l   94 (334)
T cd07855          85 VVMDLM-E-SDL   94 (334)
T ss_pred             EEEehh-h-hhH
Confidence            999999 5 344

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.32  E-value=7.4e-07  Score=83.76  Aligned_cols=80  Identities=30%  Similarity=0.458  Sum_probs=67.8

Q ss_pred             cccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          348 STDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ...+.||+|.+|.||+++.. +++.+++|.+....  ....+.+..|+.++++++|+||+++.+++...+..++|+||+ 
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-   80 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC-   80 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc-
Confidence            44578999999999999975 48999999997643  233467889999999999999999999999999999999999 


Q ss_pred             CCCcc
Q 013711          425 KNKDN  429 (437)
Q Consensus       425 ~~gsL  429 (437)
                      + ++|
T Consensus        81 ~-~~l   84 (282)
T cd07829          81 D-MDL   84 (282)
T ss_pred             C-cCH
Confidence            6 465

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.32  E-value=2.8e-07  Score=91.57  Aligned_cols=86  Identities=24%  Similarity=0.333  Sum_probs=69.7

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccc----cCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE--eEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSK----ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE--KIL  418 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~l  418 (437)
                      .+...++||+|.|-+||||... .|.+||.-.++.    .+....+.|..|+++|+.|+|+|||+++.++.+...  .-+
T Consensus        41 y~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~  120 (632)
T KOG0584|consen   41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF  120 (632)
T ss_pred             eeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence            3456789999999999999863 477888655532    233445789999999999999999999999988654  889


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      |+|++ ..|+|...
T Consensus       121 iTEL~-TSGtLr~Y  133 (632)
T KOG0584|consen  121 ITELF-TSGTLREY  133 (632)
T ss_pred             eeecc-cCCcHHHH
Confidence            99999 99998654

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.32  E-value=1.6e-06  Score=84.37  Aligned_cols=79  Identities=24%  Similarity=0.476  Sum_probs=64.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~  415 (437)
                      .+|...+.||+|+||.||+|.. .+++.+|+|.+....  ......+.+|+.+++.++|+||+++++++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            5677889999999999999986 468999999986432  22345688999999999999999999988654      24


Q ss_pred             eEEEEecc
Q 013711          416 KILVYEFT  423 (437)
Q Consensus       416 ~~lv~E~~  423 (437)
                      .++|+||+
T Consensus        95 ~~lv~e~~  102 (342)
T cd07879          95 FYLVMPYM  102 (342)
T ss_pred             EEEEeccc
Confidence            69999999

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.31  E-value=1.9e-07  Score=99.14  Aligned_cols=80  Identities=33%  Similarity=0.466  Sum_probs=63.5

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      -..+|+..+.||+|+||.|||++.+ +|..+|||+++... .+.-..+.+|+.++.+|+|||||+++..+.+.....-++
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            3456778889999999999999853 79999999997543 333467899999999999999999998887755444444


Q ss_pred             ec
Q 013711          421 EF  422 (437)
Q Consensus       421 E~  422 (437)
                      |-
T Consensus       557 ei  558 (1351)
T KOG1035|consen  557 EI  558 (1351)
T ss_pred             cc
Confidence            43

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.31  E-value=1.1e-06  Score=77.77  Aligned_cols=78  Identities=17%  Similarity=0.141  Sum_probs=55.1

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEccccCc--cC-------HH-----------------HHHHHHHHHhcCCCCCc
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG--QG-------AE-----------------EFKNEVVLVAKLQHRNL  403 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~--~~-------~~-----------------~~~~E~~~l~~l~H~ni  403 (437)
                      ...||+|+||.||++...+|+.||||+++....  ..       ..                 ...+|++.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            367999999999999987899999999965321  11       01                 12359999999988776


Q ss_pred             cceEeEEEeCCEeEEEEecccCCCccc
Q 013711          404 VRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       404 v~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      .......  ....+|||||+ ++++|.
T Consensus        82 ~~p~~~~--~~~~~iVmE~i-~g~~l~  105 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFI-GDDGWA  105 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEe-CCCCCc
Confidence            4433222  22348999999 776653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.30  E-value=1.1e-06  Score=82.50  Aligned_cols=80  Identities=29%  Similarity=0.456  Sum_probs=67.3

Q ss_pred             cccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          348 STDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ...+.||+|++|.||++... +++.+++|.+.....  .....+.+|+.++++++|+||+++++.+..+...++|+||+ 
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~-   80 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM-   80 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc-
Confidence            45578999999999999874 688999999865432  23467889999999999999999999999999999999999 


Q ss_pred             CCCcc
Q 013711          425 KNKDN  429 (437)
Q Consensus       425 ~~gsL  429 (437)
                      ++ +|
T Consensus        81 ~~-~l   84 (283)
T cd05118          81 DT-DL   84 (283)
T ss_pred             CC-CH
Confidence            65 44

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.29  E-value=2.6e-06  Score=80.32  Aligned_cols=78  Identities=24%  Similarity=0.301  Sum_probs=59.6

Q ss_pred             ccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHHHHH---hcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          352 KLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEVVLV---AKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      .||+|+||.||++... +++.+|+|.+.....   .....+.+|..++   ...+|+||+.+.+.+..++..++||||+ 
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-   79 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM-   79 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC-
Confidence            4899999999999864 588999998864321   1122344454333   3347999999999999999999999999 


Q ss_pred             CCCccc
Q 013711          425 KNKDNW  430 (437)
Q Consensus       425 ~~gsL~  430 (437)
                      ++|+|.
T Consensus        80 ~~~~L~   85 (279)
T cd05633          80 NGGDLH   85 (279)
T ss_pred             CCCCHH
Confidence            999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.28  E-value=1.2e-06  Score=83.61  Aligned_cols=82  Identities=28%  Similarity=0.440  Sum_probs=65.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      .++|...++||+|+||.||++... +++.+++|.+.....  .....+.+|+++++.++|+||+++++.+....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            467888899999999999999864 588999999864322  22346789999999999999999998875533      


Q ss_pred             --EeEEEEecccCC
Q 013711          415 --EKILVYEFTLKN  426 (437)
Q Consensus       415 --~~~lv~E~~~~~  426 (437)
                        ..++|+||+ .+
T Consensus        87 ~~~~~lv~~~~-~~   99 (311)
T cd07866          87 RGSVYMVTPYM-DH   99 (311)
T ss_pred             CceEEEEEecC-Cc
Confidence              469999999 54

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.28  E-value=2.3e-06  Score=80.64  Aligned_cols=81  Identities=30%  Similarity=0.480  Sum_probs=63.5

Q ss_pred             ccccCccccccceeEEEEEeCC-CCEEEEEEccccCc--cCHHHHHHHHHHHhcC---CCCCccceEeEEEeCCE-----
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASG--QGAEEFKNEVVLVAKL---QHRNLVRLLGFCLEGEE-----  415 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~-----  415 (437)
                      |+..+.||+|+||.||++.... +..+|+|.++....  .....+.+|+.++.++   +|+||+++.+++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            3456789999999999999864 88999999964322  2234567788777665   69999999999988776     


Q ss_pred             eEEEEecccCCCcc
Q 013711          416 KILVYEFTLKNKDN  429 (437)
Q Consensus       416 ~~lv~E~~~~~gsL  429 (437)
                      .++++||+ ++ +|
T Consensus        81 ~~l~~e~~-~~-~l   92 (287)
T cd07838          81 LTLVFEHV-DQ-DL   92 (287)
T ss_pred             eEEEehhc-cc-CH
Confidence            99999999 53 54

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.25  E-value=7e-07  Score=89.34  Aligned_cols=83  Identities=23%  Similarity=0.407  Sum_probs=67.7

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-C-----CCccceEeEEEeCCEeEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-H-----RNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l  418 (437)
                      .|.+.+.||+|.||+|.|+.. .+++.||||+++.... -..+-..|+.+|..|+ |     -|+|++++++...+.++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            578899999999999999985 4699999999976432 2344577999999886 5     489999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      |+|++  .-+||-
T Consensus       266 VfELL--~~NLYe  276 (586)
T KOG0667|consen  266 VFELL--STNLYE  276 (586)
T ss_pred             eehhh--hhhHHH
Confidence            99998  445543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.24  E-value=5.1e-06  Score=73.60  Aligned_cols=78  Identities=33%  Similarity=0.514  Sum_probs=67.1

Q ss_pred             cccccceeEEEEEeCC-CCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          353 LGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       353 lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ||+|.+|.||++...+ ++.+++|.+...... ..+.+.+|+..++.++|++|+++++.+......++++||+ ++++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC-EGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC-CCCcHH
Confidence            6899999999999854 889999998764332 3467999999999999999999999999989999999999 877765


Q ss_pred             c
Q 013711          431 I  431 (437)
Q Consensus       431 l  431 (437)
                      -
T Consensus        80 ~   80 (215)
T cd00180          80 D   80 (215)
T ss_pred             H
Confidence            3

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.23  E-value=1.2e-06  Score=89.85  Aligned_cols=80  Identities=19%  Similarity=0.375  Sum_probs=59.8

Q ss_pred             cccccccCccccccceeEEEEEeCC--CCEEEEEE--------------ccc---cCccCHHHHHHHHHHHhcCCCCCcc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS--GQEIAVKR--------------LSK---ASGQGAEEFKNEVVLVAKLQHRNLV  404 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~--~~~vAvK~--------------l~~---~~~~~~~~~~~E~~~l~~l~H~niv  404 (437)
                      .++|.+.++||+|+||.||++..+.  +...+.|.              +..   ........+.+|+.+|.+++|+|||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            3578889999999999999987532  22222221              110   1112235688999999999999999


Q ss_pred             ceEeEEEeCCEeEEEEecc
Q 013711          405 RLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       405 ~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++++++...+..++|+|++
T Consensus       227 ~l~~~~~~~~~~~lv~e~~  245 (501)
T PHA03210        227 KIEEILRSEANTYMITQKY  245 (501)
T ss_pred             cEeEEEEECCeeEEEEecc
Confidence            9999999999999999988

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.23  E-value=5e-06  Score=77.79  Aligned_cols=81  Identities=17%  Similarity=0.220  Sum_probs=59.8

Q ss_pred             ccccccCcc--ccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKL--GEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~l--G~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +++.+.+.+  |+|+||.||++.. .++..+++|.+........     |+.....+ +|+||+++++.+...+..++||
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence            345555555  9999999999986 3578899999864321111     22222222 6999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus        89 e~~-~~~~L~~   98 (267)
T PHA03390         89 DYI-KDGDLFD   98 (267)
T ss_pred             EcC-CCCcHHH
Confidence            999 9999853

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.22  E-value=5.1e-06  Score=78.21  Aligned_cols=79  Identities=27%  Similarity=0.278  Sum_probs=60.2

Q ss_pred             ccccccceeEEEEEe-CCCCEEEEEEccccCc---cCHHHHHHHH---HHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          352 KLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---QGAEEFKNEV---VLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      .||+|+||.||++.. .+++.||+|.+.....   .....+..|.   ..+....||||+++.+.+...+..++|+||+ 
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~-   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM-   79 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC-
Confidence            479999999999986 4588999999865321   1122234443   3444568999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++|+|..
T Consensus        80 ~g~~L~~   86 (278)
T cd05606          80 NGGDLHY   86 (278)
T ss_pred             CCCcHHH
Confidence            9998853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.21  E-value=3.9e-06  Score=75.54  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=62.9

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCcc--------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ--------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.||+|++|.||+|.. .|..+++|........        ....+.+|+.++..++|++|+....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999988 7778999986542211        123578899999999999998877777777888999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + +|++|.
T Consensus        81 ~-~G~~L~   87 (211)
T PRK14879         81 I-EGEPLK   87 (211)
T ss_pred             e-CCcCHH
Confidence            9 988874

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.20  E-value=1.5e-06  Score=84.56  Aligned_cols=85  Identities=24%  Similarity=0.419  Sum_probs=68.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE-----
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  415 (437)
                      .++|...+.||+|++|.||++... ++..+++|.+...  .....+.+.+|+.+++.++|+||+++.+++...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            456788899999999999999874 5789999998642  22234567889999999999999999988766554     


Q ss_pred             -eEEEEecccCCCccc
Q 013711          416 -KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 -~~lv~E~~~~~gsL~  430 (437)
                       .++|+||+  +++|.
T Consensus        94 ~~~lv~e~~--~~~L~  107 (343)
T cd07851          94 DVYLVTHLM--GADLN  107 (343)
T ss_pred             cEEEEEecC--CCCHH
Confidence             89999999  45653

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.19  E-value=3.5e-06  Score=76.12  Aligned_cols=84  Identities=13%  Similarity=0.114  Sum_probs=66.9

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHH---H------HHHHHHHHhcCCCCCccceEeEEEeC-
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE---E------FKNEVVLVAKLQHRNLVRLLGFCLEG-  413 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~---~------~~~E~~~l~~l~H~niv~l~g~~~~~-  413 (437)
                      ..+|...+.+|+|+||.||.... ++..+++|.+.+.......   .      +.+|+..+.++.|++|..+..+.... 
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            56788899999999999999655 5778999999754332222   2      68999999999999999998876543 


Q ss_pred             -------CEeEEEEecccCCCcc
Q 013711          414 -------EEKILVYEFTLKNKDN  429 (437)
Q Consensus       414 -------~~~~lv~E~~~~~gsL  429 (437)
                             ...+|+|||+ +|.+|
T Consensus       109 ~~~~~~~~~~~lvmEyi-~G~tL  130 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYI-EGVEL  130 (232)
T ss_pred             cccccccCCeEEEEEEE-CCccH
Confidence                   3588999999 88776

>PTZ00284 protein kinase; Provisional

Probab=98.18  E-value=3.4e-06  Score=85.72  Aligned_cols=88  Identities=22%  Similarity=0.262  Sum_probs=64.2

Q ss_pred             HHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCC------CCccceEeEEEe
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH------RNLVRLLGFCLE  412 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g~~~~  412 (437)
                      +....++|.+.++||+|+||.||++... .++.||||+++... ...+++..|+.++.+++|      .+|++++.++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3445677889999999999999999864 57889999986432 223455667777766654      458888888765


Q ss_pred             C-CEeEEEEecccCCCccc
Q 013711          413 G-EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~-~~~~lv~E~~~~~gsL~  430 (437)
                      . ...+||||++  +++|+
T Consensus       203 ~~~~~~iv~~~~--g~~l~  219 (467)
T PTZ00284        203 ETGHMCIVMPKY--GPCLL  219 (467)
T ss_pred             CCceEEEEEecc--CCCHH
Confidence            4 4688999988  45543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.17  E-value=6.1e-06  Score=73.11  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEccccCcc---------------------C-----HHHHHHHHHHHhcCCCCCc
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ---------------------G-----AEEFKNEVVLVAKLQHRNL  403 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~---------------------~-----~~~~~~E~~~l~~l~H~ni  403 (437)
                      ...||+|+||.||++...+|+.||||+++.....                     .     ...+..|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999778999999998753210                     0     1123578999999999988


Q ss_pred             cceEeEEEeCCEeEEEEecccCCCcc
Q 013711          404 VRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       404 v~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      .....+...  ..+|||||+ +++++
T Consensus        82 ~~p~~~~~~--~~~lVmE~~-~g~~~  104 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFI-GDDGS  104 (190)
T ss_pred             CCceEEEec--CCEEEEEEe-cCCCc
Confidence            554443332  348999999 87754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.17  E-value=2.6e-07  Score=98.68  Aligned_cols=90  Identities=24%  Similarity=0.373  Sum_probs=75.1

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++.....||.|.||.||.+.. .+|+..|+|.++...  ......+.+|+.++..++|||||+.+|+-...+..+|-|||
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence            345678999999999999984 568899999886432  33456788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCC
Q 013711          423 TLKNKDNWIGQDVT  436 (437)
Q Consensus       423 ~~~~gsL~l~~~~~  436 (437)
                      | .+|+|--..+++
T Consensus      1316 C-~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1316 C-EGGSLASLLEHG 1328 (1509)
T ss_pred             h-ccCcHHHHHHhc
Confidence            9 999986554443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.16  E-value=3.8e-07  Score=79.98  Aligned_cols=81  Identities=23%  Similarity=0.557  Sum_probs=68.0

Q ss_pred             cccccccCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCC--EeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGE--EKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lv  419 (437)
                      .++|++.+++|+|.|+.||.|. ..+++.+.||+++.-   ..+.+.+|+.+|..|+ ||||++|++...++.  ...||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            3567788899999999999997 457889999999753   2467899999999996 999999999988754  47899


Q ss_pred             EecccCCCc
Q 013711          420 YEFTLKNKD  428 (437)
Q Consensus       420 ~E~~~~~gs  428 (437)
                      +||+ .|-+
T Consensus       114 FE~v-~n~D  121 (338)
T KOG0668|consen  114 FEYV-NNTD  121 (338)
T ss_pred             hhhh-cccc
Confidence            9999 7654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.16  E-value=5.2e-06  Score=74.00  Aligned_cols=77  Identities=18%  Similarity=0.264  Sum_probs=59.5

Q ss_pred             ccccccceeEEEEEeCCCCEEEEEEccccCcc--------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ--------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .||+|+||.||+|.+ ++..+++|........        ....+.+|++++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            379999999999996 6788999986432211        1245778999999999887766555666677789999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       +|++|.
T Consensus        80 -~g~~l~   85 (199)
T TIGR03724        80 -EGKPLK   85 (199)
T ss_pred             -CCccHH
Confidence             998875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.13  E-value=1.1e-06  Score=81.08  Aligned_cols=95  Identities=18%  Similarity=0.212  Sum_probs=78.5

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  416 (437)
                      ....+|.+..+||+|+|.+|..+.+. ..+.+|+|++++.   ..++....+.|-.++... +||.+|.|..++..+..+
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            34567888999999999999999864 5788999999753   334556677888888777 799999999999999999


Q ss_pred             EEEEecccCCCccccccCCCC
Q 013711          417 ILVYEFTLKNKDNWIGQDVTR  437 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l~~~~~~  437 (437)
                      +.|.||+ +||+|...-+++|
T Consensus       327 ffvieyv-~ggdlmfhmqrqr  346 (593)
T KOG0695|consen  327 FFVIEYV-NGGDLMFHMQRQR  346 (593)
T ss_pred             EEEEEEe-cCcceeeehhhhh
Confidence            9999999 9999998755554

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.13  E-value=7e-06  Score=74.75  Aligned_cols=74  Identities=28%  Similarity=0.443  Sum_probs=64.4

Q ss_pred             cceeEEEEEeC-CCCEEEEEEccccCccC-HHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          357 GFGEVYKGVLP-SGQEIAVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       357 ~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      +||.||++... +++.+++|.+....... .+.+.+|++.+++++|+||+++.+.+......++++||+ ++++|.-
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~-~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYC-DGGDLFD   76 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCC-CCCCHHH
Confidence            57999999985 48999999997654444 678999999999999999999999999999999999999 8877754

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.11  E-value=1.6e-06  Score=85.16  Aligned_cols=82  Identities=24%  Similarity=0.416  Sum_probs=70.6

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccc--cCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      +....|++.++||+|+.+.||++...+.+.+|+|.+..  .+.+....|.+|+..|.+| .|.+||+|+++-..++.+||
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            33456788899999999999999987778888887743  4556678899999999999 69999999999999999999


Q ss_pred             EEecc
Q 013711          419 VYEFT  423 (437)
Q Consensus       419 v~E~~  423 (437)
                      ||||=
T Consensus       438 vmE~G  442 (677)
T KOG0596|consen  438 VMECG  442 (677)
T ss_pred             Eeecc
Confidence            99975

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.10  E-value=5.9e-07  Score=85.75  Aligned_cols=87  Identities=24%  Similarity=0.316  Sum_probs=67.9

Q ss_pred             ccccccCccccccceeEEEEE-eCCCCEEEEEEcccc--Ccc-----CHHHHHHHHHHHhcCCCCCccceEeEEE-eCCE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQ-----GAEEFKNEVVLVAKLQHRNLVRLLGFCL-EGEE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~--~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~  415 (437)
                      +.|-..+.||+|+|+.|||+. +...+.||||+-...  ...     -.+...+|.+|-+.|+||.||++++++. +.+.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            346667899999999999997 445788999985321  111     1234678999999999999999999885 4667


Q ss_pred             eEEEEecccCCCccccc
Q 013711          416 KILVYEFTLKNKDNWIG  432 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~  432 (437)
                      .+-|+||+ +|.+|.+.
T Consensus       543 FCTVLEYc-eGNDLDFY  558 (775)
T KOG1151|consen  543 FCTVLEYC-EGNDLDFY  558 (775)
T ss_pred             ceeeeeec-CCCchhHH
Confidence            88999999 99888654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.09  E-value=1.9e-06  Score=81.18  Aligned_cols=91  Identities=26%  Similarity=0.413  Sum_probs=69.8

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCC------CCEEEEEEccc-cCccCHHHHHHHHHHHhcCCCCCccceEeEE
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC  410 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  410 (437)
                      +++......+.....+-+|.||.||+|.|.+      .+.|-||.++. .++-....|+.|...+..+.|||+.++.+++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            3445555667778889999999999997643      34677888765 3444456789999999999999999999999


Q ss_pred             EeC-CEeEEEEecccCCCcc
Q 013711          411 LEG-EEKILVYEFTLKNKDN  429 (437)
Q Consensus       411 ~~~-~~~~lv~E~~~~~gsL  429 (437)
                      .+. +.++++|.++ .-|.|
T Consensus       357 ie~~~~P~V~y~~~-~~gNL  375 (563)
T KOG1024|consen  357 IEDYATPFVLYPAT-GVGNL  375 (563)
T ss_pred             eeccCcceEEEecc-CcchH
Confidence            874 5678888888 55554

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.08  E-value=6.5e-07  Score=80.26  Aligned_cols=78  Identities=26%  Similarity=0.371  Sum_probs=64.3

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +++....||.|.||.|+|-.. +.|+..|||+++.... .+.+.++.|.+...+- +.||||+++|.+..+...||-||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            344456799999999999875 4689999999976433 4456788888775554 789999999999999999999999


Q ss_pred             c
Q 013711          423 T  423 (437)
Q Consensus       423 ~  423 (437)
                      |
T Consensus       145 M  145 (361)
T KOG1006|consen  145 M  145 (361)
T ss_pred             H
Confidence            9

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.07  E-value=1.2e-05  Score=77.80  Aligned_cols=82  Identities=21%  Similarity=0.292  Sum_probs=62.9

Q ss_pred             ccccCccccccceeEEEEEeC-C--CCEEEEEEccccC--ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeC----CEe
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-S--GQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG----EEK  416 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~--~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~~  416 (437)
                      |...+.||+|+||.||++... .  +..+|+|.+....  ....+.+.+|+.++.++ +|+||+++++.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            566788999999999999964 3  6789999986432  22345788999999999 599999999876533    457


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++++||+ . ++|.
T Consensus        82 ~~~~e~~-~-~~L~   93 (332)
T cd07857          82 YLYEELM-E-ADLH   93 (332)
T ss_pred             EEEEecc-c-CCHH
Confidence            8899988 4 4543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.02  E-value=1.5e-05  Score=82.26  Aligned_cols=83  Identities=20%  Similarity=0.288  Sum_probs=62.1

Q ss_pred             cccccCccccccceeEEEEEeCCCCEEEEEE-ccccCc-------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKR-LSKASG-------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~-l~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+...+.||+|+||.||+|.+.... +++|. +.....       ...+.+.+|++++..++|++++....++...+..+
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            3455789999999999999885443 33333 221111       11246889999999999999998887777777889


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +||||+ ++++|.
T Consensus       413 lv~E~~-~g~~L~  424 (535)
T PRK09605        413 IVMEYI-GGKDLK  424 (535)
T ss_pred             EEEEec-CCCcHH
Confidence            999999 999875

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.01  E-value=2.4e-06  Score=85.14  Aligned_cols=87  Identities=23%  Similarity=0.265  Sum_probs=72.5

Q ss_pred             hcccccccCccccccceeEEEEE-eCCCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ..+.|...+.||-|+||.|..+. .+....+|.|.|++.+.   ........|-.||...+.++||+|+-.+.+.+.+|+
T Consensus       627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF  706 (1034)
T KOG0608|consen  627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF  706 (1034)
T ss_pred             cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence            34557778899999999999886 44567789999976543   233457789999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ +||++.
T Consensus       707 VMdYI-PGGDmM  717 (1034)
T KOG0608|consen  707 VMDYI-PGGDMM  717 (1034)
T ss_pred             EEecc-CCccHH
Confidence            99999 999864

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.91  E-value=3e-05  Score=69.11  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             cccccCccccccceeEEEEEeCCCCEEEEEEccccCc--c--------------------CHHHHHHHHHHHhcCCCCC-
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG--Q--------------------GAEEFKNEVVLVAKLQHRN-  402 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~--~--------------------~~~~~~~E~~~l~~l~H~n-  402 (437)
                      .+...+.||+|+||.||++..++|+.||||+++....  .                    ....+..|..++..+.|++ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            3666789999999999999988899999998754220  0                    0123677888898887774 


Q ss_pred             -ccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          403 -LVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       403 -iv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                       +++.++    ....++||||+ ++++|-
T Consensus        96 ~v~~~~~----~~~~~lv~e~~-~g~~L~  119 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYI-DGVELY  119 (198)
T ss_pred             CCCceee----cCCceEEEEEe-CCcchh
Confidence             444443    34568999999 888763

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.90  E-value=4.5e-06  Score=75.20  Aligned_cols=86  Identities=20%  Similarity=0.342  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC----ccCH----HHHHHHHHHHhcC-CCCCccceEeEEEeCC
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS----GQGA----EEFKNEVVLVAKL-QHRNLVRLLGFCLEGE  414 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~----~~~~----~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  414 (437)
                      .++...+.+|.|..+.|.++.. .+|.+.|+|++....    ....    ++-.+|+.||+++ .||+|+.+.+.+..+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            3466678899999999888875 468899999985421    1122    3456799999998 7999999999999999


Q ss_pred             EeEEEEecccCCCcccc
Q 013711          415 EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l  431 (437)
                      .+++|+|.| +.|+||=
T Consensus        97 F~FlVFdl~-prGELFD  112 (411)
T KOG0599|consen   97 FVFLVFDLM-PRGELFD  112 (411)
T ss_pred             hhhhhhhhc-ccchHHH
Confidence            999999999 9999973

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.85  E-value=2.9e-05  Score=71.17  Aligned_cols=70  Identities=21%  Similarity=0.286  Sum_probs=57.0

Q ss_pred             ccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          356 GGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       356 G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      |.+|.||++.. .+++.+|+|.+....     .+.+|...+....||||+++++.+...+..++||||+ ++|+|+-
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHA-EGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecC-CCCCHHH
Confidence            78999999986 468899999986543     2344555555667999999999999999999999999 9999853

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.84  E-value=2.7e-06  Score=80.71  Aligned_cols=88  Identities=23%  Similarity=0.201  Sum_probs=69.2

Q ss_pred             cccccccCccccccceeEEEEEeCC-CCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      ..+|....+||+|+||+|..+.-+. .+.+|||++++.-   ..+.+--+.|-++|.-. +-|.+++|..++..-+.+|.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            3467778899999999999998644 5778999997532   12233345677777766 67899999999999999999


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      ||||+ .||+|...
T Consensus       428 VMEyv-nGGDLMyh  440 (683)
T KOG0696|consen  428 VMEYV-NGGDLMYH  440 (683)
T ss_pred             EEEEe-cCchhhhH
Confidence            99999 99999765

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.76  E-value=3e-06  Score=76.20  Aligned_cols=82  Identities=21%  Similarity=0.368  Sum_probs=67.3

Q ss_pred             ccCccccccceeEEEEEeCCCCEEEEEEccc--cCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          349 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      ...+|.+...|..|+|+| +|..+.+|++.-  .+....++|..|...++-+.||||+.++|.|..+..+.++..|| |-
T Consensus       194 l~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m-p~  271 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM-PF  271 (448)
T ss_pred             hhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec-cc
Confidence            345678888999999999 555666777753  23334468999999999999999999999999999999999999 99


Q ss_pred             Cccccc
Q 013711          427 KDNWIG  432 (437)
Q Consensus       427 gsL~l~  432 (437)
                      ||||-.
T Consensus       272 gslynv  277 (448)
T KOG0195|consen  272 GSLYNV  277 (448)
T ss_pred             hHHHHH
Confidence            999854

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.75  E-value=6.7e-05  Score=62.89  Aligned_cols=77  Identities=14%  Similarity=0.066  Sum_probs=63.5

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCC--CCccceEeEEEeCCEeEEEEecccCCC
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH--RNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .+.||+|.++.||++... +..+++|.......  ...+.+|+.++..++|  .+++++++.....+..++++||+ +++
T Consensus         3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~-~g~   78 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI-EGE   78 (155)
T ss_pred             ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec-CCe
Confidence            467899999999999984 47899999865432  4678999999999976  58899988887778899999999 877


Q ss_pred             ccc
Q 013711          428 DNW  430 (437)
Q Consensus       428 sL~  430 (437)
                      ++.
T Consensus        79 ~~~   81 (155)
T cd05120          79 TLD   81 (155)
T ss_pred             ecc
Confidence            664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.74  E-value=1.4e-05  Score=76.88  Aligned_cols=87  Identities=28%  Similarity=0.329  Sum_probs=72.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +.|..-++||+|+||.|+-+... +|+.+|.|.+.+.   .++...--++|-.++.++..+.||.|-..+...+.++||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            45677789999999999999864 5888999888542   2334455788999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ..| +||+|...
T Consensus       265 tlM-NGGDLkfH  275 (591)
T KOG0986|consen  265 TLM-NGGDLKFH  275 (591)
T ss_pred             Eee-cCCceeEE
Confidence            999 99999653

>smart00090 RIO RIO-like kinase

Probab=97.64  E-value=0.00015  Score=66.62  Aligned_cols=81  Identities=19%  Similarity=0.172  Sum_probs=57.9

Q ss_pred             ccccccCccccccceeEEEEE--eCCCCEEEEEEccccCcc-------------------C-----HHHHHHHHHHHhcC
Q 013711          345 NKFSTDNKLGEGGFGEVYKGV--LPSGQEIAVKRLSKASGQ-------------------G-----AEEFKNEVVLVAKL  398 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~--~~~~~~vAvK~l~~~~~~-------------------~-----~~~~~~E~~~l~~l  398 (437)
                      ..+.+.+.||+|+||.||++.  ..+|+.||+|.++.....                   .     ...+.+|+..+.++
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            346778899999999999998  568999999998643210                   0     12356899999999


Q ss_pred             CCCC--ccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          399 QHRN--LVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       399 ~H~n--iv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      .|.+  +.++++.    ...+|||||+ ++.+|.
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~-~g~~L~  136 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFI-GGDGLP  136 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEe-cCCccc
Confidence            7533  3344432    2358999999 887664

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.63  E-value=5.8e-05  Score=67.11  Aligned_cols=78  Identities=26%  Similarity=0.451  Sum_probs=63.1

Q ss_pred             cccccccCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCC-CCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ..+|...++||+|+||.+|.|. +.+|+.||||.-....  ....+..|..+.+.|+| ..|..+..+..+.+.-.||||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3567888999999999999998 5679999999854332  22457888889888865 677788888888889999999


Q ss_pred             cc
Q 013711          422 FT  423 (437)
Q Consensus       422 ~~  423 (437)
                      ++
T Consensus        92 LL   93 (341)
T KOG1163|consen   92 LL   93 (341)
T ss_pred             cc
Confidence            99

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.58  E-value=4e-05  Score=73.14  Aligned_cols=82  Identities=24%  Similarity=0.446  Sum_probs=69.0

Q ss_pred             hcccccccCccccccceeEEEEEeC----CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      ....|...++||+|.|+.||++.+.    .++.||+|.+...+  ....+.+|+++|..+ .|.||+++.++...++...
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            3455778899999999999999853    46789999997643  335689999999999 6999999999999999999


Q ss_pred             EEEecccCCC
Q 013711          418 LVYEFTLKNK  427 (437)
Q Consensus       418 lv~E~~~~~g  427 (437)
                      +|+||+ ++-
T Consensus       112 ivlp~~-~H~  120 (418)
T KOG1167|consen  112 IVLPYF-EHD  120 (418)
T ss_pred             EEeccc-Ccc
Confidence            999999 653

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.56  E-value=2.4e-05  Score=71.56  Aligned_cols=83  Identities=22%  Similarity=0.246  Sum_probs=63.6

Q ss_pred             cccccc-cCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhc-CCCCCccceEeEEEe----CCEe
Q 013711          344 TNKFST-DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAK-LQHRNLVRLLGFCLE----GEEK  416 (437)
Q Consensus       344 ~~~~~~-~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~----~~~~  416 (437)
                      +++|.+ .++||-|-.|.|..+.. ..++..|+|+|...     ..-.+|+++--. -.|||||++++++..    ..-+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            344443 36899999999999975 46889999998543     345677766333 379999999998865    3468


Q ss_pred             EEEEecccCCCccccc
Q 013711          417 ILVYEFTLKNKDNWIG  432 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l~  432 (437)
                      ++|||.| +||+||-|
T Consensus       135 LiVmE~m-eGGeLfsr  149 (400)
T KOG0604|consen  135 LIVMECM-EGGELFSR  149 (400)
T ss_pred             Eeeeecc-cchHHHHH
Confidence            8999999 99999987

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.54  E-value=1.4e-06  Score=77.49  Aligned_cols=79  Identities=28%  Similarity=0.509  Sum_probs=60.4

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--------  413 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------  413 (437)
                      +.+....+||+|.||.||++... .|+.||+|.+-...  ..-...-++|+.++..|+|+|++.++..|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            34555678999999999999864 47788988764322  12234568999999999999999999888642        


Q ss_pred             CEeEEEEecc
Q 013711          414 EEKILVYEFT  423 (437)
Q Consensus       414 ~~~~lv~E~~  423 (437)
                      ...+||++++
T Consensus        97 ~t~ylVf~~c  106 (376)
T KOG0669|consen   97 ATFYLVFDFC  106 (376)
T ss_pred             ceeeeeHHHh
Confidence            2489999999

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.44  E-value=8.6e-05  Score=76.61  Aligned_cols=73  Identities=30%  Similarity=0.451  Sum_probs=60.2

Q ss_pred             ccccCcccccccee-EEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGE-VYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~-Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      |...+.+|.|.-|. ||+|.+ +|+.||||++-...   ..-..+|+..+..- +|||||++++.-.+....||.+|.|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            45567889998875 899999 78899999985422   23457899999888 7999999998888888999999998

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.44  E-value=0.00011  Score=63.96  Aligned_cols=85  Identities=21%  Similarity=0.313  Sum_probs=67.9

Q ss_pred             hHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHh-cCCCCCccceEeEEEeCCE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVA-KLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~  415 (437)
                      .++.+.+.+.....||+|++|.|-+-.. .+|...|+|+++..- .+..+..++|+.+.. ....|.+|+++|...+...
T Consensus        40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd  119 (282)
T KOG0984|consen   40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD  119 (282)
T ss_pred             ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence            3555666677778899999999887764 579999999997532 234456888887754 4589999999999999999


Q ss_pred             eEEEEecc
Q 013711          416 KILVYEFT  423 (437)
Q Consensus       416 ~~lv~E~~  423 (437)
                      .|+-||.|
T Consensus       120 vwIcME~M  127 (282)
T KOG0984|consen  120 VWICMELM  127 (282)
T ss_pred             EEEeHHHh
Confidence            99999999

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.34  E-value=0.00048  Score=60.56  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=49.3

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEccccCcc--CHHH----------------------HHHHHHHHhcCCCCC--c
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ--GAEE----------------------FKNEVVLVAKLQHRN--L  403 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--i  403 (437)
                      .+.||+|+||.||++...+++.||||++......  ....                      ...|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999878999999988643211  1111                      135566666664332  4


Q ss_pred             cceEeEEEeCCEeEEEEecccCCCcc
Q 013711          404 VRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       404 v~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      .+.++.    ...++||||+ +++.+
T Consensus        82 ~~~~~~----~~~~lv~e~~-~g~~~  102 (187)
T cd05119          82 PKPIDL----NRHVLVMEFI-GGDGI  102 (187)
T ss_pred             CceEec----CCCEEEEEEe-CCCCc
Confidence            444432    3468999999 87543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.33  E-value=0.00062  Score=64.59  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             cccccccCccccccceeEEEEEeCC----CCEEEEEEccccCccCH-----------HHHHHHHHHHhcCCCCCccceEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKASGQGA-----------EEFKNEVVLVAKLQHRNLVRLLG  408 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~g  408 (437)
                      ...|.+.+.||+|+||.||++...+    +..+++|..........           .....+...+..+.|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3568888999999999999998643    34566665432221110           11233444566779999999999


Q ss_pred             EEEeCC----EeEEEEecc
Q 013711          409 FCLEGE----EKILVYEFT  423 (437)
Q Consensus       409 ~~~~~~----~~~lv~E~~  423 (437)
                      ++....    ..++++|++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~  109 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKL  109 (294)
T ss_pred             eeeEecCCceEEEEEEehh
Confidence            776543    357788876

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.33  E-value=0.00023  Score=73.86  Aligned_cols=83  Identities=24%  Similarity=0.329  Sum_probs=53.4

Q ss_pred             hcccccccCccccccceeEEEEEeC-C----CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeE------EE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-S----GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGF------CL  411 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~----~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~------~~  411 (437)
                      ..++|...+.||+|+||.||+|... +    +..||+|.+.....  .+.+..|.  +....|.++..+...      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            4567888999999999999999974 4    68999998764321  12222221  122222222222211      23


Q ss_pred             eCCEeEEEEecccCCCccc
Q 013711          412 EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+.+||+||+ ++++|+
T Consensus       206 ~~~~~~LV~ey~-~~gsL~  223 (566)
T PLN03225        206 KEDEYWLVWRYE-GESTLA  223 (566)
T ss_pred             cCCceEEEEEec-CCCcHH
Confidence            466799999999 999875

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.24  E-value=0.00096  Score=59.38  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=57.6

Q ss_pred             ccCccccccceeEEEEEeCCCCEEEEEEccccCc--c--CHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEecc
Q 013711          349 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG--Q--GAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~--~--~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ....|++|+||.||...- .+..++.+.+.....  .  ...-+.+|+++|.+|. |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            456899999999996655 677777777754322  1  1235789999999995 5889999885    4469999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       .|.+|+
T Consensus        81 -~G~~L~   86 (218)
T PRK12274         81 -AGAAMY   86 (218)
T ss_pred             -cCccHH
Confidence             888875

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.18  E-value=0.00017  Score=65.32  Aligned_cols=77  Identities=21%  Similarity=0.393  Sum_probs=63.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++....||.|..|.|++.... .|..+|||.+.... .+..+.++..+.++..- ..|.||+.+|++..+...++-||.|
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            444567999999999999874 58899999997643 34456788888887765 4899999999999999999999887

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.17  E-value=0.0004  Score=69.67  Aligned_cols=31  Identities=29%  Similarity=0.454  Sum_probs=27.6

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEcccc
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA  380 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~  380 (437)
                      .+.||.|++|+||+|++.+|+.||||+.+..
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            3679999999999999999999999998653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.11  E-value=0.00064  Score=63.39  Aligned_cols=77  Identities=26%  Similarity=0.435  Sum_probs=61.4

Q ss_pred             ccccccCccccccceeEEEEE-eCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      -+|.++++||+|+||.++.|+ +-+++.||||.-+..++  .-++..|.+..+.| ..++|...+-+-..+..-.||+|+
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            357889999999999999998 45899999998654432  34567777777777 568999888777777788899999


Q ss_pred             c
Q 013711          423 T  423 (437)
Q Consensus       423 ~  423 (437)
                      +
T Consensus       106 L  106 (449)
T KOG1165|consen  106 L  106 (449)
T ss_pred             h
Confidence            9

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.03  E-value=0.0012  Score=63.70  Aligned_cols=83  Identities=27%  Similarity=0.357  Sum_probs=63.3

Q ss_pred             cccccCccccccceeEEEEEeCCC--CEEEEEEccccCccCHHHHHHHHHHHhcCCC----CCccceEeEE-EeCCEeEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSG--QEIAVKRLSKASGQGAEEFKNEVVLVAKLQH----RNLVRLLGFC-LEGEEKIL  418 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~--~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l  418 (437)
                      .|.+.++||+|+||.||.+.....  ..+|+|............+..|..++..+.+    +++.+++... ......+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            688899999999999999996443  4788888765433333367888888888863    5788888887 46778999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||+.+  |-+|.
T Consensus        99 VM~l~--G~sL~  108 (322)
T KOG1164|consen   99 VMSLL--GPSLE  108 (322)
T ss_pred             EEecc--CccHH
Confidence            99998  44543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.97  E-value=0.00098  Score=65.11  Aligned_cols=78  Identities=23%  Similarity=0.385  Sum_probs=62.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-----C---CCccceEeEEEe---
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-----H---RNLVRLLGFCLE---  412 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~---  412 (437)
                      ..|...++||=|.|++||.+.. .+.+.||+|+.+... .-.+.-+.||++|++++     |   ..||+|++.+..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            4577889999999999999985 457899999986532 33456788999998873     3   369999998865   


Q ss_pred             -CCEeEEEEecc
Q 013711          413 -GEEKILVYEFT  423 (437)
Q Consensus       413 -~~~~~lv~E~~  423 (437)
                       +..++||+|++
T Consensus       157 NG~HVCMVfEvL  168 (590)
T KOG1290|consen  157 NGQHVCMVFEVL  168 (590)
T ss_pred             CCcEEEEEehhh
Confidence             45799999999

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.95  E-value=5.5e-05  Score=68.26  Aligned_cols=77  Identities=23%  Similarity=0.457  Sum_probs=60.1

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CEeEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEKIL  418 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~l  418 (437)
                      ++..+.||-|.||.||....+ +|+.||.|.+..-  +-...+.+.+|++++.-++|.|++..++.-...     +++|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            344678999999999999864 6899999988642  122346789999999999999999988866543     25778


Q ss_pred             EEecc
Q 013711          419 VYEFT  423 (437)
Q Consensus       419 v~E~~  423 (437)
                      ++|+|
T Consensus       135 ~TELm  139 (449)
T KOG0664|consen  135 LTELM  139 (449)
T ss_pred             HHHHH
Confidence            88887

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.93  E-value=0.0039  Score=58.85  Aligned_cols=81  Identities=33%  Similarity=0.481  Sum_probs=67.6

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccCcc---CHHHHHHHHHHHhcCCCC-CccceEeEEEeCCEeEEEEec
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ---GAEEFKNEVVLVAKLQHR-NLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E~  422 (437)
                      |.....||.|.|+.||++...  ..+++|.+......   ....+.+|+.++..+.|+ +|+++...+......++++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            345678899999999999985  78899998754332   367899999999999888 799999999777778999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + .+++|.
T Consensus        80 ~-~~~~l~   86 (384)
T COG0515          80 V-DGGSLE   86 (384)
T ss_pred             C-CCCcHH
Confidence            9 888876

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.89  E-value=0.0017  Score=66.33  Aligned_cols=84  Identities=17%  Similarity=0.216  Sum_probs=55.3

Q ss_pred             ccccccCccccccceeEEEEEeCC-CCEEEEEEccccCcc--------------------------C--------HH---
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQ--------------------------G--------AE---  386 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~--------------------------~--------~~---  386 (437)
                      ..|+. +.||+|++|+||++.+++ |+.||||++++.-.+                          +        .+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34555 689999999999999977 999999998643100                          0        01   


Q ss_pred             ---HHHHHHHHHhcC----CCCCccceEeEEEe-CCEeEEEEecccCCCccc
Q 013711          387 ---EFKNEVVLVAKL----QHRNLVRLLGFCLE-GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       387 ---~~~~E~~~l~~l----~H~niv~l~g~~~~-~~~~~lv~E~~~~~gsL~  430 (437)
                         +|.+|...+.++    .|.+.+.+-.++.+ ....+|||||+ .|+.+.
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i-~G~~l~  249 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERM-YGIPVS  249 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeee-cCccHH
Confidence               244455444444    24444444444443 45678999999 998873

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.77  E-value=0.00056  Score=68.81  Aligned_cols=82  Identities=29%  Similarity=0.409  Sum_probs=64.8

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++.+.....+|.|+|+.|-.+.. ..++..+||++.+...    +-.+|+.++... +||||+++.+.+.++.+.|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            34566667799999999999875 4688899999976422    234566665555 79999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      ++ .+|.|+
T Consensus       397 ~l-~g~ell  404 (612)
T KOG0603|consen  397 LL-DGGELL  404 (612)
T ss_pred             hc-cccHHH
Confidence            99 777654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.72  E-value=0.00085  Score=60.86  Aligned_cols=84  Identities=20%  Similarity=0.363  Sum_probs=65.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeE-EEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGF-CLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lv~E  421 (437)
                      +.|.+.+.+|+|.||.+..+..+ ..+.+++|.++... ....+|.+|..---.| .|.||+.-+.+ +...+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            45777889999999999999864 46788999886532 3467899998766666 69999986654 455677889999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ |-|+|-
T Consensus       103 ~a-P~gdL~  110 (378)
T KOG1345|consen  103 FA-PRGDLR  110 (378)
T ss_pred             cC-ccchhh
Confidence            99 999874

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=96.69  E-value=0.00011  Score=71.80  Aligned_cols=87  Identities=22%  Similarity=0.256  Sum_probs=71.3

Q ss_pred             ccccccCccccccceeEEEEEeCCCC-EEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~-~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++.....||-|+||.|-.....+.. ..|+|++++.   .....+....|-.+|...+.|.||+|+-.+.+..++|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            44556678999999999999874433 3788888653   2334456889999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      |-| -||+||..
T Consensus       500 EaC-lGGElWTi  510 (732)
T KOG0614|consen  500 EAC-LGGELWTI  510 (732)
T ss_pred             Hhh-cCchhhhh
Confidence            999 99999864

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.49  E-value=0.0064  Score=54.72  Aligned_cols=80  Identities=15%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCC--CCccceEeEEEeCC---EeEEEEeccc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQH--RNLVRLLGFCLEGE---EKILVYEFTL  424 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lv~E~~~  424 (437)
                      +.|+.|..+.+|+....+|..+++|....... .....+.+|.+++..+++  .++.+++.+.....   ..++||||+ 
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i-   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV-   82 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe-
Confidence            46789999999999986668899998754322 234578999999999965  44677777765532   568999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      +|.++.-
T Consensus        83 ~G~~l~~   89 (223)
T cd05154          83 DGRVLRD   89 (223)
T ss_pred             CCEecCC
Confidence            8877654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=96.32  E-value=0.0017  Score=61.58  Aligned_cols=84  Identities=20%  Similarity=0.302  Sum_probs=63.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCC-C-C----CccceEeEEEeCCEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-H-R----NLVRLLGFCLEGEEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~g~~~~~~~~  416 (437)
                      +..|.+.+.+|+|.||.|-++... .+..||||+++.-. .-.+.-+-|++++.++. + |    -+|.+.+++.-.+..
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            567888899999999999999853 47899999996532 23455678999999983 2 2    266777777778899


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      +||+|.+  |.|+|
T Consensus       167 Civfell--G~S~~  178 (415)
T KOG0671|consen  167 CIVFELL--GLSTF  178 (415)
T ss_pred             EEEEecc--ChhHH
Confidence            9999998  44443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.04  E-value=0.019  Score=52.80  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=54.9

Q ss_pred             cCccc-cccceeEEEEEeCCCCEEEEEEccccC-------------ccCHHHHHHHHHHHhcCCCCCc--cceEeEEEeC
Q 013711          350 DNKLG-EGGFGEVYKGVLPSGQEIAVKRLSKAS-------------GQGAEEFKNEVVLVAKLQHRNL--VRLLGFCLEG  413 (437)
Q Consensus       350 ~~~lG-~G~fg~Vy~g~~~~~~~vAvK~l~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~  413 (437)
                      ...|| .|+.|.||+... .+..++||++....             ......+.+|+.++.+|+|++|  ++.++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            35677 888899999887 47788998874311             1123457889999999988875  6677764432


Q ss_pred             C----EeEEEEecccCC-Ccc
Q 013711          414 E----EKILVYEFTLKN-KDN  429 (437)
Q Consensus       414 ~----~~~lv~E~~~~~-gsL  429 (437)
                      .    ..+||+||+ +| .+|
T Consensus       115 ~~~~~~~~lV~e~l-~G~~~L  134 (239)
T PRK01723        115 HGLFYRADILIERI-EGARDL  134 (239)
T ss_pred             cCcceeeeEEEEec-CCCCCH
Confidence            2    235999999 76 465

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.02  E-value=0.014  Score=50.15  Aligned_cols=75  Identities=16%  Similarity=0.142  Sum_probs=53.7

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCcc-ceEeEEEeCCEeEEEEecccCCCcc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV-RLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      +.++.|.++.||+... .+..+++|....... ....+.+|..++..+.+.+++ +++...  ....++||||+ +|.++
T Consensus         4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i-~G~~l   78 (170)
T cd05151           4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFI-EGSEL   78 (170)
T ss_pred             eecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEec-CCCcc
Confidence            4678899999999987 477899998754321 223567899999888655544 455433  33458999999 88876


Q ss_pred             c
Q 013711          430 W  430 (437)
Q Consensus       430 ~  430 (437)
                      .
T Consensus        79 ~   79 (170)
T cd05151          79 L   79 (170)
T ss_pred             c
Confidence            5

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.96  E-value=0.0026  Score=68.43  Aligned_cols=85  Identities=21%  Similarity=0.354  Sum_probs=60.2

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC---CCCccceEeEEEeCCEeEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~l  418 (437)
                      .....|.+.+.||+|+||+||+|.-.+|+.||+|+-+...   ..+|--=..++.+|+   -+.|.++..+..-.+.-+|
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence            3345577788999999999999998789999999865432   233333333444444   2345555555666778899


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      |+||. +-|+|+
T Consensus       772 v~ey~-~~Gtll  782 (974)
T KOG1166|consen  772 VSEYS-PYGTLL  782 (974)
T ss_pred             eeecc-ccccHH
Confidence            99999 999886

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=95.75  E-value=0.011  Score=36.93  Aligned_cols=31  Identities=16%  Similarity=0.327  Sum_probs=18.9

Q ss_pred             CCCCcceeeehhhHHHHHHHHhhheeeeeec
Q 013711          280 GISSSTIIAIVAPIAVTAVLFILGFCFLRRK  310 (437)
Q Consensus       280 ~~~~~vii~ivv~~~~~~l~l~~~~~~~~~r  310 (437)
                      .....+.+++++++++++++++++++++++|
T Consensus         8 ~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR   38 (40)
T PF08693_consen    8 SNTVAIAVGVVVPVGVIIIVLGAFLFFWYRR   38 (40)
T ss_pred             CceEEEEEEEEechHHHHHHHHHHhheEEec
Confidence            3445667788888877777665444443433

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.49  E-value=0.0055  Score=60.53  Aligned_cols=78  Identities=22%  Similarity=0.293  Sum_probs=60.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCC------CCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ------HRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~~  417 (437)
                      ..|.+.-..|+|-|+.|.++... .|..||||+|.... ...+.=+.|+++|++|.      --|.++|+..+...+.++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            44666667899999999999853 47899999997532 11233478999999984      247889998888899999


Q ss_pred             EEEecc
Q 013711          418 LVYEFT  423 (437)
Q Consensus       418 lv~E~~  423 (437)
                      ||+|-+
T Consensus       511 lVFE~L  516 (752)
T KOG0670|consen  511 LVFEPL  516 (752)
T ss_pred             EEehhh
Confidence            999976

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.99  E-value=0.048  Score=46.90  Aligned_cols=77  Identities=17%  Similarity=0.255  Sum_probs=55.6

Q ss_pred             cccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccc-eEeEEEeCCEeEEEEecccCC
Q 013711          348 STDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR-LLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      ...+.|++|.+|.||+|.+ .|..+|+|.-+..  .....+..|.+++..+...++.+ ++.+    ++..+.|||. .|
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i-~G   96 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYI-DG   96 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhh-cC
Confidence            3457899999999999999 5668888876543  34567899999999888776654 3332    2335569999 77


Q ss_pred             Cccccc
Q 013711          427 KDNWIG  432 (437)
Q Consensus       427 gsL~l~  432 (437)
                      ..|...
T Consensus        97 ~~L~~~  102 (201)
T COG2112          97 RPLGKL  102 (201)
T ss_pred             cchhhh
Confidence            565443

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.73  E-value=0.045  Score=44.28  Aligned_cols=31  Identities=26%  Similarity=0.376  Sum_probs=27.7

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEcccc
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA  380 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~  380 (437)
                      .+.|+.|+.|+||+|++++|+.||||+.+..
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchH
Confidence            4679999999999999999999999998653

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=92.60  E-value=0.035  Score=51.83  Aligned_cols=75  Identities=25%  Similarity=0.331  Sum_probs=52.6

Q ss_pred             ccCccccccceeEEEEEe-CCCCEEEEEEccc--cCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------EeEEE
Q 013711          349 TDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------EKILV  419 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lv  419 (437)
                      ....+|.|.= .|-.+.. -.++.|++|.+..  ......+.-.+|..+|..+.|+||++++.++....      +.|+|
T Consensus        21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v   99 (369)
T KOG0665|consen   21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV   99 (369)
T ss_pred             eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence            3445565554 2333321 2478899988743  22344566789999999999999999999987643      58999


Q ss_pred             Eeccc
Q 013711          420 YEFTL  424 (437)
Q Consensus       420 ~E~~~  424 (437)
                      ||||+
T Consensus       100 ~e~m~  104 (369)
T KOG0665|consen  100 MELMD  104 (369)
T ss_pred             HHhhh
Confidence            99993

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=92.22  E-value=0.17  Score=51.95  Aligned_cols=59  Identities=24%  Similarity=0.234  Sum_probs=47.8

Q ss_pred             CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          367 PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       367 ~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      .++.+|.|...+.......+...+.++.|+.+|||||++++........+|||+|-+.|
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P   93 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP   93 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc
Confidence            46788888888765543344567788999999999999999999989999999998833

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=92.20  E-value=0.21  Score=41.40  Aligned_cols=18  Identities=17%  Similarity=0.246  Sum_probs=10.0

Q ss_pred             CcceeeehhhHHHHHHHH
Q 013711          283 SSTIIAIVAPIAVTAVLF  300 (437)
Q Consensus       283 ~~vii~ivv~~~~~~l~l  300 (437)
                      ..++|++++++.+.++++
T Consensus        48 knIVIGvVVGVGg~ill~   65 (154)
T PF04478_consen   48 KNIVIGVVVGVGGPILLG   65 (154)
T ss_pred             ccEEEEEEecccHHHHHH
Confidence            346677777654444333

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=91.35  E-value=0.26  Score=49.32  Aligned_cols=72  Identities=24%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             eeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeEEEEecccCCCccc
Q 013711          359 GEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       359 g~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E~~~~~gsL~  430 (437)
                      ...||+.- .+|..+..|+++....+.......-++.++++.|.|||+|..++..    ...+.+||+|++.-++|+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            45678864 4788999999954332333334556788999999999999998873    446899999993345554

>PRK10593 hypothetical protein; Provisional

Probab=90.60  E-value=1  Score=42.85  Aligned_cols=79  Identities=10%  Similarity=0.046  Sum_probs=56.8

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-C--CCccceEeEEEeC---CEeEEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-H--RNLVRLLGFCLEG---EEKILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~---~~~~lv~  420 (437)
                      +...+.||.|..+.||+-...++ .+.+|..+.  ......|..|.+.++.|. +  ..+.++++.+..+   +..+|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            34456799999999999887555 456666432  113357899999998884 2  3677888877543   5689999


Q ss_pred             ecccCCCcc
Q 013711          421 EFTLKNKDN  429 (437)
Q Consensus       421 E~~~~~gsL  429 (437)
                      |++ +++++
T Consensus        93 E~i-~G~~~  100 (297)
T PRK10593         93 ERL-RGVSV  100 (297)
T ss_pred             ecc-CCEec
Confidence            999 87654

>PLN02876 acyl-CoA dehydrogenase

Probab=88.94  E-value=1.3  Score=48.61  Aligned_cols=78  Identities=13%  Similarity=0.294  Sum_probs=55.4

Q ss_pred             cCccccccceeEEEEEeCCC---CEEEEEEccccC-ccCHHHHHHHHHHHhcCC-CCCc--cceEeEEEeC---CEeEEE
Q 013711          350 DNKLGEGGFGEVYKGVLPSG---QEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQ-HRNL--VRLLGFCLEG---EEKILV  419 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lv  419 (437)
                      .+.++.|.+..+|+....++   ..+++|+.+... ......+.+|.++|+.+. |.+|  .+++++|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            35678888999998876543   356777664432 223457899999999995 6665  7778877664   357899


Q ss_pred             EecccCCCc
Q 013711          420 YEFTLKNKD  428 (437)
Q Consensus       420 ~E~~~~~gs  428 (437)
                      |||+ +|..
T Consensus       123 ME~v-~G~~  130 (822)
T PLN02876        123 MEYL-EGRI  130 (822)
T ss_pred             EEec-CCcc
Confidence            9999 7543

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=88.11  E-value=2  Score=42.48  Aligned_cols=75  Identities=15%  Similarity=0.204  Sum_probs=52.6

Q ss_pred             CccccccceeEEEEEeCCC-CEEEEEEcccc------C-ccCHHHHHHHHHHHhcC-C--CCCccceEeEEEeCCEeEEE
Q 013711          351 NKLGEGGFGEVYKGVLPSG-QEIAVKRLSKA------S-GQGAEEFKNEVVLVAKL-Q--HRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~-~~vAvK~l~~~------~-~~~~~~~~~E~~~l~~l-~--H~niv~l~g~~~~~~~~~lv  419 (437)
                      +.||.|.+..||+....+| +.+.||.-...      . +...+.+..|.+.|..+ .  ..++++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            5689999999999998776 48999985421      1 12345677788888776 2  2456677765  44557899


Q ss_pred             EecccCCCc
Q 013711          420 YEFTLKNKD  428 (437)
Q Consensus       420 ~E~~~~~gs  428 (437)
                      |||+ ++..
T Consensus       110 ME~L-~~~~  117 (401)
T PRK09550        110 MEDL-SDHK  117 (401)
T ss_pred             EecC-CCcc
Confidence            9999 6543

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=87.66  E-value=0.51  Score=49.63  Aligned_cols=31  Identities=32%  Similarity=0.617  Sum_probs=26.9

Q ss_pred             cchhhHHhhcccccccCccccccceeEEEEEe
Q 013711          335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVL  366 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~  366 (437)
                      +-.++|+..++ +...+.+|+|+||.||.|..
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~ 1015 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNA 1015 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecC
Confidence            55678888877 88899999999999999975

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=87.49  E-value=1.6  Score=39.70  Aligned_cols=72  Identities=24%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCC--ccceEeEEEeCCEeEEEEecccCCCc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFTLKNKD  428 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~E~~~~~gs  428 (437)
                      ..||+|..+.||+.   .+...++|..+...  ......+|.+++..+..-.  +.+.+++....+...+|||++ +|..
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i-~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELI-VGKR   80 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeec-CCcc
Confidence            56899999999984   24456778775432  3456788999998885433  466777777777788999999 7653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=87.14  E-value=1.8  Score=39.55  Aligned_cols=72  Identities=13%  Similarity=0.069  Sum_probs=49.9

Q ss_pred             ccccc-eeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          354 GEGGF-GEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       354 G~G~f-g~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      -.|.. ..||+.... +..+.+|+.....   ..++.+|++++..+ .+--+.+++++....+..++|||++ +|.+|-
T Consensus         7 ~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i-~G~~l~   80 (244)
T cd05150           7 TEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAV-PGVPAA   80 (244)
T ss_pred             CCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEee-CCccHh
Confidence            34444 678988764 4678888875432   34567888888887 3444567777776666789999999 876653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=85.92  E-value=3.4  Score=36.58  Aligned_cols=72  Identities=15%  Similarity=0.164  Sum_probs=48.9

Q ss_pred             CccccccceeEEEEEeCC-------CCEEEEEEccccC------------c---------cC-HHHHH----HHHHHHhc
Q 013711          351 NKLGEGGFGEVYKGVLPS-------GQEIAVKRLSKAS------------G---------QG-AEEFK----NEVVLVAK  397 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~-------~~~vAvK~l~~~~------------~---------~~-~~~~~----~E~~~l~~  397 (437)
                      ..||.|.=+.||.|.-.+       +..+|||+.+...            .         .+ .+.+.    +|.+.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468899999999998543       4789999864210            0         01 12233    79999998


Q ss_pred             CC--CCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          398 LQ--HRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       398 l~--H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      +.  .-++.+++++    ...+|||||+ .+.
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~I-g~~  109 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFI-GDD  109 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEc-CCC
Confidence            84  3566777754    5578999999 543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=85.75  E-value=0.12  Score=52.46  Aligned_cols=81  Identities=25%  Similarity=0.322  Sum_probs=60.9

Q ss_pred             ccccccceeEEEEE----eCCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEeccc
Q 013711          352 KLGEGGFGEVYKGV----LPSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       352 ~lG~G~fg~Vy~g~----~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ++|+|.||.|+...    .+.|...|+|.+.....  .....-..|..++...+ ||.+|++.-.+..+..++++++|. 
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~-   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL-   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc-
Confidence            36899999988654    23466778888765322  11123455677777785 999999999888899999999999 


Q ss_pred             CCCcccccc
Q 013711          425 KNKDNWIGQ  433 (437)
Q Consensus       425 ~~gsL~l~~  433 (437)
                      .+|+|+.+.
T Consensus        80 rgg~lft~l   88 (612)
T KOG0603|consen   80 RGGDLFTRL   88 (612)
T ss_pred             ccchhhhcc
Confidence            999999874

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=85.33  E-value=0.26  Score=39.63  Aligned_cols=33  Identities=24%  Similarity=0.358  Sum_probs=15.1

Q ss_pred             CCCcceeeehhhHHHHHHHHhhheeeeeecccc
Q 013711          281 ISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKK  313 (437)
Q Consensus       281 ~~~~vii~ivv~~~~~~l~l~~~~~~~~~rr~~  313 (437)
                      .....+++|++++++.++++++++.|+.+|++|
T Consensus        61 fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~K   93 (122)
T PF01102_consen   61 FSEPAIIGIIFGVMAGVIGIILLISYCIRRLRK   93 (122)
T ss_dssp             SS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             ccccceeehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            344455666666655554444333333333333

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=84.53  E-value=2.9  Score=38.80  Aligned_cols=78  Identities=18%  Similarity=0.317  Sum_probs=56.0

Q ss_pred             cccCccccccceeEEEEEeCCCCEEEEEEccccC-----------------cc-----CHHHHHHHHHHHhcCCCC--Cc
Q 013711          348 STDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS-----------------GQ-----GAEEFKNEVVLVAKLQHR--NL  403 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~-----------------~~-----~~~~~~~E~~~l~~l~H~--ni  403 (437)
                      .+++.||-|.=+.||.|..+.|.+++||.=+...                 ..     ......+|.++|.+|...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            4568999999999999999999999999632110                 00     122456899999998543  66


Q ss_pred             cceEeEEEeCCEeEEEEecccCCCccc
Q 013711          404 VRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       404 v~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      .+.+++    +...+||||+ .|-.|+
T Consensus       174 P~P~~~----nRHaVvMe~i-eG~eL~  195 (304)
T COG0478         174 PKPIAW----NRHAVVMEYI-EGVELY  195 (304)
T ss_pred             CCcccc----ccceeeeehc-ccceee
Confidence            666543    5578999999 775554

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=84.06  E-value=0.98  Score=34.85  Aligned_cols=17  Identities=18%  Similarity=0.354  Sum_probs=9.0

Q ss_pred             CCCcceeeehhhHHHHH
Q 013711          281 ISSSTIIAIVAPIAVTA  297 (437)
Q Consensus       281 ~~~~vii~ivv~~~~~~  297 (437)
                      .+...+++|++++++++
T Consensus        63 ls~gaiagi~vg~~~~v   79 (96)
T PTZ00382         63 LSTGAIAGISVAVVAVV   79 (96)
T ss_pred             cccccEEEEEeehhhHH
Confidence            44455666666544433

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=83.47  E-value=2.9  Score=37.38  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=54.0

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCC--CccceEeEEEeC---CEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHR--NLVRLLGFCLEG---EEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~---~~~~lv~E~~~~  425 (437)
                      +.++.|..+.+|+....+ ..+++|.....  .....+.+|..++..+...  .+.+++......   ...+++||++ +
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i-~   78 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI-P   78 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE-S
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe-c
Confidence            467889999999999866 68999987543  3346778888888887432  356777655433   3478999999 8


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +..+.-
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            766543

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=83.21  E-value=0.26  Score=49.20  Aligned_cols=69  Identities=28%  Similarity=0.449  Sum_probs=54.4

Q ss_pred             cccccccCccccccceeEEEEEeCC-CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      .+++.....+|.|+||.|+...... +...|||+|.... ........+|...+.++.|++++++...+..
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            3567888999999999999998654 4478999996543 3344567889999999999999998776654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=83.20  E-value=2.4  Score=37.65  Aligned_cols=66  Identities=27%  Similarity=0.415  Sum_probs=48.9

Q ss_pred             ccccccCccccccc-eeEEEEEeCCCCEEEEEEccc---cC---------c---------cCHHHHHHHHHHHhcCC---
Q 013711          345 NKFSTDNKLGEGGF-GEVYKGVLPSGQEIAVKRLSK---AS---------G---------QGAEEFKNEVVLVAKLQ---  399 (437)
Q Consensus       345 ~~~~~~~~lG~G~f-g~Vy~g~~~~~~~vAvK~l~~---~~---------~---------~~~~~~~~E~~~l~~l~---  399 (437)
                      .+++..+.||.|.- |.|||..+ +|..+|+|....   ..         .         .....|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            56777889999999 99999999 788999999321   00         0         01135889999988884   


Q ss_pred             CCCc--cceEeEEE
Q 013711          400 HRNL--VRLLGFCL  411 (437)
Q Consensus       400 H~ni--v~l~g~~~  411 (437)
                      +.++  |+.+|+..
T Consensus       116 ~e~~~Avkc~Gyl~  129 (207)
T PF13095_consen  116 REGLWAVKCHGYLL  129 (207)
T ss_pred             ccCceEEEeeEEEE
Confidence            4466  88888874

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=83.02  E-value=2.1  Score=43.92  Aligned_cols=30  Identities=20%  Similarity=0.410  Sum_probs=26.6

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEccc
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSK  379 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~  379 (437)
                      .+.|+.-+.|+||++++++|+.||||+-++
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P  195 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHP  195 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCc
Confidence            367899999999999999999999998654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=81.75  E-value=1.4  Score=45.00  Aligned_cols=30  Identities=30%  Similarity=0.461  Sum_probs=27.2

Q ss_pred             CccccccceeEEEEEeCCCCEEEEEEcccc
Q 013711          351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKA  380 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~  380 (437)
                      +.|+.++-|+||++++++|+.||||+.++.
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            678999999999999999999999998654

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=81.08  E-value=0.84  Score=42.14  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=14.5

Q ss_pred             CcceeeehhhHHHHHHHHhhheeeeeecccc
Q 013711          283 SSTIIAIVAPIAVTAVLFILGFCFLRRKAKK  313 (437)
Q Consensus       283 ~~vii~ivv~~~~~~l~l~~~~~~~~~rr~~  313 (437)
                      ++++++++.+++++.++.+++++..+++|++
T Consensus       213 W~iv~g~~~G~~~L~ll~~lv~~~vr~krk~  243 (278)
T PF06697_consen  213 WKIVVGVVGGVVLLGLLSLLVAMLVRYKRKK  243 (278)
T ss_pred             EEEEEEehHHHHHHHHHHHHHHhhhhhhHHH
Confidence            3334555666555544433344444444433

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=80.59  E-value=2.7  Score=35.03  Aligned_cols=25  Identities=12%  Similarity=0.332  Sum_probs=17.6

Q ss_pred             CCCCCCCcceeeehhhHHHHHHHHh
Q 013711          277 GKSGISSSTIIAIVAPIAVTAVLFI  301 (437)
Q Consensus       277 ~~~~~~~~vii~ivv~~~~~~l~l~  301 (437)
                      ..+.....+++++.+++++++++++
T Consensus        46 knknIVIGvVVGVGg~ill~il~lv   70 (154)
T PF04478_consen   46 KNKNIVIGVVVGVGGPILLGILALV   70 (154)
T ss_pred             CCccEEEEEEecccHHHHHHHHHhh
Confidence            3445678889998888776665554

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=80.43  E-value=6.4  Score=34.90  Aligned_cols=74  Identities=18%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             cccCccccccceeEEEEEeCCCCEEEEEEccccC----------------ccCHHHHHHHHHHHhcCC------CCCccc
Q 013711          348 STDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS----------------GQGAEEFKNEVVLVAKLQ------HRNLVR  405 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~----------------~~~~~~~~~E~~~l~~l~------H~niv~  405 (437)
                      +....||+|+.-.||.-..  .....||+.....                ....++..+|+.-...+.      +.+|.+
T Consensus         4 ~~~~~i~~G~~R~cy~HP~--dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHPD--DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCCcccccCCCceEEECCC--CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            3456899999988887653  4445677765433                122355666766555554      788999


Q ss_pred             eEeEEEeCCEeEEEEecc
Q 013711          406 LLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       406 l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|.......+-+|+|.+
T Consensus        82 ~~G~veT~~G~Glv~e~I   99 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELI   99 (199)
T ss_pred             EeEEEecCCceEEEEEEE
Confidence            999999999999999987

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	437
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-18
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-16
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-13
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		8e-13
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-10
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		9e-10
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-08
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		7e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-07
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		5e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		5e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		9e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-06
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		1e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		1e-05
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		4e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		5e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		5e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		5e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		5e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		5e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-05
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		6e-05
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		6e-05
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		6e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-05
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		7e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-05
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		7e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-05
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		7e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-05
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		7e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		7e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		7e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		7e-05
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		7e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		7e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		7e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		8e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		8e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		8e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		8e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		8e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		8e-05
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		8e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		8e-05
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		8e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		8e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		4e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		4e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		4e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		4e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-04
3a2e_A	108	Crystal Structure Of Ginkbilobin-2, The Novel Antif		4e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		4e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		4e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		5e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		5e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		5e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		7e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		7e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		8e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP 367
           R+K +  +  VP +  D ++   +  +F    ++VA++ FS  N LG GGFG+VYKG L 
Sbjct: 2   RKKPQDHFFDVP-AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 368 SGQEIAVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            G  +AVKRL +   QG E +F+ EV +++   HRNL+RL GFC+   E++LVY +
Sbjct: 61  DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE-EFKNEV 392
           +F    ++VA++ F   N LG GGFG+VYKG L  G  +AVKRL +   QG E +F+ EV
Sbjct: 19  RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +++   HRNL+RL GFC+   E++LVY +
Sbjct: 79  EMISMAVHRNLLRLRGFCMTPTERLLVYPY 108

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 68/113 (60%)
Query: 310 KAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG 369
           K  K  N++ ++ + + L   ES +     +E ATN F     +G G FG+VYKGVL  G
Sbjct: 4   KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 370 QEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            ++A+KR +  S QG EEF+ E+  ++  +H +LV L+GFC E  E IL+Y++
Sbjct: 64  AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 68/113 (60%)
Query: 310 KAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG 369
           K  K  N++ ++ + + L   ES +     +E ATN F     +G G FG+VYKGVL  G
Sbjct: 4   KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 370 QEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            ++A+KR +  S QG EEF+ E+  ++  +H +LV L+GFC E  E IL+Y++
Sbjct: 64  AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 335 FDFETIEVATNKFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEE- 387
           F F  ++  TN F         NK+GEGGFG VYKG + +   +AVK+L+       EE 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 388 ---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
              F  E+ ++AK QH NLV LLGF  +G++  LVY +
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 105

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 335 FDFETIEVATNKFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEE- 387
           F F  ++  TN F         NK+GEGGFG VYKG + +   +AVK+L+       EE 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 388 ---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
              F  E+ ++AK QH NLV LLGF  +G++  LVY +
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 335 FDFETIEVATNKFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEE- 387
           F F  ++  TN F         NK+GEGGFG VYKG + +   +AVK+L+       EE 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 388 ---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
              F  E+ ++AK QH NLV LLGF  +G++  LVY +
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 335 FDFETIEVATNKFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEE- 387
           F F  ++  TN F         NK GEGGFG VYKG + +   +AVK+L+       EE 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 388 ---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
              F  E+ + AK QH NLV LLGF  +G++  LVY +
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVY 102

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Query: 353 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVRL 406
           LG G FG VYKG+ +P G+     +A+K L++ +G  A  EF +E +++A + H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 407 LGFCLEGEEKIL--------VYEFTLKNKDN 429
           LG CL    +++        + E+  ++KDN
Sbjct: 83  LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN 113

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 352 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      +LP   +  +AVK L +AS    ++F+ E  L+  LQH+++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 406 LLGFCLEGEEKILVYEF 422
             G C EG   ++V+E+
Sbjct: 85  FFGVCTEGRPLLMVFEY 101

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Query: 353 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSKASGQGAE-EFKNEVVLVAKLQHRNLVRL 406
           LG G FG VYKG+ +P G+     +A+K L++ +G  A  EF +E +++A + H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 407 LGFCLEGEEKIL--------VYEFTLKNKDN 429
           LG CL    +++        + E+  ++KDN
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN 136

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 352 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      +LP   +  +AVK L +AS    ++F+ E  L+  LQH+++VR
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 406 LLGFCLEGEEKILVYEFTLKNKD 428
             G C EG   ++V+E+ +++ D
Sbjct: 79  FFGVCTEGRPLLMVFEY-MRHGD 100

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 352 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           +LGEG FG+V+      +LP   +  +AVK L +AS    ++F+ E  L+  LQH+++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 406 LLGFCLEGEEKILVYEFTLKNKD 428
             G C EG   ++V+E+ +++ D
Sbjct: 108 FFGVCTEGRPLLMVFEY-MRHGD 129

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKG----VLPSGQEI--AVKRLSKASGQGAEEFKNEVVL 394
            +  +      +LGEG FG+V+      + P   +I  AVK L  AS    ++F  E  L
Sbjct: 9   HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD 428
           +  LQH ++V+  G C+EG+  I+V+E+ +K+ D
Sbjct: 69  LTNLQHEHIVKFYGVCVEGDPLIMVFEY-MKHGD 101

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRL-SKASGQGAEEFKNEVV 393
           E++ +      +LGE  FG+VYKG L  P+     Q +A+K L  KA G   EEF++E +
Sbjct: 22  EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           L A+LQH N+V LLG   + +   +++ +
Sbjct: 82  LRARLQHPNVVCLLGVVTKDQPLSMIFSY 110

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 328 TTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAE 386
           T+++    +++  E+     +  +KLG G +GEVY+GV       +AVK L K      E
Sbjct: 1   TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVE 59
Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           EF  E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 60  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEF 95

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRL-SKASGQGAEEFKNEVV 393
           E++ +      +LGE  FG+VYKG L  P+     Q +A+K L  KA G   EEF++E +
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           L A+LQH N+V LLG   + +   +++ +
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSY 93

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 328 TTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAE 386
           T+++    +++  E+     +  +KLG G +GEVY+GV       +AVK L K      E
Sbjct: 1   TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVE 59
Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           EF  E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 60  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 95

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++KL H+N+VR +G  L+   + ++ E 
Sbjct: 87  IISKLNHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++KL H+N+VR +G  L+   + ++ E 
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLEL 129

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 329 TLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEE 387
           T+  +  +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EE
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEE 262
Query: 388 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           F  E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 66
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEF 94

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEF 95

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEF 90

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEF 90

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEF 90

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 63
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIIIEF 91

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEF 90

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 329 TLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEE 387
           T+  +  +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EE
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 301
Query: 388 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           F  E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 336

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 67
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEF 95

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEF 90

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 332 SLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKN 390
           ++  +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  
Sbjct: 2   AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLK 60
Query: 391 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 61  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 92

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 63
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIITEF 91

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 64
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEF 92

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF  E  +
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEF 92

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  +
Sbjct: 17  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAV 75
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 76  MKEIKHPNLVQLLGVCTREPPFYIITEF 103

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF  E  +
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEF 90

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVL 394
           +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF  E  +
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +++H NLV+LLG C       ++ EF
Sbjct: 68  MKEIKHPNLVQLLGVCTREPPFYIITEF 95

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 87  IISKFNHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMEL 129

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 27  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 87  IISKFNHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 33  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 93  IISKFNHQNIVRCIGVSLQSLPRFILLEL 121

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMEL 114

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 53  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLEL 141

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLEL 155

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 43  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLEL 131

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILLEL 114

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 18  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 78  IISKFNHQNIVRCIGVSLQSLPRFILLEL 106

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLEL 129

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ 399
           E+     +  +KLG G FGEVY+GV       +AVK L K      EEF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 65
Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H NLV+LLG C       ++ EF
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEF 88

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 44  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLEL 132

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ 399
           E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 65
Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H NLV+LLG C       ++ EF
Sbjct: 66  HPNLVQLLGVCTREPPFYIIIEF 88

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 326 DLTTLESLQFD-FETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQ 383
           DL T E+L F   +  E+     +  +KLG G +GEVY GV       +AVK L + + +
Sbjct: 13  DLGT-ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME 71
Query: 384 GAEEFKNEVVLVAKLQHRNLVRLLGFC 410
             EEF  E  ++ +++H NLV+LLG C
Sbjct: 72  -VEEFLKEAAVMKEIKHPNLVQLLGVC 97

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ 399
           E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF  E  ++ +++
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIK 65
Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H NLV+LLG C       ++ EF
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEF 88

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYK----GVLPSGQ--EIAVKRL-SKASGQGAEEFKNEVV 393
           E   N       +GEG FG V++    G+LP      +AVK L  +AS     +F+ E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           L+A+  + N+V+LLG C  G+   L++E+
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVK--RLSKASGQG 384
           E LQ   E + +  N       LGEG FG V +G L     +  ++AVK  +L  +S + 
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLE 412
            EEF +E   +    H N++RLLG C+E
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIE 107

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 353 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           LG+G F +++KGV       GQ    E+ +K L KA    +E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 405 RLLGFCLEGEEKILVYEFT 423
              G C+ G+E ILV EF 
Sbjct: 76  LNYGVCVCGDENILVQEFV 94

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 353 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           LG+G F +++KGV       GQ    E+ +K L KA    +E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 405 RLLGFCLEGEEKILVYEFT 423
              G C  G+E ILV EF 
Sbjct: 76  LNYGVCFCGDENILVQEFV 94

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 351 NKLGEGGFGEVYKG----VLPSGQE--IAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
            +LGEG FG+V+      + P+  +  +AVK L   +    ++F+ E  L+  LQH ++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 405 RLLGFCLEGEEKILVYEFTLKNKD 428
           +  G C +G+  I+V+E+ +K+ D
Sbjct: 81  KFYGVCGDGDPLIMVFEY-MKHGD 103

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 323 ADNDLTTLESLQF----DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 378
           +D D+ T E+L F    D + +++     +   K+G G FG V++     G ++AVK L 
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 379 KAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +     +   EF  EV ++ +L+H N+V  +G   +     +V E+
Sbjct: 70  EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 323 ADNDLTTLESLQF----DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 378
           +D D+ T E+L F    D + +++     +   K+G G FG V++     G ++AVK L 
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 379 KAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +     +   EF  EV ++ +L+H N+V  +G   +     +V E+
Sbjct: 70  EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 340 IEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS----GQGAEEFKNEVVLV 395
           +E+   + + +  +G GGFG+VY+     G E+AVK           Q  E  + E  L 
Sbjct: 2   LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEFT 423
           A L+H N++ L G CL+     LV EF 
Sbjct: 61  AMLKHPNIIALRGVCLKEPNLCLVMEFA 88

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 411 LEGEEKILVYEF 422
           LE     LV+EF
Sbjct: 70  LEQAPICLVFEF 81

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 411 LEGEEKILVYEF 422
           LE     LV+EF
Sbjct: 72  LEQAPICLVFEF 83

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQE-IAVKRLSKASGQGA-------EEFKNEVV 393
           +A N+   + ++G+GGFG V+KG L   +  +A+K L     +G        +EF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 394 LVAKLQHRNLVRLLGF 409
           +++ L H N+V+L G 
Sbjct: 76  IMSNLNHPNIVKLYGL 91

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 411 LEGEEKILVYEF 422
           LE     LV+EF
Sbjct: 72  LEQAPICLVFEF 83

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+         KLG G FGEV+ G   +  ++AVK L K      + F  E  L+  LQH
Sbjct: 8   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLK 425
             LVRL     + E   ++ EF  K
Sbjct: 67  DKLVRLYAVVTKEEPIYIITEFMAK 91

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQE-IAVKRLSKASGQGA-------EEFKNEVV 393
           +A N+   + ++G+GGFG V+KG L   +  +A+K L     +G        +EF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 394 LVAKLQHRNLVRLLGF 409
           +++ L H N+V+L G 
Sbjct: 76  IMSNLNHPNIVKLYGL 91

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + + +    E+F  E  ++ KL H  LV+L G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 411 LEGEEKILVYEF 422
           LE     LV+EF
Sbjct: 75  LEQAPICLVFEF 86

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQE-IAVKRLSKASGQGA-------EEFKNEVV 393
           +A N+   + ++G+GGFG V+KG L   +  +A+K L     +G        +EF+ EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 394 LVAKLQHRNLVRLLGF 409
           +++ L H N+V+L G 
Sbjct: 76  IMSNLNHPNIVKLYGL 91

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVL 394
           +D +  E+         +LG G FGEV+ G   +  ++AVK L K      + F  E  L
Sbjct: 3   WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL 61
Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           +  LQH  LVRL       E   ++ E+  K
Sbjct: 62  MKTLQHDKLVRLYAVVTREEPIYIITEYMAK 92

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + + S    ++F  E  ++ KL H  LV+L G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 411 LEGEEKILVYEF 422
           LE     LV+EF
Sbjct: 92  LEQAPICLVFEF 103

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 80  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 117

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 70  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 107

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 11  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 71  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 102

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 14  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 74  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 105

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 13  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 73  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 110

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 113

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 12  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 72  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 103

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 80  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 117

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 22  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 82  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 119

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 113

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 113

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 308 RRKAKKKYNA---VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYK 363
           + K K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 364 G-VLPSGQE-----IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE 415
                 G+E     +AVK L S A     E   +E+ +++ L QH N+V LLG C  G  
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 416 KILVYEF 422
            +++ E+
Sbjct: 125 VLVITEY 131

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 43  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 134

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 77  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 114

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 14  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 74  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 105

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 26  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 86  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 123

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 308 RRKAKKKYNA---VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYK 363
           + K K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 364 G-VLPSGQE-----IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE 415
                 G+E     +AVK L S A     E   +E+ +++ L QH N+V LLG C  G  
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 416 KILVYEF 422
            +++ E+
Sbjct: 125 VLVITEY 131

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 79  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 116

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 115

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 41  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 138

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 15  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 75  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 106

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 79  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 116

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 78  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 115

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 83  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 120

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 79  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 116

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 79  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 116

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 343 ATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SKASGQGAEEFKNEVVLVAKL 398
           + +++    KLGEG +GEVYK +   + + +A+KR+    +  G      + EV L+ +L
Sbjct: 32  SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKEL 90
Query: 399 QHRNLVRLLGFCLEGEEKILVYEF 422
           QHRN++ L           L++E+
Sbjct: 91  QHRNIIELKSVIHHNHRLHLIFEY 114

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 15  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 75  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 106

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 78  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 115

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 115

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 115

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 6   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 66  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 97

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 83  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 120

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 308 RRKAKKKYNA---VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYK 363
           + K K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 364 G-VLPSGQE-----IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE 415
                 G+E     +AVK L S A     E   +E+ +++ L QH N+V LLG C  G  
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 416 KILVYEF 422
            +++ E+
Sbjct: 125 VLVITEY 131

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 99

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 77  NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN 114

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 341 EVATNKFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSKASGQGAE-EFKNEVV 393
           EVA  K +   +LG+G FG VY    KGV+    E  +A+K +++A+      EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK 425
           ++ +    ++VRLLG   +G+  +++ E   +
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 99

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN 113

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 113

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 308 RRKAKKKYNA---VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYK 363
           + K K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 364 G-VLPSGQE-----IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE 415
                 G+E     +AVK L S A     E   +E+ +++ L QH N+V LLG C  G  
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124
Query: 416 KILVYEF 422
            +++ E+
Sbjct: 125 VLVITEY 131

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSK-ASGQGAEEFKNEVVLVA 396
           +A      +  LGEG FGEVY+GV  +  G++I  AVK   K  +    E+F +E V++ 
Sbjct: 5   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
            L H ++V+L+G  +E E   ++ E 
Sbjct: 65  NLDHPHIVKLIGI-IEEEPTWIIMEL 89

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
            ++G G FG V+ G   +  ++A+K + + +    E+F  E  ++ KL H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 411 LEGEEKILVYEF 422
           LE     LV EF
Sbjct: 73  LEQAPICLVTEF 84

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSK-ASGQGAEEFKNEVVLVA 396
           +A      +  LGEG FGEVY+GV  +  G++I  AVK   K  +    E+F +E V++ 
Sbjct: 21  IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
            L H ++V+L+G  +E E   ++ E 
Sbjct: 81  NLDHPHIVKLIGI-IEEEPTWIIMEL 105

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSK-ASGQGAEEFKNEVVLVA 396
           +A      +  LGEG FGEVY+GV  +  G++I  AVK   K  +    E+F +E V++ 
Sbjct: 9   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
            L H ++V+L+G  +E E   ++ E 
Sbjct: 69  NLDHPHIVKLIGI-IEEEPTWIIMEL 93

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
           +  E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKK 236
Query: 398 LQHRNLVRLLGFCLEGEEKILV 419
           L+H  LV+L  + +  EE I +
Sbjct: 237 LRHEKLVQL--YAVVSEEPIYI 256

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 64  VNILLFMGYSTKPQLAIV 81

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 6   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 66  VNILLFMGYSTKPQLAIV 83

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 69  VNILLFMGYSTKPQLAIV 86

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 64  VNILLFMGYSTKPQLAIV 81

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 401 RNLVRLLGF 409
            N++  +G+
Sbjct: 64  VNILLFMGY 72

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 69  VNILLFMGYSTKPQLAIV 86

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 239 EKLVQL--YAVVSEEPIYI 255

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 239 EKLVQL--YAVVSEEPIYI 255

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
           +  E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 235
Query: 398 LQHRNLVRLLGFCLEGEEKILV 419
           L+H  LV+L  + +  EE I +
Sbjct: 236 LRHEKLVQL--YAVVSEEPIYI 255

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 31  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 91  VNILLFMGYSTKPQLAIV 108

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 24  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 84  VNILLFMGYSTKPQLAIV 101

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
           +  E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 398 LQHRNLVRLLGFCLEGEEKI-LVYEFTLKN 426
           L+H  LV+L  + +  EE I +V E+  K 
Sbjct: 70  LRHEKLVQL--YAVVSEEPIYIVMEYMSKG 97

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 401 RNLVRLLGFCLEGEEKIL 418
            N++  +G+  + +  I+
Sbjct: 92  VNILLFMGYSTKPQLAIV 109

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 312 KKKYNA---VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYKG-VL 366
           K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +    
Sbjct: 1   KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAF 60
Query: 367 PSGQE-----IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV 419
             G+E     +AVK L S A     E   +E+ +++ L QH N+V LLG C  G   +++
Sbjct: 61  GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 120
Query: 420 YEF 422
            E+
Sbjct: 121 TEY 123

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 74  QRLVRL--YAVVTQEPIYIITEYMEN 97

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 401 RNLVRLLGFC 410
            N++  +G+ 
Sbjct: 92  VNILLFMGYS 101

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 401 RNLVRLLGFCLEGEEKI-LVYEFTLKN 426
             LV+L  + +  EE I +V E+  K 
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKG 97

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 76
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 77  QRLVRL--YAVVTQEPIYIITEYMEN 100

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     LG G FG VYKG+ +P G++    +A+  L +A+   A +E  +E  ++A + 
Sbjct: 50  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 147

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 77
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 78  QRLVRL--YAVVTQEPIYIITEYMEN 101

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 72
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 73  QRLVRL--YAVVTQEPIYIITEYMEN 96

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 116 GICLRSEGSPLVVLPYMKHGD 136

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMEN 91

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 69
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 70  QRLVRL--YAVVTQEPIYIITEYMEN 93

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 75
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 76  QRLVRL--YAVVTQEPIYIITEYMEN 99

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 117 GICLRSEGSPLVVLPYMKHGD 137

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 74  QRLVRL--YAVVTQEPIYIITEYMEN 97

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 3   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 62  EKLVQL--YAVVSEEPIYI 78

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 401 RNLVRLLGFCLEGEEKI-LVYEFTLKN 426
             LV+L  + +  EE I +V E+  K 
Sbjct: 73  EKLVQL--YAVVSEEPIYIVIEYMSKG 97

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMEN 91

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 68  QRLVRL--YAVVTQEPIYIITEYMEN 91

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 66  EKLVQL--YAVVSEEPIYI 82

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 62
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 63  QRLVRL--YAVVTQEPIYIITEYMEN 86

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 96  LVGDELWVVMEF 107

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 68
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 69  QRLVRL--YAVVTQEPIYIITEYMEN 92

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 87  LVGDELWVVMEF 98

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 96  GICLRSEGSPLVVLPYMKHGD 116

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 5   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 64  EKLVQL--YAVVSEEPIYI 80

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 157 GICLRSEGSPLVVLPYMKHGD 177

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 98  GICLRSEGSPLVVLPYMKHGD 118

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 70  EKLVQL--YAVVSEEPIYI 86

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 8   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 401 RNLVRLLGFC 410
            N++  +G+ 
Sbjct: 68  VNILLFMGYS 77

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 98  GICLRSEGSPLVVLPYMKHGD 118

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 63
Query: 401 RNLVRLLGFCLEGEEKILVYEFTLKN 426
           + LVRL  + +  +E I +    ++N
Sbjct: 64  QRLVRL--YAVVTQEPIYIITEYMEN 87

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 97  GICLRSEGSPLVVLPYMKHGD 117

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     L  G FG VYKG+ +P G+++    A+K L +A+   A +E  +E  ++A + 
Sbjct: 16  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 113

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
           +  E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 318
Query: 398 LQHRNLVRLLGFCLEGEEKI-LVYEFTLKN 426
           L+H  LV+L  + +  EE I +V E+  K 
Sbjct: 319 LRHEKLVQL--YAVVSEEPIYIVTEYMSKG 346

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 98  GICLRSEGSPLVVLPYMKHGD 118

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 70  EKLVQL--YAVVSEEPIYI 86

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 73  EKLVQL--YAVVSEEPIYI 89

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 4   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 63  EKLVQL--YAVVSEEPIXI 79

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 98  GICLRSEGSPLVVLPYMKHGD 118

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 91  LVGDELWVVMEF 102

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 73  EKLVQL--YAVVSEEPIYI 89

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 98  LVGDELWVVMEF 109

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
           +  E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 69
Query: 398 LQHRNLVRLLGFCLEGEEKILV 419
           L+H  LV+L  + +  EE I +
Sbjct: 70  LRHEKLVQL--YAVVSEEPIYI 89

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 103 GICLRSEGSPLVVLPYMKHGD 123

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 90  GICLRSEGSPLVVLPYMKHGD 110

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 318 VPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYKG-VLPSGQE---- 371
           + ES   N  T ++  Q  + E  E   N       LG G FG+V +      G+E    
Sbjct: 3   IIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVL 62
Query: 372 -IAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
            +AVK L S A     E   +E+ +++ L QH N+V LLG C  G   +++ E+
Sbjct: 63  KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 97  GICLRSEGSPLVVLPYMKHGD 117

>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 41/101 (40%)
Query: 148 SLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLS 207
           S  NTQ +      N  +   ++ +      +   + T +A      T Y  A C   +S
Sbjct: 8   SACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSIS 67
Query: 208 SSDCNTCLRGAVARLPSCCSGKQGGRVLFPSCNVRYELYPF 248
            SDC  CL   V R+ S C+   G RV    C ++YE   F
Sbjct: 68  QSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 99  GICLRSEGSPLVVLPYMKHGD 119

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 401 RNLVRLLGFC 410
            N++  +G+ 
Sbjct: 80  VNILLFMGYS 89

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 95  GICLRSEGSPLVVLPYMKHGD 115

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 73  EKLVQL--YAVVSEEPIYI 89

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 93  GICLRSEGSPLVVLPYMKHGD 113

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     L  G FG VYKG+ +P G+++    A+K L +A+   A +E  +E  ++A + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 400 HRNLVRLLGFCLEGEEKIL--------VYEFTLKNKDN 429
           + ++ RLLG CL    +++        + ++  ++KDN
Sbjct: 83  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 120

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSKASGQGA-EEFKNEVVLVAKLQ 399
           +F     L  G FG VYKG+ +P G+++    A+K L +A+   A +E  +E  ++A + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 400 HRNLVRLLGFCLEGEEKILV--------YEFTLKNKDN 429
           + ++ RLLG CL    ++++         ++  ++KDN
Sbjct: 83  NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN 120

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 99  GICLRSEGSPLVVLPYMKHGD 119

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--SKASGQGAEEFKNEVVLVAKL 398
           E+   + +   ++G G FG VYKG      ++AVK L  +  + Q  + FKNEV ++ K 
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 399 QHRNLVRLLGFC 410
           +H N++  +G+ 
Sbjct: 78  RHVNILLFMGYS 89

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 353 LGEGGFGEVYKGVL--PSGQEI--AVKRLSKASGQG-AEEFKNEVVLVAKLQHRNLVRLL 407
           +G G FG VY G L    G++I  AVK L++ +  G   +F  E +++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 408 GFCLEGEEKILVYEFTLKNKD 428
           G CL  E   LV    +K+ D
Sbjct: 96  GICLRSEGSPLVVLPYMKHGD 116

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 218 LVGDELWVVMEF 229

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 352 KLGEGGFGEV-YKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC 410
           K+GEG  G V    V  SG+ +AVK++     Q  E   NEVV++   QH N+V +    
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 411 LEGEEKILVYEF 422
           L G+E  +V EF
Sbjct: 141 LVGDELWVVMEF 152

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ K++H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 401 RNLVRLLGFCLEGEEKILV 419
             LV+L  + +  EE I +
Sbjct: 73  EKLVQL--YAVVSEEPIYI 89

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 353 LGEGGFGEVYKGV-LPSGQEIAV----KRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG V+KGV +P G+ I +    K +   SG Q  +   + ++ +  L H ++VRL
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 407 LGFC 410
           LG C
Sbjct: 99  LGLC 102

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 353 LGEGGFGEVYKGV-LPSGQEIAV----KRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG V+KGV +P G+ I +    K +   SG Q  +   + ++ +  L H ++VRL
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 407 LGFC 410
           LG C
Sbjct: 81  LGLC 84

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	437
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-47
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-43
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	2e-29
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	1e-28
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-26
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-17
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-16
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-15
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-15
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-15
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-14
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-14
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-14
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	9e-14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-13
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-13
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-06
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	7e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  163 bits (415), Expect = 5e-47
 Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 4/122 (3%)

Query: 309 RKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS 368
            K  K  N++ ++ + + L   ES +     +E ATN F     +G G FG+VYKGVL  
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62

Query: 369 GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF----TL 424
           G ++A+KR +  S QG EEF+ E+  ++  +H +LV L+GFC E  E IL+Y++     L
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122

Query: 425 KN 426
           K 
Sbjct: 123 KR 124

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  155 bits (395), Expect = 4e-44
 Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE-EFKNEVV 393
           F    ++VA++ FS  N LG GGFG+VYKG L  G  +AVKRL +   QG E +F+ EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++   HRNL+RL GFC+   E++LVY +
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPY 108

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  151 bits (385), Expect = 7e-43
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 11/111 (9%)

Query: 322 NADNDLTTLESLQFDFETIEVATNKFS------TDNKLGEGGFGEVYKGVLPSGQEIAVK 375
           N   +++      F F  ++  TN F         NK+GEGGFG VYKG +     +AVK
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVK 60

Query: 376 RLSK----ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +L+      + +  ++F  E+ ++AK QH NLV LLGF  +G++  LVY +
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  105 bits (265), Expect = 9e-26
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 332 SLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE 391
            +    E +   +           G FG V+K  L   + +AVK       Q   + + E
Sbjct: 11  GVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS-WQNEYE 68

Query: 392 VVLVAKLQHRNLVRLLGFCLEGE----EKILVYEF 422
           V  +  ++H N+++ +G    G     +  L+  F
Sbjct: 69  VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 95.7 bits (238), Expect = 5e-22
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 333 LQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE- 391
           ++       +  +       +G G +G VYKG L   + +AVK  S A+ Q    F NE 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEK 56

Query: 392 -VVLVAKLQHRNLVRLLGFCLEGE-----EKILVYEF 422
            +  V  ++H N+ R +            E +LV E+
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 3/115 (2%)

Query: 310 KAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG 369
           K    ++ + + +             D + +++     +   K+G G FG V++     G
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HG 60

Query: 370 QEIAVKRL--SKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            ++AVK L       +   EF  EV ++ +L+H N+V  +G   +     +V E+
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 79.3 bits (196), Expect = 9e-17
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 15/98 (15%)

Query: 323 ADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKAS 381
             ++             IE        + ++G+GGFG V+KG L      +A+K L    
Sbjct: 4   GGSEFPKSRLPTLADNEIEY-------EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD 56

Query: 382 GQGA-------EEFKNEVVLVAKLQHRNLVRLLGFCLE 412
            +G        +EF+ EV +++ L H N+V+L G    
Sbjct: 57  SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRLSKASGQGAEEFKNEV 392
           ++       +  LG+G F +++KGV             E+ +K L KA    +E F    
Sbjct: 4   KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +++KL H++LV   G C+ G+E ILV EF
Sbjct: 64  SMMSKLSHKHLVLNYGVCVCGDENILVQEF 93

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL----SKASGQGAEEFKNE 391
           DF  + +       +  +G GGFG+VY+     G E+AVK       +   Q  E  + E
Sbjct: 5   DFAELTL-------EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQE 56

Query: 392 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
             L A L+H N++ L G CL+     LV EF
Sbjct: 57  AKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--SKASGQGAEEFKNEVVLVAKL 398
            +   + +   KL E   GE++KG    G +I VK L     S + + +F  E   +   
Sbjct: 6   GIDFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64

Query: 399 QHRNLVRLLGFCLEGEEKIL--VYEF 422
            H N++ +LG C          +  +
Sbjct: 65  SHPNVLPVLGACQSPPAPHPTLITHW 90

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL----PSGQEI--AVKRLSKASGQGAEEFKNEVVL 394
            +         +LGEG FG+V+        P   ++  AVK L +AS    ++F+ E  L
Sbjct: 37  HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +  LQH+++VR  G C EG   ++V+E+
Sbjct: 97  LTMLQHQHIVRFFGVCTEGRPLLMVFEY 124

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
            +  ++ +   ++G G FG V+ G   +  ++A+K + +      E+F  E  ++ KL H
Sbjct: 4   VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 62

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
             LV+L G CLE     LV EF
Sbjct: 63  PKLVQLYGVCLEQAPICLVTEF 84

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   +LG G FG V  G      ++AVK + K      +EF  E   + KL H
Sbjct: 4   ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSH 62

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
             LV+  G C +     +V E+
Sbjct: 63  PKLVKFYGVCSKEYPIYIVTEY 84

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 74.3 bits (183), Expect = 6e-15
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
            +   +   +  +G G FG V K      +++A+K++   S    + F  E+  ++++ H
Sbjct: 4   MIDYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNH 60

Query: 401 RNLVRLLGFCLE 412
            N+V+L G CL 
Sbjct: 61  PNIVKLYGACLN 72

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVL 394
             + + E+     +   +LG G FG V  G      ++A+K + K      +EF  E  +
Sbjct: 14  LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKV 72

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +  L H  LV+L G C +     ++ E+
Sbjct: 73  MMNLSHEKLVQLYGVCTKQRPIFIITEY 100

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 73.8 bits (182), Expect = 8e-15
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASGQGAEEFKNEVVL 394
            +         +LGEG FG+V+               +AVK L   +    ++F+ E  L
Sbjct: 11  HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +  LQH ++V+  G C +G+  I+V+E+
Sbjct: 71  LTNLQHEHIVKFYGVCGDGDPLIMVFEY 98

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKL 398
            +         ++G G FGEV+ G L      +AVK            +F  E  ++ + 
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169

Query: 399 QHRNLVRLLGFCLEGEEKILVYEF 422
            H N+VRL+G C + +   +V E 
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMEL 193

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 351 NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGF 409
             LG+G FG+  K     +G+ + +K L +   +    F  EV ++  L+H N+++ +G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 410 CLEGEEKILVYEF 422
             + +    + E+
Sbjct: 76  LYKDKRLNFITEY 88

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSK-ASGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMEL 114

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 11/104 (10%)

Query: 321 SNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL--S 378
             A      L+     FE +E+          +G+G FG+VY G      E+A++ +   
Sbjct: 16  RKASQTSIFLQEWDIPFEQLEI-------GELIGKGRFGQVYHGRW--HGEVAIRLIDIE 66

Query: 379 KASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +    + FK EV+   + +H N+V  +G C+      ++   
Sbjct: 67  RDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
            +   +      +G+G FG+V  G    G ++AVK +   +   A+ F  E  ++ +L+H
Sbjct: 17  ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRH 73

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            NLV+LLG  +E +  + +V E+
Sbjct: 74  SNLVQLLGVIVEEKGGLYIVTEY 96

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 72.4 bits (178), Expect = 5e-14
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK-ASGQGAEEFKNEVVLV 395
           E+     S D  +G G FGEV  G L  PS +EI  A+K L    + +   +F  E  ++
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +  H N++RL G   + +  ++V E+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEY 127

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSG------QEIAVKRL-SKASGQGAEEFKNEVV 393
           E   N       +GEG FG V++   P          +AVK L  +AS     +F+ E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           L+A+  + N+V+LLG C  G+   L++E+
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SKASGQGAEEFKNEVVLV 395
           E+  ++   +  +G G  GEV  G L  P  +++  A+K L +  + +   +F +E  ++
Sbjct: 45  EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +  H N++RL G    G   ++V E+
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEY 131

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSK-ASGQGAEEFKNEVV 393
           EVA  K +   +LG+G FG VY+GV            +A+K +++ AS +   EF NE  
Sbjct: 21  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ +    ++VRLLG   +G+  +++ E 
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 14/169 (8%)

Query: 264 LSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFLRRKAKKKYNAVPESNA 323
           +SP  P             +S    I+ P     +  I     L     KK  +      
Sbjct: 1   MSPIDPMGHHHHH-HGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQ 59

Query: 324 DNDLTTLESLQFDFET--------IEVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI- 372
             +   ++    + E         I  ++     +  +G G FG VY G L    G++I 
Sbjct: 60  GANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 119

Query: 373 -AVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV 419
            AVK L++        +F  E +++    H N++ LLG CL  E   LV
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 70.7 bits (174), Expect = 8e-14
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL----PSGQEI--AVKRLSK-ASGQGAEEFKNEVV 393
           E++ +      +LGE  FG+VYKG L    P  Q    A+K L   A G   EEF++E +
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           L A+LQH N+V LLG   + +   +++ +
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSY 93

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQGAEEFKNEVV 393
           E           LGEG FG+V K              +AVK L   AS     +  +E  
Sbjct: 19  EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ ++ H ++++L G C +    +L+ E+
Sbjct: 79  VLKQVNHPHVIKLYGACSQDGPLLLIVEY 107

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 71.3 bits (175), Expect = 9e-14
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSK-ASGQGAEEFKNEVV 393
           EV     +    LG G FGEVY+G +      PS  ++AVK L +  S Q   +F  E +
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++K  H+N+VR +G  L+   + ++ E 
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLEL 155

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 71.6 bits (176), Expect = 9e-14
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
            +   +      +G+G FG+V  G    G ++AVK +   +   A+ F  E  ++ +L+H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRH 245

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            NLV+LLG  +E +  + +V E+
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEY 268

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK--ASGQG 384
           E LQ   E + +  N       LGEG FG V +G L    G  +  AVK +    +S + 
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGE 414
            EEF +E   +    H N++RLLG C+E  
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ 399
           E+     +  +KLG G +GEVY+GV       +AVK L K      EEF  E  ++ +++
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK 67

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H NLV+LLG C       ++ EF
Sbjct: 68  HPNLVQLLGVCTREPPFYIITEF 90

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK-ASGQGAEEFKNEVVLV 395
            +A      +  LGEG FGEVY+GV     G++I  AVK   K  +    E+F +E V++
Sbjct: 8   GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67

Query: 396 AKLQHRNLVRLLGFCLE 412
             L H ++V+L+G   E
Sbjct: 68  KNLDHPHIVKLIGIIEE 84

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 340 IEVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK-ASGQGAEEFKNEVVL 394
           I  ++     +  +G G FG VY G L    G++I  AVK L++        +F  E ++
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILV 419
           +    H N++ LLG CL  E   LV
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLV 104

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQE---IAVKRLSK-ASGQGAEEFKNEVVL 394
           E+  +  +    +G G FGEVYKG+L   SG++   +A+K L    + +   +F  E  +
Sbjct: 40  EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +  H N++RL G   + +  +++ E+
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEY 127

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSK--ASGQG 384
           + L+   E + +   +F+    LG+G FG V +  L     S  ++AVK L     +   
Sbjct: 9   DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68

Query: 385 AEEFKNEVVLVAKLQHRNLVRLLGFCLEGE 414
            EEF  E   + +  H ++ +L+G  L   
Sbjct: 69  IEEFLREAACMKEFDHPHVAKLVGVSLRSR 98

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL---SKASGQGAEEFKNEVV 393
            +         KLG+G FG V +G    PSG+ +  AVK L     +  +  ++F  EV 
Sbjct: 14  LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73

Query: 394 LVAKLQHRNLVRLLGFCLE 412
            +  L HRNL+RL G  L 
Sbjct: 74  AMHSLDHRNLIRLYGVVLT 92

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 328 TTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKR--LSKASGQGA 385
             L +    F+++ V    +S   ++G GG  +V++ +    Q  A+K   L +A  Q  
Sbjct: 11  VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 70

Query: 386 EEFKNEVVLVAKLQHRNL--VRLLGFCLEGEEKI-LVYEF 422
           + ++NE+  + KLQ  +   +RL  +    ++ I +V E 
Sbjct: 71  DSYRNEIAYLNKLQQHSDKIIRLYDY-EITDQYIYMVMEC 109

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 351 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
            +LG+G FG V           +G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 406 LLGFCLEGEEK--ILVYEF 422
             G C     +   L+ E+
Sbjct: 107 YKGVCYSAGRRNLKLIMEY 125

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 351 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
            +LG+G FG V           +G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 406 LLGFCLEGEEK--ILVYEF 422
             G C     +   L+ E+
Sbjct: 76  YKGVCYSAGRRNLKLIMEY 94

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRLSK-ASGQGAEEFKNEVVLV 395
           E+   +      +GEG FG+V++G+   P    +  A+K      S    E+F  E + +
Sbjct: 11  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70

Query: 396 AKLQHRNLVRLLGFCLE 412
            +  H ++V+L+G   E
Sbjct: 71  RQFDHPHIVKLIGVITE 87

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 308 RRKAKKKYN---AVPESNADNDLTTLESLQFDF-ETIEVATNKFSTDNKLGEGGFGEVYK 363
           + K K KY     + ES   N  T ++  Q  + E  E   N       LG G FG+V +
Sbjct: 5   KYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64

Query: 364 GVL------PSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEE 415
                     +  ++AVK L S A     E   +E+ +++ L QH N+V LLG C  G  
Sbjct: 65  ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124

Query: 416 KILVYEF 422
            +++ E+
Sbjct: 125 VLVITEY 131

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKL 398
           E+   + +   ++G G FG VYKG      ++AVK L+    + Q  + FKNEV ++ K 
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77

Query: 399 QHRNLVRLLGFCLE 412
           +H N++  +G+   
Sbjct: 78  RHVNILLFMGYSTA 91

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 350 DNKLGEGGFGEVYKGVLPSGQE----IAVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLV 404
           D  +G+G FG VY G      +     A+K LS+    Q  E F  E +L+  L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 405 RLLGFCLEGEEKILV 419
            L+G  L  E    V
Sbjct: 86  ALIGIMLPPEGLPHV 100

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 69.3 bits (170), Expect = 4e-13
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 9/128 (7%)

Query: 304 FCFLRRKAKKKYNAVPESNADNDLTTLESLQFDFETI-EVATNKFSTDNKLGEGGFGEVY 362
           +    R   +        ++DN+   ++  +++++   E           LG G FG+V 
Sbjct: 3   YKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVM 62

Query: 363 KGVL------PSGQEIAVKRL-SKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGE 414
                         ++AVK L  KA     E   +E+ ++ +L  H N+V LLG C    
Sbjct: 63  NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122

Query: 415 EKILVYEF 422
              L++E+
Sbjct: 123 PIYLIFEY 130

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L K      + F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67

Query: 401 RNLVRLLGFCLE 412
           + LVRL     +
Sbjct: 68  QRLVRLYAVVTQ 79

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 69.4 bits (170), Expect = 6e-13
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 328 TTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAE 386
            T+  +  +++  E+     +  +KLG G +GEVY+GV       +AVK L K      E
Sbjct: 203 PTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVE 261

Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           EF  E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 68.6 bits (168), Expect = 6e-13
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSK--ASGQGAEEFKNEVVLV 395
           E I V    +S   ++G GG  +V++ +    Q  A+K ++   A  Q  + ++NE+  +
Sbjct: 2   ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61

Query: 396 AKLQHRNL--VRLLGFCLEGEEKI-LVYEF 422
            KLQ  +   +RL  +    ++ I +V E 
Sbjct: 62  NKLQQHSDKIIRLYDY-EITDQYIYMVMEC 90

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 10/92 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRL-SKASGQGAEEFKNE 391
           E   +K +    LGEG FG+V                  +AVK L   A+ +   +  +E
Sbjct: 31  EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90

Query: 392 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           + ++  + +H+N++ LLG C +     ++ E+
Sbjct: 91  MEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 122

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 67.7 bits (166), Expect = 9e-13
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQ 383
           E L +D    E   ++      LG G FG+V +          + + +AVK L   A+  
Sbjct: 13  ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72

Query: 384 GAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV 419
                 +E+ ++  +  H N+V LLG C +    ++V
Sbjct: 73  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 67.8 bits (166), Expect = 9e-13
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 351 NKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           ++LG+G FG V           +G  +AVK+L  +      +F+ E+ ++  L    +V+
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 406 LLGFCLEGEEK--ILVYEF 422
             G       +   LV E+
Sbjct: 89  YRGVSYGPGRQSLRLVMEY 107

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 10/92 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--------PSGQEIAVKRL-SKASGQGAEEFKNE 391
           E   +K +    LGEG FG+V                  +AVK L   A+ +   +  +E
Sbjct: 77  EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136

Query: 392 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           + ++  + +H+N++ LLG C +     ++ E+
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 168

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL--PSGQEI--AVKRL-SKASGQGAEEFKNEVVLV 395
           E+   +      +GEG FG+V++G+   P    +  A+K   +  S    E+F  E + +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445

Query: 396 AKLQHRNLVRLLGFCLE 412
            +  H ++V+L+G   E
Sbjct: 446 RQFDHPHIVKLIGVITE 462

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 322 NADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKR 376
           +    L  L     D  T             LGEG FG+V           +G+ +AVK 
Sbjct: 10  HHHGALEVLFQGPGD-PT-VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA 67

Query: 377 L-SKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK--ILVYEF 422
           L + A  Q    +K E+ ++  L H ++++  G C +       LV E+
Sbjct: 68  LKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 350 DNKLGEGGFGEVYKGVL-PSGQEI--AVKRLSK-ASGQGAEEFKNEVVLVAKLQHRNLVR 405
           D +LG G FG V +GV     ++I  A+K L +       EE   E  ++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 406 LLGFCLE 412
           L+G C  
Sbjct: 75  LIGVCQA 81

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 350 DNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSKASGQGA-EEFKNEVVLVAKLQHRNL 403
              LG G FG VYKG+     E     +A+K L +A+   A +E  +E  ++A + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 404 VRLLGFCLEGEEKILVYEF 422
            RLLG CL      L+ + 
Sbjct: 80  CRLLGICLT-STVQLITQL 97

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRL-SKASGQGAEEFKNE 391
           E+  ++      LGEG FG+V                 ++AVK L S A+ +   +  +E
Sbjct: 65  ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124

Query: 392 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           + ++  + +H+N++ LLG C +     ++ E+
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 156

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSKASGQGA-EEFKNEVVL 394
                +      LG G FG V+KGV     E     + +K +   SG+ + +   + ++ 
Sbjct: 9   IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68

Query: 395 VAKLQHRNLVRLLGFCLE 412
           +  L H ++VRLLG C  
Sbjct: 69  IGSLDHAHIVRLLGLCPG 86

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 351 NKLGEGGFGEVYKGVLP-----SGQEIAVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLV 404
             LGEG FG+V           +G+++AVK L  ++ G    + K E+ ++  L H N+V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 405 RLLGFCLEGEEK--ILVYEF 422
           +  G C E       L+ EF
Sbjct: 87  KYKGICTEDGGNGIKLIMEF 106

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 68.0 bits (166), Expect = 2e-12
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 349 TDNKLGEGGFGEVYKGVL-PSGQEI--AVKRL-SKASGQGAEEFKNEVVLVAKLQHRNLV 404
            D +LG G FG V +GV     ++I  A+K L         EE   E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 405 RLLGFCLEGEEKILVYEF 422
           RL+G C   E  +LV E 
Sbjct: 400 RLIGVCQA-EALMLVMEM 416

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 309 RKAKKKYNAVPESNADNDLTTLESLQFDFETIEVAT----NKFSTDNKLGEGGFGEVYKG 364
            K + KY+    ++ D     +   ++  + +EV      + +    +LG G FG V++ 
Sbjct: 12  SKVRGKYDGPKINDYDKFYEDIWK-KYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC 70

Query: 365 V-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           V   +G+    K ++          KNE+ ++ +L H  L+ L     +  E +L+ EF
Sbjct: 71  VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQE---IAVKRL-SKASGQGAEEFKNEVVLVA 396
            +  N     + +GEG FG+V K  +         A+KR+   AS     +F  E+ ++ 
Sbjct: 21  VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80

Query: 397 KL-QHRNLVRLLGFCLEGEEKILVYEF 422
           KL  H N++ LLG C       L  E+
Sbjct: 81  KLGHHPNIINLLGACEHRGYLYLAIEY 107

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 67.2 bits (164), Expect = 3e-12
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 6/120 (5%)

Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFST----DNKLGEGGFGEVYK 363
            +    +      SN DN +  +   Q+  + +E+  +          +LG G FG V++
Sbjct: 117 EQGKIVRGKGTVSSNYDNYVFDIWK-QYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHR 175

Query: 364 GV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
                +G   A K +        E  + E+  ++ L+H  LV L     +  E +++YEF
Sbjct: 176 VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG G FGEV+        ++AVK + K      E F  E  ++  LQH
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242

Query: 401 RNLVRLLGFCLE 412
             LV+L     +
Sbjct: 243 DKLVKLHAVVTK 254

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 65.7 bits (161), Expect = 4e-12
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQGAEEFKNEVV 393
           E   N+ S    LG G FG+V +          +   +AVK L   A     E   +E+ 
Sbjct: 19  EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78

Query: 394 LVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           +++ L  H N+V LLG C  G   +++ E+
Sbjct: 79  VLSYLGNHMNIVNLLGACTIGGPTLVITEY 108

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 66.0 bits (161), Expect = 6e-12
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 310 KAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG 369
           K ++++   P+   D+D     S     E I V    +S   ++G GG  +V++ +    
Sbjct: 24  KFERQHMDSPDLGTDDDDKASSS---ANECISVKGRIYSILKQIGSGGSSKVFQVLNEKK 80

Query: 370 QEIAVKR--LSKASGQGAEEFKNEVVLVAKLQHRNL--VRLLGFCLEGEEKILVYEF 422
           Q  A+K   L +A  Q  + ++NE+  + KLQ  +   +RL  + +  +   +V E 
Sbjct: 81  QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 137

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 65.0 bits (159), Expect = 6e-12
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 321 SNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSK 379
            + +      + L++D+E  E           LG+G +G VY G  L +   IA+K + +
Sbjct: 3   RSTEEGDCESDLLEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPE 57

Query: 380 ASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE 414
              + ++    E+ L   L+H+N+V+ LG   E  
Sbjct: 58  RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG 92

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 65.1 bits (159), Expect = 7e-12
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 339 TIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK 397
            + +    +    KLGEGGF  V     L  G   A+KR+     Q  EE + E  +   
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82

Query: 398 LQHRNLVRLLGFCLE----GEEKILVYEF 422
             H N++RL+ +CL       E  L+  F
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPF 111

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 65.0 bits (159), Expect = 7e-12
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 350 DNKLGEGGFGEVYKGVLPSG---QEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLV 404
           D +LG G FG V KG        + +AVK L          +E   E  ++ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 405 RLLGFCLEGEEKILVYEF 422
           R++G C   E  +LV E 
Sbjct: 82  RMIGICE-AESWMLVMEM 98

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 65.9 bits (161), Expect = 8e-12
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238

Query: 401 RNLVRLLGFCLE 412
             LV+L     E
Sbjct: 239 EKLVQLYAVVSE 250

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 66.1 bits (161), Expect = 8e-12
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L K      E F  E  ++ KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321

Query: 401 RNLVRLLGFCLE 412
             LV+L     E
Sbjct: 322 EKLVQLYAVVSE 333

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSKASGQGA-EEFKNEVVLVAKL 398
            +F     LG G FG VYKG+     E     +A+K L +A+   A +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 399 QHRNLVRLLGFCLEGEEKILVYEF 422
            + ++ RLLG CL      L+ + 
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQL 97

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
            + F     LG+G FG+V K       +  A+K++     +      +EV+L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 403 LVRLLGFCLEGEEKILVYEFTLKNKDNWI 431
           +VR     LE    +       K    +I
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFI 92

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-L 366
              + K     PE+  +  +   E L+          +  +   ++G G FGEV++    
Sbjct: 21  SSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDK 80

Query: 367 PSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE 415
            +G + AVK  RL             E+V  A L    +V L G   EG  
Sbjct: 81  QTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPW 124

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 62.1 bits (151), Expect = 9e-11
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE--VVLVAKLQHRNLVRLL 407
             ++G+G +GEV+ G    G+++AVK            +  E  +     ++H N++  +
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFI 97

Query: 408 GFCLEGEEKI----LVYEF 422
              ++G        L+ ++
Sbjct: 98  AADIKGTGSWTQLYLITDY 116

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
             S    LG G FG+V+K     +G ++A K +     +  EE KNE+ ++ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 405 RLLGFCLEGEEKILVYEF 422
           +L        + +LV E+
Sbjct: 150 QLYDAFESKNDIVLVMEY 167

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
                +  K+GEG  G V       SG+++AVK +     Q  E   NEVV++   QH N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V +    L GEE  ++ EF
Sbjct: 104 VVEMYKSYLVGEELWVLMEF 123

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
             K+     LG G FG V++ V   S +    K +    G      K E+ ++   +HRN
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRN 62

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           ++ L       EE ++++EF
Sbjct: 63  ILHLHESFESMEELVMIFEF 82

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
             K++   K+G+G  G VY  + + +GQE+A+++++       E   NE++++ + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V  L   L G+E  +V E+
Sbjct: 79  IVNYLDSYLVGDELWVVMEY 98

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
              +    +LG+G FG+VYK     +G   A K +   S +  E++  E+ ++A   H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V+LLG      +  ++ EF
Sbjct: 78  IVKLLGAYYHDGKLWIMIEF 97

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 332 SLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEF 388
           S + +         +++    LG+G FGEV K     + QE AVK ++KA    +     
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 389 KNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
             EV L+ KL H N+++L     E      +V E 
Sbjct: 69  LREVELLKKLDHPNIMKLFEIL-EDSSSFYIVGEL 102

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQH 400
           +  +    KLG G +GEV       +  E A+K + K   S     +   EV ++  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            N+++L  F  E +    LV E 
Sbjct: 96  PNIMKLYDFF-EDKRNYYLVMEC 117

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 6/72 (8%)

Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE--VVLVAKLQHRNLVRLLG 408
             +G+G +GEV++G    G+ +AVK  S    +  + +  E  +     L+H N++  + 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 409 FCLEGEEKILVY 420
             +         
Sbjct: 70  SDMTSRHSSTQL 81

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE--FKNEVVLVAKLQH 400
             +++    LG+G FGEV K     + QE AVK ++KAS +  +      EV L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 401 RNLVRLLGFCLEGEEKILVY 420
            N+++L       E+    Y
Sbjct: 81  PNIMKLFEIL---EDSSSFY 97

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 350 DNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           D ++G G F  VYKG+   +  E+A    +  K +    + FK E  ++  LQH N+VR 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 407 LGFCLEGEEK 416
                   + 
Sbjct: 91  YDSWESTVKG 100

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVA 396
           +T+E+   +      L EGGF  VY+   + SG+E A+KRL     +       EV  + 
Sbjct: 21  QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80

Query: 397 KLQ-HRNLVRLLGFCLEGEEKI 417
           KL  H N+V+       G+E+ 
Sbjct: 81  KLSGHPNIVQFCSAASIGKEES 102

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHR 401
            + F    KLG G FG+V+      SG E  +K ++K   Q   E  + E+ ++  L H 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 402 NLVRLLGFCLEGEEKI-LVYE 421
           N++++     E    + +V E
Sbjct: 81  NIIKIFEVF-EDYHNMYIVME 100

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 60.1 bits (146), Expect = 6e-10
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE---FKNEVVLVAKLQ 399
           ++++     LG+G FGEV       +GQE AVK +SK   +   +      EV L+ +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 400 HRNLVRLLGFCLEGEEKI-LVYEF 422
           H N+++L  F  E +    LV E 
Sbjct: 85  HPNIMKLYEFF-EDKGYFYLVGEV 107

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
              F     LG G F EV+      +G+  A+K + K+        +NE+ ++ K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 403 LVRLLGFCLEGEEKILVY 420
           +V L       E     Y
Sbjct: 68  IVTLEDIY---ESTTHYY 82

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 58.5 bits (142), Expect = 9e-10
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 15/95 (15%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVL 394
           DF+ IE           +G GGFG+V+K      G+   +KR+   +    E+ + EV  
Sbjct: 12  DFKEIE----------LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKA 57

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKDN 429
           +AKL H N+V   G     +               
Sbjct: 58  LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 6/91 (6%)

Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSKASGQGAEEFKNE 391
              ++ +      + LGEG F +VY+          + Q+  +K    A+          
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117

Query: 392 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           +  +        ++     L     +LV E 
Sbjct: 118 MERLKPSMQHMFMKFYSAHLFQNGSVLVGEL 148

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 342 VATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQ 399
            + + +   + LG+G    V++G    +G   A+K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 400 HRNLVRLLGF--CLEGEEKILVYEF 422
           H+N+V+L           K+L+ EF
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEF 90

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
              ++ +N +G G +GEV   V   +    A K++ K   +  + FK E+ ++  L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 403 LVRLLGFCLEGEEKILVY 420
           ++RL       E+   +Y
Sbjct: 68  IIRLYETF---EDNTDIY 82

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA------SGQGAEEFKNEVVLVA 396
            + +    +LG G F  V K     +G+E A K + K        G   EE + EV ++ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           +++H N++ L        + +L+ E 
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILEL 89

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNE--VVLVAKLQHRNLVRLL 407
              +G+G FGEV++G    G+E+AVK  S    +    +  E  +     L+H N++  +
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFI 102

Query: 408 GFCLEGEEKI----LVYEF 422
               +         LV ++
Sbjct: 103 AADNKDNGTWTQLWLVSDY 121

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKR--LSKASGQGAEEFKNEVVLVAKL-Q 399
           T +F    K+G G FG V+K V    G   A+KR     A     +    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H ++VR      E +  ++  E+
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEY 92

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 342 VATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQ 399
            + + +   + LG+G    V++G    +G   A+K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 400 HRNLVRLLGF--CLEGEEKILVYEF 422
           H+N+V+L           K+L+ EF
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEF 90

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL-SKASGQ 383
           E L +D    E   ++      LG G FG+V +          + + +AVK L   A+  
Sbjct: 8   ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67

Query: 384 GAEEFKNEV-VLVAKLQHRNLVRLLGFCLEGEEKILV 419
                 +E+ +L+    H N+V LLG C +    ++V
Sbjct: 68  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQH 400
           ++ +    +LG+G F  V + V   +G E A K ++    S +  ++ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 401 RNLVRLLGFCLEGEEKILVY 420
            N+VRL       +E+   Y
Sbjct: 65  PNIVRLHDSI---QEESFHY 81

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA------SGQGAEEFKNEVVLVA 396
            + + T  +LG G F  V K     +G + A K + K        G   E+ + EV ++ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++QH N++ L        + IL+ E 
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILEL 95

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKAS------GQGAEEFKNEVVLVA 396
            + +    +LG G F  V K     +G E A K + K        G   EE + EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ H N++ L        + +L+ E 
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILEL 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA------SGQGAEEFKNEVVLVA 396
            + +    +LG G F  V K     +G E A K + K        G   EE + EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ H N++ L        + +L+ E 
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILEL 96

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQH 400
           ++ +    +LG+G F  V + V   +G E A K ++    S +  ++ + E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 401 RNLVRLLGFCLEGEEKILVY 420
            N+VRL       +E+   Y
Sbjct: 88  PNIVRLHDSI---QEESFHY 104

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE---FKNEVVLVAKLQH 400
             F  + K+G G F EVY+   L  G  +A+K++       A+       E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
            N+++     +E  E  +V E 
Sbjct: 92  PNVIKYYASFIEDNELNIVLEL 113

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.5 bits (137), Expect = 8e-09
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE--FKNEVVLVAKLQH 400
           T ++    +LG+G F  V + V + +GQE A   ++       +    + E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 401 RNLVRLLGFCLEGEEKILVY 420
            N+VRL        E+   Y
Sbjct: 70  PNIVRLHDSI---SEEGHHY 86

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSKASGQGAEEFKNEVVLVAK 397
            + +     +G+G F  V + +   +GQ+ AVK     + + + G   E+ K E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
           L+H ++V LL          +V+EF
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEF 107

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.9 bits (135), Expect = 9e-09
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFK---NEVVLVAKLQ 399
              FS   ++G G FG VY    + + + +A+K++S +  Q  E+++    EV  + KL+
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H N ++  G  L      LV E+
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEY 135

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 56.3 bits (136), Expect = 9e-09
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 329 TLESLQFDFETIEVATNK--FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAE 386
           +LE    D ET  V   K  F   + LG G  G +    +   +++AVKR+       A+
Sbjct: 6   SLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD 65

Query: 387 EFKNEVVLVAKL-QHRNLVRLLGF 409
               EV L+ +  +H N++R    
Sbjct: 66  ---REVQLLRESDEHPNVIRYFCT 86

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)

Query: 328 TTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSKAS 381
           +  E+L F   ++     K+     +G+G +G V   +   +    A+K     ++ + +
Sbjct: 9   SGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN 68

Query: 382 GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
            +  E  K EV L+ KL H N+ RL     E E+ I LV E 
Sbjct: 69  PKDVERIKTEVRLMKKLHHPNIARLYE-VYEDEQYICLVMEL 109

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA-EEFKNEVV 393
           DFE I+           LG GGFG V++          A+KR+   + + A E+   EV 
Sbjct: 6   DFEPIQC----------LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55

Query: 394 LVAKLQHRNLVRLLGFCLEGEEK 416
            +AKL+H  +VR     LE    
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNTT 78

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEV-VLVAKLQHRNL 403
           N   ++  LG G  G V       G+ +AVKR+        +    E+ +L     H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 404 VRLLGFCLEGEEKILVY 420
           +R   +C E      +Y
Sbjct: 72  IRY--YCSE-TTDRFLY 85

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 16/94 (17%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA-------------EEFK 389
              +    KLG G +GEV          E A+K + K+                  EE  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 390 NEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
           NE+ L+  L H N+++L     E ++   LV EF
Sbjct: 95  NEISLLKSLDHPNIIKLFDVF-EDKKYFYLVTEF 127

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 22/105 (20%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 320 ESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS 378
            S   + L  +++L+ D E +      F+   K+G+G FGEV+KG+   + + +A+K + 
Sbjct: 3   HSPVQSGLPGMQNLKADPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 56

Query: 379 KASGQGA-EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
               +   E+ + E+ ++++     + +  G  L+  +  ++ E+
Sbjct: 57  LEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFC 410
           LGEG    V   + L + QE AVK + K  G        EV ++ + Q HRN++ L+ F 
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80

Query: 411 LEGEEKILVY 420
              EE+   Y
Sbjct: 81  ---EEEDRFY 87

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFK--NEVVLVAKL-QHR 401
            F   ++LG G +GEV+K      G+  AVKR         +  +   EV    K+ QH 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 402 NLVRLLGFCLEGEEKILVYEF 422
             VRL     EG    L  E 
Sbjct: 118 CCVRLEQAWEEGGILYLQTEL 138

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 17/112 (15%)

Query: 314 KYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEI 372
             + V     +    ++E     +  ++          K+GEG FG+         G++ 
Sbjct: 7   HSSGVDLGTENLYFQSME----KYVRLQ----------KIGEGSFGKAILVKSTEDGRQY 52

Query: 373 AVK--RLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +K   +S+ S +  EE + EV ++A ++H N+V+      E     +V ++
Sbjct: 53  VIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVV 393
            D   +      F     +G G +G+VYKG  + +GQ  A+K +   +G   EE K E+ 
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEIN 72

Query: 394 LVAKL-QHRNLVRLLG 408
           ++ K   HRN+    G
Sbjct: 73  MLKKYSHHRNIATYYG 88

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNL 403
            +    +LG GGFG V + +   +G+++A+K+  +       E +  E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 404 VRLL 407
           V   
Sbjct: 75  VSAR 78

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 15/125 (12%)

Query: 311 AKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQ 370
           +    N V  +  D+    ++ L  D +T E     ++    +G G FG V++  L    
Sbjct: 6   SNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESD 65

Query: 371 EIAVKRLSKASGQGAEEFKN-EVVLVAKLQHRNLVRLLGFCLEGEEKI------LVYEF- 422
           E+A+K++ +      + FKN E+ ++  ++H N+V L  F     +K       LV E+ 
Sbjct: 66  EVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120

Query: 423 --TLK 425
             T+ 
Sbjct: 121 PETVY 125

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA---EEFKNEVVLVAKLQHRNLVRLLG 408
           LG+GGF + ++     + +  A K + K+        E+   E+ +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 409 FCLEGEEKI-LVYEF 422
              E  + + +V E 
Sbjct: 83  -FFEDNDFVFVVLEL 96

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE--------FKNEVVL 394
            +++     LG G  GEV       + +++A+K +SK                 + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + KL H  ++++  F  + E+  +V E 
Sbjct: 69  LKKLNHPCIIKIKNFF-DAEDYYIVLEL 95

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA---EEFKNEVVLVAKLQHRNLVRLLG 408
           LG+GGF + ++     + +  A K + K+        E+   E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 409 FCLEGEEKI-LVYEF 422
              E  + + +V E 
Sbjct: 109 -FFEDNDFVFVVLEL 122

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.0 bits (127), Expect = 9e-08
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 344 TNKFSTDNKLGEG--GFGEVYKGV-LPSGQEIAVKR--LSKASGQGAEEFKNEVVLVAKL 398
              +     +G+G      V      P+G+ + V+R  L   S +     + E+ +    
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 399 QHRNLVRLLGFCLEGEEKILVYEF 422
            H N+V      +   E  +V  F
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSF 107

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE--------FKNEVVL 394
            +++     LG G  GEV       + +++A++ +SK                 + E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + KL H  ++++  F  + E+  +V E 
Sbjct: 194 LKKLNHPCIIKIKNFF-DAEDYYIVLEL 220

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKAS--GQGAEE-FKNEVVLVAKLQHRNLVRLLG 408
           LG+G F  VY+   + +G E+A+K + K +    G  +  +NEV +  +L+H +++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 409 FCLEGEEKI-LVYEF 422
              E    + LV E 
Sbjct: 79  -YFEDSNYVYLVLEM 92

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
              F    KLGEG +G VYK +   +GQ +A+K++        +E   E+ ++ +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V+  G   +  +  +V E+
Sbjct: 86  VVKYYGSYFKNTDLWIVMEY 105

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-L 366
                +  ++V  S A    + +     D    +  ++ F  +++LG G    VY+    
Sbjct: 16  ENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQK 75

Query: 367 PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY 420
            + +  A+K L K   +  +  + E+ ++ +L H N+++L       E    + 
Sbjct: 76  GTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIF---ETPTEIS 124

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS-KASGQGAEEFKNEVVLVAKLQHRN 402
           + +     +G G    V      P  +++A+KR++ +      +E   E+  +++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V      +  +E  LV + 
Sbjct: 75  IVSYYTSFVVKDELWLVMKL 94

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQH 400
             F     LG+G FG VY      S   +A+K L KA         + + EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            N++RL G+      ++ L+ E+
Sbjct: 69  PNILRLYGY-FHDATRVYLILEY 90

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHR 401
             +     +G G +G   K      G+ +  K       +    +   +EV L+ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 402 NLVRLLGFCLEGEEKIL 418
           N+VR     ++     L
Sbjct: 66  NIVRYYDRIIDRTNTTL 82

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 349 TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHR-NLV 404
           T  +LG G F  V + +   +GQE A K L K         E  +E+ ++   +    ++
Sbjct: 33  TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92

Query: 405 RLLGFCLEGEEKILVYEF 422
            L        E IL+ E+
Sbjct: 93  NLHEVYENTSEIILILEY 110

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKN----EVVLVAK 397
            K+     +GEG +G V K     +G+ +A+K    S       +  K     E+ L+ +
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD----KMVKKIAMREIKLLKQ 80

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF---TLKN 426
           L+H NLV LL  C + +   LV+EF   T+ +
Sbjct: 81  LRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKN----EVVLVAK 397
            K+    K+GEG +G V+K     +GQ +A+K    S+         K     E+ ++ +
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD----PVIKKIALREIRMLKQ 58

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
           L+H NLV LL          LV+E+
Sbjct: 59  LKHPNLVNLLEVFRRKRRLHLVFEY 83

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 4/62 (6%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSK---ASGQGAEEFKNEVVLVAKLQHRNLVRLLG 408
           L  G    V+    +   ++ A+K  +     S    E         A+L   +      
Sbjct: 70  LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129

Query: 409 FC 410
             
Sbjct: 130 RR 131

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--------EVVLV 395
            ++   + LGEG F  VYK     + Q +A+K++         E K+        E+ L+
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH---RSEAKDGINRTALREIKLL 66

Query: 396 AKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
            +L H N++ LL      +  I LV++F
Sbjct: 67  QELSHPNIIGLLD-AFGHKSNISLVFDF 93

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 13/123 (10%)

Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-L 366
             K           N        E    D+   +    K+   + +G G    V + V  
Sbjct: 57  EAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR 116

Query: 367 PSGQEIAVKRLSKASGQGAEE--------FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 417
            +G E AVK +   + + + E         + E  ++ ++  H +++ L+      E   
Sbjct: 117 ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY---ESSS 173

Query: 418 LVY 420
            ++
Sbjct: 174 FMF 176

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN 402
           T+ +     +G G +    + +   +  E AVK + K+     EE     +L+   QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE---IEILLRYGQHPN 77

Query: 403 LVRLLGFCLEGEEKILVY 420
           ++ L       ++   VY
Sbjct: 78  IITLKDVY---DDGKYVY 92

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQH 400
           + F     LG+G FG VY      +   +A+K L K+         + + E+ + + L+H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            N++R+  +     ++I L+ EF
Sbjct: 74  PNILRMYNY-FHDRKRIYLMLEF 95

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKN--------EVVLVA 396
            K+    K+GEG +G VYK     G+ +A+KR+        +            E+ L+ 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           +L H N+V L+          LV+EF
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEF 100

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 16/87 (18%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKN--------EVVLVA 396
            K+    K+GEG +G VYK     G+  A+K++        E+           E+ ++ 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 397 KLQHRNLVRLLGFCLEGEEKI-LVYEF 422
           +L+H N+V+L    +  ++++ LV+E 
Sbjct: 56  ELKHSNIVKLYD-VIHTKKRLVLVFEH 81

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKN-EVVLVAKLQHR 401
              ++    +G G FG VY+  L  SG+ +A+K++ +      + FKN E+ ++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHC 107

Query: 402 NLVRLLGFCLEGEEKI------LVYEF 422
           N+VRL  F     EK       LV ++
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDY 134

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 12/81 (14%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVV 393
           DFE I+           +G GGFG V++          A+KR+   + + A E    EV 
Sbjct: 7   DFEPIQC----------MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 56

Query: 394 LVAKLQHRNLVRLLGFCLEGE 414
            +AKL+H  +VR     LE  
Sbjct: 57  ALAKLEHPGIVRYFNAWLETP 77

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 17/80 (21%)

Query: 352 KLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEV-VLVAKLQHRNLVRLLGF 409
            LG G  G+V +     + ++ A+K L         + + EV +     Q  ++VR++  
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVD- 78

Query: 410 CLEGEEKILVYEFTLKNKDN 429
                    VYE     +  
Sbjct: 79  ---------VYENLYAGRKC 89

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--------SGQGAEEFKNEVVLVA 396
           K+ST + LG G FG V+  V     +E+ VK + K               +   E+ +++
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 397 KLQHRNLVRLLGFCLEGEEKI-LVYEF 422
           +++H N++++L    E +    LV E 
Sbjct: 85  RVEHANIIKVLDI-FENQGFFQLVMEK 110

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 11/89 (12%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA---------EEFKNEVV 393
              +     LG G    V + +  P+ +E AVK +    G            E    EV 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 394 LVAKL-QHRNLVRLLGFCLEGEEKILVYE 421
           ++ K+  H N+++L           LV++
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFD 104

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 44/164 (26%)

Query: 248 FYNESATAPPAPAPVLLSPPPPGSVTTSRGKSGISSSTIIAIVAPIAVTAVLFILGFCFL 307
             N    +PP P P    PP P +       +                            
Sbjct: 2   LSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQ------------------- 42

Query: 308 RRKAKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-L 366
             +   K     + NA  D         D++              LG G  G+V +    
Sbjct: 43  FPQFHVKSGLQIKKNAIID---------DYKVTS---------QVLGLGINGKVLQIFNK 84

Query: 367 PSGQEIAVKRLSKASGQGAEEFKNEV-VLVAKLQHRNLVRLLGF 409
            + ++ A+K L         + + EV +     Q  ++VR++  
Sbjct: 85  RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDV 123

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN------EVVLVAKLQHR--NL 403
           LG GGFG VY G+ +     +A+K + K       E  N      EVVL+ K+      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 404 VRLLGFCLEGEEKI-LVYEF 422
           +RLL +  E  +   L+ E 
Sbjct: 111 IRLLDW-FERPDSFVLILER 129

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 47.1 bits (112), Expect = 7e-06
 Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 352 KLGEGGFGEVYKGV---LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLG 408
           K+G G +G VYK         ++ A+K++ + +G      + E+ L+ +L+H N++ L  
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSACR-EIALLRELKHPNVISLQK 85

Query: 409 FCLE-GEEKI-LVYEF 422
             L   + K+ L++++
Sbjct: 86  VFLSHADRKVWLLFDY 101

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSK------ASGQGAEEFKNEVVLVAKL----QHR 401
           LG+GGFG V+ G  L    ++A+K + +      +    +     EV L+ K+     H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 402 NLVRLLGFCLEGEEKI-LVYEFTLKNKD 428
            ++RLL +  E +E   LV E  L  +D
Sbjct: 99  GVIRLLDW-FETQEGFMLVLERPLPAQD 125

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 46.4 bits (111), Expect = 8e-06
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 17/88 (19%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--------EVVLV 395
             F    K+GEG +G VYK     +G+ +A+K++        +            E+ L+
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 396 AKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
            +L H N+V+LL   +  E K+ LV+EF
Sbjct: 57  KELNHPNIVKLLD-VIHTENKLYLVFEF 83

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 17/88 (19%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--------EVVLV 395
            K+    K+GEG +G V+K     + + +A+KR+        ++           E+ L+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 396 AKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
            +L+H+N+VRL    L  ++K+ LV+EF
Sbjct: 56  KELKHKNIVRLHD-VLHSDKKLTLVFEF 82

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 343 ATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN-----EVVLVA 396
           ++++F    KLG G +  VYKG+   +G  +A+K +       +EE        E+ L+ 
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK----LDSEEGTPSTAIREISLMK 58

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
           +L+H N+VRL        +  LV+EF
Sbjct: 59  ELKHENIVRLYDVIHTENKLTLVFEF 84

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNLVRLLGFC 410
           LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 411 LEGEEKI-LVYEF 422
                   L  E+
Sbjct: 74  RREGNIQYLFLEY 86

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 12/86 (13%)

Query: 331 ESLQFDFETIEVATNKFS-----TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQG 384
             L+  F+  E      +     +   LG G  G+V +     +GQ+ A+K L       
Sbjct: 10  SGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD----- 64

Query: 385 AEEFKNEV-VLVAKLQHRNLVRLLGF 409
           + + + EV          ++V +L  
Sbjct: 65  SPKARQEVDHHWQASGGPHIVCILDV 90

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 348 STDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVR 405
             D  LGEG F    K V   S Q  AVK +SK         + E+  +   + H N+V+
Sbjct: 14  LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVK 70

Query: 406 LLGFCLEGEEKILVY 420
           L        +++  +
Sbjct: 71  LHEVF---HDQLHTF 82

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNLVRLLGFC 410
           LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 411 LEGEEKI-LVYEF 422
                   L  E+
Sbjct: 74  RREGNIQYLFLEY 86

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHRNLVRLL 407
           LGEG +G+V + +   +    AVK L K        G    K E+ L+ +L+H+N+++L+
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 408 G-FCLEGEEKI-LVYEF 422
                E ++K+ +V E+
Sbjct: 73  DVLYNEEKQKMYMVMEY 89

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 15/87 (17%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN--------EVVLV 395
           +++    KLGEG +GEVYK +   + + +A+KR+        E  +         EV L+
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +LQHRN++ L           L++E+
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEY 114

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 352 KLGEGGFGEVYKG---VLPSGQEIAVKRLSKASGQGAEE-FKNEVVLVAKLQHRNLVRLL 407
            +  GG G +Y      + +G+ + +K L  +    A+     E   +A++ H ++V++ 
Sbjct: 87  CIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 408 GFCLEGEE 415
            F    E 
Sbjct: 146 NF---VEH 150

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 16/120 (13%), Positives = 46/120 (38%), Gaps = 20/120 (16%)

Query: 321 SNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA 380
            +  ++ + L  L    +  +   N +     L +G F ++        +  A+K+  K+
Sbjct: 7   KDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKS 65

Query: 381 -----------------SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
                                 ++FKNE+ ++  +++   +   G  +   +++ ++YE+
Sbjct: 66  LLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEY 124

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%)

Query: 345 NKFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSKASGQGAEEFKN-----EVVLVAKL 398
             +   +KLGEG +  VYKG    +   +A+K +        EE        EV L+  L
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDL 57

Query: 399 QHRNLVRLLGFCLEGEEKI-LVYEF 422
           +H N+V L    +  E+ + LV+E+
Sbjct: 58  KHANIVTLHD-IIHTEKSLTLVFEY 81

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN-EVVLVAKL 398
           E ++ K+S    LG G FG V +   + SG+  A+K++ +        +KN E+ ++  L
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVL 57

Query: 399 QHRNLVRLL 407
            H N+++L+
Sbjct: 58  DHVNIIKLV 66

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGF 409
           +G+G F +V     + +G+E+A+K + K   +    ++   EV ++  L H N+V+L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE- 81

Query: 410 CLEGEEKI-LVYEF 422
            +E E+ + L+ E+
Sbjct: 82  VIETEKTLYLIMEY 95

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 14/94 (14%)

Query: 343 ATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN-----EVVLVA 396
           AT+++    ++G G +G VYK     SG  +A+K +   +G G           EV L+ 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 397 KLQ---HRNLVRLL----GFCLEGEEKI-LVYEF 422
           +L+   H N+VRL+        + E K+ LV+E 
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH 100

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG+V  G    +G ++AVK L++    S     + K E+  +   +H ++++L
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 8/77 (10%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 352 KLGEGGFGEVYKG---VLPSGQEIAVKRL---SKASGQGAEEFKNEVVLVAKLQHRNLVR 405
             G     + ++     L   +++A+  +           +E  +  + ++++    + R
Sbjct: 38  FHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 406 LLGFCLEGEEKILVYEF 422
           +L         ++V E+
Sbjct: 96  VLDVVHTRAGGLVVAEW 112

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 19/93 (20%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKN----EVVLVAK 397
           +K+    K+G+G FGEV+K     +GQ++A+K   +        E F      E+ ++  
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK----EGFPITALREIKILQL 72

Query: 398 LQHRNLVRLLGFCLEGEEKI--------LVYEF 422
           L+H N+V L+  C               LV++F
Sbjct: 73  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDF 105

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 17/89 (19%)

Query: 336 DFETIEVATNKFSTDNK------LGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEE-- 387
           +    ++     +  +       +  G +G V  GV   G  +A+KR+      G     
Sbjct: 7   EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66

Query: 388 FKN---------EVVLVAKLQHRNLVRLL 407
             +         E+ L+    H N++ L 
Sbjct: 67  LSDSFLCKRVLREIRLLNHFHHPNILGLR 95

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRL 406
           LG G FG+V  G    +G ++AVK L++    S     + + E+  +   +H ++++L
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEI------AVKRLSKASGQGAEEFK 389
             +     +G+GGFG +Y   + S + +       VK     +G    E K
Sbjct: 35  AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELK 85

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 331 ESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFK 389
           ES   ++   +     +    KLG G + EV++ + + + +++ VK L        ++ K
Sbjct: 26  ESHVVEWGNQD----DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIK 78

Query: 390 NEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFT-LKNKD 428
            E+ ++  L+   N++ L     +   +     F  + N D
Sbjct: 79  REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD 119

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.2 bits (98), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRL 377
           + T K     K+GEG FGEV++ +      +A+K +
Sbjct: 17  LPTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKII 51

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLG 408
           LGEG FG+V       + Q++A+K +S+            + E+  +  L+H ++++L  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76

Query: 409 FCLEGEEKI-LVYEF 422
             +     I +V E+
Sbjct: 77  V-ITTPTDIVMVIEY 90

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 331 ESLQFDFE-TIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEF 388
             L+   E   +          ++G G +G V K V  PSGQ +AVKR+        E+ 
Sbjct: 7   GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS---TVDEKE 63

Query: 389 KNEV-----VLVAKLQHRNLVRLLG-FCLEGE 414
           + ++     V++       +V+  G    EG+
Sbjct: 64  QKQLLMDLDVVMRSSDCPYIVQFYGALFREGD 95

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSK---ASGQGAEEFKNEVVLVAKLQH 400
           LG+       +     +G+   V              ++ K EV+ +  L+ 
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH-RN 402
           N++    K+G G FG++Y G  + +G+E+A+K     +     +   E  +   +Q    
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 66

Query: 403 LVRLLGFCLEGEEKILVYE 421
           +  +     EG+  ++V E
Sbjct: 67  IPTIRWCGAEGDYNVMVME 85

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNL 403
           NKF    K+G G FGE+Y G  + + +E+A+K  +  +     +   E  +   LQ    
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTG 64

Query: 404 V-RLLGFCLEGEEKILVYE 421
           +  +  F +EG+  +LV +
Sbjct: 65  IPNVRWFGVEGDYNVLVMD 83

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 19/99 (19%)

Query: 337 FETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKR-LSKASGQGAEEFKN---- 390
            E      ++F  +   G+G FG V  G    +G  +A+K+ +          F+N    
Sbjct: 15  DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR------FRNRELQ 68

Query: 391 EVVLVAKLQHRNLVRLLGFCLEGEEK-------ILVYEF 422
            +  +A L H N+V+L  +     E+        +V E+
Sbjct: 69  IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           +G G FG         + + +AVK + + +    E  + E++    L+H N+VR 
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRF 81

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 339 TIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKR 376
           ++EV  +      +LG G +G V K   +PSGQ +AVKR
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKR 39

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 13/107 (12%), Positives = 47/107 (43%), Gaps = 21/107 (19%)

Query: 311 AKKKYNAVPESNADNDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSG 369
           ++++     + ++     ++     D++      +++   + +G G +G V +       
Sbjct: 23  SQQEGQQRKQHHSSKPTASMPRPHSDWQI----PDRYEIRHLIGTGSYGHVCEAYDKLEK 78

Query: 370 QEIAVKRLSKASGQGAEEFKN---------EVVLVAKLQHRNLVRLL 407
           + +A+K++ +        F++         E+ ++ +L H ++V++L
Sbjct: 79  RVVAIKKILRV-------FEDLIDCKRILREIAILNRLNHDHVVKVL 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	437
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.95
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.94
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.87
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.65
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.64
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.62
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.55
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.53
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.53
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.53
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.5
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.47
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.46
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.46
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.43
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.43
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.42
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.41
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.35
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.32
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.27
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.25
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.25
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.21
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.2
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.2
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.19
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.19
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.18
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.18
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.18
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.17
3uqc_A	286	Probable conserved transmembrane protein; structur	99.17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.16
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.16
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.16
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.16
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.15
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.14
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.13
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.13
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.13
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.12
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.1
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.1
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.1
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.1
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.1
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.1
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.1
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.1
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.09
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.07
3niz_A	311	Rhodanese family protein; structural genomics, str	99.07
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.06
3bhy_A	283	Death-associated protein kinase 3; death associate	99.06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.03
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.03
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.03
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.03
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.03
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.03
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.03
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.03
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.02
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.02
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.02
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.02
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.02
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.02
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.01
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.01
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.01
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.01
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.01
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.01
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.01
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.99
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.99
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.99
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.99
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.99
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.99
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.98
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.98
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.98
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.98
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.98
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.95
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.94
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.93
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.93
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.92
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.92
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.92
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.91
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.91
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.9
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.89
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.89
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.88
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.88
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.88
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.88
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.87
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.86
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.86
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.85
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.85
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.85
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.85
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.84
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.84
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.84
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.83
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.83
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.8
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.8
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.8
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.79
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.78
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.78
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.77
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.76
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.75
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.75
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.75
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.74
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.74
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.73
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.73
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.72
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.72
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.71
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.71
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.71
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.7
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.7
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.7
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.69
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.68
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.66
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.66
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.65
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.65
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.63
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.62
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.6
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.59
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.56
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.55
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.54
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.52
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.48
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.44
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.42
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.42
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.41
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.36
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.16
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.96
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.72
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.69
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.24
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.1
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.76
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.93
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	93.89
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.29
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	90.52
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	89.66
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	88.55
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	88.29
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	86.76
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	86.63
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	83.64
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	83.26
3ats_A	357	Putative uncharacterized protein; hypothetical pro	83.09

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.95  E-value=4.6e-28  Score=191.84  Aligned_cols=106  Identities=19%  Similarity=0.505  Sum_probs=94.8

Q ss_pred             CcccccccCCCCCccCCCChHHHHHHHHHHhcccccCCCCCCCCCceeeccCC-CCCeEEEEEEccCCCCccchHHHHHH
Q 013711           28 DREYATHVCSTTANFTRNSTYEKNLNLLLSSIPTNASRGNGFSSGFFNATAGQ-DPNRVYGLFLCRGDQTTSDCQDCVTF  106 (437)
Q Consensus        28 ~~~~~~~~C~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~~~~~~~~~~~-~~~~vygl~qC~~D~~~~~C~~Cl~~  106 (437)
                      ++.++++.|++ ++++++++|++||+.||+.|+++++.   ...+|++++.+. ++++||||+|||||+++++|..||+.
T Consensus         2 ~t~~v~~~Cn~-~~~t~~s~f~~nl~~ll~~L~~~a~~---s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~   77 (108)
T 3a2e_A            2 NTAFVSSACNT-QKIPSGSPFNRNLRAMLADLRQNTAF---SGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSN   77 (108)
T ss_dssp             CCCEEEEEECS-SBCCTTCTHHHHHHHHHHHHHHHGGG---TTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHH
T ss_pred             CcceeeeecCC-CccCCCChHHHHHHHHHHHHHhhCcc---ccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHH
Confidence            46788999965 79999999999999999999988852   245577766654 45899999999999999999999999


Q ss_pred             HHHHHhhhCCCCceeEEEccceEEEEecccc
Q 013711          107 AARDVLQLCPVSKETILWYAECLLRYSDQSI  137 (437)
Q Consensus       107 a~~~~~~~c~~~~~~~i~~~~C~~Ry~~~~f  137 (437)
                      |+.+++++||+++||+||+++|++|||+++|
T Consensus        78 a~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           78 LVNRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.87  E-value=2.8e-22  Score=158.52  Aligned_cols=103  Identities=27%  Similarity=0.459  Sum_probs=95.2

Q ss_pred             eEEeecccCCCchhHHHHHHHHHHHHHHHHHhccCccceeeeccccccceeeEEeeccCCCChhhHHHHHHHhhhccccc
Q 013711          146 TVSLLNTQNVTDQGRLNELVGTQMSQVVTQAVSNTKRFATRKANFTTFQTLYSLAQCTPDLSSSDCNTCLRGAVARLPSC  225 (437)
Q Consensus       146 ~~~~~~~~~~~~~~~f~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~y~laQC~~dl~~~~C~~Cl~~~~~~~~~~  225 (437)
                      ....|+..+++..+.|+.++..||..|...|+.++..|+++.....+.++||||+||++||++.+|+.||+.++.+++++
T Consensus         6 v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~   85 (108)
T 3a2e_A            6 VSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSI   85 (108)
T ss_dssp             EEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHH
T ss_pred             eeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34578888888888999999999999999998888888888777667789999999999999999999999999999999


Q ss_pred             cCCCCCceEEccccceeeecccc
Q 013711          226 CSGKQGGRVLFPSCNVRYELYPF  248 (437)
Q Consensus       226 c~~~~~g~v~~~~C~~r~~~~~f  248 (437)
                      |++++||+|+.++|++||+.++|
T Consensus        86 C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           86 CNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             TTSBSSEEEEETTEEEEEESSCC
T ss_pred             CCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.65  E-value=1.3e-16  Score=150.39  Aligned_cols=88  Identities=33%  Similarity=0.584  Sum_probs=75.7

Q ss_pred             hcccccccCccccccceeEEEEEeC------CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      ..++|.+.++||+|+||.||+|.+.      ++..||||+++..+....++|.+|+++|++++|||||+++|+|.+++..
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            3466788899999999999999863      3678999999876666677899999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|.-
T Consensus        91 ~lV~Ey~-~~G~L~~  104 (299)
T 4asz_A           91 IMVFEYM-KHGDLNK  104 (299)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             EEEEEcC-CCCcHHH
Confidence            9999999 9999963

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.64  E-value=2e-16  Score=151.16  Aligned_cols=86  Identities=33%  Similarity=0.584  Sum_probs=76.7

Q ss_pred             cccccccCccccccceeEEEEEeC------CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+++.+.++||+|+||.||+|.+.      ++..||||+++..+....++|.+|+++|++++|||||+++|+|.+++..+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            356677889999999999999864      36789999998766666788999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|.
T Consensus       120 lV~Ey~-~~G~L~  131 (329)
T 4aoj_A          120 MVFEYM-RHGDLN  131 (329)
T ss_dssp             EEEECC-TTCBHH
T ss_pred             EEEEcC-CCCcHH
Confidence            999999 999996

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.62  E-value=5e-16  Score=147.03  Aligned_cols=85  Identities=35%  Similarity=0.560  Sum_probs=72.8

Q ss_pred             ccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.+...++||+|+||.||+|.+.      +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.++++.+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            44566789999999999999862      46789999997543 344678999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|.
T Consensus       106 lV~Ey~-~~G~L~  117 (308)
T 4gt4_A          106 MIFSYC-SHGDLH  117 (308)
T ss_dssp             EEEECC-SSCBHH
T ss_pred             EEEEcC-CCCcHH
Confidence            999999 999995

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.55  E-value=4.6e-15  Score=141.91  Aligned_cols=86  Identities=31%  Similarity=0.375  Sum_probs=77.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ..|+..++||+|+||.||++... +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++.+||||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            45777889999999999999864 68999999997655555677899999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       +||+|+-
T Consensus       154 -~gg~L~~  160 (346)
T 4fih_A          154 -EGGALTD  160 (346)
T ss_dssp             -TTEEHHH
T ss_pred             -CCCcHHH
Confidence             9999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.53  E-value=1e-14  Score=139.69  Aligned_cols=86  Identities=24%  Similarity=0.407  Sum_probs=70.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.+|++|+|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            4688899999999999999986 46899999999653  23345679999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ +||+|+-
T Consensus       104 y~-~gg~L~~  112 (350)
T 4b9d_A          104 YC-EGGDLFK  112 (350)
T ss_dssp             CC-TTCBHHH
T ss_pred             CC-CCCcHHH
Confidence            99 9999963

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.53  E-value=7.4e-15  Score=138.56  Aligned_cols=88  Identities=25%  Similarity=0.504  Sum_probs=73.8

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      |++..+++.+.++||+|+||.||+|.+.  ..||||+++...  .+..+.|.+|+.+|++++|||||+++|++.+ +.++
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~  107 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA  107 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence            4556677888899999999999999974  369999997432  3345789999999999999999999998764 5689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ +||+|+-
T Consensus       108 iVmEy~-~gGsL~~  120 (307)
T 3omv_A          108 IVTQWC-EGSSLYK  120 (307)
T ss_dssp             EEEECC-SSCBHHH
T ss_pred             EEEEcC-CCCCHHH
Confidence            999999 9999963

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=142.75  Aligned_cols=87  Identities=31%  Similarity=0.370  Sum_probs=78.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+.|...++||+|+||.||++... +|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            356888899999999999999864 6899999999766555667799999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      | +||+|+-
T Consensus       230 ~-~gG~L~~  237 (423)
T 4fie_A          230 L-EGGALTD  237 (423)
T ss_dssp             C-TTEEHHH
T ss_pred             C-CCCcHHH
Confidence            9 9999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.50  E-value=2.4e-14  Score=134.86  Aligned_cols=86  Identities=23%  Similarity=0.284  Sum_probs=76.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .+++.||||++...   .....+.+.+|+.+|++++|||||++++++.+++.++|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4588889999999999999986 46899999999642   2345678999999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ +||+|+-
T Consensus       112 Ey~-~gG~L~~  121 (311)
T 4aw0_A          112 SYA-KNGELLK  121 (311)
T ss_dssp             CCC-TTEEHHH
T ss_pred             ecC-CCCCHHH
Confidence            999 9999963

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.47  E-value=4.7e-14  Score=133.40  Aligned_cols=82  Identities=23%  Similarity=0.429  Sum_probs=66.9

Q ss_pred             cccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHH--HHHHHHHhcCCCCCccceEeEEEeCC----EeEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEF--KNEVVLVAKLQHRNLVRLLGFCLEGE----EKILV  419 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~--~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv  419 (437)
                      ++.+.++||+|+||.||+|++ +|+.||||+++...   .+++  ..|+..+.+++|||||+++|++.+++    .++||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            466788999999999999998 68999999996532   2333  45566667889999999999998753    68999


Q ss_pred             EecccCCCccccc
Q 013711          420 YEFTLKNKDNWIG  432 (437)
Q Consensus       420 ~E~~~~~gsL~l~  432 (437)
                      |||+ ++|+|+-.
T Consensus        80 ~Ey~-~~gsL~~~   91 (303)
T 3hmm_A           80 SDYH-EHGSLFDY   91 (303)
T ss_dssp             EECC-TTCBHHHH
T ss_pred             ecCC-CCCcHHHH
Confidence            9999 99998643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.46  E-value=8.9e-14  Score=130.14  Aligned_cols=84  Identities=27%  Similarity=0.368  Sum_probs=70.2

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILV  419 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv  419 (437)
                      +...++||+|+||.||+|... ++..||+|.+...  .....+.|.+|+.+|++++|||||++++++..    .+.++||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            355678999999999999864 5889999999643  23345679999999999999999999999865    3458999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus       108 mEy~-~gg~L~~  118 (290)
T 3fpq_A          108 TELM-TSGTLKT  118 (290)
T ss_dssp             EECC-CSCBHHH
T ss_pred             EeCC-CCCCHHH
Confidence            9999 9999863

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.46  E-value=5.7e-14  Score=135.31  Aligned_cols=97  Identities=24%  Similarity=0.394  Sum_probs=80.6

Q ss_pred             ccchhhHHhhcccccccCccccccceeEEEEEeCC------CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCC-CCccc
Q 013711          334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQH-RNLVR  405 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H-~niv~  405 (437)
                      .++.+.|+++.++|.+.+.||+|+||.||+|.+..      ++.||||.+..... ...++|.+|+.+|.+++| ||||+
T Consensus        53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            35556788889999999999999999999998632      35899999976432 335679999999999965 99999


Q ss_pred             eEeEEEeC-CEeEEEEecccCCCcccc
Q 013711          406 LLGFCLEG-EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       406 l~g~~~~~-~~~~lv~E~~~~~gsL~l  431 (437)
                      ++|+|.+. +.++|||||| ++|+|.-
T Consensus       133 l~g~~~~~~~~~~iV~Ey~-~~G~L~~  158 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFC-KFGNLST  158 (353)
T ss_dssp             EEEEECCTTSCCEEEEECC-TTEEHHH
T ss_pred             EEEEEEecCCEEEEEEEcC-CCCCHHH
Confidence            99999764 5689999999 9999863

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.43  E-value=1.3e-13  Score=131.50  Aligned_cols=82  Identities=24%  Similarity=0.252  Sum_probs=71.6

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+.|...++||+|+||.||++.. .+|+.||||+++....     ..+|+.+|++++|||||++++++.+++.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            35677788999999999999986 4689999999975322     25799999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + +||+|+-
T Consensus       132 ~-~gg~L~~  139 (336)
T 4g3f_A          132 L-EGGSLGQ  139 (336)
T ss_dssp             C-TTCBHHH
T ss_pred             c-CCCcHHH
Confidence            9 9999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.43  E-value=1.6e-13  Score=129.27  Aligned_cols=86  Identities=26%  Similarity=0.358  Sum_probs=70.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCC--------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE--------  414 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--------  414 (437)
                      ++|+..+.||+|+||.||++.. .+|+.||||.++.... ...+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3577889999999999999986 4689999999965432 33467999999999999999999999987543        


Q ss_pred             ----EeEEEEecccCCCcccc
Q 013711          415 ----EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       415 ----~~~lv~E~~~~~gsL~l  431 (437)
                          .++|||||+ ++|+|.-
T Consensus        85 ~~~~~l~ivmE~~-~gg~L~~  104 (299)
T 4g31_A           85 SPKVYLYIQMQLC-RKENLKD  104 (299)
T ss_dssp             --CEEEEEEEECC-CSCCHHH
T ss_pred             CCCcEEEEEEecC-CCCcHHH
Confidence                379999999 9999853

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.42  E-value=2.8e-13  Score=125.69  Aligned_cols=84  Identities=24%  Similarity=0.451  Sum_probs=68.5

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||+|.++...   ....+.+.+|+.+|++++|||||++++++.+++..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5688899999999999999986 468999999996532   234567999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ + |+|+
T Consensus        93 Ey~-~-g~L~  100 (275)
T 3hyh_A           93 EYA-G-NELF  100 (275)
T ss_dssp             ECC-C-EEHH
T ss_pred             eCC-C-CCHH
Confidence            999 5 5665

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.41  E-value=6.8e-14  Score=131.67  Aligned_cols=86  Identities=24%  Similarity=0.300  Sum_probs=68.6

Q ss_pred             ccccccCccccccceeEEEEEe----CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++|++.+.||+|+||.||+++.    ..++.||||.++...  ......+.+|+.+|++++|||||++++++.+++.++|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5688899999999999999974    246899999996532  2233468899999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ +||+|+-
T Consensus       104 vmEy~-~gg~L~~  115 (304)
T 3ubd_A          104 ILDFL-RGGDLFT  115 (304)
T ss_dssp             EECCC-TTCEEHH
T ss_pred             EEEcC-CCCCHHH
Confidence            99999 9999964

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.35  E-value=1.1e-12  Score=134.77  Aligned_cols=86  Identities=23%  Similarity=0.429  Sum_probs=77.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||+|.+........+.+.+|+.+|+.++|||||++++++.+...++|||||+
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5688899999999999999986 468999999997655555677999999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       +||+|+-
T Consensus       237 -~gg~L~~  243 (573)
T 3uto_A          237 -SGGELFE  243 (573)
T ss_dssp             -CCCBHHH
T ss_pred             -CCCcHHH
Confidence             9999953

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.32  E-value=1.9e-12  Score=123.34  Aligned_cols=97  Identities=40%  Similarity=0.667  Sum_probs=84.8

Q ss_pred             ccchhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      .+++.++...+++|...+.||+|+||.||++...+++.||+|.+........+.+.+|+.+++.++||||+++++++...
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            34455566678899999999999999999999888999999998766555667899999999999999999999999999


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      +..++||||+ ++|+|.-
T Consensus       108 ~~~~lv~e~~-~~~~L~~  124 (321)
T 2qkw_B          108 NEMILIYKYM-ENGNLKR  124 (321)
T ss_dssp             TCCEEEEECC-TTCBTGG
T ss_pred             CeEEEEEEcC-CCCcHHH
Confidence            9999999999 9999854

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.27  E-value=1.4e-11  Score=117.36  Aligned_cols=98  Identities=30%  Similarity=0.305  Sum_probs=82.1

Q ss_pred             cccchhhHHhhccc----------ccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCC
Q 013711          333 LQFDFETIEVATNK----------FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHR  401 (437)
Q Consensus       333 ~~~~~~~~~~~~~~----------~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~  401 (437)
                      ..+++++++.+++.          +...+.||+|+||.||++... +|+.||||++........+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            34566666555443          556678999999999999975 6899999999776666678899999999999999


Q ss_pred             CccceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          402 NLVRLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       402 niv~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ||+++++++...+..++||||+ ++|+|.-
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~-~~~~L~~  131 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFL-QGGALTD  131 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCC-CSCBHHH
T ss_pred             CcceEEEEEEECCEEEEEEecC-CCCCHHH
Confidence            9999999999999999999999 9998854

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.25  E-value=5.1e-12  Score=123.69  Aligned_cols=84  Identities=18%  Similarity=0.357  Sum_probs=69.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~  415 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4688889999999999999986 469999999996532  23346788999999999999999999987643      56


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      +||||||+ + |+|+
T Consensus       134 ~~ivmE~~-~-g~L~  146 (398)
T 4b99_A          134 VYVVLDLM-E-SDLH  146 (398)
T ss_dssp             EEEEEECC-S-EEHH
T ss_pred             EEEEEeCC-C-CCHH
Confidence            89999999 6 5554

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.25  E-value=5.7e-12  Score=120.16  Aligned_cols=98  Identities=42%  Similarity=0.751  Sum_probs=85.4

Q ss_pred             ccccchhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEE
Q 013711          332 SLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFC  410 (437)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~  410 (437)
                      ...+++.++....++|...+.||+|+||.||++...+++.||||++..... .....+.+|+.++..++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            345788899999999999999999999999999987899999999975432 2334789999999999999999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+..++||||+ ++|+|.
T Consensus        97 ~~~~~~~lv~e~~-~~~~L~  115 (326)
T 3uim_A           97 MTPTERLLVYPYM-ANGSVA  115 (326)
T ss_dssp             CCSSCCEEEEECC-TTCBHH
T ss_pred             ecCCceEEEEEec-cCCCHH
Confidence            9999999999999 999885

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.25  E-value=1.1e-11  Score=120.04  Aligned_cols=87  Identities=17%  Similarity=0.273  Sum_probs=74.5

Q ss_pred             hhcccccccCccccccceeEEEEEe----CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  416 (437)
                      ...+.|.+.++||+|+||.||++..    ..++.||+|.+...  .....+.+|+.+|..+ +|||||++++++.+.+..
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            3456799999999999999999974    24678999998653  3456788999999998 699999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|+-
T Consensus        96 ~lvmE~~-~g~~L~~  109 (361)
T 4f9c_A           96 VIAMPYL-EHESFLD  109 (361)
T ss_dssp             EEEEECC-CCCCHHH
T ss_pred             EEEEeCC-CcccHHH
Confidence            9999999 9999863

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.22  E-value=3.9e-11  Score=112.92  Aligned_cols=87  Identities=25%  Similarity=0.408  Sum_probs=77.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            35688889999999999999985 56899999999766556677899999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++|+|.-
T Consensus        99 ~-~~~~L~~  106 (297)
T 3fxz_A           99 L-AGGSLTD  106 (297)
T ss_dssp             C-TTCBHHH
T ss_pred             C-CCCCHHH
Confidence            9 9999853

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.22  E-value=2.5e-11  Score=114.80  Aligned_cols=87  Identities=21%  Similarity=0.355  Sum_probs=77.3

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|...+.||+|+||.||++... ++..||+|.+........+.|.+|+.++.+++||||+++++++...+..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            356778899999999999999974 5899999998765555667899999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++|+|.-
T Consensus        89 ~-~~~~L~~   96 (310)
T 3s95_A           89 I-KGGTLRG   96 (310)
T ss_dssp             C-TTCBHHH
T ss_pred             c-CCCcHHH
Confidence            9 9999853

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.21  E-value=3.1e-11  Score=113.90  Aligned_cols=98  Identities=40%  Similarity=0.659  Sum_probs=84.4

Q ss_pred             ccccchhhHHhhccccccc------CccccccceeEEEEEeCCCCEEEEEEccccC----ccCHHHHHHHHHHHhcCCCC
Q 013711          332 SLQFDFETIEVATNKFSTD------NKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHR  401 (437)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~------~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~  401 (437)
                      ...+++.++...+++|...      +.||+|+||.||++.. ++..||+|.+....    ....+.+.+|+.++++++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            4567888999888888776      8999999999999997 68899999986432    22356799999999999999


Q ss_pred             CccceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          402 NLVRLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       402 niv~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ||+++++++...+..++||||+ ++|+|.-
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~  119 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYM-PNGSLLD  119 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECC-TTCBHHH
T ss_pred             CeEEEEEEEecCCceEEEEEec-CCCcHHH
Confidence            9999999999999999999999 9998853

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.20  E-value=1.8e-11  Score=122.39  Aligned_cols=92  Identities=27%  Similarity=0.407  Sum_probs=80.1

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .+.++...++|...+.||+|+||.||+|.+.++..||||.++... ...+.|.+|+.+|++++|||||++++++. .+..
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~  257 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI  257 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence            345566778889999999999999999999888899999997643 45788999999999999999999999886 6678


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|.-
T Consensus       258 ~lv~e~~-~~g~L~~  271 (454)
T 1qcf_A          258 YIITEFM-AKGSLLD  271 (454)
T ss_dssp             EEEECCC-TTCBHHH
T ss_pred             EEEEeec-CCCcHHH
Confidence            9999999 9999853

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.20  E-value=2.5e-11  Score=112.36  Aligned_cols=88  Identities=28%  Similarity=0.477  Sum_probs=77.5

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ...++|...+.||+|+||.||++...++..||+|.+.... ...+++.+|+.++.+++||||+++++++.+.+..++|||
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A            7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             eChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            3456788889999999999999998888899999997543 345789999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++++|.-
T Consensus        86 ~~-~~~~L~~   94 (269)
T 4hcu_A           86 FM-EHGCLSD   94 (269)
T ss_dssp             CC-TTCBHHH
T ss_pred             eC-CCCcHHH
Confidence            99 9998863

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.19  E-value=1e-11  Score=121.10  Aligned_cols=91  Identities=25%  Similarity=0.456  Sum_probs=77.6

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .+....++|...+.||+|+||.||+|... +++.||||.++.... ...+.|.+|+.+|++++||||+++++++...+..
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence            34455677888999999999999999985 689999999875422 2234688999999999999999999999998999


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      +|||||+ ++|+|.
T Consensus       188 ~lv~e~~-~~g~L~  200 (377)
T 3cbl_A          188 YIVMELV-QGGDFL  200 (377)
T ss_dssp             EEEEECC-TTCBHH
T ss_pred             EEEEEcC-CCCCHH
Confidence            9999999 999885

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.19  E-value=1.8e-11  Score=116.01  Aligned_cols=94  Identities=24%  Similarity=0.446  Sum_probs=78.5

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      ...++....++|.+.+.||+|+||.||++.. ++..||||++....  ....+.+.+|+.++++++||||+++++++...
T Consensus        28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP  106 (309)
T ss_dssp             ----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             CcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            3345556677889999999999999999987 68899999986543  23346799999999999999999999999999


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      +..++||||+ ++|+|.-
T Consensus       107 ~~~~lv~e~~-~~~~L~~  123 (309)
T 3p86_A          107 PNLSIVTEYL-SRGSLYR  123 (309)
T ss_dssp             TCCEEEEECC-TTCBHHH
T ss_pred             CceEEEEecC-CCCcHHH
Confidence            9999999999 9999853

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.19  E-value=2.9e-11  Score=124.38  Aligned_cols=86  Identities=27%  Similarity=0.316  Sum_probs=70.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHH---HHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKN---EVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|.+.++||+|+||.||++... +|+.||||+++..   .......+.+   ++.++..++|||||++++++.+.+.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            56888999999999999999864 6899999999642   1222333333   467778889999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ +||+|+-
T Consensus       269 lVmEy~-~GGdL~~  281 (689)
T 3v5w_A          269 FILDLM-NGGDLHY  281 (689)
T ss_dssp             EEECCC-CSCBHHH
T ss_pred             EEEecC-CCCcHHH
Confidence            999999 9999964

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.18  E-value=3.1e-11  Score=111.58  Aligned_cols=87  Identities=28%  Similarity=0.411  Sum_probs=76.9

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ...++|...+.||+|+||.||++...++..||+|.++... ...+++.+|+.++.+++||||+++++++......++|||
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            3456788889999999999999999888899999997543 345789999999999999999999999999899999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        84 ~~-~~~~L~   91 (268)
T 3sxs_A           84 YI-SNGCLL   91 (268)
T ss_dssp             CC-TTCBHH
T ss_pred             cc-CCCcHH
Confidence            99 999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.18  E-value=1.7e-11  Score=123.99  Aligned_cols=92  Identities=32%  Similarity=0.544  Sum_probs=79.7

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      +.++....+|...++||+|+||.||+|.+.. +..||||.++... ...++|.+|+.+|++++|||||++++++...+..
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence            3445556778889999999999999999854 7899999997543 3568899999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|.-
T Consensus       292 ~lv~E~~-~~g~L~~  305 (495)
T 1opk_A          292 YIITEFM-TYGNLLD  305 (495)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             EEEEEcc-CCCCHHH
Confidence            9999999 9999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.18  E-value=3.7e-11  Score=114.84  Aligned_cols=87  Identities=21%  Similarity=0.366  Sum_probs=76.0

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45788899999999999999986 57899999999653  2234567899999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++|+|+-
T Consensus        94 e~~-~~~~L~~  103 (328)
T 3fe3_A           94 EYA-SGGEVFD  103 (328)
T ss_dssp             CCC-TTCBHHH
T ss_pred             ECC-CCCcHHH
Confidence            999 9999853

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.18  E-value=3.2e-11  Score=112.46  Aligned_cols=92  Identities=25%  Similarity=0.420  Sum_probs=77.2

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..+....++|...+.||+|+||.||++...++..||+|.+.... ...+++.+|+.++.+++||||+++++++...+..+
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   95 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF   95 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence            44455667888899999999999999999888899999997543 34578999999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++|+|.-
T Consensus        96 lv~e~~-~~~~L~~  108 (283)
T 3gen_A           96 IITEYM-ANGCLLN  108 (283)
T ss_dssp             EEECCC-TTCBHHH
T ss_pred             EEEecc-CCCcHHH
Confidence            999999 9998853

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.17  E-value=3.6e-11  Score=120.07  Aligned_cols=88  Identities=27%  Similarity=0.456  Sum_probs=76.5

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC-EeE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE-EKI  417 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~  417 (437)
                      .++...++|...+.||+|+||.||+|.+ .++.||||.++...  ..+.|.+|+.+|++++||||+++++++...+ ..+
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  263 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY  263 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence            3445567788899999999999999998 57899999997543  4578999999999999999999999988765 799


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|.
T Consensus       264 iv~e~~-~~g~L~  275 (450)
T 1k9a_A          264 IVTEYM-AKGSLV  275 (450)
T ss_dssp             EEEECC-TTCBHH
T ss_pred             EEEEec-CCCcHH
Confidence            999999 999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.17  E-value=6.1e-11  Score=111.04  Aligned_cols=86  Identities=8%  Similarity=0.067  Sum_probs=74.6

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc---CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ---GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +.|.+.+.||+|+||.||++... .++.||||.+......   ..+.+.+|+.++.+++||||+++++++...+..+|||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            45778899999999999999974 4899999999754332   2367999999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus       111 e~~-~g~~L~~  120 (286)
T 3uqc_A          111 EWI-RGGSLQE  120 (286)
T ss_dssp             ECC-CEEEHHH
T ss_pred             Eec-CCCCHHH
Confidence            999 9888764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.16  E-value=3e-11  Score=120.74  Aligned_cols=90  Identities=29%  Similarity=0.482  Sum_probs=78.1

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.++...++|...++||+|+||.||+|.+.++..||||.++... ...++|.+|+.+|++++||||+++++++.+ +..+
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~  254 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  254 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence            44556677888899999999999999999777889999997543 346789999999999999999999999865 6789


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|.
T Consensus       255 iv~e~~-~~gsL~  266 (452)
T 1fmk_A          255 IVTEYM-SKGSLL  266 (452)
T ss_dssp             EEECCC-TTCBHH
T ss_pred             EEehhh-cCCCHH
Confidence            999999 999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.16  E-value=9.1e-11  Score=113.61  Aligned_cols=88  Identities=23%  Similarity=0.318  Sum_probs=76.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .+.|.+.+.||+|+||.||++... +|+.+|+|.++....      ...+.+.+|+.++.+++||||+++++++......
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            356888899999999999999864 589999999965322      2357899999999999999999999999999999


Q ss_pred             EEEEecccCCCccccc
Q 013711          417 ILVYEFTLKNKDNWIG  432 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l~  432 (437)
                      +|||||+ ++|+|+-.
T Consensus        91 ~lv~e~~-~gg~L~~~  105 (361)
T 2yab_A           91 VLILELV-SGGELFDF  105 (361)
T ss_dssp             EEEEECC-CSCBHHHH
T ss_pred             EEEEEcC-CCCcHHHH
Confidence            9999999 99998643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.16  E-value=2.4e-11  Score=118.33  Aligned_cols=87  Identities=26%  Similarity=0.447  Sum_probs=74.5

Q ss_pred             cccccccCccccccceeEEEEEeC----CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|...+.||+|+||.||+|...    .+..||||.++... ....+.|.+|+.++.+++||||+++++++...+..+|
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            457888999999999999999864    46789999997542 3345679999999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       124 v~e~~-~~~sL~~  135 (373)
T 2qol_A          124 VTEYM-ENGSLDS  135 (373)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEeCC-CCCcHHH
Confidence            99999 9999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.16  E-value=2.1e-11  Score=121.11  Aligned_cols=96  Identities=19%  Similarity=0.214  Sum_probs=80.9

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeCC-CCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEE
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCL  411 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  411 (437)
                      .+.++....++|...++||+|+||.||++.... ++.+|+|+++...   ....+.+.+|..++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            445666778899999999999999999999754 7889999996421   122345889999999999999999999999


Q ss_pred             eCCEeEEEEecccCCCccccc
Q 013711          412 EGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +.+..+|||||+ ++|+|+-.
T Consensus       145 ~~~~~~lV~Ey~-~gg~L~~~  164 (437)
T 4aw2_A          145 DDNNLYLVMDYY-VGGDLLTL  164 (437)
T ss_dssp             CSSEEEEEECCC-TTCBHHHH
T ss_pred             eCCEEEEEEecC-CCCcHHHH
Confidence            999999999999 99998643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.15  E-value=5.4e-11  Score=115.78  Aligned_cols=82  Identities=29%  Similarity=0.458  Sum_probs=67.9

Q ss_pred             cccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccCC
Q 013711          348 STDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKN  426 (437)
Q Consensus       348 ~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~~  426 (437)
                      ...+.||+|+||.||++.. .+|+.||+|+++.......+.+.+|+.++.+++||||+++++++...+..+|||||+ ++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~-~~  170 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV-DG  170 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC-TT
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence            3457899999999999986 468999999997655555678999999999999999999999999999999999999 99


Q ss_pred             Cccc
Q 013711          427 KDNW  430 (437)
Q Consensus       427 gsL~  430 (437)
                      |+|+
T Consensus       171 ~~L~  174 (373)
T 2x4f_A          171 GELF  174 (373)
T ss_dssp             CEEH
T ss_pred             CcHH
Confidence            9984

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.15  E-value=3.3e-11  Score=123.04  Aligned_cols=92  Identities=28%  Similarity=0.446  Sum_probs=79.2

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .+.++...++|.+.++||+|+||.||+|.+.++..||||+++... ...++|.+|+.+|++++|+||+++++++.+ +..
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            345566677888999999999999999999777889999997543 346789999999999999999999999865 678


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|.-
T Consensus       337 ~lv~e~~-~~gsL~~  350 (535)
T 2h8h_A          337 YIVTEYM-SKGSLLD  350 (535)
T ss_dssp             EEEECCC-TTEEHHH
T ss_pred             eEeeehh-cCCcHHH
Confidence            9999999 9998853

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.15  E-value=9.1e-11  Score=108.96  Aligned_cols=85  Identities=25%  Similarity=0.431  Sum_probs=76.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.|...+.||+|+||.||++... ++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            46788899999999999999874 47799999997765567788999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        89 -~~~~L~   94 (277)
T 3f3z_A           89 -TGGELF   94 (277)
T ss_dssp             -CSCBHH
T ss_pred             -CCCcHH
Confidence             999884

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.15  E-value=3e-11  Score=119.02  Aligned_cols=94  Identities=20%  Similarity=0.199  Sum_probs=79.6

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      ..++....++|...++||+|+||.||++... +++.+|+|++...   .....+.+.+|+.++..++|||||++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3455666788999999999999999999975 5889999998642   12233458899999999999999999999999


Q ss_pred             CCEeEEEEecccCCCcccc
Q 013711          413 GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l  431 (437)
                      .+..+|||||+ ++|+|+-
T Consensus       141 ~~~~~lV~E~~-~gg~L~~  158 (410)
T 3v8s_A          141 DRYLYMVMEYM-PGGDLVN  158 (410)
T ss_dssp             SSEEEEEECCC-TTEEHHH
T ss_pred             CCEEEEEEeCC-CCCcHHH
Confidence            99999999999 9999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.14  E-value=7.3e-11  Score=112.39  Aligned_cols=70  Identities=30%  Similarity=0.455  Sum_probs=58.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      ++|...+.||+|+||.||++... +++.||||+++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            46788899999999999999975 689999999975332 34567999999999999999999999986643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.14  E-value=6.4e-11  Score=114.28  Aligned_cols=85  Identities=27%  Similarity=0.417  Sum_probs=74.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc-----CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-----SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      +.|...+.||+|+||.||++.. .+++.||||++...     .....+.+.+|+.++..++||||+++++++...+..+|
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4578889999999999999986 46899999998532     12346789999999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++|+|.
T Consensus       104 v~e~~-~g~~L~  114 (351)
T 3c0i_A          104 VFEFM-DGADLC  114 (351)
T ss_dssp             EEECC-SSCBHH
T ss_pred             EEeCC-CCCCHH
Confidence            99999 999984

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.14  E-value=5.4e-11  Score=113.53  Aligned_cols=87  Identities=24%  Similarity=0.436  Sum_probs=74.2

Q ss_pred             cccccccCccccccceeEEEEEeC----CCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+.|.+.+.||+|+||.||++...    .+..||||.++.. .....+.|.+|+.++.+++||||+++++++...+..+|
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            456788899999999999999973    3456999999754 33345679999999999999999999999999899999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       128 v~e~~-~~~~L~~  139 (325)
T 3kul_A          128 VTEYM-ENGSLDT  139 (325)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EeeCC-CCCcHHH
Confidence            99999 9999853

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.13  E-value=9.2e-11  Score=112.51  Aligned_cols=87  Identities=22%  Similarity=0.247  Sum_probs=76.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +++.||+|+++..   .....+.+.+|+.++..++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            356888899999999999999864 5899999999653   234567789999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus        84 ~E~~-~gg~L~~   94 (337)
T 1o6l_A           84 MEYA-NGGELFF   94 (337)
T ss_dssp             EECC-TTCBHHH
T ss_pred             EeCC-CCCcHHH
Confidence            9999 9999853

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.13  E-value=6.7e-11  Score=113.56  Aligned_cols=90  Identities=24%  Similarity=0.345  Sum_probs=76.9

Q ss_pred             HHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEcccc-----CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-----SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      +....++|...+.||+|+||.||++.. .++..||+|++...     .....+.+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            344456788999999999999999986 45789999998642     234457899999999999999999999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..+|||||+ ++|+|.
T Consensus       101 ~~~~lv~e~~-~gg~L~  116 (345)
T 3hko_A          101 QYICLVMELC-HGGHLL  116 (345)
T ss_dssp             SEEEEEEECC-CSCBHH
T ss_pred             CeEEEEEeCC-CCCcHH
Confidence            9999999999 999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.13  E-value=9.5e-11  Score=114.57  Aligned_cols=86  Identities=23%  Similarity=0.359  Sum_probs=76.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.|.+.+.||+|+||.||++... +++.+|+|.+..........+.+|+.+|..++||||+++++++.+....+|||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            56888899999999999999864 58899999997654445567999999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++|+|+-
T Consensus       131 -~gg~L~~  137 (387)
T 1kob_A          131 -SGGELFD  137 (387)
T ss_dssp             -CCCBHHH
T ss_pred             -CCCcHHH
Confidence             9999853

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.13  E-value=8.4e-11  Score=112.06  Aligned_cols=87  Identities=26%  Similarity=0.429  Sum_probs=73.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|.+.+.||+|+||.||++... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..+|||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            56888899999999999999864 689999999864332 2345689999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + ++|+|+-.
T Consensus        87 ~-~~~~L~~~   95 (323)
T 3tki_A           87 C-SGGELFDR   95 (323)
T ss_dssp             C-TTEEGGGG
T ss_pred             C-CCCcHHHH
Confidence            9 99998654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.12  E-value=7.8e-11  Score=108.65  Aligned_cols=87  Identities=29%  Similarity=0.470  Sum_probs=76.9

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ...++|...+.||+|+||.||++...++..||+|.+.... ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             EchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            3446788889999999999999998888899999997543 345789999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus        84 ~~-~~~~L~   91 (267)
T 3t9t_A           84 FM-EHGCLS   91 (267)
T ss_dssp             CC-TTCBHH
T ss_pred             CC-CCCcHH
Confidence            99 998885

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.12  E-value=4.4e-11  Score=116.33  Aligned_cols=88  Identities=23%  Similarity=0.433  Sum_probs=74.7

Q ss_pred             hcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ..++|.+.+.||+|+||.||++...        ++..||||.++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            4567888899999999999999852        34579999997543 23456799999999999 89999999999999


Q ss_pred             CCEeEEEEecccCCCcccc
Q 013711          413 GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l  431 (437)
                      .+..++||||+ ++|+|.-
T Consensus       159 ~~~~~lv~e~~-~~g~L~~  176 (370)
T 2psq_A          159 DGPLYVIVEYA-SKGNLRE  176 (370)
T ss_dssp             SSSCEEEEECC-TTCBHHH
T ss_pred             CCCEEEEEEcC-CCCCHHH
Confidence            99999999999 9999853

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.12  E-value=6.1e-11  Score=110.79  Aligned_cols=87  Identities=34%  Similarity=0.547  Sum_probs=75.9

Q ss_pred             cccccccCccccccceeEEEEEeCC-C-------CEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-G-------QEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~-------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      .++|...+.||+|+||.||++.... +       ..||+|.+........+.+.+|+.++++++||||+++++++..++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            4567888999999999999998632 3       4799999977665667889999999999999999999999999999


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++|+|.-
T Consensus        87 ~~lv~e~~-~~~~L~~  101 (289)
T 4fvq_A           87 NILVQEFV-KFGSLDT  101 (289)
T ss_dssp             CEEEEECC-TTCBHHH
T ss_pred             CEEEEECC-CCCCHHH
Confidence            99999999 9998853

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.12  E-value=5.5e-11  Score=113.98  Aligned_cols=92  Identities=29%  Similarity=0.527  Sum_probs=78.0

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCL  411 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  411 (437)
                      .+....++|...+.||+|+||.||++...      +++.||+|.++... ....+.+.+|+.++.+++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            34455678889999999999999999873      34789999997543 233567999999999999999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ..+..++||||+ ++|+|.-
T Consensus       121 ~~~~~~lv~e~~-~~~~L~~  139 (343)
T 1luf_A          121 VGKPMCLLFEYM-AYGDLNE  139 (343)
T ss_dssp             SSSSCEEEEECC-TTCBHHH
T ss_pred             cCCceEEEEecC-CCCcHHH
Confidence            999999999999 9998853

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.12  E-value=8.8e-11  Score=112.11  Aligned_cols=87  Identities=24%  Similarity=0.391  Sum_probs=69.6

Q ss_pred             cccccccCccccccceeEEEEEe----CCCCEEEEEEccccC----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      .++|...+.||+|+||.||++..    .+++.+|+|+++...    ......+.+|+.++++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            45788899999999999999986    468999999997532    2234568899999999999999999999999999


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .+|||||+ ++|+|+-
T Consensus        96 ~~lv~e~~-~~~~L~~  110 (327)
T 3a62_A           96 LYLILEYL-SGGELFM  110 (327)
T ss_dssp             EEEEEECC-TTEEHHH
T ss_pred             EEEEEeCC-CCCcHHH
Confidence            99999999 9998853

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.11  E-value=3.7e-11  Score=116.06  Aligned_cols=97  Identities=24%  Similarity=0.419  Sum_probs=80.6

Q ss_pred             ccchhhHHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccc
Q 013711          334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVR  405 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~  405 (437)
                      .+....++...++|...+.||+|+||.||++.+      .+++.||||+++... ....+.+.+|+.++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            355667778889999999999999999999974      245789999997543 23346799999999999 8999999


Q ss_pred             eEeEEEeCC-EeEEEEecccCCCcccc
Q 013711          406 LLGFCLEGE-EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       406 l~g~~~~~~-~~~lv~E~~~~~gsL~l  431 (437)
                      +++++...+ ..++||||+ ++|+|.-
T Consensus        91 ~~~~~~~~~~~~~iv~e~~-~~g~L~~  116 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFC-KFGNLST  116 (359)
T ss_dssp             EEEEECSTTSCCEEEEECC-TTEEHHH
T ss_pred             eeeeeecCCCceEEEEEec-CCCcHHH
Confidence            999998755 489999999 9999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.11  E-value=1.6e-10  Score=110.26  Aligned_cols=86  Identities=24%  Similarity=0.370  Sum_probs=75.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.|...+.||+|+||.||++... ++..||+|.+.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45788899999999999999874 589999999865321      24678999999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++|+|.-
T Consensus        91 lv~e~~-~~~~L~~  103 (326)
T 2y0a_A           91 LILELV-AGGELFD  103 (326)
T ss_dssp             EEEECC-CSCBHHH
T ss_pred             EEEEcC-CCCCHHH
Confidence            999999 9999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.11  E-value=6.6e-11  Score=113.07  Aligned_cols=92  Identities=28%  Similarity=0.451  Sum_probs=77.7

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCC------CCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      .++...++|...+.||+|+||.||++....      ...||+|.+.... ....+.+.+|+.++..+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            456667889999999999999999998632      2479999997543 23356799999999999 899999999999


Q ss_pred             EeCCEeEEEEecccCCCcccc
Q 013711          411 LEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ...+..++||||+ ++|+|.-
T Consensus       120 ~~~~~~~lv~e~~-~~g~L~~  139 (333)
T 2i1m_A          120 THGGPVLVITEYC-CYGDLLN  139 (333)
T ss_dssp             CSSSSCEEEEECC-TTEEHHH
T ss_pred             ecCCceEEEEecC-CCCcHHH
Confidence            9999999999999 9988853

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.11  E-value=5.4e-11  Score=111.63  Aligned_cols=87  Identities=25%  Similarity=0.450  Sum_probs=74.4

Q ss_pred             cccccccCccccccceeEEEEEe-----CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  416 (437)
                      .++|...+.||+|+||.||++.+     .+++.||||++........+.+.+|+.++.+++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            45678889999999999999984     35789999999766555567899999999999999999999998653  458


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|.-
T Consensus        89 ~lv~e~~-~~~~L~~  102 (295)
T 3ugc_A           89 KLIMEYL-PYGSLRD  102 (295)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             EEEEEeC-CCCCHHH
Confidence            9999999 9999863

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.10  E-value=1.1e-10  Score=113.21  Aligned_cols=86  Identities=26%  Similarity=0.441  Sum_probs=75.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++|...+.||+|+||.||++... ++..||+|.+....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            456888899999999999999864 58999999996532  233467899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|+
T Consensus       108 e~~-~gg~L~  116 (362)
T 2bdw_A          108 DLV-TGGELF  116 (362)
T ss_dssp             CCC-CSCBHH
T ss_pred             ecC-CCCCHH
Confidence            999 999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.10  E-value=4.8e-11  Score=117.58  Aligned_cols=96  Identities=20%  Similarity=0.215  Sum_probs=80.9

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEE
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCL  411 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  411 (437)
                      .+++.....++|...+.||+|+||.||++... +++.||+|+++...   ....+.+.+|..++..++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            44556667788999999999999999999974 68999999996421   122345889999999999999999999999


Q ss_pred             eCCEeEEEEecccCCCccccc
Q 013711          412 EGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +.+..+|||||+ ++|+|+-.
T Consensus       132 ~~~~~~lVmE~~-~gg~L~~~  151 (412)
T 2vd5_A          132 DENYLYLVMEYY-VGGDLLTL  151 (412)
T ss_dssp             CSSEEEEEECCC-CSCBHHHH
T ss_pred             eCCEEEEEEcCC-CCCcHHHH
Confidence            999999999999 99998643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.10  E-value=1.5e-10  Score=110.23  Aligned_cols=86  Identities=24%  Similarity=0.343  Sum_probs=74.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|...+.||+|+||.||++... +++.+|+|.+.... ...+.+.+|+.++..++||||+++++++.+.+..++||||+
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            56788899999999999999864 57899999986432 33456899999999999999999999999999999999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       ++|+|+-.
T Consensus        84 -~g~~L~~~   91 (321)
T 1tki_A           84 -SGLDIFER   91 (321)
T ss_dssp             -CCCBHHHH
T ss_pred             -CCCCHHHH
Confidence             99998643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.10  E-value=1.2e-10  Score=108.28  Aligned_cols=90  Identities=31%  Similarity=0.459  Sum_probs=76.9

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      +++...++|...+.||+|+||.||++...++..||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   84 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence            4455567788899999999999999998778899999996543 35678999999999999999999999876 456899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++++|.-
T Consensus        85 v~e~~-~~~~L~~   96 (279)
T 1qpc_A           85 ITEYM-ENGSLVD   96 (279)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEecC-CCCCHHH
Confidence            99999 9998853

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.10  E-value=6.7e-11  Score=110.46  Aligned_cols=92  Identities=32%  Similarity=0.544  Sum_probs=79.1

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCC-CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      ++++...++|...+.||+|+||.||++.... +..||+|.+.... ...+.+.+|+.++++++||||+++++++...+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            4455567788899999999999999999754 7899999996532 3457899999999999999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++++|.-
T Consensus        85 ~~v~e~~-~~~~L~~   98 (288)
T 3kfa_A           85 YIITEFM-TYGNLLD   98 (288)
T ss_dssp             EEEEECC-TTEEHHH
T ss_pred             EEEEEcC-CCCcHHH
Confidence            9999999 9888853

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.10  E-value=3.3e-10  Score=107.29  Aligned_cols=85  Identities=27%  Similarity=0.376  Sum_probs=73.8

Q ss_pred             ccccc-cCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFST-DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~-~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +.|.+ .+.||+|+||.||++.. .+++.||||++........+.+.+|+.++.++ +||||+++++++...+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            34555 47899999999999985 46899999999766556678899999999985 79999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|.
T Consensus        92 ~~-~~~~L~   99 (316)
T 2ac3_A           92 KM-RGGSIL   99 (316)
T ss_dssp             CC-TTCBHH
T ss_pred             cC-CCCcHH
Confidence            99 999885

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.10  E-value=1.9e-10  Score=111.36  Aligned_cols=86  Identities=19%  Similarity=0.326  Sum_probs=75.4

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .++|...+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            356888899999999999999975 68999999996543 2346789999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++|+|+-
T Consensus        98 ~-~~~~L~~  105 (361)
T 3uc3_A           98 A-SGGELYE  105 (361)
T ss_dssp             C-CSCBHHH
T ss_pred             C-CCCCHHH
Confidence            9 9999853

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.10  E-value=2e-10  Score=107.32  Aligned_cols=85  Identities=24%  Similarity=0.355  Sum_probs=75.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.|...+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            45788899999999999999864 58899999986533 34567899999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|.
T Consensus       102 ~-~~~~L~  108 (285)
T 3is5_A          102 C-EGGELL  108 (285)
T ss_dssp             C-SCCBHH
T ss_pred             C-CCCcHH
Confidence            9 998875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.09  E-value=6.5e-11  Score=109.29  Aligned_cols=86  Identities=23%  Similarity=0.371  Sum_probs=74.1

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  419 (437)
                      .++|...+.||+|+||.||++.. ++..+|||.+....  ....+.+.+|+.++++++||||+++++++...  ...++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            45678889999999999999998 58899999997532  23356799999999999999999999999876  678999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        88 ~e~~-~~~~L~~   98 (271)
T 3kmu_A           88 THWM-PYGSLYN   98 (271)
T ss_dssp             EECC-TTCBHHH
T ss_pred             eccc-CCCcHHH
Confidence            9999 9999853

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.09  E-value=1e-10  Score=108.20  Aligned_cols=86  Identities=33%  Similarity=0.541  Sum_probs=70.6

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccC----ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++.. .+..+|||.+....    ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            45688889999999999999998 58899999986532    23357799999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++++|.-
T Consensus        85 ~e~~-~~~~L~~   95 (271)
T 3dtc_A           85 MEFA-RGGPLNR   95 (271)
T ss_dssp             EECC-TTEEHHH
T ss_pred             EEcC-CCCCHHH
Confidence            9999 9988753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.09  E-value=6.6e-11  Score=114.91  Aligned_cols=88  Identities=31%  Similarity=0.525  Sum_probs=74.8

Q ss_pred             hcccccccCccccccceeEEEEEeC------CCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      ..++|...+.||+|+||.||++.+.      .+..||||.++.. .......+.+|+.++.+++||||+++++++.....
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            3467888899999999999999853      3568999999653 33345679999999999999999999999999999


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++|+|.-
T Consensus       149 ~~lv~e~~-~~g~L~~  163 (367)
T 3l9p_A          149 RFILLELM-AGGDLKS  163 (367)
T ss_dssp             CEEEEECC-TTEEHHH
T ss_pred             CEEEEEeC-CCCCHHH
Confidence            99999999 9999853

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.09  E-value=2e-10  Score=107.94  Aligned_cols=86  Identities=26%  Similarity=0.400  Sum_probs=73.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+.|.+.+.||+|+||.||++... ++..+|+|.+........+.+.+|+.++..++||||+++++++...+..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            456888899999999999999975 4889999999776666778899999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++++|.
T Consensus        98 ~-~~~~l~  104 (302)
T 2j7t_A           98 C-PGGAVD  104 (302)
T ss_dssp             C-TTEEHH
T ss_pred             C-CCCcHH
Confidence            9 998875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.09  E-value=2.3e-10  Score=108.72  Aligned_cols=87  Identities=24%  Similarity=0.398  Sum_probs=74.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC--EeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv  419 (437)
                      .+.|.+.+.||+|+||.||++... +++.||||++.... ....+.+.+|+.++++++||||+++++++....  ..+||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            356888899999999999999975 48999999997533 345678899999999999999999999998755  78999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        88 ~e~~-~~~~L~~   98 (319)
T 4euu_A           88 MEFC-PCGSLYT   98 (319)
T ss_dssp             EECC-TTCBHHH
T ss_pred             EeCC-CCCCHHH
Confidence            9999 9998853

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.09  E-value=2.5e-10  Score=107.28  Aligned_cols=88  Identities=23%  Similarity=0.336  Sum_probs=70.3

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--------------------------cCHHHHHHHHHHHh
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--------------------------QGAEEFKNEVVLVA  396 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--------------------------~~~~~~~~E~~~l~  396 (437)
                      .++|...+.||+|+||.||++.. .+++.||||.+.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            35688889999999999999986 4588999999864321                          11356899999999


Q ss_pred             cCCCCCccceEeEEEe--CCEeEEEEecccCCCccccc
Q 013711          397 KLQHRNLVRLLGFCLE--GEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       397 ~l~H~niv~l~g~~~~--~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +++||||+++++++..  .+..++||||+ ++++|.-.
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~-~~~~l~~~  128 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELV-NQGPVMEV  128 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECC-TTCBSCCS
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecC-CCCcHHHH
Confidence            9999999999999987  56899999999 99988654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.09  E-value=9e-11  Score=110.97  Aligned_cols=90  Identities=23%  Similarity=0.412  Sum_probs=76.4

Q ss_pred             HHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      +....++|...+.||+|+||.||++..      .++..||+|.+.... ....+.+.+|+.++++++||||+++++++..
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   97 (314)
T 2ivs_A           18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ   97 (314)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence            344567788899999999999999985      235789999997533 3345679999999999999999999999999


Q ss_pred             CCEeEEEEecccCCCccc
Q 013711          413 GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~  430 (437)
                      .+..++||||+ ++|+|.
T Consensus        98 ~~~~~lv~e~~-~~~~L~  114 (314)
T 2ivs_A           98 DGPLLLIVEYA-KYGSLR  114 (314)
T ss_dssp             SSSCEEEEECC-TTCBHH
T ss_pred             CCceEEEEeec-CCCCHH
Confidence            99999999999 999885

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.08  E-value=1.9e-10  Score=108.47  Aligned_cols=85  Identities=24%  Similarity=0.375  Sum_probs=72.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.|...+.||+|+||.||++... +++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            46788899999999999999864 68999999997654445567899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++++|.
T Consensus        89 -~~~~L~   94 (304)
T 2jam_A           89 -SGGELF   94 (304)
T ss_dssp             -CSCBHH
T ss_pred             -CCccHH
Confidence             999884

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.08  E-value=2.4e-10  Score=107.30  Aligned_cols=87  Identities=23%  Similarity=0.331  Sum_probs=74.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++.. .++..||+|.+.....   ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35688889999999999999985 4688999999854332   2346789999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++++|.-
T Consensus        90 ~e~~-~g~~L~~  100 (294)
T 4eqm_A           90 MEYI-EGPTLSE  100 (294)
T ss_dssp             EECC-CSCBHHH
T ss_pred             EeCC-CCCCHHH
Confidence            9999 9998863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.08  E-value=1.8e-10  Score=109.51  Aligned_cols=87  Identities=20%  Similarity=0.342  Sum_probs=75.6

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +|+.+|+|.++..   .....+.+.+|..++..++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            356788899999999999999864 6899999999643   224567788999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus        85 ~e~~-~gg~L~~   95 (318)
T 1fot_A           85 MDYI-EGGELFS   95 (318)
T ss_dssp             ECCC-CSCBHHH
T ss_pred             EeCC-CCCCHHH
Confidence            9999 9999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.07  E-value=2.1e-10  Score=112.11  Aligned_cols=88  Identities=15%  Similarity=0.188  Sum_probs=76.2

Q ss_pred             hcccccccCccccc--cceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEG--GFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G--~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..++|.+.+.||+|  +||.||++... +++.||||++....  ....+.+.+|+.+++.++|||||++++++...+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34678889999999  99999999975 68999999996532  233467889999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|.-
T Consensus       103 lv~e~~-~~~~L~~  115 (389)
T 3gni_B          103 VVTSFM-AYGSAKD  115 (389)
T ss_dssp             EEEECC-TTCBHHH
T ss_pred             EEEEcc-CCCCHHH
Confidence            999999 9998854

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.07  E-value=3.9e-10  Score=105.54  Aligned_cols=85  Identities=24%  Similarity=0.326  Sum_probs=72.2

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      .+.....||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+ 
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-  101 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV-  101 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC-
Confidence            344456899999999999986 468899999997765556678999999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++++|.-
T Consensus       102 ~~~~L~~  108 (295)
T 2clq_A          102 PGGSLSA  108 (295)
T ss_dssp             SEEEHHH
T ss_pred             CCCCHHH
Confidence            9888753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.07  E-value=9.3e-11  Score=111.13  Aligned_cols=90  Identities=30%  Similarity=0.440  Sum_probs=75.0

Q ss_pred             HHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CC
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GE  414 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~  414 (437)
                      +....++|...+.||+|+||.||++.. .+++.||+|++........+.+.+|+.+++.++||||+++++++..    ..
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH  103 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence            344567799999999999999999986 5689999999876555556789999999999999999999999873    34


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++|+||+ ++|+|.
T Consensus       104 ~~~lv~e~~-~~~~L~  118 (317)
T 2buj_A          104 EAWLLLPFF-KRGTLW  118 (317)
T ss_dssp             EEEEEEECC-TTCBHH
T ss_pred             eeEEEEEeC-CCCcHH
Confidence            789999999 999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.07  E-value=8.3e-11  Score=111.75  Aligned_cols=95  Identities=29%  Similarity=0.487  Sum_probs=79.8

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEe
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLG  408 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g  408 (437)
                      ..++++...++|...+.||+|+||.||++...      .+..||+|.+.... ......+.+|+.++++++||||+++++
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            34556667788999999999999999999853      36789999997533 233457899999999999999999999


Q ss_pred             EEEeCCEeEEEEecccCCCcccc
Q 013711          409 FCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       409 ~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ++...+..++||||+ ++|+|.-
T Consensus        96 ~~~~~~~~~lv~e~~-~~~~L~~  117 (322)
T 1p4o_A           96 VVSQGQPTLVIMELM-TRGDLKS  117 (322)
T ss_dssp             EECSSSSCEEEEECC-TTCBHHH
T ss_pred             EEccCCccEEEEEeC-CCCcHHH
Confidence            999999999999999 9998853

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.07  E-value=1.5e-10  Score=109.58  Aligned_cols=82  Identities=29%  Similarity=0.460  Sum_probs=70.4

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++...+++.||+|++.....  ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            466888899999999999999988899999999965322  224678999999999999999999999999999999999


Q ss_pred             cccCC
Q 013711          422 FTLKN  426 (437)
Q Consensus       422 ~~~~~  426 (437)
                      |+ ++
T Consensus       100 ~~-~~  103 (311)
T 3niz_A          100 FM-EK  103 (311)
T ss_dssp             CC-SE
T ss_pred             CC-CC
Confidence            99 64

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.06  E-value=1.1e-10  Score=111.14  Aligned_cols=87  Identities=20%  Similarity=0.255  Sum_probs=72.3

Q ss_pred             HhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC----Ee
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EK  416 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~  416 (437)
                      ....++|...++||+|+||.||++.. .++.||||++.... .....+.+|+.++.+++||||+++++++....    ..
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ccchhhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            34456788899999999999999998 48899999996533 22345677999999999999999999998743    47


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++||||+ ++|+|.
T Consensus        98 ~lv~e~~-~~g~L~  110 (322)
T 3soc_A           98 WLITAFH-EKGSLS  110 (322)
T ss_dssp             EEEEECC-TTCBHH
T ss_pred             EEEEecC-CCCCHH
Confidence            9999999 999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.06  E-value=1.3e-10  Score=110.43  Aligned_cols=93  Identities=27%  Similarity=0.484  Sum_probs=69.6

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCCC----CEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEE
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSG----QEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL  411 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~----~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  411 (437)
                      +++....++|...+.||+|+||.||++.....    ..||||.++..  .....+.+.+|+.++++++||||+++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            44455667899999999999999999986432    27999999753  2334578999999999999999999999998


Q ss_pred             eCCEe------EEEEecccCCCcccc
Q 013711          412 EGEEK------ILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~------~lv~E~~~~~gsL~l  431 (437)
                      .....      ++|+||+ ++|+|.-
T Consensus        96 ~~~~~~~~~~~~~v~e~~-~~~~L~~  120 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFM-KHGDLHA  120 (323)
T ss_dssp             CC-------CEEEEEECC-TTCBHHH
T ss_pred             ccccccCCCccEEEEEec-cCCcHHH
Confidence            76655      9999999 9998853

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.06  E-value=1.4e-10  Score=111.73  Aligned_cols=84  Identities=23%  Similarity=0.362  Sum_probs=67.7

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+.|...+.||+|+||.||++... +++.||||.++...  ..+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            456888899999999999999975 47899999997532  345688999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + ++|+|+
T Consensus       130 ~-~~~~L~  136 (349)
T 2w4o_A          130 V-TGGELF  136 (349)
T ss_dssp             C-CSCBHH
T ss_pred             C-CCCCHH
Confidence            9 999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.06  E-value=3.8e-10  Score=106.05  Aligned_cols=86  Identities=29%  Similarity=0.458  Sum_probs=71.1

Q ss_pred             ccccccCccccccceeEEEEEe-----CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--CEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--EEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  416 (437)
                      +.|...+.||+|+||.||++.+     .+++.||+|.+... .....+.+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4577889999999999999984     35789999999753 334567899999999999999999999999876  568


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|.-
T Consensus       101 ~lv~e~~-~~~~L~~  114 (302)
T 4e5w_A          101 KLIMEFL-PSGSLKE  114 (302)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             EEEEEeC-CCCcHHH
Confidence            9999999 9998853

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.06  E-value=4.1e-10  Score=104.81  Aligned_cols=85  Identities=24%  Similarity=0.398  Sum_probs=74.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|...+.||+|+||.||++... +++.+|+|.++....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45778899999999999999975 589999999864321      24678999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +||||+ ++++|.
T Consensus        85 lv~e~~-~~~~L~   96 (283)
T 3bhy_A           85 LILELV-SGGELF   96 (283)
T ss_dssp             EEEECC-CSCBHH
T ss_pred             EEEeec-CCCcHH
Confidence            999999 999885

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.06  E-value=2.1e-10  Score=111.89  Aligned_cols=87  Identities=21%  Similarity=0.260  Sum_probs=75.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|.+.+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|+.++..++|||||++++++...+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            356888899999999999999864 5889999998642   234567899999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        94 ~e~~-~gg~L~~  104 (384)
T 4fr4_A           94 VDLL-LGGDLRY  104 (384)
T ss_dssp             ECCC-TTEEHHH
T ss_pred             EecC-CCCcHHH
Confidence            9999 9999854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.06  E-value=1.1e-10  Score=110.18  Aligned_cols=91  Identities=29%  Similarity=0.450  Sum_probs=77.1

Q ss_pred             HHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      ++...++|...+.||+|+||.||++..      .++..||+|.++.... ...+.+.+|+.++.++ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            445567788899999999999999984      2467899999975432 3356799999999999 9999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ..+..++||||+ ++|+|.-
T Consensus        98 ~~~~~~lv~e~~-~~~~L~~  116 (313)
T 1t46_A           98 IGGPTLVITEYC-CYGDLLN  116 (313)
T ss_dssp             SSSSCEEEEECC-TTEEHHH
T ss_pred             cCCCcEEEEecC-CCCCHHH
Confidence            999999999999 9998853

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.05  E-value=2.8e-10  Score=109.88  Aligned_cols=88  Identities=25%  Similarity=0.322  Sum_probs=75.0

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      ..++|...+.||+|+||.||++... +++.||+|+++..   .....+.+.+|..++..+ +||||+++++++...+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            3467888999999999999999864 5899999999643   234456788999999988 7999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|+.
T Consensus       101 lv~E~~-~gg~L~~  113 (353)
T 3txo_A          101 FVMEFV-NGGDLMF  113 (353)
T ss_dssp             EEEECC-CSCBHHH
T ss_pred             EEEeCC-CCCcHHH
Confidence            999999 9999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.05  E-value=3.1e-10  Score=109.39  Aligned_cols=86  Identities=24%  Similarity=0.287  Sum_probs=75.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++..++||||+++++++.+.+..+|||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            56788899999999999999874 6899999998643   2245678899999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++|+|+-
T Consensus       121 e~~-~gg~L~~  130 (350)
T 1rdq_E          121 EYV-AGGEMFS  130 (350)
T ss_dssp             ECC-TTCBHHH
T ss_pred             cCC-CCCcHHH
Confidence            999 9999853

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.05  E-value=1.5e-10  Score=111.16  Aligned_cols=91  Identities=26%  Similarity=0.440  Sum_probs=76.0

Q ss_pred             hHHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      +++...++|...+.||+|+||.||++..      ..+..||+|.+... .....+.+.+|+.++.++ +||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            4556678899999999999999999985      23568999999753 233457899999999999 899999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+..+|||||+ ++|+|.
T Consensus       119 ~~~~~~~lv~e~~-~~g~L~  137 (344)
T 1rjb_A          119 TLSGPIYLIFEYC-CYGDLL  137 (344)
T ss_dssp             CSSSSCEEEEECC-TTCBHH
T ss_pred             eeCCccEEEEecC-CCCcHH
Confidence            9999999999999 999985

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.05  E-value=3e-10  Score=106.18  Aligned_cols=83  Identities=27%  Similarity=0.440  Sum_probs=71.8

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|+||.||++...+++.+|+|.+....  ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            3577789999999999999998779999999986432  23347789999999999999999999999999999999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      + ++ +|
T Consensus        82 ~-~~-~l   86 (288)
T 1ob3_A           82 L-DQ-DL   86 (288)
T ss_dssp             C-SE-EH
T ss_pred             c-CC-CH
Confidence            9 64 54

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.05  E-value=3.5e-10  Score=107.75  Aligned_cols=86  Identities=22%  Similarity=0.337  Sum_probs=74.1

Q ss_pred             cccccccCccccccceeEEEEEe-----CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  416 (437)
                      .++|...+.||+|+||.||++.+     .++..||||++........+.+.+|+.++++++||||+++++++..  ....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            35678889999999999999984     3578999999976655556779999999999999999999999874  5568


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++||||+ ++++|.
T Consensus       102 ~lv~e~~-~~~~L~  114 (327)
T 3lxl_A          102 RLVMEYL-PSGCLR  114 (327)
T ss_dssp             EEEEECC-TTCBHH
T ss_pred             EEEEeec-CCCCHH
Confidence            9999999 999885

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.05  E-value=3.1e-10  Score=114.62  Aligned_cols=85  Identities=27%  Similarity=0.387  Sum_probs=70.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +.|...+.||+|+||.||++... ++..+|+|.+....  ....+.+.+|+.+++.++|||||++++++......++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45778899999999999999974 68899999996532  3345789999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|+
T Consensus       117 ~~-~~g~L~  124 (494)
T 3lij_A          117 CY-KGGELF  124 (494)
T ss_dssp             CC-CSCBHH
T ss_pred             cC-CCCcHH
Confidence            99 999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.04  E-value=1.3e-10  Score=113.53  Aligned_cols=90  Identities=22%  Similarity=0.428  Sum_probs=75.5

Q ss_pred             HhhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      +...++|.+.+.||+|+||.||++...        .+..||||++.... ....+.+.+|++++.++ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            345567888999999999999999852        23579999997543 33446799999999999 999999999999


Q ss_pred             EeCCEeEEEEecccCCCcccc
Q 013711          411 LEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ...+..++||||+ ++|+|.-
T Consensus       145 ~~~~~~~lv~e~~-~~g~L~~  164 (382)
T 3tt0_A          145 TQDGPLYVIVEYA-SKGNLRE  164 (382)
T ss_dssp             CSSSSCEEEEECC-TTCBHHH
T ss_pred             ccCCceEEEEEec-CCCcHHH
Confidence            9999999999999 9999853

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.04  E-value=3e-10  Score=109.29  Aligned_cols=86  Identities=19%  Similarity=0.230  Sum_probs=73.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ++|...+.||+|+||.||++... +++.+|+|++....   ....+.+.+|..++.++ +||||+++++++...+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            56788899999999999999974 58899999997532   22345688999999988 899999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        89 ~e~~-~gg~L~~   99 (345)
T 3a8x_A           89 IEYV-NGGDLMF   99 (345)
T ss_dssp             ECCC-CSCBHHH
T ss_pred             EeCC-CCCcHHH
Confidence            9999 9999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.04  E-value=4.7e-10  Score=113.66  Aligned_cols=86  Identities=28%  Similarity=0.372  Sum_probs=71.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-------------cCHHHHHHHHHHHhcCCCCCccceEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-------------QGAEEFKNEVVLVAKLQHRNLVRLLGF  409 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g~  409 (437)
                      .+.|...++||+|+||.||++... ++..+|+|.+.....             ...+.+.+|+.++++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            356888899999999999999974 578999999864321             235679999999999999999999999


Q ss_pred             EEeCCEeEEEEecccCCCccc
Q 013711          410 CLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       410 ~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +......+|||||+ ++|+|+
T Consensus       115 ~~~~~~~~lv~e~~-~gg~L~  134 (504)
T 3q5i_A          115 FEDKKYFYLVTEFY-EGGELF  134 (504)
T ss_dssp             EECSSEEEEEEECC-TTCBHH
T ss_pred             EEcCCEEEEEEecC-CCCcHH
Confidence            99999999999999 999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.04  E-value=4.4e-10  Score=106.82  Aligned_cols=86  Identities=23%  Similarity=0.357  Sum_probs=75.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.|...+.||+|+||.||++... +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++...+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            56788899999999999999864 589999999865322      23678999999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++++|.-
T Consensus        92 lv~e~~-~~~~L~~  104 (321)
T 2a2a_A           92 LILELV-SGGELFD  104 (321)
T ss_dssp             EEECCC-CSCBHHH
T ss_pred             EEEEcC-CCCcHHH
Confidence            999999 9998853

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.04  E-value=3.5e-10  Score=105.89  Aligned_cols=83  Identities=28%  Similarity=0.458  Sum_probs=71.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|...+.||+|+||.||++... +++.||+|++.....  ...+.+.+|+.++++++||||+++++++..++..+||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            35778899999999999999874 588999999965332  224678999999999999999999999999999999999


Q ss_pred             cccCCCc
Q 013711          422 FTLKNKD  428 (437)
Q Consensus       422 ~~~~~gs  428 (437)
                      |+ +++.
T Consensus        82 ~~-~~~l   87 (292)
T 3o0g_A           82 FC-DQDL   87 (292)
T ss_dssp             CC-SEEH
T ss_pred             cC-CCCH
Confidence            99 6543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.04  E-value=2.8e-10  Score=114.17  Aligned_cols=87  Identities=20%  Similarity=0.365  Sum_probs=75.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|.+.+.||+|+||.||++... +|+.||||++....   ....+.+.+|+.+++.++||||+++++++...+..+||
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            356788899999999999999864 68999999996431   23456799999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus        95 ~E~~-~gg~L~~  105 (476)
T 2y94_A           95 MEYV-SGGELFD  105 (476)
T ss_dssp             EECC-SSEEHHH
T ss_pred             EeCC-CCCcHHH
Confidence            9999 9999853

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.04  E-value=2.6e-10  Score=109.75  Aligned_cols=89  Identities=22%  Similarity=0.303  Sum_probs=75.4

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  416 (437)
                      ...++|...+.||+|+||.||++... +++.||+|+++...   ....+.+..|..++..+ +||||+++++++...+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34567888999999999999999974 58899999996531   34556788999999876 999999999999999999


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|+-
T Consensus        94 ~lv~E~~-~gg~L~~  107 (345)
T 1xjd_A           94 FFVMEYL-NGGDLMY  107 (345)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             EEEEeCC-CCCcHHH
Confidence            9999999 9999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.04  E-value=3.8e-10  Score=104.98  Aligned_cols=86  Identities=29%  Similarity=0.378  Sum_probs=74.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +++.||+|.+....  ......+.+|+..+..+ +||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            356888899999999999999975 68999999987532  23356789999999999 999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++|+|.
T Consensus        90 ~e~~-~~~~L~   99 (289)
T 1x8b_A           90 NEYC-NGGSLA   99 (289)
T ss_dssp             EECC-TTCBHH
T ss_pred             EEec-CCCcHH
Confidence            9999 999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.04  E-value=2.2e-10  Score=110.07  Aligned_cols=86  Identities=19%  Similarity=0.320  Sum_probs=75.3

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccC-----------------HHHHHHHHHHHhcCCCCCccce
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQG-----------------AEEFKNEVVLVAKLQHRNLVRL  406 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l  406 (437)
                      .++|...+.||+|+||.||++.. +++.||+|.+.......                 .+.+.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46788899999999999999999 89999999986432111                 1789999999999999999999


Q ss_pred             EeEEEeCCEeEEEEecccCCCcccc
Q 013711          407 LGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       407 ~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ++++...+..++||||+ ++|+|.-
T Consensus       109 ~~~~~~~~~~~lv~e~~-~~~~L~~  132 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYM-ENDSILK  132 (348)
T ss_dssp             SEEEESSSEEEEEEECC-TTCBSSE
T ss_pred             EEEEeeCCeEEEEEecc-CCCcHHH
Confidence            99999999999999999 9999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.04  E-value=1.7e-10  Score=110.40  Aligned_cols=90  Identities=23%  Similarity=0.447  Sum_probs=75.4

Q ss_pred             HhhcccccccCccccccceeEEEEEeC--------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP--------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      ....++|...+.||+|+||.||++...        ++..||+|++.... ....+.+.+|+.++.++ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            445677888999999999999999862        46789999997543 23456799999999999 899999999999


Q ss_pred             EeCCEeEEEEecccCCCcccc
Q 013711          411 LEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ...+..++||||+ ++|+|.-
T Consensus       111 ~~~~~~~lv~e~~-~~~~L~~  130 (334)
T 2pvf_A          111 TQDGPLYVIVEYA-SKGNLRE  130 (334)
T ss_dssp             CSSSCCEEEEECC-TTCBHHH
T ss_pred             ccCCceEEEEECC-CCCcHHH
Confidence            9999999999999 9998853

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.03  E-value=4.2e-10  Score=104.74  Aligned_cols=86  Identities=26%  Similarity=0.441  Sum_probs=74.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++|...+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            356888899999999999999864 58899999986432  233467889999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|+
T Consensus        85 e~~-~~~~l~   93 (284)
T 3kk8_A           85 DLV-TGGELF   93 (284)
T ss_dssp             CCC-CSCBHH
T ss_pred             ecC-CCCCHH
Confidence            999 998874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.03  E-value=2.5e-10  Score=111.80  Aligned_cols=87  Identities=17%  Similarity=0.220  Sum_probs=73.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|...++||+|+||.||++... +++.+|+|+++...   ....+.+.+|..++.++ +|||||++++++...+..+|
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            456888899999999999999975 57899999997532   22334688999999887 89999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|+.
T Consensus       131 V~E~~-~gg~L~~  142 (396)
T 4dc2_A          131 VIEYV-NGGDLMF  142 (396)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEEcC-CCCcHHH
Confidence            99999 9999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.03  E-value=4.8e-10  Score=112.97  Aligned_cols=85  Identities=32%  Similarity=0.430  Sum_probs=75.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +.|...+.||+|+||.||++... +++.||||++....   ....+.+.+|+.++++++||||+++++++......++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            46788899999999999999874 68999999986432   345678999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ .+|+|+
T Consensus       106 e~~-~~~~L~  114 (484)
T 3nyv_A          106 EVY-TGGELF  114 (484)
T ss_dssp             CCC-CSCBHH
T ss_pred             ecC-CCCCHH
Confidence            999 999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.03  E-value=4e-10  Score=110.52  Aligned_cols=87  Identities=24%  Similarity=0.398  Sum_probs=74.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC--EeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv  419 (437)
                      .+.|.+.+.||+|+||.||++... +++.||||++.... ....+.+.+|+.++++++||||+++++++....  ..+||
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            356888899999999999999975 48999999997533 345678899999999999999999999998755  68999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        88 ~e~~-~~g~L~~   98 (396)
T 4eut_A           88 MEFC-PCGSLYT   98 (396)
T ss_dssp             ECCC-TTEEHHH
T ss_pred             EecC-CCCCHHH
Confidence            9999 9998854

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.03  E-value=2.4e-10  Score=113.78  Aligned_cols=86  Identities=23%  Similarity=0.390  Sum_probs=72.9

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++|...+.||+|+||.||++.. .+|+.+|+|.+....  ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            35688889999999999999985 468899999986533  233467899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|+
T Consensus        90 E~~-~gg~L~   98 (444)
T 3soa_A           90 DLV-TGGELF   98 (444)
T ss_dssp             CCC-BCCBHH
T ss_pred             EeC-CCCCHH
Confidence            999 999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.03  E-value=5.5e-10  Score=103.50  Aligned_cols=86  Identities=22%  Similarity=0.390  Sum_probs=75.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|.+.+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            456888899999999999999975 6899999998643   223456899999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++++|.
T Consensus        90 ~e~~-~~~~L~   99 (276)
T 2h6d_A           90 MEYV-SGGELF   99 (276)
T ss_dssp             EECC-CSCBHH
T ss_pred             Eecc-CCCcHH
Confidence            9999 988875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.03  E-value=5.1e-10  Score=103.64  Aligned_cols=87  Identities=26%  Similarity=0.415  Sum_probs=75.4

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            56788899999999999999874 68999999986533 23356799999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + ++++|.-.
T Consensus        87 ~-~~~~L~~~   95 (276)
T 2yex_A           87 C-SGGELFDR   95 (276)
T ss_dssp             C-TTEEGGGG
T ss_pred             c-CCCcHHHH
Confidence            9 98888544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.03  E-value=3.8e-10  Score=109.05  Aligned_cols=87  Identities=18%  Similarity=0.168  Sum_probs=75.7

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++... ++..||+|++.... ....+.+.+|+.++.+++||||+++++++...+..+||||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            456888899999999999999974 58999999997542 2334679999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|.-
T Consensus       112 ~~-~~~~L~~  120 (360)
T 3eqc_A          112 HM-DGGSLDQ  120 (360)
T ss_dssp             CC-TTCBHHH
T ss_pred             CC-CCCCHHH
Confidence            99 9998853

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.02  E-value=3.6e-10  Score=113.99  Aligned_cols=85  Identities=29%  Similarity=0.416  Sum_probs=75.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      +.|.+.+.||+|+||.||++... +++.||||++...  .....+.+.+|+.++++++||||+++++++......++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            56788899999999999999864 6899999998642  23456789999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++|+|+
T Consensus       102 ~~-~~~~L~  109 (486)
T 3mwu_A          102 LY-TGGELF  109 (486)
T ss_dssp             CC-CSCBHH
T ss_pred             cC-CCCcHH
Confidence            99 999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.02  E-value=5.3e-10  Score=104.72  Aligned_cols=87  Identities=20%  Similarity=0.333  Sum_probs=74.4

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            356788899999999999999975 47899999986532   23346789999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++++|.-
T Consensus        94 ~e~~-~~~~L~~  104 (294)
T 2rku_A           94 LELC-RRRSLLE  104 (294)
T ss_dssp             EECC-TTCBHHH
T ss_pred             EecC-CCCCHHH
Confidence            9999 8888753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.02  E-value=5e-10  Score=106.32  Aligned_cols=85  Identities=31%  Similarity=0.484  Sum_probs=59.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++... +++.||+|.++... ....+.+.+|+.++++++||||+++++++..++..+||||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            356788899999999999999864 58999999996543 2345778999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ + |+|.
T Consensus        84 ~~-~-~~L~   90 (317)
T 2pmi_A           84 FM-D-NDLK   90 (317)
T ss_dssp             CC-C-CBHH
T ss_pred             ec-C-CCHH
Confidence            99 6 4653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.02  E-value=4.9e-10  Score=116.14  Aligned_cols=86  Identities=28%  Similarity=0.482  Sum_probs=70.8

Q ss_pred             cccccccC-ccccccceeEEEEEeC---CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~-~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+++...+ .||+|+||.||+|.+.   ++..||||+++... ....++|.+|+.+|++++|||||++++++.. +..+|
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            34444444 7999999999999863   45679999997643 3456889999999999999999999999876 56899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       413 v~E~~-~~g~L~~  424 (613)
T 2ozo_A          413 VMEMA-GGGPLHK  424 (613)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEEeC-CCCcHHH
Confidence            99999 9999853

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.02  E-value=6.7e-10  Score=104.88  Aligned_cols=85  Identities=25%  Similarity=0.449  Sum_probs=72.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+....   ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            4678889999999999999986 468999999997532   233467899999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus       112 e~~-~~~~L~  120 (310)
T 2wqm_A          112 ELA-DAGDLS  120 (310)
T ss_dssp             ECC-CSCBHH
T ss_pred             ecC-CCCCHH
Confidence            999 988875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.02  E-value=4.7e-10  Score=104.27  Aligned_cols=86  Identities=28%  Similarity=0.451  Sum_probs=74.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... ++..||+|.+...   .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            456888899999999999999864 5779999998542   223456789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++|+|.
T Consensus        88 ~e~~-~~~~l~   97 (279)
T 3fdn_A           88 LEYA-PLGTVY   97 (279)
T ss_dssp             ECCC-TTEEHH
T ss_pred             EecC-CCCcHH
Confidence            9999 988875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.01  E-value=5.9e-10  Score=105.24  Aligned_cols=86  Identities=27%  Similarity=0.395  Sum_probs=73.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+.....  ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            45778899999999999999974 589999999865332  224568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++++|..
T Consensus        83 ~~-~~~~l~~   91 (311)
T 4agu_A           83 YC-DHTVLHE   91 (311)
T ss_dssp             CC-SEEHHHH
T ss_pred             eC-CCchHHH
Confidence            99 8887754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.01  E-value=5.4e-10  Score=103.72  Aligned_cols=86  Identities=27%  Similarity=0.455  Sum_probs=74.6

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35688889999999999999986 468999999986421   23357799999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      +||+ ++++|.
T Consensus        90 ~e~~-~~~~L~   99 (278)
T 3cok_A           90 LEMC-HNGEMN   99 (278)
T ss_dssp             EECC-TTEEHH
T ss_pred             EecC-CCCcHH
Confidence            9999 988875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.01  E-value=2.3e-10  Score=114.06  Aligned_cols=87  Identities=22%  Similarity=0.243  Sum_probs=66.5

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++.. .+++.||||++...   .......+.+|+.++..++||||+++++++...+..+||
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            45688889999999999999986 46899999999642   233446788999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+.
T Consensus       227 ~e~~-~~~~L~~  237 (446)
T 4ejn_A          227 MEYA-NGGELFF  237 (446)
T ss_dssp             ECCC-SSCBHHH
T ss_pred             EeeC-CCCcHHH
Confidence            9999 9999853

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.01  E-value=4.1e-10  Score=115.03  Aligned_cols=86  Identities=29%  Similarity=0.355  Sum_probs=75.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +|+.||+|.+...   .......+.+|+.+|..++|||||++++++.+.+..+||
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            456888899999999999999874 6899999999642   234456789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++|+|.
T Consensus       263 mEy~-~gg~L~  272 (576)
T 2acx_A          263 LTLM-NGGDLK  272 (576)
T ss_dssp             ECCC-CSCBHH
T ss_pred             EEcC-CCCcHH
Confidence            9999 999995

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.01  E-value=4.1e-10  Score=107.27  Aligned_cols=86  Identities=26%  Similarity=0.466  Sum_probs=73.0

Q ss_pred             cccccccCccccccceeEEEEEe-----CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC--Ee
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-----PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE--EK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~  416 (437)
                      .++|...+.||+|+||.||++.+     .+++.||+|.+........+.+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            45677889999999999999984     358899999997765555678999999999999999999999987644  68


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++||||+ ++++|.
T Consensus       120 ~lv~e~~-~~~~L~  132 (326)
T 2w1i_A          120 KLIMEYL-PYGSLR  132 (326)
T ss_dssp             EEEECCC-TTCBHH
T ss_pred             EEEEECC-CCCCHH
Confidence            9999999 999885

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.01  E-value=8.3e-10  Score=103.06  Aligned_cols=86  Identities=29%  Similarity=0.414  Sum_probs=75.7

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .++|.+.+.||+|+||.||++... +++.||+|++...  .....+.+.+|+.++++++||||+++++++......++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            356888999999999999999875 6889999998643  2345678999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++++|.
T Consensus       101 e~~-~~~~L~  109 (287)
T 2wei_A          101 ELY-TGGELF  109 (287)
T ss_dssp             CCC-CSCBHH
T ss_pred             Ecc-CCCCHH
Confidence            999 998874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.00  E-value=5.8e-10  Score=106.71  Aligned_cols=86  Identities=20%  Similarity=0.337  Sum_probs=73.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            45777899999999999999974 47899999986532   233567899999999999999999999999999999999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus       121 e~~-~~~~L~~  130 (335)
T 2owb_A          121 ELC-RRRSLLE  130 (335)
T ss_dssp             CCC-TTCBHHH
T ss_pred             ecC-CCCCHHH
Confidence            999 8888753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.00  E-value=8.2e-10  Score=104.40  Aligned_cols=87  Identities=17%  Similarity=0.251  Sum_probs=74.7

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccC---HHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQG---AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +++.||+|.+.......   .+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            356888999999999999999964 68899999997543222   36789999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      +||+ ++++|.-
T Consensus       113 ~e~~-~~~~L~~  123 (309)
T 2h34_A          113 MRLI-NGVDLAA  123 (309)
T ss_dssp             EECC-CCEEHHH
T ss_pred             EEec-CCCCHHH
Confidence            9999 8888753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.00  E-value=4.7e-10  Score=107.50  Aligned_cols=85  Identities=20%  Similarity=0.382  Sum_probs=72.3

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+...   .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35688889999999999999996 56899999998642   123346789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ . |+|+
T Consensus        88 ~E~~-~-g~l~   96 (336)
T 3h4j_B           88 IEYA-G-GELF   96 (336)
T ss_dssp             ECCC-C-EEHH
T ss_pred             EECC-C-CcHH
Confidence            9999 4 5553

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.00  E-value=1e-09  Score=103.17  Aligned_cols=86  Identities=20%  Similarity=0.407  Sum_probs=75.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++......++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            4577889999999999999986 468899999996543 34567899999999999999999999999999999999999


Q ss_pred             ccCCCcccc
Q 013711          423 TLKNKDNWI  431 (437)
Q Consensus       423 ~~~~gsL~l  431 (437)
                      + ++++|.-
T Consensus       102 ~-~~~~L~~  109 (303)
T 3a7i_A          102 L-GGGSALD  109 (303)
T ss_dssp             C-TTEEHHH
T ss_pred             C-CCCcHHH
Confidence            9 8888753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.99  E-value=4.4e-10  Score=108.29  Aligned_cols=83  Identities=27%  Similarity=0.419  Sum_probs=70.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      +.|...+.||+|+||.||++.. .+++.||||.+.....   ...+.+.+|+.++++++||||+++++++...+..+|||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            3477788999999999999985 5689999999965322   22457899999999999999999999999999999999


Q ss_pred             ecccCCCcc
Q 013711          421 EFTLKNKDN  429 (437)
Q Consensus       421 E~~~~~gsL  429 (437)
                      ||+ + |+|
T Consensus       134 e~~-~-g~l  140 (348)
T 1u5q_A          134 EYC-L-GSA  140 (348)
T ss_dssp             ECC-S-EEH
T ss_pred             ecC-C-CCH
Confidence            999 6 444

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.99  E-value=1.1e-09  Score=104.42  Aligned_cols=78  Identities=29%  Similarity=0.357  Sum_probs=68.7

Q ss_pred             cCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEecccCCC
Q 013711          350 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFTLKNK  427 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~~~~g  427 (437)
                      .+.||+|+||.||++... +++.||||++...   ....+.+|+.++..+. ||||+++++++.+....+|||||+ ++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~-~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL-NGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-CSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc-CCC
Confidence            478999999999999874 5899999998643   3467889999999996 999999999999999999999999 999


Q ss_pred             cccc
Q 013711          428 DNWI  431 (437)
Q Consensus       428 sL~l  431 (437)
                      +|+-
T Consensus        92 ~L~~   95 (325)
T 3kn6_A           92 ELFE   95 (325)
T ss_dssp             BHHH
T ss_pred             cHHH
Confidence            9853

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.99  E-value=8.6e-10  Score=104.70  Aligned_cols=86  Identities=26%  Similarity=0.363  Sum_probs=72.1

Q ss_pred             cccccCccccccceeEEEEEeC-----CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-----SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  417 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  417 (437)
                      .|...+.||+|+||.||++.+.     +++.||||++.... ....+.+.+|+.++++++||||+++++++..  ....+
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            3578899999999999998752     57899999997543 2335679999999999999999999999988  46789


Q ss_pred             EEEecccCCCccccc
Q 013711          418 LVYEFTLKNKDNWIG  432 (437)
Q Consensus       418 lv~E~~~~~gsL~l~  432 (437)
                      +||||+ ++|+|.-.
T Consensus       112 lv~e~~-~~~~L~~~  125 (318)
T 3lxp_A          112 LVMEYV-PLGSLRDY  125 (318)
T ss_dssp             EEECCC-TTCBHHHH
T ss_pred             EEEecc-cCCcHHHH
Confidence            999999 99988643

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.99  E-value=6.8e-10  Score=107.13  Aligned_cols=88  Identities=23%  Similarity=0.189  Sum_probs=75.4

Q ss_pred             hcccccccCccccccceeEEEEEeCC-CCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~-~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      ..++|...+.||+|+||.||++.... ++.||+|+++..   .....+.+.+|..++..+ +||||+++++++...+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34678889999999999999999754 789999999653   234567789999999988 8999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|+-
T Consensus        98 lv~E~~-~gg~L~~  110 (353)
T 2i0e_A           98 FVMEYV-NGGDLMY  110 (353)
T ss_dssp             EEEECC-CSCBHHH
T ss_pred             EEEeCC-CCCcHHH
Confidence            999999 9999863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.99  E-value=3.6e-10  Score=107.68  Aligned_cols=88  Identities=33%  Similarity=0.571  Sum_probs=72.4

Q ss_pred             hhcccccccCccccccceeEEEEEe------CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      ...++|...+.||+|+||.||++..      .++..||||.+... .......+.+|+.++.+++||||+++++++...+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            3456788899999999999999984      24678999999643 2334567999999999999999999999999999


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++||||+ ++|+|.
T Consensus       107 ~~~lv~e~~-~~~~L~  121 (327)
T 2yfx_A          107 PRFILMELM-AGGDLK  121 (327)
T ss_dssp             SCEEEEECC-TTEEHH
T ss_pred             CcEEEEecC-CCCcHH
Confidence            999999999 999885

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.99  E-value=3.5e-10  Score=107.00  Aligned_cols=87  Identities=21%  Similarity=0.236  Sum_probs=72.2

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccC---HHHHHHHHHHHhcCCCCCccceEeEEEeCC----E
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQG---AEEFKNEVVLVAKLQHRNLVRLLGFCLEGE----E  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~  415 (437)
                      .++|.+.+.||+|+||.||++.. .+++.||||+++......   .+.+.+|+.++.+++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            35688889999999999999985 568899999997543222   357899999999999999999999987644    3


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++|+|.-
T Consensus        91 ~~lv~e~~-~g~~L~~  105 (311)
T 3ork_A           91 PYIVMEYV-DGVTLRD  105 (311)
T ss_dssp             EEEEEECC-CEEEHHH
T ss_pred             cEEEEecC-CCCCHHH
Confidence            49999999 9988853

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.98  E-value=2.8e-10  Score=107.51  Aligned_cols=82  Identities=24%  Similarity=0.503  Sum_probs=70.0

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .++|...+.||+|+||.||++.. .++.||+|.+...  ...+.|.+|+.++++++||||+++++++.  +..++||||+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            34677889999999999999998 5788999998643  33567999999999999999999999876  4589999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++|+|.-
T Consensus        82 -~~~~L~~   88 (307)
T 2eva_A           82 -EGGSLYN   88 (307)
T ss_dssp             -TTCBHHH
T ss_pred             -CCCCHHH
Confidence             9999854

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.98  E-value=5.1e-10  Score=104.51  Aligned_cols=86  Identities=28%  Similarity=0.497  Sum_probs=70.6

Q ss_pred             cccccccC-ccccccceeEEEEEeC---CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~-~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+++...+ .||+|+||.||++...   ++..||+|.++... ....+.+.+|+.++.+++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            34455555 8999999999999853   57789999997643 23456799999999999999999999998 5567899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++++|.-
T Consensus        87 v~e~~-~~~~L~~   98 (287)
T 1u59_A           87 VMEMA-GGGPLHK   98 (287)
T ss_dssp             EEECC-TTEEHHH
T ss_pred             EEEeC-CCCCHHH
Confidence            99999 9888853

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.98  E-value=3.7e-10  Score=106.81  Aligned_cols=98  Identities=32%  Similarity=0.523  Sum_probs=74.2

Q ss_pred             cccchhhHHhhcccccccCccccccceeEEEEEeC----CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccce
Q 013711          333 LQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRL  406 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l  406 (437)
                      .....+++....++|...+.||+|+||.||++...    .+..||+|.++...  ....+.+.+|+.++++++||||+++
T Consensus        22 l~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~  101 (313)
T 3brb_A           22 LQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL  101 (313)
T ss_dssp             --CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             hhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeee
Confidence            34455666677788999999999999999999863    24589999986532  2334679999999999999999999


Q ss_pred             EeEEEeCCE-----eEEEEecccCCCcccc
Q 013711          407 LGFCLEGEE-----KILVYEFTLKNKDNWI  431 (437)
Q Consensus       407 ~g~~~~~~~-----~~lv~E~~~~~gsL~l  431 (437)
                      ++++...+.     .++|+||+ ++|+|.-
T Consensus       102 ~~~~~~~~~~~~~~~~~v~e~~-~~~~L~~  130 (313)
T 3brb_A          102 LGVCIEMSSQGIPKPMVILPFM-KYGDLHT  130 (313)
T ss_dssp             CEEEEC-------CEEEEEECC-TTCBHHH
T ss_pred             eEEEeeccccCCcccEEEEecc-cCCCHHH
Confidence            999987543     59999999 9998853

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.98  E-value=7.6e-10  Score=109.36  Aligned_cols=87  Identities=21%  Similarity=0.376  Sum_probs=70.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--------ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--------GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      .++|...+.||+|+||.||++... +++.||||++....        ......+.+|+.+|++++||||+++++++. .+
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            467888999999999999999864 57899999986421        111235889999999999999999999875 56


Q ss_pred             EeEEEEecccCCCccccc
Q 013711          415 EKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l~  432 (437)
                      ..++||||+ ++|+|+-.
T Consensus       213 ~~~lv~e~~-~~g~L~~~  229 (419)
T 3i6u_A          213 DYYIVLELM-EGGELFDK  229 (419)
T ss_dssp             EEEEEEECC-TTCBGGGG
T ss_pred             ceEEEEEcC-CCCcHHHH
Confidence            689999999 99998643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.98  E-value=4.4e-10  Score=106.30  Aligned_cols=97  Identities=24%  Similarity=0.420  Sum_probs=79.4

Q ss_pred             ccchhhHHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccc
Q 013711          334 QFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVR  405 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~  405 (437)
                      .+....+....++|...+.||+|+||.||++..      .+++.||||.+..... ...+.+.+|+.++.++ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            345566677778899999999999999999974      2467899999975432 3345789999999999 7999999


Q ss_pred             eEeEEEeCC-EeEEEEecccCCCcccc
Q 013711          406 LLGFCLEGE-EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       406 l~g~~~~~~-~~~lv~E~~~~~gsL~l  431 (437)
                      +++++...+ ..++||||+ ++|+|.-
T Consensus        96 ~~~~~~~~~~~~~lv~e~~-~~~~L~~  121 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFC-KFGNLST  121 (316)
T ss_dssp             EEEEECCTTSCCEEEEECC-TTEEHHH
T ss_pred             EEEEEecCCCceEEEEEcC-CCCcHHH
Confidence            999987754 589999999 9988853

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.97  E-value=8.1e-10  Score=103.05  Aligned_cols=84  Identities=32%  Similarity=0.558  Sum_probs=70.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc-------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ-------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+......       ..+.+.+|+.++.+++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            45678889999999999999987 46899999998653321       1267899999999999999999999886554 


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                       ++||||+ ++|+|+
T Consensus        97 -~lv~e~~-~~~~L~  109 (287)
T 4f0f_A           97 -RMVMEFV-PCGDLY  109 (287)
T ss_dssp             -EEEEECC-TTCBHH
T ss_pred             -eEEEEec-CCCCHH
Confidence             7999999 999984

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.97  E-value=3.3e-10  Score=106.39  Aligned_cols=89  Identities=17%  Similarity=0.304  Sum_probs=61.1

Q ss_pred             HhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ....++|...+.||+|+||.||++.. .+++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            44567788999999999999999986 468899999986532 3345678999999999999999999999999999999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++++|.
T Consensus        91 v~e~~-~~~~L~  101 (303)
T 2vwi_A           91 VMKLL-SGGSVL  101 (303)
T ss_dssp             EEECC-TTCBHH
T ss_pred             Eehhc-cCCchH
Confidence            99999 999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.97  E-value=4.9e-10  Score=104.28  Aligned_cols=89  Identities=21%  Similarity=0.411  Sum_probs=72.5

Q ss_pred             HhhcccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      +...++|...+.||+|+||.||++....    +..||+|.+.... ....+.+.+|+.++++++||||+++++++ ..+.
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~   89 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP   89 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSS
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCc
Confidence            3445678889999999999999998632    4579999987533 23356799999999999999999999987 4567


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++|+|.-
T Consensus        90 ~~lv~e~~-~~~~L~~  104 (281)
T 1mp8_A           90 VWIIMELC-TLGELRS  104 (281)
T ss_dssp             CEEEEECC-TTEEHHH
T ss_pred             cEEEEecC-CCCCHHH
Confidence            89999999 9888753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.97  E-value=8.4e-10  Score=102.81  Aligned_cols=86  Identities=23%  Similarity=0.434  Sum_probs=74.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... ++..||+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            356788899999999999999875 5788999998542   223456799999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ ++|+|.
T Consensus        93 ~e~~-~~~~L~  102 (284)
T 2vgo_A           93 LEFA-PRGELY  102 (284)
T ss_dssp             ECCC-TTEEHH
T ss_pred             EEeC-CCCcHH
Confidence            9999 988885

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.97  E-value=1.2e-09  Score=103.19  Aligned_cols=85  Identities=24%  Similarity=0.443  Sum_probs=69.6

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ..+.|...+.||+|+||.||++... +|+.||+|.+...  ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            3466888899999999999999875 4899999998653  245789999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ ++++|.
T Consensus       105 ~~-~~~~L~  112 (314)
T 3com_A          105 YC-GAGSVS  112 (314)
T ss_dssp             CC-TTEEHH
T ss_pred             cC-CCCCHH
Confidence            99 888875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.97  E-value=1e-09  Score=104.73  Aligned_cols=86  Identities=28%  Similarity=0.408  Sum_probs=73.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+.....  ...+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            46788899999999999999974 489999999865332  224568899999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++++|..
T Consensus       105 ~~-~~~~l~~  113 (331)
T 4aaa_A          105 FV-DHTILDD  113 (331)
T ss_dssp             CC-SEEHHHH
T ss_pred             cC-CcchHHH
Confidence            99 8877654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.96  E-value=7.4e-10  Score=107.06  Aligned_cols=93  Identities=19%  Similarity=0.319  Sum_probs=76.2

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCcc-----------CHHHHHHHHHHHhcCCCCCcc
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ-----------GAEEFKNEVVLVAKLQHRNLV  404 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv  404 (437)
                      ...++....++|...+.||+|+||.||++...++..||||++......           ..+.+.+|+.++.+++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            445677778899999999999999999999878999999998542211           126799999999999999999


Q ss_pred             ceEeEEEeC-----CEeEEEEecccCCCccc
Q 013711          405 RLLGFCLEG-----EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       405 ~l~g~~~~~-----~~~~lv~E~~~~~gsL~  430 (437)
                      ++++++...     ...++||||+ + |+|.
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~-~-~~l~  121 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELM-R-TDLA  121 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECC-S-EEHH
T ss_pred             ceeeeEEeccCCCcceEEEEEccC-C-CCHH
Confidence            999998653     3589999999 6 4443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.96  E-value=8.8e-10  Score=112.07  Aligned_cols=86  Identities=28%  Similarity=0.341  Sum_probs=75.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      .++|...+.||+|+||.||++... +|+.||+|++...   .....+.+.+|+.++.+++||||+++++++......+||
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            356778889999999999999974 5899999999642   224457789999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ +||+|.
T Consensus       264 mE~~-~gg~L~  273 (543)
T 3c4z_A          264 MTIM-NGGDIR  273 (543)
T ss_dssp             ECCC-TTCBHH
T ss_pred             EEec-cCCCHH
Confidence            9999 999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.96  E-value=1.1e-09  Score=101.57  Aligned_cols=86  Identities=22%  Similarity=0.328  Sum_probs=72.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l  418 (437)
                      .++|...+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+.++++++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            356788899999999999999874 68999999996532  2335679999999999999999999998865  567999


Q ss_pred             EEecccCCCccc
Q 013711          419 VYEFTLKNKDNW  430 (437)
Q Consensus       419 v~E~~~~~gsL~  430 (437)
                      ||||+ ++++|.
T Consensus        85 v~e~~-~~~~L~   95 (279)
T 2w5a_A           85 VMEYC-EGGDLA   95 (279)
T ss_dssp             EEECC-TTEEHH
T ss_pred             EEeCC-CCCCHH
Confidence            99999 988875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.96  E-value=5.6e-10  Score=103.67  Aligned_cols=85  Identities=28%  Similarity=0.470  Sum_probs=71.5

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-CEeEEEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-EEKILVY  420 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~  420 (437)
                      ...++|...+.||+|+||.||++.. .++.||+|.++..  ...+.+.+|+.++.+++||||+++++++... +..++||
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             CChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            3456788899999999999999988 5889999998653  3457899999999999999999999987654 4689999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus        95 e~~-~~~~L~  103 (278)
T 1byg_A           95 EYM-AKGSLV  103 (278)
T ss_dssp             CCC-TTEEHH
T ss_pred             ecC-CCCCHH
Confidence            999 988875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.96  E-value=6.3e-10  Score=108.18  Aligned_cols=86  Identities=20%  Similarity=0.252  Sum_probs=64.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC---ccCHHHHHHHHHH-HhcCCCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS---GQGAEEFKNEVVL-VAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ++|...+.||+|+||.||++... +++.+|+|+++...   ....+.+.+|..+ ++.++||||+++++++...+..+||
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            46788899999999999999974 57899999996532   2234556777776 5678999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus       118 ~E~~-~gg~L~~  128 (373)
T 2r5t_A          118 LDYI-NGGELFY  128 (373)
T ss_dssp             EECC-CSCBHHH
T ss_pred             EeCC-CCCcHHH
Confidence            9999 9999853

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.96  E-value=5.6e-10  Score=106.78  Aligned_cols=87  Identities=25%  Similarity=0.441  Sum_probs=72.4

Q ss_pred             cccccccCccccccceeEEEEEeCC-----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+.|...+.||+|+||.||++....     +..||+|.++... ......+.+|+.++.+++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3556778899999999999998632     2369999997543 233457999999999999999999999999989999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|.-
T Consensus       123 lv~e~~-~~~~L~~  135 (333)
T 1mqb_A          123 IITEYM-ENGALDK  135 (333)
T ss_dssp             EEEECC-TTEEHHH
T ss_pred             EEEeCC-CCCcHHH
Confidence            999999 9988853

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.96  E-value=1.1e-09  Score=102.27  Aligned_cols=85  Identities=27%  Similarity=0.355  Sum_probs=71.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  417 (437)
                      ..|...+.||+|+||.||++... ++..||+|.+...  .....+.+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            44677789999999999999864 5789999998643  23345679999999999999999999999875    35689


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      +||||+ ++|+|.
T Consensus       106 lv~e~~-~~~~L~  117 (290)
T 1t4h_A          106 LVTELM-TSGTLK  117 (290)
T ss_dssp             EEEECC-CSCBHH
T ss_pred             EEEEec-CCCCHH
Confidence            999999 999885

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.95  E-value=1e-09  Score=102.85  Aligned_cols=87  Identities=22%  Similarity=0.281  Sum_probs=73.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---------cCHHHHHHHHHHHhcCC-CCCccceEeEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---------QGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLE  412 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~  412 (437)
                      .++|...+.||+|+||.||++... +++.||||.++....         ...+.+.+|+.++.+++ ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            356888899999999999999874 588999999864321         12356889999999995 9999999999999


Q ss_pred             CCEeEEEEecccCCCcccc
Q 013711          413 GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l  431 (437)
                      ....++||||+ ++++|.-
T Consensus        96 ~~~~~lv~e~~-~~~~L~~  113 (298)
T 1phk_A           96 NTFFFLVFDLM-KKGELFD  113 (298)
T ss_dssp             SSEEEEEEECC-TTCBHHH
T ss_pred             CCeEEEEEecc-CCCcHHH
Confidence            99999999999 9888753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.95  E-value=5.8e-10  Score=108.04  Aligned_cols=89  Identities=20%  Similarity=0.269  Sum_probs=74.9

Q ss_pred             hHHhhcccccccCccccccceeEEEEE------eCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC---CCCccceEeE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ---HRNLVRLLGF  409 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~------~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~  409 (437)
                      +++...+.|...+.||+|+||.||++.      ...++.||+|++...   ..+++..|+.++..++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            444556778889999999999999994      346889999998653   4567888888888886   9999999999


Q ss_pred             EEeCCEeEEEEecccCCCcccc
Q 013711          410 CLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       410 ~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      +...+..+|||||+ ++|+|.-
T Consensus       136 ~~~~~~~~lv~e~~-~~g~L~~  156 (365)
T 3e7e_A          136 HLFQNGSVLVGELY-SYGTLLN  156 (365)
T ss_dssp             EECSSCEEEEECCC-CSCBHHH
T ss_pred             eecCCCcEEEEecc-CCCcHHH
Confidence            99999999999999 9999863

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.95  E-value=1.1e-09  Score=102.52  Aligned_cols=88  Identities=27%  Similarity=0.442  Sum_probs=70.0

Q ss_pred             hhcccccccC-ccccccceeEEEEEe---CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          342 VATNKFSTDN-KLGEGGFGEVYKGVL---PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       342 ~~~~~~~~~~-~lG~G~fg~Vy~g~~---~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      ...+.|.+.+ .||+|+||.||++.+   ..+..||||.++....  ...+.+.+|+.++..++||||+++++++ ..+.
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~   91 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES   91 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence            3445667666 899999999999964   2467899999975432  2256799999999999999999999998 5677


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++++|.-
T Consensus        92 ~~lv~e~~-~~~~L~~  106 (291)
T 1xbb_A           92 WMLVMEMA-ELGPLNK  106 (291)
T ss_dssp             EEEEEECC-TTEEHHH
T ss_pred             cEEEEEeC-CCCCHHH
Confidence            89999999 9888753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.95  E-value=1e-09  Score=104.34  Aligned_cols=93  Identities=28%  Similarity=0.468  Sum_probs=77.5

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEe-
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE-  412 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-  412 (437)
                      +..++....+.|...+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.++.++ +||||+++++++.. 
T Consensus        15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   93 (326)
T 2x7f_A           15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK   93 (326)
T ss_dssp             -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred             cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence            3444555677889999999999999999997 468999999986533 3457899999999998 89999999999987 


Q ss_pred             -----CCEeEEEEecccCCCccc
Q 013711          413 -----GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 -----~~~~~lv~E~~~~~gsL~  430 (437)
                           .+..++||||+ ++|+|.
T Consensus        94 ~~~~~~~~~~lv~e~~-~~~~L~  115 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFC-GAGSVT  115 (326)
T ss_dssp             C--CCCCEEEEEEECC-TTEEHH
T ss_pred             cCccccceEEEEEEcC-CCCcHH
Confidence                 46799999999 888875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.95  E-value=1.1e-09  Score=104.49  Aligned_cols=86  Identities=29%  Similarity=0.490  Sum_probs=70.2

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ..++|...+.||+|+||.||++.. .+++.||||+++....  ...+.+.+|+.++++++||||+++++++...+..+||
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            345788899999999999999985 4688999999965332  2345688999999999999999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ + |+|.
T Consensus       112 ~e~~-~-~~L~  120 (329)
T 3gbz_A          112 FEYA-E-NDLK  120 (329)
T ss_dssp             EECC-S-EEHH
T ss_pred             EecC-C-CCHH
Confidence            9999 6 4654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.94  E-value=1e-09  Score=105.36  Aligned_cols=83  Identities=20%  Similarity=0.339  Sum_probs=70.6

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++... +++.+|+|++.....    ...+|++++.++ +||||+++++++.+++..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            356888899999999999999874 588999999975432    235688888887 79999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ ++|+|+-
T Consensus        97 ~~-~gg~L~~  105 (342)
T 2qr7_A           97 LM-KGGELLD  105 (342)
T ss_dssp             CC-CSCBHHH
T ss_pred             CC-CCCcHHH
Confidence            99 9999853

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.94  E-value=1.6e-09  Score=101.68  Aligned_cols=84  Identities=20%  Similarity=0.371  Sum_probs=68.6

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhc--CCCCCccceEeEEEeC----CEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK--LQHRNLVRLLGFCLEG----EEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~  417 (437)
                      .++|...+.||+|+||.||++.. +++.||||++...   ..+.+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            45788899999999999999998 7899999998643   34556677777666  7999999999987653    4589


Q ss_pred             EEEecccCCCccccc
Q 013711          418 LVYEFTLKNKDNWIG  432 (437)
Q Consensus       418 lv~E~~~~~gsL~l~  432 (437)
                      +||||+ ++|+|.-.
T Consensus        83 lv~e~~-~~g~L~~~   96 (301)
T 3q4u_A           83 LITHYH-EMGSLYDY   96 (301)
T ss_dssp             EEECCC-TTCBHHHH
T ss_pred             Eehhhc-cCCCHHHH
Confidence            999999 99998643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.94  E-value=1.1e-09  Score=102.64  Aligned_cols=85  Identities=26%  Similarity=0.392  Sum_probs=71.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe-----------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-----------  412 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----------  412 (437)
                      ++|...+.||+|+||.||++.. .+++.||+|.+... ....+.+.+|+.++.+++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            4678889999999999999996 46899999998642 2345678999999999999999999998865           


Q ss_pred             --CCEeEEEEecccCCCcccc
Q 013711          413 --GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 --~~~~~lv~E~~~~~gsL~l  431 (437)
                        ....++||||+ ++|+|.-
T Consensus        85 ~~~~~~~lv~e~~-~~~~L~~  104 (303)
T 1zy4_A           85 KKKSTLFIQMEYC-ENGTLYD  104 (303)
T ss_dssp             -CEEEEEEEEECC-CSCBHHH
T ss_pred             ccCCceEEEEecC-CCCCHHH
Confidence              35689999999 9988853

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.93  E-value=1.4e-09  Score=103.57  Aligned_cols=87  Identities=29%  Similarity=0.490  Sum_probs=71.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCE--EEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQE--IAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~--vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|...+.||+|+||.||++... ++..  +++|.+... .....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            356788899999999999999864 4554  499998653 233456799999999999 99999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       104 v~e~~-~~~~L~~  115 (327)
T 1fvr_A          104 AIEYA-PHGNLLD  115 (327)
T ss_dssp             EECCC-TTCBHHH
T ss_pred             EEecC-CCCCHHH
Confidence            99999 9998853

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.93  E-value=1e-09  Score=104.24  Aligned_cols=84  Identities=21%  Similarity=0.370  Sum_probs=68.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc--------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG--------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  415 (437)
                      ++|.+.+.||+|+||.||++... +++.||||.+.....        .....+.+|+.++++++||||+++++++..++ 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            56888899999999999999864 578999999864321        12345889999999999999999999987654 


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++||||+ ++|+|.
T Consensus        89 ~~lv~e~~-~~~~L~  102 (322)
T 2ycf_A           89 YYIVLELM-EGGELF  102 (322)
T ss_dssp             EEEEEECC-TTEETH
T ss_pred             eEEEEecC-CCCcHH
Confidence            89999999 999885

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.93  E-value=1e-09  Score=103.84  Aligned_cols=84  Identities=30%  Similarity=0.261  Sum_probs=67.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...++||+|+||.||++... +++.||||++....  ......+..|+..+.++ +||||+++++++.+++..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            56888899999999999999975 68999999986432  22234556666666555 8999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ . ++|.
T Consensus       137 e~~-~-~~L~  144 (311)
T 3p1a_A          137 ELC-G-PSLQ  144 (311)
T ss_dssp             ECC-C-CBHH
T ss_pred             ecc-C-CCHH
Confidence            999 4 4553

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.92  E-value=2.7e-09  Score=101.73  Aligned_cols=93  Identities=23%  Similarity=0.298  Sum_probs=75.9

Q ss_pred             hHHhhccccccc-CccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeC
Q 013711          339 TIEVATNKFSTD-NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEG  413 (437)
Q Consensus       339 ~~~~~~~~~~~~-~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  413 (437)
                      ..+.-.+.|... +.||+|+||.||++... +++.||+|.+...  .......+.+|+.++..+ +||||+++++++...
T Consensus        22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            333334445555 78999999999999864 5899999998653  234567899999999999 579999999999999


Q ss_pred             CEeEEEEecccCCCccccc
Q 013711          414 EEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l~  432 (437)
                      +..++||||+ ++|+|.-.
T Consensus       102 ~~~~lv~e~~-~~~~L~~~  119 (327)
T 3lm5_A          102 SEIILILEYA-AGGEIFSL  119 (327)
T ss_dssp             SEEEEEEECC-TTEEGGGG
T ss_pred             CeEEEEEEec-CCCcHHHH
Confidence            9999999999 99988654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.92  E-value=2.3e-09  Score=103.89  Aligned_cols=88  Identities=18%  Similarity=0.299  Sum_probs=74.4

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc--------CHHHHHHHHHHHhcC-CCCCccceEeEEEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ--------GAEEFKNEVVLVAKL-QHRNLVRLLGFCLE  412 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  412 (437)
                      ..++|...+.||+|+||.||++... +|+.||||++......        ..+.+.+|+.++.++ +||||+++++++..
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            3456888899999999999999975 6899999998653311        134678999999999 89999999999999


Q ss_pred             CCEeEEEEecccCCCcccc
Q 013711          413 GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 ~~~~~lv~E~~~~~gsL~l  431 (437)
                      ....+|||||+ ++++|.-
T Consensus       172 ~~~~~lv~e~~-~g~~L~~  189 (365)
T 2y7j_A          172 SSFMFLVFDLM-RKGELFD  189 (365)
T ss_dssp             SSEEEEEECCC-TTCBHHH
T ss_pred             CCEEEEEEEeC-CCCcHHH
Confidence            99999999999 9988753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.92  E-value=1.4e-09  Score=102.87  Aligned_cols=84  Identities=23%  Similarity=0.372  Sum_probs=66.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEE------------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL------------  411 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~------------  411 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+........+.+.+|+.++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56788899999999999999975 48899999997665555678999999999999999999998873            


Q ss_pred             --eCCEeEEEEecccCCCccc
Q 013711          412 --EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 --~~~~~~lv~E~~~~~gsL~  430 (437)
                        .....++||||+ + |+|.
T Consensus        91 ~~~~~~~~lv~e~~-~-~~L~  109 (320)
T 2i6l_A           91 LTELNSVYIVQEYM-E-TDLA  109 (320)
T ss_dssp             CCSCSEEEEEEECC-S-EEHH
T ss_pred             ccccCceeEEeecc-C-CCHH
Confidence              346789999999 6 5654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.92  E-value=1.3e-09  Score=104.37  Aligned_cols=85  Identities=24%  Similarity=0.398  Sum_probs=69.2

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccC--------ccCHHHHHHHHHHHhcCC---------CCCccce
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--------GQGAEEFKNEVVLVAKLQ---------HRNLVRL  406 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l  406 (437)
                      .++|...+.||+|+||.||++.. +|+.||||++....        ....+.+.+|+.++++++         |||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            45678889999999999999998 78999999997532        233478899999998885         8888888


Q ss_pred             EeEEE------------------------------eCCEeEEEEecccCCCccc
Q 013711          407 LGFCL------------------------------EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       407 ~g~~~------------------------------~~~~~~lv~E~~~~~gsL~  430 (437)
                      .+.+.                              ..+..+|||||+ ++|+++
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~-~~g~ll  150 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE-FGGIDL  150 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE-CCCEET
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec-CCCccH
Confidence            88754                              267899999999 888654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.92  E-value=2.1e-09  Score=102.40  Aligned_cols=86  Identities=30%  Similarity=0.507  Sum_probs=66.8

Q ss_pred             cccccccCccccccceeEEEEEeC-CCC----EEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .++|...+.||+|+||.||++... +++    .||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            356788899999999999999863 343    4688888643 3355678999999999999999999999998754 78


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +|+||+ ++|+|.-
T Consensus        93 ~v~e~~-~~g~L~~  105 (327)
T 3poz_A           93 LITQLM-PFGCLLD  105 (327)
T ss_dssp             EEEECC-TTCBHHH
T ss_pred             EEEEec-CCCcHHH
Confidence            999999 9998863

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.91  E-value=2.6e-09  Score=100.16  Aligned_cols=84  Identities=30%  Similarity=0.486  Sum_probs=69.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            46778899999999999999874 68999999986532  2334678999999999999999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+ + ++|.
T Consensus        83 ~~-~-~~L~   89 (299)
T 2r3i_A           83 FL-H-QDLK   89 (299)
T ss_dssp             CC-S-EEHH
T ss_pred             cc-c-CCHH
Confidence            99 5 5653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.91  E-value=9.1e-10  Score=102.95  Aligned_cols=88  Identities=27%  Similarity=0.524  Sum_probs=71.9

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+...++|...+.||+|+||.||++...  ..+|+|.++...  ....+.|.+|+.++++++||||++++++. ..+..+
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~   95 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA   95 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence            3455677888999999999999999863  359999986533  23356799999999999999999999965 456689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ ++++|.-
T Consensus        96 lv~e~~-~~~~L~~  108 (289)
T 3og7_A           96 IVTQWC-EGSSLYH  108 (289)
T ss_dssp             EEEECC-CEEEHHH
T ss_pred             EEEEec-CCCcHHH
Confidence            999999 9998853

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.91  E-value=7.7e-10  Score=106.83  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=74.0

Q ss_pred             cccccccCccccccceeEEEEEe----CCCCEEEEEEccccC----ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCC
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGE  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  414 (437)
                      .++|...+.||+|+||.||++..    .+++.||||+++...    ....+.+.+|+.++.++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            35688889999999999999986    368999999986432    23345678899999999 6999999999999999


Q ss_pred             EeEEEEecccCCCcccc
Q 013711          415 EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l  431 (437)
                      ..+|||||+ ++|+|.-
T Consensus       133 ~~~lv~e~~-~~~~L~~  148 (355)
T 1vzo_A          133 KLHLILDYI-NGGELFT  148 (355)
T ss_dssp             EEEEEECCC-CSCBHHH
T ss_pred             eEEEEeecC-CCCCHHH
Confidence            999999999 9999853

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.91  E-value=1.7e-09  Score=112.47  Aligned_cols=79  Identities=29%  Similarity=0.432  Sum_probs=66.4

Q ss_pred             CccccccceeEEEEEeC---CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLP---SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||+|.+.   .+..||||+++...  ....+++.+|+.+|.+++|||||++++++. .+..+|||||+ +
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~-~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMA-E  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECC-T
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEcc-C
Confidence            47999999999999753   45789999997532  234578999999999999999999999986 45688999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|.-
T Consensus       453 ~g~L~~  458 (635)
T 4fl3_A          453 LGPLNK  458 (635)
T ss_dssp             TEEHHH
T ss_pred             CCCHHH
Confidence            998863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.90  E-value=1.4e-09  Score=101.11  Aligned_cols=82  Identities=28%  Similarity=0.390  Sum_probs=69.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe-----------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-----------  412 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----------  412 (437)
                      .+|...+.||+|+||.||++... +++.||+|.+....    +.+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            46788899999999999999975 68999999996543    357889999999999999999998864           


Q ss_pred             -----CCEeEEEEecccCCCcccc
Q 013711          413 -----GEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       413 -----~~~~~lv~E~~~~~gsL~l  431 (437)
                           ....++||||+ ++|+|.-
T Consensus        87 ~~~~~~~~~~lv~e~~-~~~~L~~  109 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFC-DKGTLEQ  109 (284)
T ss_dssp             --CCEEEEEEEEECCC-CSCBHHH
T ss_pred             ccccCcceEEEEEecc-CCCCHHH
Confidence                 34589999999 9988853

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.90  E-value=1.1e-09  Score=105.09  Aligned_cols=87  Identities=23%  Similarity=0.350  Sum_probs=73.6

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCC--CCccceEeEEEeCCEeEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQH--RNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~l  418 (437)
                      ..+.|.+.+.||+|+||.||++...+++.||||.+....  ....+.+.+|+.++.+++|  +||+++++++...+..+|
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            445688899999999999999998889999999986432  2334678999999999976  999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      |||+.  +|+|.-
T Consensus        87 v~e~~--~~~L~~   97 (343)
T 3dbq_A           87 VMECG--NIDLNS   97 (343)
T ss_dssp             EECCC--SEEHHH
T ss_pred             EEeCC--CCCHHH
Confidence            99954  777653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.89  E-value=2e-09  Score=103.91  Aligned_cols=95  Identities=22%  Similarity=0.297  Sum_probs=78.8

Q ss_pred             cccchhhHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-----CCCccce
Q 013711          333 LQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-----HRNLVRL  406 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l  406 (437)
                      ..+++++.....++|...++||+|+||.||++.. .+++.||||++... ....+.+..|+.++..++     ||||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            3455666666678899999999999999999987 46889999998642 233456788999999886     9999999


Q ss_pred             EeEEEeCCEeEEEEecccCCCccc
Q 013711          407 LGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       407 ~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ++++...+..+|||||+  +++|.
T Consensus       102 ~~~~~~~~~~~lv~e~~--~~~L~  123 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL--GPSLY  123 (360)
T ss_dssp             EEEEEETTEEEEEECCC--CCBHH
T ss_pred             cceeeECCeeEEEEcCC--CCCHH
Confidence            99999999999999999  66664

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.89  E-value=1.3e-09  Score=114.41  Aligned_cols=87  Identities=16%  Similarity=0.343  Sum_probs=73.0

Q ss_pred             cccccccCccccccceeEEEEEeC--CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE-----
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP--SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE-----  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~--~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  415 (437)
                      .++|.+.+.||+|+||.||++...  +++.||||.+.... ....+.+.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            367888999999999999999874  58899999986432 2334578999999999999999999999987554     


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .+|||||+ ++++|.-
T Consensus       159 ~~lv~E~~-~g~~L~~  173 (681)
T 2pzi_A          159 GYIVMEYV-GGQSLKR  173 (681)
T ss_dssp             EEEEEECC-CCEECC-
T ss_pred             eEEEEEeC-CCCcHHH
Confidence            79999999 9998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.89  E-value=4e-09  Score=100.85  Aligned_cols=85  Identities=22%  Similarity=0.414  Sum_probs=72.6

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhc--CCCCCccceEeEEEeCC----E
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAK--LQHRNLVRLLGFCLEGE----E  415 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~  415 (437)
                      ...++|...+.||+|+||.||++.. +++.||||.+...   ..+.+.+|.+++..  ++||||+++++++....    .
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            3446788999999999999999998 6899999998643   34678889988887  79999999999998875    7


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .++||||+ ++|+|.-
T Consensus       115 ~~lv~e~~-~~g~L~~  129 (342)
T 1b6c_B          115 LWLVSDYH-EHGSLFD  129 (342)
T ss_dssp             EEEEECCC-TTCBHHH
T ss_pred             eEEEEeec-CCCcHHH
Confidence            89999999 9998853

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.88  E-value=8.5e-10  Score=105.63  Aligned_cols=87  Identities=25%  Similarity=0.375  Sum_probs=72.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc--------cCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG--------QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      .++|...+.||+|+||.||++.. .+++.||||.+.....        ...+.+.+|+.++++++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            35688889999999999999985 4688999999965321        13346788999999999999999999999999


Q ss_pred             EeEEEEecccCCC-cccc
Q 013711          415 EKILVYEFTLKNK-DNWI  431 (437)
Q Consensus       415 ~~~lv~E~~~~~g-sL~l  431 (437)
                      ..++||||+ .+| +|.-
T Consensus       103 ~~~lv~e~~-~~g~~l~~  119 (335)
T 3dls_A          103 FFQLVMEKH-GSGLDLFA  119 (335)
T ss_dssp             EEEEEEECC-TTSCBHHH
T ss_pred             EEEEEEEeC-CCCccHHH
Confidence            999999999 655 7653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.88  E-value=1e-09  Score=106.77  Aligned_cols=85  Identities=29%  Similarity=0.510  Sum_probs=69.2

Q ss_pred             cccccCccccccceeEEEEEeC--CC--CEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP--SG--QEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILV  419 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~--~~--~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv  419 (437)
                      .|...+.||+|+||.||+|.+.  ++  ..||+|.++... ....+.|.+|+.++++++||||+++++++.. .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3566789999999999999863  22  468999986532 3345789999999999999999999998765 4578999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus       170 ~e~~-~~g~L~~  180 (373)
T 3c1x_A          170 LPYM-KHGDLRN  180 (373)
T ss_dssp             EECC-TTCBHHH
T ss_pred             EECC-CCCCHHH
Confidence            9999 9999854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.88  E-value=3.9e-09  Score=100.44  Aligned_cols=83  Identities=23%  Similarity=0.427  Sum_probs=72.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEe--CCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLE--GEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||++.. .+++.||+|+++.   ...+.+.+|+.++.+++ ||||+++++++..  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688889999999999999985 5689999999864   34578999999999996 9999999999988  56789999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus       113 e~~-~~~~l~~  122 (330)
T 3nsz_A          113 EHV-NNTDFKQ  122 (330)
T ss_dssp             ECC-CCCCHHH
T ss_pred             ecc-CchhHHH
Confidence            999 8888743

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.88  E-value=1.6e-09  Score=101.50  Aligned_cols=86  Identities=28%  Similarity=0.463  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~l  418 (437)
                      ..|...+.||+|+||.||++...+    ...+|+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            457778999999999999998632    2358999987533 2345679999999999999999999998755 457899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       105 v~e~~-~~~~L~~  116 (298)
T 3f66_A          105 VLPYM-KHGDLRN  116 (298)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEeCC-CCCCHHH
Confidence            99999 9999853

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.87  E-value=1.6e-09  Score=100.69  Aligned_cols=87  Identities=32%  Similarity=0.498  Sum_probs=71.1

Q ss_pred             hhcccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      ...++|...+.||+|+||.||++...+    +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+ +..
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~   87 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT   87 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence            345678888999999999999998632    3469999997542 2345679999999999999999999998764 557


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++||||+ ++++|.
T Consensus        88 ~~v~e~~-~~~~L~  100 (281)
T 3cc6_A           88 WIIMELY-PYGELG  100 (281)
T ss_dssp             EEEEECC-TTCBHH
T ss_pred             EEEEecC-CCCCHH
Confidence            8999999 998875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.87  E-value=9.6e-10  Score=104.68  Aligned_cols=84  Identities=29%  Similarity=0.419  Sum_probs=68.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc-CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ-GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|+||.||++... +++.||+|.+...... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            35778899999999999999974 6889999998653321 122456899999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + + |+|.
T Consensus        82 ~-~-~~l~   87 (324)
T 3mtl_A           82 L-D-KDLK   87 (324)
T ss_dssp             C-S-EEHH
T ss_pred             c-c-cCHH
Confidence            9 6 4543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.86  E-value=1.6e-09  Score=101.40  Aligned_cols=84  Identities=30%  Similarity=0.438  Sum_probs=68.6

Q ss_pred             ccccCccccccceeEEEEEeC-C---CCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe-EEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-S---GQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK-ILVY  420 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~---~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lv~  420 (437)
                      |...+.||+|+||.||++... +   +..+|+|.+..... ...+.+.+|+.++++++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            455689999999999999853 2   23799999875332 3456799999999999999999999999876654 9999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ .+|+|.-
T Consensus       103 e~~-~~~~L~~  112 (298)
T 3pls_A          103 PYM-CHGDLLQ  112 (298)
T ss_dssp             CCC-TTCBHHH
T ss_pred             ecc-cCCCHHH
Confidence            999 9998864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.86  E-value=1.7e-09  Score=108.20  Aligned_cols=84  Identities=18%  Similarity=0.406  Sum_probs=60.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  416 (437)
                      ++|.+.+.||+|+||.||++... +++.||||++...  .....+.+.+|+.+|++++|||||++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            56888999999999999999864 6899999998653  223356789999999999999999999998543     468


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      +|||||+ . |+|+
T Consensus       133 ~lv~e~~-~-~~L~  144 (458)
T 3rp9_A          133 YVVLEIA-D-SDFK  144 (458)
T ss_dssp             EEEECCC-S-EEHH
T ss_pred             EEEEecc-c-cchh
Confidence            9999998 4 5554

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.86  E-value=3.2e-09  Score=99.78  Aligned_cols=82  Identities=27%  Similarity=0.436  Sum_probs=68.2

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC----ccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS----GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  417 (437)
                      ++|.+.+.||+|+||.||++... ++..+|+|.+....    ....+.+.+|+.++++++||||+++++++..  ....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            56888999999999999999964 58899999996432    2335679999999999999999999999854  45789


Q ss_pred             EEEecccCCC
Q 013711          418 LVYEFTLKNK  427 (437)
Q Consensus       418 lv~E~~~~~g  427 (437)
                      +||||+ +++
T Consensus        85 lv~e~~-~~~   93 (305)
T 2wtk_C           85 MVMEYC-VCG   93 (305)
T ss_dssp             EEEECC-SEE
T ss_pred             EEehhc-cCC
Confidence            999999 766

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.86  E-value=4.8e-09  Score=100.06  Aligned_cols=84  Identities=19%  Similarity=0.426  Sum_probs=69.2

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC--CCCCccceEeEEEeC----CEe
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL--QHRNLVRLLGFCLEG----EEK  416 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~g~~~~~----~~~  416 (437)
                      ..++|...+.||+|+||.||++.. .++.||||++...   ....+..|.+++..+  +||||+++++++...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            346788999999999999999998 5899999998543   234556666666654  899999999999887    789


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|.-
T Consensus       111 ~lv~e~~-~~g~L~~  124 (337)
T 3mdy_A          111 YLITDYH-ENGSLYD  124 (337)
T ss_dssp             EEEECCC-TTCBHHH
T ss_pred             EEEEecc-CCCcHHH
Confidence            9999999 9999853

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.85  E-value=4e-09  Score=101.42  Aligned_cols=81  Identities=28%  Similarity=0.515  Sum_probs=68.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC--------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG--------  413 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------  413 (437)
                      ++|...+.||+|+||.||++.. .+++.||+|++....  ......+.+|+.++..++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688889999999999999997 468999999986432  23346788999999999999999999999873        


Q ss_pred             CEeEEEEecccCC
Q 013711          414 EEKILVYEFTLKN  426 (437)
Q Consensus       414 ~~~~lv~E~~~~~  426 (437)
                      +..+|||||+ ++
T Consensus        97 ~~~~lv~e~~-~~  108 (351)
T 3mi9_A           97 GSIYLVFDFC-EH  108 (351)
T ss_dssp             CEEEEEEECC-SE
T ss_pred             ceEEEEEecc-CC
Confidence            4689999999 64

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.85  E-value=4e-09  Score=102.87  Aligned_cols=68  Identities=26%  Similarity=0.469  Sum_probs=54.0

Q ss_pred             HhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      +...++|...+.||+|+||.||++.. .+++.||+|++.....    ...+|+.+|+.++||||+++++++..
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeee
Confidence            34556788999999999999999986 5689999999864322    23479999999999999999999854

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.85  E-value=2.4e-09  Score=102.84  Aligned_cols=84  Identities=26%  Similarity=0.398  Sum_probs=66.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCcc-----CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQ-----GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .++|...+.||+|+||.||++... +|+.||||.+......     ..+.+.+|+.++.+++||||+++++++...+..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            456888899999999999999974 5899999999643211     1246889999999999999999999999999999


Q ss_pred             EEEecccCCCcc
Q 013711          418 LVYEFTLKNKDN  429 (437)
Q Consensus       418 lv~E~~~~~gsL  429 (437)
                      +||||+ ++ +|
T Consensus        89 lv~e~~-~~-~l   98 (346)
T 1ua2_A           89 LVFDFM-ET-DL   98 (346)
T ss_dssp             EEEECC-SE-EH
T ss_pred             EEEEcC-CC-CH
Confidence            999999 64 44

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.85  E-value=2.5e-09  Score=106.10  Aligned_cols=85  Identities=18%  Similarity=0.401  Sum_probs=70.9

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  415 (437)
                      .++|...+.||+|+||.||++... +++.||||++...  .....+.+.+|+.++++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            357888999999999999999864 5789999999653  223346789999999999999999999998775     56


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .+|||||+ . |+|.
T Consensus       105 ~~lv~e~~-~-~~L~  117 (432)
T 3n9x_A          105 LYIVLEIA-D-SDLK  117 (432)
T ss_dssp             EEEEEECC-S-EEHH
T ss_pred             EEEEEecC-C-cCHH
Confidence            99999999 4 5664

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.84  E-value=3.3e-09  Score=103.74  Aligned_cols=85  Identities=24%  Similarity=0.362  Sum_probs=72.3

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCC--CCCccceEeEEEeCCEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQ--HRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv  419 (437)
                      ...|.+.+.||+|+||.||++....++.||||++....  ....+.+.+|+.+|.+++  ||||+++++++...+..+||
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            34588899999999999999998779999999986432  234567999999999996  59999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      || + .+++|.
T Consensus       135 ~E-~-~~~~L~  143 (390)
T 2zmd_A          135 ME-C-GNIDLN  143 (390)
T ss_dssp             EE-C-CSEEHH
T ss_pred             Ee-c-CCCCHH
Confidence            99 4 577774

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.84  E-value=7.2e-10  Score=105.00  Aligned_cols=94  Identities=20%  Similarity=0.432  Sum_probs=78.0

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      ..++++...++|...+.||+|+||.||++...+  .+|+|.++...  ....+.+.+|+.++.+++||||+++++++...
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            345556667889999999999999999998743  49999986432  23345688999999999999999999999999


Q ss_pred             CEeEEEEecccCCCccccc
Q 013711          414 EEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l~  432 (437)
                      +..++|+||+ ++++|.-.
T Consensus       102 ~~~~iv~e~~-~~~~L~~~  119 (319)
T 2y4i_B          102 PHLAIITSLC-KGRTLYSV  119 (319)
T ss_dssp             SCEEEECBCC-CSEEHHHH
T ss_pred             CceEEEeecc-cCCcHHHH
Confidence            9999999999 98888643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.84  E-value=1.6e-09  Score=108.51  Aligned_cols=84  Identities=23%  Similarity=0.354  Sum_probs=69.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            45688899999999999999985 45889999999653  233456789999999999999999999998654      3


Q ss_pred             EeEEEEecccCCCc
Q 013711          415 EKILVYEFTLKNKD  428 (437)
Q Consensus       415 ~~~lv~E~~~~~gs  428 (437)
                      ..+|||||+ +++.
T Consensus       141 ~~~lv~E~~-~~~l  153 (464)
T 3ttj_A          141 DVYLVMELM-DANL  153 (464)
T ss_dssp             EEEEEEECC-SEEH
T ss_pred             eEEEEEeCC-CCCH
Confidence            579999999 6553

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.84  E-value=3.4e-09  Score=110.62  Aligned_cols=91  Identities=21%  Similarity=0.398  Sum_probs=73.9

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG  413 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  413 (437)
                      +.+...++|...+.||+|+||.||+|....    +..||+|.++... ....+.|.+|+.++++++||||+++++++. .
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            344555678888999999999999998632    4579999987533 233467999999999999999999999884 5


Q ss_pred             CEeEEEEecccCCCcccc
Q 013711          414 EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~l  431 (437)
                      +..++||||+ ++|+|.-
T Consensus       463 ~~~~lv~E~~-~~g~L~~  479 (656)
T 2j0j_A          463 NPVWIIMELC-TLGELRS  479 (656)
T ss_dssp             SSCEEEEECC-TTCBHHH
T ss_pred             CceEEEEEcC-CCCcHHH
Confidence            6689999999 9999863

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.83  E-value=2e-09  Score=102.48  Aligned_cols=85  Identities=28%  Similarity=0.469  Sum_probs=68.5

Q ss_pred             ccccccCccccccceeEEEEEeC-CCC----EEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++|...+.||+|+||.||++... ++.    .|++|.+.... ....+.+.+|+.++.+++||||+++++++. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            45778899999999999999863 344    38888875432 333456889999999999999999999886 456889


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      |+||+ ++|+|.-
T Consensus        92 v~e~~-~~~~L~~  103 (325)
T 3kex_A           92 VTQYL-PLGSLLD  103 (325)
T ss_dssp             EEECC-TTCBSHH
T ss_pred             EEEeC-CCCCHHH
Confidence            99999 9999853

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.83  E-value=2.1e-09  Score=102.49  Aligned_cols=90  Identities=30%  Similarity=0.392  Sum_probs=73.0

Q ss_pred             hHHhhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEe----
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLE----  412 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~----  412 (437)
                      .++....+|...++||+|+||.||++.. .+++.||+|++........+.+.+|+.++.++. ||||+++++++..    
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            3344456788899999999999999996 468999999986655555678999999999995 9999999999853    


Q ss_pred             ----CCEeEEEEecccCCCccc
Q 013711          413 ----GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       413 ----~~~~~lv~E~~~~~gsL~  430 (437)
                          ....++|+||+ . |+|.
T Consensus       102 ~~~~~~~~~lv~e~~-~-g~L~  121 (337)
T 3ll6_A          102 SDTGQAEFLLLTELC-K-GQLV  121 (337)
T ss_dssp             STTSSEEEEEEEECC-S-EEHH
T ss_pred             cccCCceEEEEEEec-C-CCHH
Confidence                34589999999 5 5653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.82  E-value=5.2e-09  Score=99.76  Aligned_cols=82  Identities=22%  Similarity=0.257  Sum_probs=69.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...+.||+|+||.||++.. .+++.||||.+.....  .+.+.+|+.+++++ +||||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5688889999999999999985 5689999999865432  34688999999999 999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      +  +++|.
T Consensus        87 ~--~~~L~   92 (330)
T 2izr_A           87 L--GPSLE   92 (330)
T ss_dssp             C--CCBHH
T ss_pred             C--CCCHH
Confidence            9  66664

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.82  E-value=3e-09  Score=99.24  Aligned_cols=85  Identities=33%  Similarity=0.479  Sum_probs=63.4

Q ss_pred             cccccccCccccccceeEEEEEeC--CCC--EEEEEEccccC---ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP--SGQ--EIAVKRLSKAS---GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~--~~~--~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .++|...+.||+|+||.||++.+.  ++.  .||+|.++...   ....+.+.+|+.++.+++||||+++++++..+. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            456888899999999999999853  233  68999986532   233567999999999999999999999987654 8


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++|+||+ ++++|.
T Consensus        96 ~~v~e~~-~~~~L~  108 (291)
T 1u46_A           96 KMVTELA-PLGSLL  108 (291)
T ss_dssp             EEEEECC-TTCBHH
T ss_pred             eeeEecc-cCCCHH
Confidence            8999999 998875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.80  E-value=5.1e-09  Score=97.61  Aligned_cols=86  Identities=22%  Similarity=0.280  Sum_probs=67.1

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc-cCH-HHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG-QGA-EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~-~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ...++|...+.||+|+||.||++.. .+++.||+|++..... ... +.+..+...++.++||||+++++++..++..++
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            3456788899999999999999986 4688999999965322 222 334455556888899999999999999999999


Q ss_pred             EEecccCCCcc
Q 013711          419 VYEFTLKNKDN  429 (437)
Q Consensus       419 v~E~~~~~gsL  429 (437)
                      ||||+ ++ +|
T Consensus        84 v~e~~-~~-~l   92 (290)
T 3fme_A           84 CMELM-DT-SL   92 (290)
T ss_dssp             EEECC-SE-EH
T ss_pred             EEehh-cc-ch
Confidence            99999 64 54

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.80  E-value=5.4e-09  Score=109.41  Aligned_cols=89  Identities=22%  Similarity=0.186  Sum_probs=75.3

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  417 (437)
                      ..++|...++||+|+||.||++... +++.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            3467888899999999999999864 5789999999642   234456788999999988 7999999999999999999


Q ss_pred             EEEecccCCCccccc
Q 013711          418 LVYEFTLKNKDNWIG  432 (437)
Q Consensus       418 lv~E~~~~~gsL~l~  432 (437)
                      |||||+ ++|+|+-.
T Consensus       419 lV~E~~-~gg~L~~~  432 (674)
T 3pfq_A          419 FVMEYV-NGGDLMYH  432 (674)
T ss_dssp             EEEECC-CSCBHHHH
T ss_pred             EEEeCc-CCCcHHHH
Confidence            999999 99998643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.80  E-value=9.7e-09  Score=97.86  Aligned_cols=86  Identities=30%  Similarity=0.507  Sum_probs=70.6

Q ss_pred             cccccccCccccccceeEEEEEeC-CCC----EEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .++|...+.||+|+||.||++... +++    .|++|.+... .....+.+.+|+.++.+++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            356888899999999999999863 343    4688887543 3455788999999999999999999999998755 78


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +|+||+ ++|+|.-
T Consensus        93 ~v~~~~-~~g~L~~  105 (327)
T 3lzb_A           93 LITQLM-PFGCLLD  105 (327)
T ss_dssp             EEECCC-SSCBHHH
T ss_pred             EEEEec-CCCcHHH
Confidence            999999 9998853

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.79  E-value=8.8e-09  Score=101.17  Aligned_cols=79  Identities=24%  Similarity=0.452  Sum_probs=60.3

Q ss_pred             ccc-cCccccccceeEEEEEeC---CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEEEE
Q 013711          347 FST-DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILVY  420 (437)
Q Consensus       347 ~~~-~~~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~  420 (437)
                      |.. .++||+|+||.||++...   ++..||+|.+...  ...+.+.+|+.+|++++||||+++++++..  ....+|||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            443 568999999999999964   4788999999643  233578999999999999999999999965  66899999


Q ss_pred             ecccCCCcc
Q 013711          421 EFTLKNKDN  429 (437)
Q Consensus       421 E~~~~~gsL  429 (437)
                      ||+ .+ +|
T Consensus       100 e~~-~~-~l  106 (405)
T 3rgf_A          100 DYA-EH-DL  106 (405)
T ss_dssp             ECC-SE-EH
T ss_pred             eCC-CC-CH
Confidence            999 54 54

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.79  E-value=3.5e-09  Score=100.12  Aligned_cols=94  Identities=23%  Similarity=0.381  Sum_probs=76.9

Q ss_pred             cchhhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCC--CCCccceEeEE
Q 013711          335 FDFETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQ--HRNLVRLLGFC  410 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~g~~  410 (437)
                      +.++.+....+.|...+.||+|+||.||++...+++.||+|.+....  ....+.+.+|+.++.+++  |+||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            34445555667789999999999999999998889999999986432  234567899999999996  59999999999


Q ss_pred             EeCCEeEEEEecccCCCccc
Q 013711          411 LEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ...+..++||| + .+++|.
T Consensus        98 ~~~~~~~lv~e-~-~~~~L~  115 (313)
T 3cek_A           98 ITDQYIYMVME-C-GNIDLN  115 (313)
T ss_dssp             ECSSEEEEEEC-C-CSEEHH
T ss_pred             ecCCEEEEEEe-c-CCCcHH
Confidence            99999999999 4 477764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.78  E-value=7.5e-09  Score=100.46  Aligned_cols=82  Identities=22%  Similarity=0.343  Sum_probs=68.6

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      .++|...+.||+|+||.||++.. .+++.||||.+....  ....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            35688889999999999999986 458899999986532  233467889999999999999999999997654      


Q ss_pred             EeEEEEecccCC
Q 013711          415 EKILVYEFTLKN  426 (437)
Q Consensus       415 ~~~lv~E~~~~~  426 (437)
                      ..++||||+ ++
T Consensus       104 ~~~lv~e~~-~~  114 (371)
T 2xrw_A          104 DVYIVMELM-DA  114 (371)
T ss_dssp             EEEEEEECC-SE
T ss_pred             ceEEEEEcC-CC
Confidence            789999999 64

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.78  E-value=8e-09  Score=100.84  Aligned_cols=85  Identities=28%  Similarity=0.528  Sum_probs=62.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCC--EeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGE--EKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~  417 (437)
                      .++|...+.||+|+||.||++.. .+++.||||.+...  .....+.+.+|+.++.++. ||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            35688889999999999999986 46899999998643  2234567889999999996 999999999998654  689


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ + |+|.
T Consensus        88 lv~e~~-~-~~L~   98 (388)
T 3oz6_A           88 LVFDYM-E-TDLH   98 (388)
T ss_dssp             EEEECC-S-EEHH
T ss_pred             EEeccc-C-cCHH
Confidence            999999 5 5554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.78  E-value=8.3e-09  Score=98.13  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=68.0

Q ss_pred             hhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHH-HHhcCCCCCccceEeEEEeCCEeEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVV-LVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ...++|...+.||+|+||.||++... +++.||||.+.... .....++..|+. +++.++||||+++++++...+..++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            34567888899999999999999974 68899999997542 223345666666 6777899999999999999999999


Q ss_pred             EEecccCC
Q 013711          419 VYEFTLKN  426 (437)
Q Consensus       419 v~E~~~~~  426 (437)
                      ||||+ ++
T Consensus        99 v~e~~-~~  105 (327)
T 3aln_A           99 CMELM-ST  105 (327)
T ss_dssp             EECCC-SE
T ss_pred             EEeec-CC
Confidence            99999 64

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.77  E-value=1e-08  Score=100.56  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=64.8

Q ss_pred             ccccc-CccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhc-CCCCCccceEeEEEe----CCEeEE
Q 013711          346 KFSTD-NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAK-LQHRNLVRLLGFCLE----GEEKIL  418 (437)
Q Consensus       346 ~~~~~-~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~l  418 (437)
                      +|... +.||+|+||.||++... +++.||||++..     ...+.+|+.++.+ .+||||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            34443 68999999999999864 588999999853     2467888888744 589999999999875    567899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|+-
T Consensus       137 v~E~~-~gg~L~~  148 (400)
T 1nxk_A          137 VMECL-DGGELFS  148 (400)
T ss_dssp             EEECC-CSEEHHH
T ss_pred             EEEeC-CCCcHHH
Confidence            99999 9999853

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.76  E-value=2.3e-09  Score=104.28  Aligned_cols=86  Identities=10%  Similarity=0.178  Sum_probs=66.8

Q ss_pred             hcccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHH---HHHhcCCCCCccceE-------e
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEV---VLVAKLQHRNLVRLL-------G  408 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g  408 (437)
                      ..++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+   .++++++|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            346788889999999999999996 46899999999743   223357799999   556666899999998       5


Q ss_pred             EEEeCC-----------------EeEEEEecccCCCccc
Q 013711          409 FCLEGE-----------------EKILVYEFTLKNKDNW  430 (437)
Q Consensus       409 ~~~~~~-----------------~~~lv~E~~~~~gsL~  430 (437)
                      ++...+                 ..+|||||+ . |+|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~-g~L~  187 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-Q-SNLQ  187 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-S-EEHH
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-C-CCHH
Confidence            555442                 278999999 4 6775

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.75  E-value=5.8e-09  Score=101.11  Aligned_cols=84  Identities=25%  Similarity=0.373  Sum_probs=63.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------E
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------E  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~  415 (437)
                      +.|...+.||+|+||.||++.. .+|+.||||.+....  ....+.+.+|+.+++.++||||+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            5678889999999999999986 468999999995432  223467899999999999999999999987653      4


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++||||+  +++|.
T Consensus       105 ~~lv~e~~--~~~L~  117 (367)
T 1cm8_A          105 FYLVMPFM--GTDLG  117 (367)
T ss_dssp             CEEEEECC--SEEHH
T ss_pred             EEEEEecC--CCCHH
Confidence            69999999  55653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.75  E-value=8.1e-09  Score=99.23  Aligned_cols=85  Identities=20%  Similarity=0.371  Sum_probs=70.1

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  416 (437)
                      .++|...+.||+|+||.||++... +|+.||||.+.... ......+.+|+.++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            457888899999999999999974 58899999996432 22345788999999999999999999988764     678


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++|+||+ . |+|.
T Consensus        90 ~lv~e~~-~-~~L~  101 (353)
T 2b9h_A           90 YIIQELM-Q-TDLH  101 (353)
T ss_dssp             EEEECCC-S-EEHH
T ss_pred             EEEEecc-C-ccHH
Confidence            9999999 5 5653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.75  E-value=1.7e-08  Score=94.83  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=66.1

Q ss_pred             ccccc-CccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHH-hcCCCCCccceEeEEEe----CCEeEE
Q 013711          346 KFSTD-NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLV-AKLQHRNLVRLLGFCLE----GEEKIL  418 (437)
Q Consensus       346 ~~~~~-~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~l  418 (437)
                      +|... +.||+|+||.||++.. .+++.||+|.++.     ...+.+|+.++ +.++||||+++++++..    ....+|
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            34444 7799999999999986 4689999999853     34678898888 55699999999999887    667899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus        93 v~e~~-~~~~L~~  104 (299)
T 3m2w_A           93 VMECL-DGGELFS  104 (299)
T ss_dssp             EECCC-CSCBHHH
T ss_pred             EEeec-CCCcHHH
Confidence            99999 9998853

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.74  E-value=2.1e-08  Score=95.65  Aligned_cols=84  Identities=30%  Similarity=0.399  Sum_probs=65.5

Q ss_pred             hcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHH--HhcCCCCCccceEeEEEe-----CCE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVL--VAKLQHRNLVRLLGFCLE-----GEE  415 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~-----~~~  415 (437)
                      ..++|...+.||+|+||.||++.. +++.||||++...   ..+.+..|.++  +..++|+||+++++.+..     ...
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            346788889999999999999987 7899999998643   23445555555  445899999999986653     235


Q ss_pred             eEEEEecccCCCcccc
Q 013711          416 KILVYEFTLKNKDNWI  431 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l  431 (437)
                      .+|||||+ ++|+|.-
T Consensus        87 ~~lv~e~~-~~g~L~~  101 (336)
T 3g2f_A           87 YLLVMEYY-PNGSLXK  101 (336)
T ss_dssp             EEEEECCC-TTCBHHH
T ss_pred             EEEEEecC-CCCcHHH
Confidence            78999999 9999853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.74  E-value=1.2e-08  Score=98.37  Aligned_cols=87  Identities=22%  Similarity=0.330  Sum_probs=60.0

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE--
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE--  415 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--  415 (437)
                      ......++|...+.||+|+||.||++... ++..||||++.... ...+.+.+|+..+..++||||+++++++.....  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34555678999999999999999999974 58999999985432 223456788888888999999999999876433  


Q ss_pred             -----eEEEEecccCCC
Q 013711          416 -----KILVYEFTLKNK  427 (437)
Q Consensus       416 -----~~lv~E~~~~~g  427 (437)
                           .++||||+ +++
T Consensus        96 ~~~~~~~lv~e~~-~~~  111 (360)
T 3e3p_A           96 RRDIYLNVVMEYV-PDT  111 (360)
T ss_dssp             TTCEEEEEEEECC-SCB
T ss_pred             ccceeEEEEeecc-ccc
Confidence                 88999999 654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.73  E-value=1.1e-08  Score=98.86  Aligned_cols=85  Identities=15%  Similarity=0.323  Sum_probs=70.0

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  416 (437)
                      ..+|...+.||+|+||.||++... ++..||+|.+.... ....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            356888999999999999999864 67899999997533 23346789999999999999999999998764     368


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++|+||+ . |+|+
T Consensus       106 ~iv~e~~-~-~~L~  117 (364)
T 3qyz_A          106 YIVQDLM-E-TDLY  117 (364)
T ss_dssp             EEEEECC-S-EEHH
T ss_pred             EEEEccc-C-cCHH
Confidence            9999999 5 5654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.73  E-value=9.3e-09  Score=99.68  Aligned_cols=85  Identities=24%  Similarity=0.365  Sum_probs=66.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------C
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------E  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~  414 (437)
                      .++|...+.||+|+||.||++.. .+|+.||||++....  ....+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            35688889999999999999985 468899999996532  23346788999999999999999999998754      5


Q ss_pred             EeEEEEecccCCCccc
Q 013711          415 EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~  430 (437)
                      ..++|+||+  +++|.
T Consensus       108 ~~~lv~e~~--~~~L~  121 (367)
T 2fst_X          108 DVYLVTHLM--GADLN  121 (367)
T ss_dssp             CCEEEEECC--CEECC
T ss_pred             eEEEEeccc--CCCHH
Confidence            679999999  56664

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.72  E-value=4.2e-09  Score=99.41  Aligned_cols=86  Identities=27%  Similarity=0.409  Sum_probs=64.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc------CHHHHHHHHHHHhcC----CCCCccceEeEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ------GAEEFKNEVVLVAKL----QHRNLVRLLGFCLE  412 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~g~~~~  412 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+......      ....+.+|+.++.++    +|+||+++++++..
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~  109 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET  109 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence            45688889999999999999986 46889999999653321      223466788888888    89999999999999


Q ss_pred             CCEeEEEEec-ccCCCccc
Q 013711          413 GEEKILVYEF-TLKNKDNW  430 (437)
Q Consensus       413 ~~~~~lv~E~-~~~~gsL~  430 (437)
                      .+..++|+|| + ++++|.
T Consensus       110 ~~~~~~v~e~~~-~~~~L~  127 (312)
T 2iwi_A          110 QEGFMLVLERPL-PAQDLF  127 (312)
T ss_dssp             ---CEEEEECCS-SEEEHH
T ss_pred             CCeEEEEEEecC-CCCCHH
Confidence            8999999999 6 788874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.72  E-value=8.8e-09  Score=97.76  Aligned_cols=86  Identities=28%  Similarity=0.470  Sum_probs=67.3

Q ss_pred             hcccccccCccccccceeEEEEEe--CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcC---CCCCccceEeEEE----
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL---QHRNLVRLLGFCL----  411 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~--~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~----  411 (437)
                      ..++|...+.||+|+||.||++..  .+++.||+|++....  ......+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            446788899999999999999987  357899999986432  22234567777777665   8999999999987    


Q ss_pred             -eCCEeEEEEecccCCCccc
Q 013711          412 -EGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 -~~~~~~lv~E~~~~~gsL~  430 (437)
                       .....++|+||+ + |+|.
T Consensus        89 ~~~~~~~lv~e~~-~-~~L~  106 (326)
T 1blx_A           89 DRETKLTLVFEHV-D-QDLT  106 (326)
T ss_dssp             SSEEEEEEEEECC-S-CBHH
T ss_pred             CCCceEEEEEecC-C-CCHH
Confidence             456789999999 6 5654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.71  E-value=1.1e-08  Score=99.33  Aligned_cols=84  Identities=26%  Similarity=0.443  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe-----
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK-----  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-----  416 (437)
                      +.|...+.||+|+||.||++... +++.||||.+....  ....+.+.+|+.+++.++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            56788899999999999999864 58899999997532  22346789999999999999999999999876654     


Q ss_pred             -EEEEecccCCCccc
Q 013711          417 -ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 -~lv~E~~~~~gsL~  430 (437)
                       ++||||+ . ++|.
T Consensus       122 ~~lv~e~~-~-~~l~  134 (371)
T 4exu_A          122 FYLVMPFM-Q-TDLQ  134 (371)
T ss_dssp             CEEEEECC-C-EEHH
T ss_pred             EEEEEccc-c-ccHH
Confidence             9999999 5 5553

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.71  E-value=1.5e-08  Score=99.29  Aligned_cols=80  Identities=23%  Similarity=0.372  Sum_probs=64.6

Q ss_pred             cccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------EeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------EKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~  417 (437)
                      ...|...+.||+|+||.||++....+..+|+|.+.....    ...+|+.+++.++||||+++++++....      ..+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            345888899999999999999987777799998854322    1247999999999999999999986543      388


Q ss_pred             EEEecccCCCc
Q 013711          418 LVYEFTLKNKD  428 (437)
Q Consensus       418 lv~E~~~~~gs  428 (437)
                      +||||+ +++.
T Consensus       115 lv~e~~-~~~l  124 (394)
T 4e7w_A          115 LVLEYV-PETV  124 (394)
T ss_dssp             EEEECC-SEEH
T ss_pred             EEeecc-CccH
Confidence            999999 7653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.71  E-value=2.2e-08  Score=94.30  Aligned_cols=85  Identities=31%  Similarity=0.514  Sum_probs=66.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-----ccCHHHHHHHHHHHhcCC---CCCccceEeEEEeCC
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-----GQGAEEFKNEVVLVAKLQ---HRNLVRLLGFCLEGE  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~  414 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+....     ......+.+|+.+++.++   ||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            56788899999999999999995 468999999986422     122356778888877764   999999999998755


Q ss_pred             -----EeEEEEecccCCCccc
Q 013711          415 -----EKILVYEFTLKNKDNW  430 (437)
Q Consensus       415 -----~~~lv~E~~~~~gsL~  430 (437)
                           ..++||||+ . |+|.
T Consensus        88 ~~~~~~~~lv~e~~-~-~~L~  106 (308)
T 3g33_A           88 TDREIKVTLVFEHV-D-QDLR  106 (308)
T ss_dssp             SSSEEEEEEEEECC-C-CBHH
T ss_pred             CCCceeEEEEehhh-h-cCHH
Confidence                 589999999 5 4654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.70  E-value=1.4e-08  Score=97.73  Aligned_cols=84  Identities=26%  Similarity=0.438  Sum_probs=69.3

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCE------
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEE------  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------  415 (437)
                      ++|...+.||+|+||.||++... +|+.||||.+....  ....+.+.+|+.+++.++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            56788899999999999999864 68999999996532  2234678999999999999999999999987654      


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++||||+ . ++|.
T Consensus       104 ~~lv~e~~-~-~~l~  116 (353)
T 3coi_A          104 FYLVMPFM-Q-TDLQ  116 (353)
T ss_dssp             CEEEEECC-S-EEGG
T ss_pred             EEEEeccc-c-CCHH
Confidence            49999999 5 5654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.70  E-value=1.2e-08  Score=101.08  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=68.3

Q ss_pred             HhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEE
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ......|...+.||+|+||.|+.....+++.||||++.....   +.+.+|+.+++++ +|||||++++++.+....+||
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            344456888899999999996544445889999999865322   2357899999999 899999999999999999999


Q ss_pred             EecccCCCccc
Q 013711          420 YEFTLKNKDNW  430 (437)
Q Consensus       420 ~E~~~~~gsL~  430 (437)
                      |||+ + |+|.
T Consensus        97 ~E~~-~-g~L~  105 (432)
T 3p23_A           97 IELC-A-ATLQ  105 (432)
T ss_dssp             EECC-S-EEHH
T ss_pred             EECC-C-CCHH
Confidence            9999 5 4654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.70  E-value=1.8e-08  Score=100.01  Aligned_cols=79  Identities=20%  Similarity=0.165  Sum_probs=65.8

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccC
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      +...+.||+|+||.||.....+|+.||||++...   ..+.+.+|+.++.++ +|||||++++++...+..+|||||+ +
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~-~   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-N   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC-C
Confidence            3446789999999997665558999999998643   235678999999876 8999999999999999999999999 5


Q ss_pred             CCccc
Q 013711          426 NKDNW  430 (437)
Q Consensus       426 ~gsL~  430 (437)
                       |+|.
T Consensus        93 -gsL~   96 (434)
T 2rio_A           93 -LNLQ   96 (434)
T ss_dssp             -EEHH
T ss_pred             -CCHH
Confidence             5764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.69  E-value=1.2e-08  Score=100.76  Aligned_cols=78  Identities=28%  Similarity=0.460  Sum_probs=63.0

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~  417 (437)
                      ..|...+.||+|+||.||++... +++.||||.+....    +.+.+|+.+|++++|||||++++++...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            35777889999999999999974 58999999986432    2235799999999999999999988642      2367


Q ss_pred             EEEecccCCC
Q 013711          418 LVYEFTLKNK  427 (437)
Q Consensus       418 lv~E~~~~~g  427 (437)
                      |||||+ +++
T Consensus       130 lv~e~~-~~~  138 (420)
T 1j1b_A          130 LVLDYV-PET  138 (420)
T ss_dssp             EEEECC-CEE
T ss_pred             eehhcc-ccc
Confidence            999999 653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.68  E-value=2.8e-09  Score=110.26  Aligned_cols=85  Identities=25%  Similarity=0.420  Sum_probs=70.5

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEe------CCEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE------GEEK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------~~~~  416 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||++... .....+.+.+|+.++.+++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            5688899999999999999986 45889999998653 33345679999999999999999999998755      6678


Q ss_pred             EEEEecccCCCccc
Q 013711          417 ILVYEFTLKNKDNW  430 (437)
Q Consensus       417 ~lv~E~~~~~gsL~  430 (437)
                      ++||||+ ++|+|.
T Consensus        94 ~LVmEy~-~ggsL~  106 (676)
T 3qa8_A           94 LLAMEYC-EGGDLR  106 (676)
T ss_dssp             CCEEECC-SSCBHH
T ss_pred             EEEEEeC-CCCCHH
Confidence            9999999 999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.66  E-value=2.1e-08  Score=96.26  Aligned_cols=85  Identities=20%  Similarity=0.266  Sum_probs=63.5

Q ss_pred             cccccccCccccccceeEEEEEeC----CCCEEEEEEccccCcc-----------CHHHHHHHHHHHhcCCCCCccceEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSKASGQ-----------GAEEFKNEVVLVAKLQHRNLVRLLG  408 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~----~~~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~g  408 (437)
                      .++|...+.||+|+||.||++...    .+..+|+|.+......           ..+.+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            356888899999999999999974    5678999998654321           2234778889999999999999999


Q ss_pred             EEEe----CCEeEEEEecccCCCccc
Q 013711          409 FCLE----GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       409 ~~~~----~~~~~lv~E~~~~~gsL~  430 (437)
                      ++..    ....+|||||+  +++|.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~--~~~L~  139 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL--GIDLQ  139 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE--EEEHH
T ss_pred             ccccccCCCcEEEEEEecc--CCCHH
Confidence            9988    77899999999  67765

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.66  E-value=2.3e-08  Score=96.70  Aligned_cols=86  Identities=20%  Similarity=0.275  Sum_probs=65.6

Q ss_pred             hcccccccCccccccceeEEEEEeCC------CCEEEEEEccccCcc-----------CHHHHHHHHHHHhcCCCCCccc
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKASGQ-----------GAEEFKNEVVLVAKLQHRNLVR  405 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~  405 (437)
                      ..++|.+.+.||+|+||.||++....      ++.||||.+......           ....+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34578889999999999999998754      478999998654321           1123455667788889999999


Q ss_pred             eEeEEEeC----CEeEEEEecccCCCccc
Q 013711          406 LLGFCLEG----EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       406 l~g~~~~~----~~~~lv~E~~~~~gsL~  430 (437)
                      +++++...    ...+|||||+  +++|.
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~--g~~L~  139 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF--GSDLQ  139 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE--EEEHH
T ss_pred             EEeeeeeccCCcceEEEEEeCC--CCCHH
Confidence            99998774    4589999999  67765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.65  E-value=3.6e-08  Score=92.16  Aligned_cols=83  Identities=22%  Similarity=0.361  Sum_probs=71.0

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+....  ..+.+.+|+.++..+ +|+|++++++++......++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            35688889999999999999985 568999999986432  234688999999999 89999999999999999999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+  +++|.
T Consensus        87 ~~--~~~L~   93 (298)
T 1csn_A           87 LL--GPSLE   93 (298)
T ss_dssp             CC--CCBHH
T ss_pred             ec--CCCHH
Confidence            99  67764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.65  E-value=2.3e-08  Score=94.45  Aligned_cols=81  Identities=19%  Similarity=0.347  Sum_probs=59.7

Q ss_pred             hcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc-cCH-HHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          343 ATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-QGA-EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       343 ~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-~~~-~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ..++|...+.||+|+||.||++... +++.||||.+..... ... +.+..+..+++.++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3456788899999999999999974 689999999965432 222 3344455667888999999999999999999999


Q ss_pred             Eecc
Q 013711          420 YEFT  423 (437)
Q Consensus       420 ~E~~  423 (437)
                      |||+
T Consensus       103 ~e~~  106 (318)
T 2dyl_A          103 MELM  106 (318)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9999

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.63  E-value=4.3e-08  Score=99.88  Aligned_cols=81  Identities=11%  Similarity=0.132  Sum_probs=59.0

Q ss_pred             ccCccccccceeEEEEEeCCCCEEEEEEccccCcc--------CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          349 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQ--------GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ..+.||+|+||.||++.. .+..+++|........        ..+.+.+|++++++++||||+++..++...+..+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            357899999999999966 6788899886432211        1245899999999999999997777777888889999


Q ss_pred             ecccCCCcccc
Q 013711          421 EFTLKNKDNWI  431 (437)
Q Consensus       421 E~~~~~gsL~l  431 (437)
                      ||+ ++++|.-
T Consensus       419 E~~-~ggsL~~  428 (540)
T 3en9_A          419 SYI-NGKLAKD  428 (540)
T ss_dssp             ECC-CSEEHHH
T ss_pred             ECC-CCCCHHH
Confidence            999 9999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.62  E-value=6.8e-08  Score=92.32  Aligned_cols=82  Identities=16%  Similarity=0.172  Sum_probs=62.0

Q ss_pred             cccccc-CccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeEE
Q 013711          345 NKFSTD-NKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKIL  418 (437)
Q Consensus       345 ~~~~~~-~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l  418 (437)
                      ++|.+. +.||+|+||.||++... +++.||+|++...    ..........+..++||||+++++++..    ....++
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  103 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI  103 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence            456664 46999999999999875 6899999998642    1222222333566799999999999876    445899


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       104 v~e~~-~gg~L~~  115 (336)
T 3fhr_A          104 IMECM-EGGELFS  115 (336)
T ss_dssp             EEECC-TTEEHHH
T ss_pred             EEecc-CCCCHHH
Confidence            99999 9999853

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.60  E-value=1.5e-08  Score=97.40  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=65.9

Q ss_pred             cccccccCccccccceeEEEEEeCC---------CCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccc---------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS---------GQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR---------  405 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~---------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~---------  405 (437)
                      .++|.+.+.||+|+||.||++....         ++.||+|.+...     +.+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3578889999999999999998753         789999998643     36889999999999999987         


Q ss_pred             ------eEeEEEe-CCEeEEEEecccCCCccc
Q 013711          406 ------LLGFCLE-GEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       406 ------l~g~~~~-~~~~~lv~E~~~~~gsL~  430 (437)
                            +++++.. ....+|||||+  +++|.
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~--~~~L~  145 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQ  145 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC--CEEHH
T ss_pred             ccCccchhhccccCCcEEEEEecCC--CcCHH
Confidence                  6777776 67899999999  67765

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.59  E-value=6.2e-08  Score=95.92  Aligned_cols=83  Identities=17%  Similarity=0.292  Sum_probs=67.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcC------CCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKL------QHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~~~  417 (437)
                      .+|...+.||+|+||.||++... +++.||||++.... ...+.+.+|+.++..+      .|+||+++++++......+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            45888899999999999999864 58899999996532 2345677888887776      5779999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ . ++|+
T Consensus       176 lv~e~~-~-~~L~  186 (429)
T 3kvw_A          176 MTFELL-S-MNLY  186 (429)
T ss_dssp             EEECCC-C-CBHH
T ss_pred             EEEecc-C-CCHH
Confidence            999999 5 4554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.56  E-value=3.6e-08  Score=96.09  Aligned_cols=84  Identities=21%  Similarity=0.262  Sum_probs=68.3

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC--------CCCccceEeEEE---
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ--------HRNLVRLLGFCL---  411 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~---  411 (437)
                      .++|.+.++||+|+||.||++.. .+++.||||++... ....+.+.+|+.+++.++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            35688899999999999999985 45889999999643 233467889999999885        788999999987   


Q ss_pred             -eCCEeEEEEecccCCCcc
Q 013711          412 -EGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       412 -~~~~~~lv~E~~~~~gsL  429 (437)
                       .....+|||||+ .++.+
T Consensus       115 ~~~~~~~lv~e~~-~~~l~  132 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLL  132 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHH
T ss_pred             CCCceEEEEEecc-CccHH
Confidence             456799999999 55444

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.56  E-value=6.3e-08  Score=90.19  Aligned_cols=85  Identities=18%  Similarity=0.125  Sum_probs=64.4

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCc------------------cCHHHHHHHHHHHhcCCCCCc
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG------------------QGAEEFKNEVVLVAKLQHRNL  403 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~------------------~~~~~~~~E~~~l~~l~H~ni  403 (437)
                      .....+...+.||+|+||.||++...+|+.||+|.++....                  .....+.+|+.+|.+++  | 
T Consensus        87 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-  163 (282)
T 1zar_A           87 RSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-  163 (282)
T ss_dssp             HTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-
T ss_pred             hCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-
Confidence            33444566789999999999999987799999999964221                  12356899999999999  4 


Q ss_pred             cceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          404 VRLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       404 v~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      +++.+++. .+..++||||+ ++|+|.-
T Consensus       164 ~~v~~~~~-~~~~~lvmE~~-~g~~L~~  189 (282)
T 1zar_A          164 LAVPKVYA-WEGNAVLMELI-DAKELYR  189 (282)
T ss_dssp             SSSCCEEE-EETTEEEEECC-CCEEGGG
T ss_pred             CCcCeEEe-ccceEEEEEec-CCCcHHH
Confidence            55555443 35579999999 9999865

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.55  E-value=2.9e-08  Score=94.14  Aligned_cols=88  Identities=26%  Similarity=0.470  Sum_probs=71.7

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc------CHHHHHHHHHHHhcCC--CCCccceEeEEEe
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ------GAEEFKNEVVLVAKLQ--HRNLVRLLGFCLE  412 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~g~~~~  412 (437)
                      ...++|...+.||+|+||.||++.. .+++.||||.+......      ..+.+.+|+.++.+++  |+||+++++++..
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            3456788899999999999999985 46889999998653221      2245778999999995  5999999999999


Q ss_pred             CCEeEEEEecccCC-Cccc
Q 013711          413 GEEKILVYEFTLKN-KDNW  430 (437)
Q Consensus       413 ~~~~~lv~E~~~~~-gsL~  430 (437)
                      .+..++|+|++ .+ ++|.
T Consensus       120 ~~~~~lv~e~~-~~~~~L~  137 (320)
T 3a99_A          120 PDSFVLILERP-EPVQDLF  137 (320)
T ss_dssp             SSEEEEEEECC-SSEEEHH
T ss_pred             CCcEEEEEEcC-CCCccHH
Confidence            99999999999 54 6664

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.54  E-value=5.5e-08  Score=92.49  Aligned_cols=84  Identities=21%  Similarity=0.428  Sum_probs=68.8

Q ss_pred             cccccccCccccccceeEEEEEe--CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCC------CccceEeEEEeCCE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHR------NLVRLLGFCLEGEE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~--~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~------niv~l~g~~~~~~~  415 (437)
                      .++|.+.+.||+|+||.||++..  .+++.||||+++... ...+.+.+|+.++..++|+      +++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35688889999999999999986  357899999986432 3346788999999888665      49999999999999


Q ss_pred             eEEEEecccCCCccc
Q 013711          416 KILVYEFTLKNKDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~  430 (437)
                      .++||||+  +++|.
T Consensus        92 ~~lv~e~~--~~~l~  104 (339)
T 1z57_A           92 ICIVFELL--GLSTY  104 (339)
T ss_dssp             EEEEEECC--CCBHH
T ss_pred             EEEEEcCC--CCCHH
Confidence            99999999  45554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.52  E-value=7.6e-08  Score=93.26  Aligned_cols=84  Identities=12%  Similarity=0.018  Sum_probs=55.2

Q ss_pred             cccccccCccccccceeEEEEEeC-CCCEEEEEEccccCc---cCHHHHHHHH---HHHhcCCCCCccceE-------eE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG---QGAEEFKNEV---VLVAKLQHRNLVRLL-------GF  409 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~-------g~  409 (437)
                      ...|...+.||+|+||.||++... +++.||||++.....   ...+.+.+|+   .+|+. +||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            445788899999999999999964 688999999976432   2345677885   45555 799987754       44


Q ss_pred             EEeC-----------------CEeEEEEecccCCCccc
Q 013711          410 CLEG-----------------EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       410 ~~~~-----------------~~~~lv~E~~~~~gsL~  430 (437)
                      +...                 ...+|||||+ + |+|.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~-~~L~  175 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAA-S-VDLE  175 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCC-S-EEHH
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCC-C-CCHH
Confidence            4332                 3489999999 6 7875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.48  E-value=2.9e-07  Score=85.79  Aligned_cols=83  Identities=23%  Similarity=0.430  Sum_probs=67.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEE-EeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC-LEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++.. .+++.||+|.+.....  .+.+.+|+.++..++|++++..+..+ ...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            35688899999999999999995 5789999999865432  34689999999999988877666555 56778899999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+  +++|.
T Consensus        86 ~~--~~~L~   92 (296)
T 3uzp_A           86 LL--GPSLE   92 (296)
T ss_dssp             CC--CCBHH
T ss_pred             ec--CCCHH
Confidence            99  56664

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.44  E-value=1.7e-07  Score=91.19  Aligned_cols=87  Identities=22%  Similarity=0.316  Sum_probs=69.7

Q ss_pred             HhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CC-----CccceEeEEEeC
Q 013711          341 EVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HR-----NLVRLLGFCLEG  413 (437)
Q Consensus       341 ~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g~~~~~  413 (437)
                      ....++|...+.||+|+||.||++... +++.||||+++.. ....+++.+|+.++..++ |+     +|+++.+++...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            334567888999999999999999864 5789999999643 223456788888888874 55     499999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..+|||||+ ++ +|+
T Consensus       129 ~~~~lv~e~~-~~-~L~  143 (382)
T 2vx3_A          129 NHLCLVFEML-SY-NLY  143 (382)
T ss_dssp             TEEEEEEECC-CC-BHH
T ss_pred             CceEEEEecC-CC-CHH
Confidence            9999999999 54 654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.42  E-value=6.2e-07  Score=89.96  Aligned_cols=83  Identities=27%  Similarity=0.402  Sum_probs=66.8

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCC-CCccceEeEEEeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E  421 (437)
                      .++|.+.++||+|+||.||++.. .+++.||||++.....  .+++.+|++++..++| ++|..+..+....+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            35688899999999999999986 5689999998764332  2358899999999976 556666677777889999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+  +++|.
T Consensus        84 ~~--g~sL~   90 (483)
T 3sv0_A           84 LL--GPSLE   90 (483)
T ss_dssp             CC--CCBHH
T ss_pred             CC--CCCHH
Confidence            99  66664

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.42  E-value=3.6e-07  Score=85.15  Aligned_cols=83  Identities=23%  Similarity=0.430  Sum_probs=63.9

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEE-EeCCEeEEEEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFC-LEGEEKILVYE  421 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E  421 (437)
                      .++|...+.||+|+||.||++.. .+++.||||.+.....  .+.+.+|+.++..++|+|++..+..+ ...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            45788899999999999999985 5688999998754322  23588999999999888877766655 56778999999


Q ss_pred             cccCCCccc
Q 013711          422 FTLKNKDNW  430 (437)
Q Consensus       422 ~~~~~gsL~  430 (437)
                      |+  +++|.
T Consensus        86 ~~--~~~L~   92 (296)
T 4hgt_A           86 LL--GPSLE   92 (296)
T ss_dssp             CC--CCBHH
T ss_pred             cc--CCCHH
Confidence            99  66664

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.41  E-value=1.3e-07  Score=91.30  Aligned_cols=84  Identities=18%  Similarity=0.290  Sum_probs=68.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-----------CCCccceEeEEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-----------HRNLVRLLGFCL  411 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~  411 (437)
                      .++|.+.+.||+|+||.||++.. .+++.||||.+... ....+.+.+|+.++.+++           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35688889999999999999986 46889999998642 223467889999998876           899999999988


Q ss_pred             eCC----EeEEEEecccCCCccc
Q 013711          412 EGE----EKILVYEFTLKNKDNW  430 (437)
Q Consensus       412 ~~~----~~~lv~E~~~~~gsL~  430 (437)
                      ..+    ..++||||+  +++|.
T Consensus        97 ~~~~~~~~~~lv~e~~--~~~L~  117 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL--GENLL  117 (373)
T ss_dssp             EEETTEEEEEEEECCC--CEEHH
T ss_pred             ccCCCCceEEEEEecC--CCCHH
Confidence            654    789999999  55554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.36  E-value=3.1e-07  Score=87.91  Aligned_cols=84  Identities=19%  Similarity=0.343  Sum_probs=68.5

Q ss_pred             cccccccCccccccceeEEEEEeC-CC-CEEEEEEccccCccCHHHHHHHHHHHhcCCCCC------ccceEeEEEeCCE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP-SG-QEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN------LVRLLGFCLEGEE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~-~~-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~  415 (437)
                      .++|.+.+.||+|+||.||++... ++ ..||+|+++.. ....+.+.+|+.++++++|+|      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            357888999999999999999863 34 68999999643 233467888999999887665      8999999999999


Q ss_pred             eEEEEecccCCCcc
Q 013711          416 KILVYEFTLKNKDN  429 (437)
Q Consensus       416 ~~lv~E~~~~~gsL  429 (437)
                      .+|||||+ .++.+
T Consensus        97 ~~lv~e~~-~~~l~  109 (355)
T 2eu9_A           97 MCIAFELL-GKNTF  109 (355)
T ss_dssp             EEEEEECC-CCBHH
T ss_pred             EEEEEecc-CCChH
Confidence            99999999 65544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.16  E-value=1.1e-06  Score=90.05  Aligned_cols=79  Identities=13%  Similarity=-0.034  Sum_probs=56.0

Q ss_pred             cccccceeEEEEE-eCCCCEEEEEEccccC----------ccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEE
Q 013711          353 LGEGGFGEVYKGV-LPSGQEIAVKRLSKAS----------GQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       353 lG~G~fg~Vy~g~-~~~~~~vAvK~l~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      .+.|..|.+.+.. .--|+.+++|.+....          ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            4455555444332 2247889999986421          12346799999999999 7999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ +|++|.=+
T Consensus       322 Eyv-~G~~L~d~  332 (569)
T 4azs_A          322 EKL-PGRLLSDM  332 (569)
T ss_dssp             ECC-CSEEHHHH
T ss_pred             ecC-CCCcHHHH
Confidence            999 99998643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.96  E-value=4.1e-06  Score=76.72  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             ccccCccccccceeEEEEEe-CCCCE--EEEEEccccCcc------------------------CHHHHHHHHHHHhcCC
Q 013711          347 FSTDNKLGEGGFGEVYKGVL-PSGQE--IAVKRLSKASGQ------------------------GAEEFKNEVVLVAKLQ  399 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~-~~~~~--vAvK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  399 (437)
                      +...+.||+|+||.||++.. .+|+.  ||||+++.....                        ....+.+|+.+|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999997 67888  999987532110                        0136889999999998


Q ss_pred             CCCc--cceEeEEEeCCEeEEEEecc
Q 013711          400 HRNL--VRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       400 H~ni--v~l~g~~~~~~~~~lv~E~~  423 (437)
                      |+++  +.++..    ...+|||||+
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~  150 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFI  150 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEec
Confidence            8764  344432    3568999999

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.72  E-value=7.7e-06  Score=78.93  Aligned_cols=82  Identities=10%  Similarity=0.122  Sum_probs=53.0

Q ss_pred             ccccCccccccceeEEEEEeCCCCEEEEEEccccC--------------ccCHHHH--------HHHHHHHhcCCCCCcc
Q 013711          347 FSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--------------GQGAEEF--------KNEVVLVAKLQHRNLV  404 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--------------~~~~~~~--------~~E~~~l~~l~H~niv  404 (437)
                      +.+...||+|+||.||++...+|+.||||+++...              .......        .+|...|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            67788999999999999998889999999875321              0111122        3456666666444332


Q ss_pred             ceEeEEEeCCEeEEEEecccCCCcccc
Q 013711          405 RLLGFCLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       405 ~l~g~~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      -..-+..  ...+|||||+ +|+.|.-
T Consensus       177 vp~p~~~--~~~~LVME~i-~G~~L~~  200 (397)
T 4gyi_A          177 VPEPIAQ--SRHTIVMSLV-DALPMRQ  200 (397)
T ss_dssp             CCCEEEE--ETTEEEEECC-SCEEGGG
T ss_pred             CCeeeec--cCceEEEEec-CCccHhh
Confidence            2111111  2247999999 8887753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.69  E-value=2.8e-05  Score=76.27  Aligned_cols=59  Identities=14%  Similarity=0.133  Sum_probs=47.0

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccC---ccCHHHHHHHHHHHhcCCC
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQH  400 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H  400 (437)
                      .....|...+.||+|+||.||++.. .+|+.||||++....   ....+.|.+|+.++..++|
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3445677888999999999999995 568999999987432   2335789999999999987

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.24  E-value=0.00059  Score=62.07  Aligned_cols=84  Identities=13%  Similarity=0.019  Sum_probs=66.1

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .++.....++.|+.+.||+... .+..+++|..+.........+.+|..+++.+ .|.++.+++++....+..++||||+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            4566666778888889999986 4688999998653222334688999999988 4677889999998888999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       +|.+|.
T Consensus        93 -~G~~l~   98 (263)
T 3tm0_A           93 -DGVLCS   98 (263)
T ss_dssp             -SSEEHH
T ss_pred             -CCeehh
Confidence             887764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.76  E-value=0.0017  Score=58.63  Aligned_cols=73  Identities=14%  Similarity=0.070  Sum_probs=56.3

Q ss_pred             ccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCC--ccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          354 GEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       354 G~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      +.|..+.||+....+|..+++|.....   ....+.+|+.+++.+.+.+  +.+++++...++..++||||+ +|.+|.
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i-~G~~l~  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV-PGQDLL  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC-SSEETT
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec-CCcccC
Confidence            455668999998777788999987543   2245788999998885434  556888887777889999999 988874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=93.93  E-value=0.11  Score=47.53  Aligned_cols=78  Identities=17%  Similarity=0.269  Sum_probs=56.2

Q ss_pred             cccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-C--CCccceEeEEEeCCEeEEEEec
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-H--RNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      .+...+.+|.|..+.||+..+.+|+.+.+|+-+.........|..|.+.|+.|. .  --+.+.++.  .  .-++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence            344567789999999999999999999999876544444456888999888773 2  234455543  2  34789999


Q ss_pred             ccCCCc
Q 013711          423 TLKNKD  428 (437)
Q Consensus       423 ~~~~gs  428 (437)
                      + +++.
T Consensus        92 l-~~~~   96 (288)
T 3f7w_A           92 V-DERP   96 (288)
T ss_dssp             C-CCCC
T ss_pred             e-cccC
Confidence            9 6554

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=93.89  E-value=0.05  Score=51.68  Aligned_cols=78  Identities=17%  Similarity=0.292  Sum_probs=55.2

Q ss_pred             cCccccccceeEEEEEeCCCCEEEEEEcc--ccC-ccCHHHHHHHHHHHhcCC--CCCccceEeEEEeC---CEeEEEEe
Q 013711          350 DNKLGEGGFGEVYKGVLPSGQEIAVKRLS--KAS-GQGAEEFKNEVVLVAKLQ--HRNLVRLLGFCLEG---EEKILVYE  421 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~E  421 (437)
                      .+.++.|.++.+|+.... +..+++|+..  ... ......+.+|..+++.+.  +.++.++++.+.+.   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            456889999999999874 4678888775  322 122356888999999886  45678888888765   34899999


Q ss_pred             cccCCCcc
Q 013711          422 FTLKNKDN  429 (437)
Q Consensus       422 ~~~~~gsL  429 (437)
                      |+ +|..+
T Consensus       122 ~v-~G~~l  128 (359)
T 3dxp_A          122 FV-SGRVL  128 (359)
T ss_dssp             CC-CCBCC
T ss_pred             ec-CCeec
Confidence            99 88766

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.29  E-value=0.37  Score=44.76  Aligned_cols=76  Identities=21%  Similarity=0.173  Sum_probs=59.3

Q ss_pred             ccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC---CCCccceEeEEEeCCEeEEEEecccC
Q 013711          349 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ---HRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ..+.|+.|....+|+... ++..+.+|+....   ....+..|.+.|+.|.   ...+.+++++....+..++||||+ +
T Consensus        40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l-~  114 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL-N  114 (312)
T ss_dssp             EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC-C
T ss_pred             eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec-c
Confidence            345788999999999886 5677888886532   2567889998888873   356888888888778899999999 8


Q ss_pred             CCcc
Q 013711          426 NKDN  429 (437)
Q Consensus       426 ~gsL  429 (437)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=90.52  E-value=0.27  Score=47.26  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             cCccccccceeEEEEEeC-CCCEEEEEEccccCc-------cCHHHHHHHHHHHhcCC-C-CC-ccceEeEEEeCCEeEE
Q 013711          350 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASG-------QGAEEFKNEVVLVAKLQ-H-RN-LVRLLGFCLEGEEKIL  418 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~-------~~~~~~~~E~~~l~~l~-H-~n-iv~l~g~~~~~~~~~l  418 (437)
                      .+.+|.|..+.||++... ++..++||.......       ...+.+..|.+++..+. + +. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            356899999999999764 467899998653211       12345678888888763 2 33 3455543  4555789


Q ss_pred             EEecccCCCc
Q 013711          419 VYEFTLKNKD  428 (437)
Q Consensus       419 v~E~~~~~gs  428 (437)
                      ||||+ ++..
T Consensus       113 vmE~l-~g~~  121 (397)
T 2olc_A          113 VMEDL-SHLK  121 (397)
T ss_dssp             EECCC-TTSE
T ss_pred             EEEeC-CCcc
Confidence            99999 7643

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=89.66  E-value=0.11  Score=32.66  Aligned_cols=6  Identities=17%  Similarity=0.241  Sum_probs=2.2

Q ss_pred             HHHHHH
Q 013711          293 IAVTAV  298 (437)
Q Consensus       293 ~~~~~l  298 (437)
                      ++++++
T Consensus        21 v~~~~i   26 (44)
T 2ks1_B           21 LLLLLV   26 (44)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            333333

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=88.55  E-value=0.97  Score=40.45  Aligned_cols=73  Identities=18%  Similarity=0.159  Sum_probs=53.2

Q ss_pred             cccccce-eEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEeCCEeEEEEecccCCCcc
Q 013711          353 LGEGGFG-EVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       353 lG~G~fg-~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      +..|..+ .||+.... ++..+.+|+-+..   ...++.+|..+|+.+. +--+.++++++.+.+..++|||++ +|.++
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l-~G~~~  107 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI-PGKTA  107 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC-CSEEH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee-CCccc
Confidence            3445444 58887754 4567888876432   2456888999988873 445778899999999999999999 87654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=88.29  E-value=0.072  Score=52.63  Aligned_cols=61  Identities=8%  Similarity=0.088  Sum_probs=18.3

Q ss_pred             ccCccccccceeEEEEEeCC-CCEEEE------EEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe
Q 013711          349 TDNKLGEGGFGEVYKGVLPS-GQEIAV------KRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE  412 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~-~~~vAv------K~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  412 (437)
                      ..+.+|   ||.||+|.+.. ..+|||      |..+..  +.+....|.+|..++..++|+|+++..++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            345666   99999999854 367888      766542  22334578999999999999999999887654

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=83.64  E-value=0.15  Score=31.85  Aligned_cols=7  Identities=43%  Similarity=0.487  Sum_probs=3.3

Q ss_pred             eeeehhh
Q 013711          286 IIAIVAP  292 (437)
Q Consensus       286 ii~ivv~  292 (437)
                      +++.+++
T Consensus        14 Ia~~vVG   20 (44)
T 2jwa_A           14 IISAVVG   20 (44)
T ss_dssp             HHHHHHH
T ss_pred             hHHHHHH
Confidence            4444444

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=83.26  E-value=0.21  Score=30.28  Aligned_cols=19  Identities=21%  Similarity=0.436  Sum_probs=9.5

Q ss_pred             CCcceeeehhhHHHHHHHH
Q 013711          282 SSSTIIAIVAPIAVTAVLF  300 (437)
Q Consensus       282 ~~~vii~ivv~~~~~~l~l  300 (437)
                      +...+.+++++.++.+.++
T Consensus         9 s~GaIAGiVvG~v~gv~li   27 (38)
T 2k1k_A            9 TGGEIVAVIFGLLLGAALL   27 (38)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceeeeehHHHHHHHHH
Confidence            3444556666555444333

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=83.09  E-value=0.66  Score=43.64  Aligned_cols=79  Identities=8%  Similarity=0.008  Sum_probs=53.5

Q ss_pred             Ccc-ccccceeEEEEEeC-------CCCEEEEEEccccC---ccCHHHHHHHHHHHhcCC-C--CCccceEeEEEeC---
Q 013711          351 NKL-GEGGFGEVYKGVLP-------SGQEIAVKRLSKAS---GQGAEEFKNEVVLVAKLQ-H--RNLVRLLGFCLEG---  413 (437)
Q Consensus       351 ~~l-G~G~fg~Vy~g~~~-------~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~---  413 (437)
                      +.| +.|....+|+....       ++..+.+|......   ......+.+|..+++.|. |  -.+.++++.+.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 77888899988764       25678888765432   111245788888888773 3  3567788776654   


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      ...++||||+ +|..+.
T Consensus       106 g~~~~v~e~l-~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYV-EGVVPP  121 (357)
T ss_dssp             SSCEEEEECC-CCBCCC
T ss_pred             CCceEEEEec-CCCChh
Confidence            3468999999 876653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	437
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-22
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-21
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-21
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-20
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-20
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-19
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-18
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-17
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-16
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-16
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-14
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-14
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-13
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-11

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 7e-24
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           ++ +   ++G G FG V+ G   +  ++A+K + +      E+F  E  ++ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 405 RLLGFCLEGEEKILVYEF 422
           +L G CLE     LV+EF
Sbjct: 64  QLYGVCLEQAPICLVFEF 81

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 2e-23
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           EV         +LG G FGEV+ G      ++AVK L + S    + F  E  L+ +LQH
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
           + LVRL     + E   ++ E+
Sbjct: 68  QRLVRLYAVVTQ-EPIYIITEY 88

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 5e-23
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
              +   +LG G FG V  G      ++A+K + + S    +EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 405 RLLGFCLEGEEKILVYEF 422
           +L G C +     ++ E+
Sbjct: 63  QLYGVCTKQRPIFIITEY 80

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.4 bits (234), Expect = 2e-22
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 330 LESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEF 388
           ++    +++  E+     +  +KLG G +GEVY+GV       +AVK L + + +  EEF
Sbjct: 2   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEF 60

Query: 389 KNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
             E  ++ +++H NLV+LLG C       ++ EF
Sbjct: 61  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 8e-22
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 340 IEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA-EEFKNEVVLVAK 397
           +E+  + F   ++LG G  G V+K    PSG  +A K +          +   E+ ++ +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
                +V   G      E  +  E 
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEH 85

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 1e-21
 Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 325 NDLTTLESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQ 383
           +D   LE L+    ++     K++   K+G+G  G VY  + + +GQE+A+++++     
Sbjct: 1   SDEEILEKLR-SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59

Query: 384 GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
             E   NE++++ + ++ N+V  L   L G+E  +V E+
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 5e-21
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)

Query: 325 NDLTTLESLQFDFETI-EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRL 377
           N+   ++  Q  ++   E   N+ S    LG G FG+V +          +   +AVK L
Sbjct: 2   NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61

Query: 378 SKASGQG-AEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
             ++     E   +E+ +++ L  H N+V LLG C  G   +++ E+
Sbjct: 62  KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 108

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 90.8 bits (225), Expect = 5e-21
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAE---EFKNEVVLVAKLQ 399
              FS   ++G G FG VY    + + + +A+K++S +  Q  E   +   EV  + KL+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H N ++  G  L      LV E+
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEY 96

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 8e-21
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
            +   +      +G+G FG+V  G    G ++AVK +   +    + F  E  ++ +L+H
Sbjct: 3   ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 59

Query: 401 RNLVRLLGFCLEGEEKI-LVYEF 422
            NLV+LLG  +E +  + +V E+
Sbjct: 60  SNLVQLLGVIVEEKGGLYIVTEY 82

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 1e-20
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 340 IEVATNKFS-TDNKLGEGGFGEVYKGVL---PSGQEIAVKRLSKASGQG-AEEFKNEVVL 394
           + +  +     D +LG G FG V +GV        ++A+K L + + +   EE   E  +
Sbjct: 3   LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 62

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +L +  +VRL+G C + E  +LV E 
Sbjct: 63  MHQLDNPYIVRLIGVC-QAEALMLVMEM 89

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 2e-20
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+       + KLG+G FGEV+ G       +A+K L   +    E F  E  ++ KL+H
Sbjct: 13  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRH 71

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
             LV+L       E   +V E+
Sbjct: 72  EKLVQLYAVV-SEEPIYIVTEY 92

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 2e-20
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH 400
           E+   + +   ++G G FG VYKG       + +  ++  + Q  + FKNEV ++ K +H
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
            N++  +G+     +  +V ++
Sbjct: 64  VNILLFMGYS-TAPQLAIVTQW 84

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.7 bits (219), Expect = 2e-20
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 14/102 (13%)

Query: 335 FDFETIEVATNKFST---------DNKLGEGGFGEVYKGVLPSGQE----IAVKRLSKA- 380
           F FE    A  +F+          +  +G G FGEV  G L    +    +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 381 SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + +   +F +E  ++ +  H N++ L G   +    +++ EF
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF 108

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.6 bits (216), Expect = 6e-20
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 333 LQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSK-ASGQGA 385
           L     ++E   N       +GEG FG V++   P          +AVK L + AS    
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 386 EEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +F+ E  L+A+  + N+V+LLG C  G+   L++E+
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 97

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 1e-19
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQE-----IAVKRLSKASGQGA-EEFKNEV 392
           T E+  +  +    +G G FGEVYKG+L +        +A+K L     +    +F  E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            ++ +  H N++RL G   + +  +++ E+
Sbjct: 61  GIMGQFSHHNIIRLEGVISKYKPMMIITEY 90

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 87.4 bits (216), Expect = 1e-19
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNL 403
           + +    +LG G FG V++     +G   A K +        E  + E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 404 VRLLGFCLEGEEKILVYEF 422
           V L     +  E +++YEF
Sbjct: 86  VNLHDAFEDDNEMVMIYEF 104

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 1e-19
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 350 DNKLGEGGFGEVYKGVLP---SGQEIAVKRLSKASGQGA--EEFKNEVVLVAKLQHRNLV 404
           D +LG G FG V KG        + +AVK L   +   A  +E   E  ++ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 405 RLLGFCLEGEEKILVYEF 422
           R++G C E E  +LV E 
Sbjct: 72  RMIGIC-EAESWMLVMEM 88

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 1e-19
 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 321 SNADNDLTTLESLQFDFETI-EVATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIA 373
            ++DN+   ++  +++++   E           LG G FG+V               ++A
Sbjct: 12  GSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVA 71

Query: 374 VKRLSKASGQGA-EEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           VK L + +     E   +E+ ++ +L  H N+V LLG C       L++E+
Sbjct: 72  VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 122

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 2e-19
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 326 DLTTLES-LQFDFETIEVATNKFST--DNKLGEGGFGEVYKGVLP----SGQEIAVKRLS 378
           DL+ L   L    + + +  +      +  +G G FG VY G L          AVK L+
Sbjct: 5   DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 64

Query: 379 KASGQG-AEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEF 422
           + +  G   +F  E +++    H N++ LLG CL  E    +V  +
Sbjct: 65  RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 3e-19
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 337 FETIEVATN---KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEV 392
           +E +    N    +    +LG+G FG+VYK     +    A K +   S +  E++  E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
            ++A   H N+V+LL          ++ EF
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEF 90

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 4e-19
 Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQG-AEEFKNEVVLVAKLQHR 401
             +++  + +GEG +G V       +   +A+K++S    Q   +    E+ ++ + +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 402 NLVRLLGFCLEGEEKILVYEF 422
           N++ +         + +   +
Sbjct: 67  NIIGINDIIRAPTIEQMKDVY 87

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 85.9 bits (212), Expect = 5e-19
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNL 403
           + +    +LG G FG V++ V   +G+    K ++          KNE+ ++ +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 404 VRLLGFCLEGEEKILVYEF 422
           + L     +  E +L+ EF
Sbjct: 89  INLHDAFEDKYEMVLILEF 107

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 5e-19
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSK-ASGQGAEEFKNEVV 393
           EVA  K +   +LG+G FG VY+GV            +A+K +++ AS +   EF NE  
Sbjct: 16  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 75

Query: 394 LVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           ++ +    ++VRLLG   +G+  +++ E 
Sbjct: 76  VMKEFNCHHVVRLLGVVSQGQPTLVIMEL 104

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.3 bits (208), Expect = 7e-19
 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 337 FETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-FKNEVVL 394
           ++  E   + +   + LG G F EV       + + +A+K ++K + +G E   +NE+ +
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 395 VAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           + K++H N+V L      G    L+ + 
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQL 88

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 1e-18
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA-EEFKNEVVLVAKLQHRN 402
             +     LGEG +GEV   V   + + +AVK +         E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 403 LVRLLGFCLEGEEKILVYEF 422
           +V+  G   EG  + L  E+
Sbjct: 65  VVKFYGHRREGNIQYLFLEY 84

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 1e-18
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSK---ASGQGAEEFKNE 391
           T  +         KLG+G FG V +G   +       +AVK L     +  +  ++F  E
Sbjct: 2   TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 392 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 422
           V  +  L HRNL+RL G  L    K+ V E 
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 91

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 82.6 bits (203), Expect = 2e-18
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRN 402
            K+    K+GEG +G VYK     G+  A+K  RL K           E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 403 LVRLLGFCLEGEEKILVYEFTLKNKDNWI 431
           +V+L       +  +LV+E   ++    +
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLL 90

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 6e-18
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKASGQGA-EEFKNEVVLV 395
           E+   +      +GEG FG+V++G+  S       +A+K     +     E+F  E + +
Sbjct: 3   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62

Query: 396 AKLQHRNLVRLLGFCLEGEEKILVYEF 422
            +  H ++V+L+G   E     ++ E 
Sbjct: 63  RQFDHPHIVKLIGVITEN-PVWIIMEL 88

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 3e-17
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHR 401
            F     LGEG F  V     L + +E A+K L K              E  ++++L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 402 NLVRLLGFCLEGEEKILVYEF 422
             V+L     + E+      +
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSY 89

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 5e-17
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 352 KLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCL 411
            +G+G FGEV++G    G+E+AVK  S    + +   + E+     L+H N++  +    
Sbjct: 10  SIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADN 67

Query: 412 EGEEKI----LVYEF 422
           +         LV ++
Sbjct: 68  KDNGTWTQLWLVSDY 82

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 5e-17
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSK-ASGQGAEEFKNEVVLVAKL-Q 399
           N     + +GEG FG+V K  +       + A+KR+ + AS     +F  E+ ++ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H N++ LLG C       L  E+
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEY 92

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 6e-17
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 347 FSTDNKLGEGGFGEVYKGV-LPSGQE----IAVKRLSKA-SGQGAEEFKNEVVLVAKLQH 400
           F     LG G FG VYKG+ +P G++    +A+K L +A S +  +E  +E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
            ++ RLLG CL    +++    
Sbjct: 71  PHVCRLLGICLTSTVQLITQLM 92

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.9 bits (191), Expect = 9e-17
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 344 TNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA---EEFKNEVVLVAKLQ 399
           ++++     LG GG  EV+    L   +++AVK L     +       F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 400 HRNLVRLLGFCLE----GEEKILVYEF 422
           H  +V +          G    +V E+
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEY 92

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 9e-17
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKAS------GQGAEEFKNEVVLVAK 397
           + + T  +LG G F  V K     +G + A K + K        G   E+ + EV ++ +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
           +QH N++ L        + IL+ E 
Sbjct: 70  IQHPNVITLHEVYENKTDVILILEL 94

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 79.0 bits (194), Expect = 9e-17
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVV---LVAK 397
           N FS    +G GGFGEVY      +G+  A+K L K      QG     NE +   LV+ 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
                +V +       ++   + + 
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDL 88

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 9e-17
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 346 KFSTDN-----KLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGA---EEFKNEVVLVA 396
           +++ ++      LG+G FG VY      S   +A+K L KA  + A    + + EV + +
Sbjct: 2   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 61

Query: 397 KLQHRNLVRLLGFCLEGEEKILVYEF 422
            L+H N++RL G+  +     L+ E+
Sbjct: 62  HLRHPNILRLYGYFHDATRVYLILEY 87

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 1e-16
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 350 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHRNLVRL 406
           D ++G G F  VYKG+   +  E+A   L     +    + FK E  ++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 407 LGFCLEGEEK----ILVYEF 422
                   +     +LV E 
Sbjct: 74  YDSWESTVKGKKCIVLVTEL 93

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.8 bits (191), Expect = 2e-16
 Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSK---ASGQGAEEFKNEVVLVAKLQH 400
             F     LG G FG V+      +G+  A+K L K      +  E   +E ++++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 401 RNLVRLLGFCLEGEEKILVYEF 422
             ++R+ G   + ++  ++ ++
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDY 85

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 2e-16
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 351 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE-----FKNEVVLVAKLQHRNLV 404
           + LGEG F  VYK     + Q +A+K++       A++        E+ L+ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 405 RLLGFCLEGEEKILVYEF 422
            LL          LV++F
Sbjct: 64  GLLDAFGHKSNISLVFDF 81

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 3e-16
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK--RLSKASGQGAEEFKNEVVLVAKLQHRN 402
            F    K+GEG +G VYK     +G+ +A+K  RL   +         E+ L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 403 LVRLLGFCLEGEEKILVYEFTLKNKDNWI 431
           +V+LL       +  LV+EF  ++   ++
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFM 91

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 3e-16
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLV 404
           K+     LG G FG V++ V   S +    K + K  G      K E+ ++   +HRN++
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNIL 64

Query: 405 RLLGFCLEGEEKILVYEF 422
            L       EE ++++EF
Sbjct: 65  HLHESFESMEELVMIFEF 82

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.0 bits (186), Expect = 5e-16
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNL 403
           N++    K+G G FG++Y G  + +G+E+A+K     +     +   E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 404 VRLLGFCL-EGEEKILVYEF 422
           +  + +C  EG+  ++V E 
Sbjct: 65  IPTIRWCGAEGDYNVMVMEL 84

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 7e-16
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 347 FSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVR 405
           ++    +G G FG VY+  L  SG+ +A+K++ +           E+ ++ KL H N+VR
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77

Query: 406 LLGFCLEGEEK------ILVYEF 422
           L  F     EK       LV ++
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDY 100

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 8e-16
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSK--ASGQGAEEFKNEVVLVAKLQHR 401
             +     +G G +G V   V   +G ++A+K+L +   S   A+    E+ L+  ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 402 NLVRLLGFCLEGEEKILVYEFTL 424
           N++ LL      E      +F L
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYL 100

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 8e-16
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 15/92 (16%)

Query: 336 DFETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA--EEFKNEV 392
           D+E +            +G G +G   K      G+ +  K L   S   A  +   +EV
Sbjct: 5   DYEVLY----------TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEV 54

Query: 393 VLVAKLQHRNLVRLLGFCLEGEEKI--LVYEF 422
            L+ +L+H N+VR     ++       +V E+
Sbjct: 55  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 86

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 3e-15
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 341 EVATNKFSTDNKLGEGGFGEVYKGVLPS--------GQEIAVKRLSK-ASGQGAEEFKNE 391
           E+  ++      LGEG FG+V                 ++AVK L   A+ +   +  +E
Sbjct: 9   ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68

Query: 392 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEF 422
           + ++  + +H+N++ LLG C +     ++ E+
Sbjct: 69  MEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 100

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 7e-15
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 338 ETIEVATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVL 394
           +TI     ++   + +G G +G V       +G  +AVK+LS+   S   A+    E+ L
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70

Query: 395 VAKLQHRNLVRLLGFCLEGE 414
           +  ++H N++ LL       
Sbjct: 71  LKHMKHENVIGLLDVFTPAR 90

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (176), Expect = 8e-15
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHR 401
            K+    K+GEG +G V+K     + + +A+KR+               E+ L+ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 402 NLVRLLGFCLEGEEKILVYEF 422
           N+VRL       ++  LV+EF
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEF 82

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-14
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEE------FKNEVVLVAK 397
           +++     LG GGFG VY G+ +     +A+K + K       E         EVVL+ K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 398 LQ--HRNLVRLLGFCLEGEEKILVYEF 422
           +      ++RLL +    +  +L+ E 
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILER 90

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 71.4 bits (174), Expect = 2e-14
 Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRN- 402
             +    ++GEG FG +++G  L + Q++A+K   + S   A + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTG 62

Query: 403 LVRLLGFCLEGEEKILVYEFTLKNKDNWI 431
           +  +  F  EG   +LV +    + ++ +
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLL 91

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 2e-14
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA--EEFKNEVVLVAKLQHR 401
           +K+    K+G+G FGEV+K     +GQ++A+K++   + +         E+ ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 402 NLVRLLGFCLEGEEKILVYEFTL 424
           N+V L+  C          + ++
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSI 92

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (173), Expect = 2e-14
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 333 LQFDFETIEVATNKFSTDNKLGEGGFGEVYKGV------LPSGQEIAVKRLSKASGQGAE 386
           L +D    E   ++      LG G FG+V +          + + +AVK L + +     
Sbjct: 1   LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 60

Query: 387 E--FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLKNKD 428
                   +L+    H N+V LLG C +    ++V     K  +
Sbjct: 61  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 104

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 3e-14
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 15/102 (14%)

Query: 336 DFETIEVATNKFSTDNK------LGEGGFGEVYKGV-LPSGQEIAVKRLSKA--SGQGAE 386
            F ++EV  + F+   +      +G G  G V         + +A+K+LS+   +   A+
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61

Query: 387 EFKNEVVLVAKLQHRNLVRLLGFCL------EGEEKILVYEF 422
               E+VL+  + H+N++ LL          E ++  LV E 
Sbjct: 62  RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 67.9 bits (165), Expect = 5e-14
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 14/101 (13%)

Query: 351 NKLGEGGFGEVYKGVLPSGQEIAVK--RLSKASGQ--------GAEEFKNEVVLVAKLQH 400
             +GEG    V+        E  VK  ++   S +        G   F    +  A+ + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 401 RNLVRLLGFC----LEGEEKILVYEFTLKNKDNWIGQDVTR 437
           R L +L G         E   ++ E     +   +  +   
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPD 106

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-13
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN----EVVLVAKLQ 399
             F     LG+G FG+V+      + Q  A+K L K      ++ +     + VL    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 400 HRNLVRLLGFCLEGEEKILVYEF 422
           H  L  +       E    V E+
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEY 84

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.5 bits (169), Expect = 1e-13
 Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 335 FDFETIEVAT---NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKN 390
           +D+E+  V     + +    KLG G + EV++ + + + +++ VK L        ++ K 
Sbjct: 22  WDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKR 78

Query: 391 EVVLVAKLQ-HRNLVRLLGFCLEGEEKILVYEF 422
           E+ ++  L+   N++ L     +   +     F
Sbjct: 79  EIKILENLRGGPNIITLADIVKDPVSRTPALVF 111

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 4e-13
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 343 ATNKFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSKASGQG--AEEFKNEVVLVAKL 398
           A  ++    ++GEG +G+V+K   +   G+ +A+KR+   +G+         EV ++  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 399 ---QHRNLVRLLGFCLEGEEKILVYEF 422
              +H N+VRL   C            
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLT 91

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 65.1 bits (158), Expect = 2e-12
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 346 KFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGA---------EEFKNEVVLV 395
            +     LG G    V + +  P+ +E AVK +    G            E    EV ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 396 AKLQ-HRNLVRLLGFCLEGEEKILVYEF 422
            K+  H N+++L           LV++ 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDL 91

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 2e-12
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 342 VATNKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAK 397
           V  N F     LG+G FG+V       +G+  A+K L K    +         E  ++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 398 LQHRNLVRLLGFCLEGEEKILVYEF 422
            +H  L  L       +    V E+
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEY 86

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.4 bits (158), Expect = 3e-12
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNL 403
            ++    KLG G F  V+    + +   +A+K +        E  ++E+ L+ ++   + 
Sbjct: 13  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADN 71

Query: 404 VRLLGFCLEGEEKILVYEFTLKNKDNWI 431
            +          K+L +          +
Sbjct: 72  TKEDSMGANHILKLLDHFNHKGPNGVHV 99

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 1e-11
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 345 NKFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSK---ASGQGAEEFKNEVVLVAKLQH 400
           ++F     LG G FG V       SG   A+K L K      +  E   NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 401 RNLVRLLGFCLEGEEKILVY 420
             LV+L     +     +V 
Sbjct: 101 PFLVKLEFSFKDNSNLYMVM 120

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 1e-11
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 330 LESLQFDFETIEVATNKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKAS---- 381
           L +        +V    F     LG G +G+V+         +G+  A+K L KA+    
Sbjct: 9   LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK 68

Query: 382 GQGAEEFKNEVVLVAKLQHR-NLVRLLGFCLEGEEKILVYEF 422
            +  E  + E  ++  ++    LV L        +  L+ ++
Sbjct: 69  AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 110

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 2e-11
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 11/80 (13%)

Query: 349 TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRL 406
           T   LG G  G+V +     + ++ A+K L         + + EV L  +  Q  ++VR+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRI 70

Query: 407 LGFCLEGEEK----ILVYEF 422
           +             ++V E 
Sbjct: 71  VDVYENLYAGRKCLLIVMEC 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	437
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.58
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.56
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.56
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.55
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.53
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.52
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.5
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.49
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.48
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.47
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.47
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.46
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.46
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.45
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.45
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.45
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.44
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.43
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.43
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.43
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.42
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.42
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.42
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.41
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.4
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.39
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.38
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.38
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.38
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.37
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.37
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.37
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.34
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.33
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.32
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.32
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.31
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.3
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.3
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.29
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.27
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.27
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.25
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.25
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.22
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.16
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.15
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.15
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.13
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.12
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.1
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.09
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.07
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.07
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.04
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.03
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.87
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.83
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.32
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.25
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.98
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.68

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=8.8e-16  Score=141.92  Aligned_cols=94  Identities=31%  Similarity=0.542  Sum_probs=82.3

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      .+++|++..++|...++||+|+||.||+|... +++.||||.++.. ....++|.+|+.+|++++|||||+++|++.+++
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            44566677788999999999999999999975 5889999999754 345678999999999999999999999999999


Q ss_pred             EeEEEEecccCCCcccc
Q 013711          415 EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l  431 (437)
                      ..+|||||+ ++|+|+-
T Consensus        87 ~~~iv~E~~-~~g~l~~  102 (287)
T d1opja_          87 PFYIITEFM-TYGNLLD  102 (287)
T ss_dssp             SCEEEEECC-TTCBHHH
T ss_pred             eeEEEeecc-cCcchHH
Confidence            999999999 9999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.8e-15  Score=138.79  Aligned_cols=90  Identities=31%  Similarity=0.483  Sum_probs=77.7

Q ss_pred             hhHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          338 ETIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++++++.++|.+.+.||+|+||.||+|.++++..||||+++... ...++|.+|+.+|++++|||||+++|++. .+..+
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~   83 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY   83 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeE
Confidence            34555667888899999999999999999888899999997533 45678999999999999999999999875 45679


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|.
T Consensus        84 iv~Ey~-~~g~L~   95 (272)
T d1qpca_          84 IITEYM-ENGSLV   95 (272)
T ss_dssp             EEEECC-TTCBHH
T ss_pred             EEEEeC-CCCcHH
Confidence            999999 999985

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.1e-15  Score=135.89  Aligned_cols=86  Identities=26%  Similarity=0.412  Sum_probs=77.3

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ++|+..++||+|+||.||+|+++++..||||.++... ...++|.+|+.++++++|||||+++|++.+++..++||||+ 
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~-   81 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-   81 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC-
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc-
Confidence            5788899999999999999999888899999997543 45678999999999999999999999999999999999999 


Q ss_pred             CCCccccc
Q 013711          425 KNKDNWIG  432 (437)
Q Consensus       425 ~~gsL~l~  432 (437)
                      ++|+|.-.
T Consensus        82 ~~g~l~~~   89 (258)
T d1k2pa_          82 ANGCLLNY   89 (258)
T ss_dssp             TTEEHHHH
T ss_pred             CCCcHHHh
Confidence            99987543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.6e-15  Score=136.97  Aligned_cols=85  Identities=29%  Similarity=0.480  Sum_probs=76.7

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEeccc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTL  424 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  424 (437)
                      ++|+..+.||+|+||.||+|.+.+++.||||.++.. ....++|.+|+.++++++|||||+++|++..++..+|||||+ 
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~-   82 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM-   82 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC-
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec-
Confidence            467788999999999999999988889999999753 345678999999999999999999999999999999999999 


Q ss_pred             CCCcccc
Q 013711          425 KNKDNWI  431 (437)
Q Consensus       425 ~~gsL~l  431 (437)
                      ++|+|.-
T Consensus        83 ~~g~L~~   89 (263)
T d1sm2a_          83 EHGCLSD   89 (263)
T ss_dssp             TTCBHHH
T ss_pred             CCCcHHH
Confidence            9999864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.3e-14  Score=134.14  Aligned_cols=87  Identities=25%  Similarity=0.395  Sum_probs=78.3

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|...+.||+|+||.||++.. .+|+.||||+++.......+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4688889999999999999986 468999999997665566788999999999999999999999999999999999999


Q ss_pred             cCCCccccc
Q 013711          424 LKNKDNWIG  432 (437)
Q Consensus       424 ~~~gsL~l~  432 (437)
                       ++|+|+-.
T Consensus       100 -~gg~L~~~  107 (293)
T d1yhwa1         100 -AGGSLTDV  107 (293)
T ss_dssp             -TTCBHHHH
T ss_pred             -CCCcHHHH
Confidence             99998643

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7.3e-15  Score=135.63  Aligned_cols=86  Identities=24%  Similarity=0.348  Sum_probs=77.5

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.|++.+.||+|+||.||++.. .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4578889999999999999986 468999999997766666778999999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       ++|+|.-
T Consensus        92 -~~g~L~~   98 (288)
T d2jfla1          92 -AGGAVDA   98 (288)
T ss_dssp             -TTEEHHH
T ss_pred             -CCCcHHH
Confidence             9999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.9e-15  Score=134.77  Aligned_cols=91  Identities=27%  Similarity=0.408  Sum_probs=77.6

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      ++++..++|.+.+.||+|+||.||+|.++++..||||.++.. ....+.|.+|+.+|.+++|||||+++|++. .++.++
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~l   88 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI   88 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEE
Confidence            344456778899999999999999999988889999999654 345678999999999999999999999985 566899


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      ||||+ ++|+|...
T Consensus        89 v~Ey~-~~g~l~~~  101 (285)
T d1fmka3          89 VTEYM-SKGSLLDF  101 (285)
T ss_dssp             EECCC-TTCBHHHH
T ss_pred             EEEec-CCCchhhh
Confidence            99999 99987643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.2e-14  Score=131.13  Aligned_cols=87  Identities=26%  Similarity=0.411  Sum_probs=73.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|++.+.||+|+||.||++.. .+|+.||||+++... .+..+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4688889999999999999986 468999999996533 23345799999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + ++|+|+-.
T Consensus        85 ~-~gg~L~~~   93 (271)
T d1nvra_          85 C-SGGELFDR   93 (271)
T ss_dssp             C-TTEEGGGG
T ss_pred             c-CCCcHHHH
Confidence            9 99999643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.1e-14  Score=133.49  Aligned_cols=89  Identities=27%  Similarity=0.515  Sum_probs=74.6

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeCCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      +|+...++|.+.+.||+|+||.||+|+++  ..||||+++..  .....+.|.+|+.+|.+++|||||+++|++. .+..
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~   78 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQL   78 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEE
Confidence            34556778899999999999999999874  36999999653  3344578999999999999999999999875 4568


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ ++|+|+-
T Consensus        79 ~lv~Ey~-~~g~L~~   92 (276)
T d1uwha_          79 AIVTQWC-EGSSLYH   92 (276)
T ss_dssp             EEEEECC-CEEEHHH
T ss_pred             EEEEecC-CCCCHHH
Confidence            9999999 9999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4e-14  Score=131.04  Aligned_cols=85  Identities=26%  Similarity=0.424  Sum_probs=75.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC------ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS------GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      +.|.+.+.||+|+||.||++.. .+|+.||||+++...      ....+.+.+|+.+|++++|||||++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            4688889999999999999996 468999999986421      123578999999999999999999999999999999


Q ss_pred             EEEecccCCCccc
Q 013711          418 LVYEFTLKNKDNW  430 (437)
Q Consensus       418 lv~E~~~~~gsL~  430 (437)
                      |||||+ ++|+|+
T Consensus        90 iv~E~~-~gg~L~  101 (293)
T d1jksa_          90 LILELV-AGGELF  101 (293)
T ss_dssp             EEEECC-CSCBHH
T ss_pred             EEEEcC-CCcccc
Confidence            999999 999986

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.5e-14  Score=135.75  Aligned_cols=89  Identities=19%  Similarity=0.202  Sum_probs=77.6

Q ss_pred             hhcccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ...++|+..++||+|+||.||++.. .+|+.||+|.++.... ...+.+.+|+.+|++++|||||++++++.+++..+||
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3456788899999999999999986 4689999999975432 3346799999999999999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|+-
T Consensus        83 mEy~-~gg~L~~   93 (322)
T d1s9ja_          83 MEHM-DGGSLDQ   93 (322)
T ss_dssp             EECC-TTEEHHH
T ss_pred             EEcC-CCCcHHH
Confidence            9999 9999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.47  E-value=3.3e-14  Score=134.81  Aligned_cols=85  Identities=24%  Similarity=0.445  Sum_probs=76.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||.+........+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688889999999999999986 468999999997665555678999999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|+
T Consensus       106 -~gg~L~  111 (350)
T d1koaa2         106 -SGGELF  111 (350)
T ss_dssp             -CSCBHH
T ss_pred             -CCCCHH
Confidence             999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.2e-14  Score=132.10  Aligned_cols=87  Identities=28%  Similarity=0.475  Sum_probs=71.1

Q ss_pred             hcccccccC-ccccccceeEEEEEeC---CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          343 ATNKFSTDN-KLGEGGFGEVYKGVLP---SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       343 ~~~~~~~~~-~lG~G~fg~Vy~g~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ..+++...+ +||+|+||.||+|.+.   ++..||||.++... ....++|.+|+.+|.+++|||||+++|++.. +..+
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEE
Confidence            345566666 4999999999999863   34579999997543 3345789999999999999999999999864 5689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|.-
T Consensus        85 lvmE~~-~~g~L~~   97 (285)
T d1u59a_          85 LVMEMA-GGGPLHK   97 (285)
T ss_dssp             EEEECC-TTEEHHH
T ss_pred             EEEEeC-CCCcHHH
Confidence            999999 9999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.46  E-value=4.7e-14  Score=133.78  Aligned_cols=85  Identities=24%  Similarity=0.381  Sum_probs=76.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      +.|.+.+.||+|+||.||++.. .+|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4588889999999999999986 469999999997655445567899999999999999999999999999999999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|+
T Consensus       109 -~gg~L~  114 (352)
T d1koba_         109 -SGGELF  114 (352)
T ss_dssp             -CCCBHH
T ss_pred             -CCChHH
Confidence             999995

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=2.3e-14  Score=133.08  Aligned_cols=87  Identities=24%  Similarity=0.422  Sum_probs=73.1

Q ss_pred             cccccccCccccccceeEEEEEeCC-C---CEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-G---QEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~---~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|...++||+|+||.||+|.... +   ..||||.+... .....+.|.+|+.+|++++|||||+++|++..++..+|
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            3456777899999999999998742 2   36899998653 33445689999999999999999999999999999999


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ||||+ ++|+|.-
T Consensus       105 v~Ey~-~~g~L~~  116 (299)
T d1jpaa_         105 ITEFM-ENGSLDS  116 (299)
T ss_dssp             EEECC-TTEEHHH
T ss_pred             EEEec-CCCccee
Confidence            99999 9999864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.3e-14  Score=130.33  Aligned_cols=85  Identities=28%  Similarity=0.470  Sum_probs=71.7

Q ss_pred             hhcccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-CEeEEEE
Q 013711          342 VATNKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-EEKILVY  420 (437)
Q Consensus       342 ~~~~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~  420 (437)
                      ..-++|+..+.||+|+||.||+|.+ .|..||||.++..  ...++|.+|++++++++|||||+++|++.+. +..+|||
T Consensus         4 i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           4 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             cCHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            3445677789999999999999998 5789999999653  3457899999999999999999999999764 5689999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|.
T Consensus        81 ey~-~~g~L~   89 (262)
T d1byga_          81 EYM-AKGSLV   89 (262)
T ss_dssp             CCC-TTEEHH
T ss_pred             ecc-CCCCHH
Confidence            999 999987

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.7e-14  Score=127.27  Aligned_cols=85  Identities=28%  Similarity=0.462  Sum_probs=74.9

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++++++|||||++++++.+++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            46788899999999999999874 6889999998642   2344678999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|+
T Consensus        86 Ey~-~~g~L~   94 (263)
T d2j4za1          86 EYA-PLGTVY   94 (263)
T ss_dssp             ECC-TTCBHH
T ss_pred             eec-CCCcHH
Confidence            999 999985

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.8e-14  Score=128.17  Aligned_cols=86  Identities=22%  Similarity=0.322  Sum_probs=72.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEe--CCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE--GEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv  419 (437)
                      ++|++.+.||+|+||.||++.. .+|+.||+|.+....  ....+.+.+|+.+|++++|||||++++++.+  ...++||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688889999999999999986 468999999996543  2335679999999999999999999999875  3458999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        84 mEy~-~~g~L~~   94 (269)
T d2java1          84 MEYC-EGGDLAS   94 (269)
T ss_dssp             EECC-TTEEHHH
T ss_pred             EecC-CCCcHHH
Confidence            9999 9999863

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=6.6e-14  Score=129.04  Aligned_cols=85  Identities=24%  Similarity=0.295  Sum_probs=75.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .+++.||||++...   .....+.+.+|+.+|++++|||||++++++.+.+..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688899999999999999986 46899999998642   2345678999999999999999999999999999999999


Q ss_pred             ecccCCCccc
Q 013711          421 EFTLKNKDNW  430 (437)
Q Consensus       421 E~~~~~gsL~  430 (437)
                      ||+ ++|+|+
T Consensus        88 Ey~-~gg~L~   96 (288)
T d1uu3a_          88 SYA-KNGELL   96 (288)
T ss_dssp             CCC-TTEEHH
T ss_pred             Ecc-CCCCHH
Confidence            999 999985

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=4.6e-14  Score=131.37  Aligned_cols=85  Identities=21%  Similarity=0.366  Sum_probs=70.4

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      +.|.+.+.||+|+||.||++... +++.||||++.... ....+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            55888899999999999999864 68999999996533 23345688999999999999999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      + +||+|+
T Consensus        89 ~-~gg~L~   95 (307)
T d1a06a_          89 V-SGGELF   95 (307)
T ss_dssp             C-CSCBHH
T ss_pred             c-CCCcHH
Confidence            9 999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.1e-13  Score=129.78  Aligned_cols=85  Identities=25%  Similarity=0.351  Sum_probs=74.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      ++|.+.+.||+|+||.||++... +++.||||.++... .+...+.+|+.+|+.++|||||++++++.+++..+|||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            56788899999999999999864 68899999997543 23456889999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 013711          424 LKNKDNWI  431 (437)
Q Consensus       424 ~~~gsL~l  431 (437)
                       +||+|+-
T Consensus        84 -~gg~L~~   90 (321)
T d1tkia_          84 -SGLDIFE   90 (321)
T ss_dssp             -CCCBHHH
T ss_pred             -CCCcHHH
Confidence             9999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=6.5e-14  Score=130.14  Aligned_cols=94  Identities=29%  Similarity=0.513  Sum_probs=80.7

Q ss_pred             hhhHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccCc-cCHHHHHHHHHHHhcCCCCCccceEeE
Q 013711          337 FETIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKASG-QGAEEFKNEVVLVAKLQHRNLVRLLGF  409 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~  409 (437)
                      +.+++.++++|++.+.||+|+||.||+|++.      ++..||||+++.... +..++|.+|+.+|++++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            3456777889999999999999999999863      356899999975432 335679999999999999999999999


Q ss_pred             EEeCCEeEEEEecccCCCcccc
Q 013711          410 CLEGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       410 ~~~~~~~~lv~E~~~~~gsL~l  431 (437)
                      +...+..++||||+ ++|+|.-
T Consensus        85 ~~~~~~~~~v~e~~-~~g~L~~  105 (301)
T d1lufa_          85 CAVGKPMCLLFEYM-AYGDLNE  105 (301)
T ss_dssp             ECSSSSCEEEEECC-TTCBHHH
T ss_pred             eccCCceEEEEEec-CCCcHHH
Confidence            99999999999999 9998763

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=8.2e-14  Score=129.72  Aligned_cols=87  Identities=25%  Similarity=0.381  Sum_probs=74.9

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc---cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG---QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ..|+..+.||+|+||.||++.. .+++.||||.++....   ...+.+.+|+.+|++++|||||++++++.+++..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3478889999999999999985 4688999999975432   23457899999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ ++|+|.+.
T Consensus        95 E~~-~~g~l~~~  105 (309)
T d1u5ra_          95 EYC-LGSASDLL  105 (309)
T ss_dssp             ECC-SEEHHHHH
T ss_pred             Eec-CCCchHHH
Confidence            999 99988643

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.1e-14  Score=131.96  Aligned_cols=92  Identities=30%  Similarity=0.517  Sum_probs=78.2

Q ss_pred             hHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCL  411 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~  411 (437)
                      +|++..++|...+.||+|+||.||+|.+.      .+..||||+++... .+....|.+|+.++++++|||||+++|++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            45666778888999999999999999863      25789999997533 233456999999999999999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      ..+..++||||+ ++|+|.-
T Consensus        94 ~~~~~~lv~e~~-~~g~l~~  112 (308)
T d1p4oa_          94 QGQPTLVIMELM-TRGDLKS  112 (308)
T ss_dssp             SSSSCEEEEECC-TTCBHHH
T ss_pred             cCCceeEEEeec-CCCCHHH
Confidence            999999999999 9999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.4e-14  Score=128.56  Aligned_cols=87  Identities=25%  Similarity=0.446  Sum_probs=72.9

Q ss_pred             cccccccCccccccceeEEEEEeCCC-----CEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPSG-----QEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~~-----~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      .+.|+..++||+|+||.||+|.++..     ..||||.++... .....+|.+|+.+|.+++|||||+++|++.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            45677889999999999999987432     379999996533 333457999999999999999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      +||||+ .+|+|..
T Consensus        86 ~v~e~~-~~~~l~~   98 (283)
T d1mqba_          86 IITEYM-ENGALDK   98 (283)
T ss_dssp             EEEECC-TTEEHHH
T ss_pred             EEEEec-ccCcchh
Confidence            999999 8887653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.1e-13  Score=128.99  Aligned_cols=88  Identities=28%  Similarity=0.472  Sum_probs=71.9

Q ss_pred             cccccccCccccccceeEEEEEeCC-CC--EEEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLPS-GQ--EIAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~~-~~--~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  418 (437)
                      .++|++.++||+|+||.||+|.+.+ +.  .||||.++.. .....++|.+|+++|.++ +|||||+++|++..++..++
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            3567788999999999999998743 43  5788888643 334556899999999999 79999999999999999999


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      ||||+ ++|+|.-.
T Consensus        89 V~ey~-~~g~L~~~  101 (309)
T d1fvra_          89 AIEYA-PHGNLLDF  101 (309)
T ss_dssp             EECCC-TTCBHHHH
T ss_pred             EEEec-CCCcHHHH
Confidence            99999 99998643

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.1e-13  Score=124.45  Aligned_cols=84  Identities=27%  Similarity=0.368  Sum_probs=70.0

Q ss_pred             ccccCccccccceeEEEEEeC-CCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEe----CCEeEEE
Q 013711          347 FSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE----GEEKILV  419 (437)
Q Consensus       347 ~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv  419 (437)
                      +...++||+|+||.||++... +++.||+|.+...  .....+.|.+|+++|++++|||||++++++..    +..++||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            355678999999999999864 5889999998643  23345679999999999999999999999875    3568999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        91 mE~~-~~g~L~~  101 (270)
T d1t4ha_          91 TELM-TSGTLKT  101 (270)
T ss_dssp             EECC-CSCBHHH
T ss_pred             EeCC-CCCcHHH
Confidence            9999 9999853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2.3e-13  Score=124.76  Aligned_cols=79  Identities=29%  Similarity=0.436  Sum_probs=64.2

Q ss_pred             CccccccceeEEEEEeCC---CCEEEEEEccccCc--cCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecccC
Q 013711          351 NKLGEGGFGEVYKGVLPS---GQEIAVKRLSKASG--QGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFTLK  425 (437)
Q Consensus       351 ~~lG~G~fg~Vy~g~~~~---~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  425 (437)
                      ++||+|+||.||+|.+.+   ++.||||+++....  ...++|.+|+.+|++++|||||+++|++.. +..+|||||+ +
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~-~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA-E   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECC-T
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcC-C
Confidence            469999999999998643   46899999965322  234679999999999999999999999864 5578999999 9


Q ss_pred             CCcccc
Q 013711          426 NKDNWI  431 (437)
Q Consensus       426 ~gsL~l  431 (437)
                      +|+|.-
T Consensus        91 ~g~L~~   96 (277)
T d1xbba_          91 LGPLNK   96 (277)
T ss_dssp             TEEHHH
T ss_pred             CCcHHH
Confidence            999853

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.5e-13  Score=125.76  Aligned_cols=90  Identities=21%  Similarity=0.400  Sum_probs=74.1

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCC----CCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPS----GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE  414 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  414 (437)
                      +++..++|.+.+.||+|+||.||+|....    +..||||.++... ....+.|.+|+.+|++++|||||+++|++. .+
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~   80 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN   80 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            34556788899999999999999998642    3468999986533 233567999999999999999999999985 56


Q ss_pred             EeEEEEecccCCCcccc
Q 013711          415 EKILVYEFTLKNKDNWI  431 (437)
Q Consensus       415 ~~~lv~E~~~~~gsL~l  431 (437)
                      ..++||||+ ++|+|+-
T Consensus        81 ~~~iv~E~~-~~g~l~~   96 (273)
T d1mp8a_          81 PVWIIMELC-TLGELRS   96 (273)
T ss_dssp             SCEEEEECC-TTEEHHH
T ss_pred             eEEEEEEec-cCCcHHh
Confidence            789999999 9998864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.5e-13  Score=129.13  Aligned_cols=91  Identities=26%  Similarity=0.429  Sum_probs=75.2

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCC------CCEEEEEEcccc-CccCHHHHHHHHHHHhcC-CCCCccceEeEEE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPS------GQEIAVKRLSKA-SGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCL  411 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~------~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  411 (437)
                      ++.+.++|.+.++||+|+||.||+|....      ...||+|.+... .....+.+.+|+.+|.++ +|||||++++++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            45667789999999999999999998632      236999998653 334456899999999998 8999999999999


Q ss_pred             eCCEeEEEEecccCCCcccc
Q 013711          412 EGEEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       412 ~~~~~~lv~E~~~~~gsL~l  431 (437)
                      +.+..+|||||+ ++|+|+-
T Consensus       112 ~~~~~~lv~Ey~-~~g~L~~  130 (325)
T d1rjba_         112 LSGPIYLIFEYC-CYGDLLN  130 (325)
T ss_dssp             SSSSCEEEEECC-TTCBHHH
T ss_pred             eCCeEEEEEEcC-CCCcHHH
Confidence            999999999999 9999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=3e-13  Score=126.30  Aligned_cols=87  Identities=20%  Similarity=0.329  Sum_probs=76.1

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||+++..   .....+.+.+|+.+|+.++|||||++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4678889999999999999996 46899999999642   2345678999999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ +||+|...
T Consensus        84 E~~-~gg~l~~~   94 (316)
T d1fota_          84 DYI-EGGELFSL   94 (316)
T ss_dssp             CCC-CSCBHHHH
T ss_pred             eec-CCcccccc
Confidence            999 99987644

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.1e-13  Score=126.33  Aligned_cols=87  Identities=22%  Similarity=0.248  Sum_probs=76.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|...+.||+|+||.||+++. .+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.+.+.+++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5688889999999999999986 46899999999642   2345678999999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ ++|+|+-.
T Consensus        85 ey~-~gg~L~~~   95 (337)
T d1o6la_          85 EYA-NGGELFFH   95 (337)
T ss_dssp             ECC-TTCBHHHH
T ss_pred             ecc-CCCchhhh
Confidence            999 99998643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.4e-13  Score=128.55  Aligned_cols=93  Identities=28%  Similarity=0.423  Sum_probs=78.2

Q ss_pred             hHHhhcccccccCccccccceeEEEEEe------CCCCEEEEEEccccCc-cCHHHHHHHHHHHhcC-CCCCccceEeEE
Q 013711          339 TIEVATNKFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSKASG-QGAEEFKNEVVLVAKL-QHRNLVRLLGFC  410 (437)
Q Consensus       339 ~~~~~~~~~~~~~~lG~G~fg~Vy~g~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~  410 (437)
                      .++...++|.+.++||+|+||.||+|++      ..+..||||+++.... ....+|.+|+.++.++ +|||||+++|++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            3556677888899999999999999985      2356899999975432 3445799999999999 799999999999


Q ss_pred             EeCCEeEEEEecccCCCccccc
Q 013711          411 LEGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      .+.+..+|||||+ ++|+|+-.
T Consensus        97 ~~~~~~~lvmE~~-~~g~l~~~  117 (311)
T d1t46a_          97 TIGGPTLVITEYC-CYGDLLNF  117 (311)
T ss_dssp             CSSSSCEEEEECC-TTEEHHHH
T ss_pred             eeCCEEEEEEEcC-CCCCHHHH
Confidence            9999999999999 99987543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.37  E-value=3.5e-13  Score=123.38  Aligned_cols=85  Identities=24%  Similarity=0.332  Sum_probs=73.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc---------CHHHHHHHHHHHhcCC-CCCccceEeEEEeC
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ---------GAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEG  413 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~---------~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~  413 (437)
                      ++|++.+.||+|+||.||+++. .+++.+|||+++.....         ..+.+.+|+.+|++++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            4678889999999999999986 46899999998653211         1235889999999996 99999999999999


Q ss_pred             CEeEEEEecccCCCccc
Q 013711          414 EEKILVYEFTLKNKDNW  430 (437)
Q Consensus       414 ~~~~lv~E~~~~~gsL~  430 (437)
                      +..+|||||+ ++|+|+
T Consensus        83 ~~~~ivmE~~-~~g~L~   98 (277)
T d1phka_          83 TFFFLVFDLM-KKGELF   98 (277)
T ss_dssp             SEEEEEEECC-TTCBHH
T ss_pred             cceEEEEEcC-CCchHH
Confidence            9999999999 999985

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=6.8e-13  Score=123.57  Aligned_cols=80  Identities=30%  Similarity=0.542  Sum_probs=67.4

Q ss_pred             cCccccccceeEEEEEeCCC----CEEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEe-CCEeEEEEecc
Q 013711          350 DNKLGEGGFGEVYKGVLPSG----QEIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLE-GEEKILVYEFT  423 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~~~~----~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E~~  423 (437)
                      .++||+|+||.||+|.+.++    ..||||+++.. +....++|.+|+++|++++|||||+++|++.. +...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            57899999999999997432    36899999753 33445789999999999999999999999876 45899999999


Q ss_pred             cCCCccc
Q 013711          424 LKNKDNW  430 (437)
Q Consensus       424 ~~~gsL~  430 (437)
                       ++|+|.
T Consensus       112 -~~g~l~  117 (311)
T d1r0pa_         112 -KHGDLR  117 (311)
T ss_dssp             -TTCBHH
T ss_pred             -ecCchh
Confidence             999885

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=8e-13  Score=122.45  Aligned_cols=86  Identities=28%  Similarity=0.452  Sum_probs=72.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|+..+.||+|+||.||++.. .+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++.+++..+||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            4688889999999999999986 568999999996432  2345789999999999999999999999999999999999


Q ss_pred             cccCCCcccc
Q 013711          422 FTLKNKDNWI  431 (437)
Q Consensus       422 ~~~~~gsL~l  431 (437)
                      |+ .++.+.+
T Consensus        82 ~~-~~~~~~~   90 (298)
T d1gz8a_          82 FL-HQDLKKF   90 (298)
T ss_dssp             CC-SEEHHHH
T ss_pred             ec-CCchhhh
Confidence            99 6654443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.32  E-value=8.1e-13  Score=121.65  Aligned_cols=87  Identities=24%  Similarity=0.383  Sum_probs=76.0

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|...++||+|+||.||++..++|+.||||.++...  ....+.+.+|+.+|++++|||||++++++...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4677889999999999999998889999999996532  33457899999999999999999999999999999999999


Q ss_pred             ccCCCccccc
Q 013711          423 TLKNKDNWIG  432 (437)
Q Consensus       423 ~~~~gsL~l~  432 (437)
                      + .++.+...
T Consensus        82 ~-~~~~~~~~   90 (286)
T d1ob3a_          82 L-DQDLKKLL   90 (286)
T ss_dssp             C-SEEHHHHH
T ss_pred             e-hhhhHHHH
Confidence            9 77766554

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.32  E-value=1.1e-12  Score=120.25  Aligned_cols=86  Identities=21%  Similarity=0.203  Sum_probs=72.6

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCcc---CHHHHHHHHHHHhcCCCCCccceEeEEEeCC----Ee
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ---GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EK  416 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~  416 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||.++.....   ..+.|.+|+.++++++|||||++++++...+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            4588889999999999999985 56899999999754322   2457999999999999999999999987643    48


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      +|||||+ +||+|.-
T Consensus        87 ~lvmE~~-~g~~L~~  100 (277)
T d1o6ya_          87 YIVMEYV-DGVTLRD  100 (277)
T ss_dssp             EEEEECC-CEEEHHH
T ss_pred             EEEEECC-CCCEehh
Confidence            9999999 9998873

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.1e-12  Score=122.48  Aligned_cols=86  Identities=23%  Similarity=0.317  Sum_probs=73.1

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHHHHHHHh-cCCCCCccceEeEEEeCCEeEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKNEVVLVA-KLQHRNLVRLLGFCLEGEEKILV  419 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lv  419 (437)
                      ++|.+.+.||+|+||.||++... +++.||||+++..   .....+.+..|..++. .++|||||++++++.+++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            46788899999999999999864 6899999999642   2344567778887765 68999999999999999999999


Q ss_pred             EecccCCCcccc
Q 013711          420 YEFTLKNKDNWI  431 (437)
Q Consensus       420 ~E~~~~~gsL~l  431 (437)
                      |||+ ++|+|.-
T Consensus        82 mEy~-~~g~L~~   92 (320)
T d1xjda_          82 MEYL-NGGDLMY   92 (320)
T ss_dssp             EECC-TTCBHHH
T ss_pred             Eeec-CCCcHHH
Confidence            9999 9999874

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=6.8e-13  Score=121.26  Aligned_cols=86  Identities=33%  Similarity=0.456  Sum_probs=63.7

Q ss_pred             cccccccCccccccceeEEEEEeC--CC--CEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEe
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVLP--SG--QEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK  416 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~~--~~--~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  416 (437)
                      .++|++.+.||+|+||.||+|.+.  ++  ..||||.++..   ..+..++|.+|+.+|++++|||||+++|++.+ +..
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            356888899999999999999863  22  37899998653   22335689999999999999999999999965 467


Q ss_pred             EEEEecccCCCcccc
Q 013711          417 ILVYEFTLKNKDNWI  431 (437)
Q Consensus       417 ~lv~E~~~~~gsL~l  431 (437)
                      ++||||+ ++|+|+-
T Consensus        86 ~lv~e~~-~~~~l~~   99 (273)
T d1u46a_          86 KMVTELA-PLGSLLD   99 (273)
T ss_dssp             EEEEECC-TTCBHHH
T ss_pred             heeeeee-cCcchhh
Confidence            8999999 9888763

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.4e-12  Score=121.06  Aligned_cols=83  Identities=23%  Similarity=0.410  Sum_probs=66.3

Q ss_pred             ccccccCccccccceeEEEEEeCCCCEEEEEEccccCccCHHHHHH--HHHHHhcCCCCCccceEeEEEeCC----EeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKN--EVVLVAKLQHRNLVRLLGFCLEGE----EKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~--E~~~l~~l~H~niv~l~g~~~~~~----~~~l  418 (437)
                      +.+.+.++||+|+||.||+|++ +|+.||||+++...   .+++.+  |+..+..++|||||+++|++.+.+    .++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3466778999999999999998 78999999986432   334444  455556789999999999998753    6899


Q ss_pred             EEecccCCCccccc
Q 013711          419 VYEFTLKNKDNWIG  432 (437)
Q Consensus       419 v~E~~~~~gsL~l~  432 (437)
                      ||||+ ++|+|...
T Consensus        79 v~Ey~-~~g~L~~~   91 (303)
T d1vjya_          79 VSDYH-EHGSLFDY   91 (303)
T ss_dssp             EEECC-TTCBHHHH
T ss_pred             EEecc-cCCCHHHH
Confidence            99999 99998654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.2e-12  Score=121.31  Aligned_cols=83  Identities=27%  Similarity=0.340  Sum_probs=67.6

Q ss_pred             cCccccccceeEEEEEe-CCCCEEEEEEccccCcc-----CHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEecc
Q 013711          350 DNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQ-----GAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFT  423 (437)
Q Consensus       350 ~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  423 (437)
                      .++||+|+||.||++.. .+|+.||||+++.....     ..+.+.+|+.+|++++|||||++++++..++..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            46899999999999996 46899999999653221     1246899999999999999999999999999999999999


Q ss_pred             cCCCcccccc
Q 013711          424 LKNKDNWIGQ  433 (437)
Q Consensus       424 ~~~gsL~l~~  433 (437)
                       .++++....
T Consensus        83 -~~~~~~~~~   91 (299)
T d1ua2a_          83 -ETDLEVIIK   91 (299)
T ss_dssp             -SEEHHHHHT
T ss_pred             -cchHHhhhh
Confidence             887766543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=3.5e-12  Score=119.11  Aligned_cols=85  Identities=31%  Similarity=0.513  Sum_probs=67.8

Q ss_pred             ccccccCccccccceeEEEEEeC-CCC----EEEEEEcccc-CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQ----EIAVKRLSKA-SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~----~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  418 (437)
                      .+|+..++||+|+||.||+|.+. +|+    .||+|.++.. +.+..++|.+|+.+|++++|||||+++|++.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            35788899999999999999863 343    6899998653 345577899999999999999999999999864 5678


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ++||+ .+|+|+-
T Consensus        88 v~e~~-~~~~l~~   99 (317)
T d1xkka_          88 ITQLM-PFGCLLD   99 (317)
T ss_dssp             EEECC-TTCBHHH
T ss_pred             EEEec-cCCcccc
Confidence            88999 8888753

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=3.6e-12  Score=120.53  Aligned_cols=87  Identities=24%  Similarity=0.279  Sum_probs=75.8

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEcccc---CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA---SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  420 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+.+|+.++|||||++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4688889999999999999986 46899999998642   2345678999999999999999999999999999999999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ .+|+|+-.
T Consensus       121 e~~-~~g~l~~~  131 (350)
T d1rdqe_         121 EYV-AGGEMFSH  131 (350)
T ss_dssp             ECC-TTCBHHHH
T ss_pred             ccc-cccchhhh
Confidence            999 99998543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.1e-12  Score=121.45  Aligned_cols=92  Identities=22%  Similarity=0.400  Sum_probs=71.1

Q ss_pred             HHhhcccccccCccccccceeEEEEEeCC--------CCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceEeE
Q 013711          340 IEVATNKFSTDNKLGEGGFGEVYKGVLPS--------GQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLLGF  409 (437)
Q Consensus       340 ~~~~~~~~~~~~~lG~G~fg~Vy~g~~~~--------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~  409 (437)
                      ++++.++|.+.+.||+|+||.||+++...        +..||||.++... .....++.+|...+.++ +|||||+++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            34556788888999999999999998522        2479999997543 23456789999999888 89999999999


Q ss_pred             EEeCCEeEEEEecccCCCccccc
Q 013711          410 CLEGEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       410 ~~~~~~~~lv~E~~~~~gsL~l~  432 (437)
                      +.+++..++||||+ ++|+|+-.
T Consensus        88 ~~~~~~~~~v~e~~-~~g~l~~~  109 (299)
T d1fgka_          88 CTQDGPLYVIVEYA-SKGNLREY  109 (299)
T ss_dssp             ECSSSSCEEEECCC-TTCBHHHH
T ss_pred             cccCCeEEEEEEcc-CCCcHHHH
Confidence            99999999999999 99998653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=4.3e-12  Score=120.64  Aligned_cols=86  Identities=27%  Similarity=0.316  Sum_probs=70.7

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEcccc---CccCHHHHHH---HHHHHhcCCCCCccceEeEEEeCCEeE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKA---SGQGAEEFKN---EVVLVAKLQHRNLVRLLGFCLEGEEKI  417 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~---~~~~~~~~~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  417 (437)
                      ++|.+.+.||+|+||.||++... +|+.||||++...   .......+.+   |+.+++.++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            56888899999999999999864 6899999998532   1223333444   477788889999999999999999999


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ ++|+|+-
T Consensus        84 ivmE~~-~gg~L~~   96 (364)
T d1omwa3          84 FILDLM-NGGDLHY   96 (364)
T ss_dssp             EEECCC-CSCBHHH
T ss_pred             EEEEec-CCCcHHH
Confidence            999999 9999863

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=8.1e-12  Score=115.03  Aligned_cols=87  Identities=26%  Similarity=0.403  Sum_probs=75.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCCEeEEEEe
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYE  421 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  421 (437)
                      ++|.+.++||+|+||.||+++. .+++.||||+++...  ....+.+.+|+.+|+.++|||||++++++......++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            3577889999999999999996 468899999996433  2335689999999999999999999999999999999999


Q ss_pred             cccCCCccccc
Q 013711          422 FTLKNKDNWIG  432 (437)
Q Consensus       422 ~~~~~gsL~l~  432 (437)
                      ++ .+++|+..
T Consensus        82 ~~-~~~~l~~~   91 (292)
T d1unla_          82 FC-DQDLKKYF   91 (292)
T ss_dssp             CC-SEEHHHHH
T ss_pred             ec-cccccccc
Confidence            99 88887654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.7e-11  Score=115.16  Aligned_cols=81  Identities=20%  Similarity=0.255  Sum_probs=66.7

Q ss_pred             cccccc-CccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEe----CCEeE
Q 013711          345 NKFSTD-NKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLE----GEEKI  417 (437)
Q Consensus       345 ~~~~~~-~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~----~~~~~  417 (437)
                      ++|.+. +.||+|+||.||++.. .+++.||||.++.     .+.+.+|+.++.++ +|||||++++++.+    ...++
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            456655 4699999999999986 5689999999853     35678899987654 89999999999875    35689


Q ss_pred             EEEecccCCCcccc
Q 013711          418 LVYEFTLKNKDNWI  431 (437)
Q Consensus       418 lv~E~~~~~gsL~l  431 (437)
                      |||||+ +||+|+-
T Consensus        86 ivmEy~-~gg~L~~   98 (335)
T d2ozaa1          86 IVMECL-DGGELFS   98 (335)
T ss_dssp             EEEECC-CSEEHHH
T ss_pred             EEEECC-CCCcHHH
Confidence            999999 9999963

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.2e-11  Score=114.36  Aligned_cols=95  Identities=24%  Similarity=0.396  Sum_probs=74.2

Q ss_pred             chhhHHhhcccccccCccccccceeEEEEEeC------CCCEEEEEEccccC-ccCHHHHHHHHHHHhcC-CCCCccceE
Q 013711          336 DFETIEVATNKFSTDNKLGEGGFGEVYKGVLP------SGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKL-QHRNLVRLL  407 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~g~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~  407 (437)
                      +.+.++...++|.+.++||+|+||.||+|...      +++.||||.++... ....+.+.+|..++.++ +|+|||.++
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            34566677788999999999999999999852      24689999997533 23356788888888877 789999999


Q ss_pred             eEEEeC-CEeEEEEecccCCCcccc
Q 013711          408 GFCLEG-EEKILVYEFTLKNKDNWI  431 (437)
Q Consensus       408 g~~~~~-~~~~lv~E~~~~~gsL~l  431 (437)
                      +++... ...++||||+ ++|+|.-
T Consensus        84 ~~~~~~~~~~~iv~E~~-~~g~L~~  107 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFC-KFGNLST  107 (299)
T ss_dssp             EEECSTTSCCEEEEECC-TTCBHHH
T ss_pred             eeeccCCCeEEEEEEec-CCCcHHH
Confidence            988764 4689999999 9999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.15  E-value=3.7e-11  Score=112.58  Aligned_cols=84  Identities=23%  Similarity=0.403  Sum_probs=72.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-CCCccceEeEEEeC--CEeEEEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-HRNLVRLLGFCLEG--EEKILVY  420 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~  420 (437)
                      ++|.+.++||+|+||.||++.. .+|+.||||+++..   ..+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5688899999999999999986 46899999998643   3567899999999995 99999999998854  4589999


Q ss_pred             ecccCCCccccc
Q 013711          421 EFTLKNKDNWIG  432 (437)
Q Consensus       421 E~~~~~gsL~l~  432 (437)
                      ||+ ++++|.-.
T Consensus       112 e~~-~~~~L~~~  122 (328)
T d3bqca1         112 EHV-NNTDFKQL  122 (328)
T ss_dssp             ECC-CSCBGGGT
T ss_pred             eec-CCCcHHHH
Confidence            999 99987654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.9e-11  Score=115.93  Aligned_cols=87  Identities=22%  Similarity=0.318  Sum_probs=69.6

Q ss_pred             ccccccCccccccceeEEEEEeC-CCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~  415 (437)
                      ++|.+.++||+|+||.||+|... +|+.||||+++...  ....+.+.+|+.++++++|||||++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            46888899999999999999864 68999999996532  23345689999999999999999999998643      57


Q ss_pred             eEEEEecccCCCccccc
Q 013711          416 KILVYEFTLKNKDNWIG  432 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~  432 (437)
                      +++||||+ .++.+...
T Consensus        97 ~~iv~Ey~-~~~l~~~~  112 (355)
T d2b1pa1          97 VYLVMELM-DANLCQVI  112 (355)
T ss_dssp             EEEEEECC-SEEHHHHH
T ss_pred             eEEEEecc-chHHHHhh
Confidence            89999999 76655443

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=4.1e-11  Score=111.69  Aligned_cols=88  Identities=26%  Similarity=0.436  Sum_probs=70.4

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-------  413 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-------  413 (437)
                      .++|++.++||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.+|++++||||+++++.+...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788899999999999999996 46899999998543  233457789999999999999999999988653       


Q ss_pred             -CEeEEEEecccCCCccccc
Q 013711          414 -EEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       414 -~~~~lv~E~~~~~gsL~l~  432 (437)
                       ...++||||+ .++.+...
T Consensus        89 ~~~~~iv~e~~-~~~~~~~~  107 (318)
T d3blha1          89 KGSIYLVFDFC-EHDLAGLL  107 (318)
T ss_dssp             --CEEEEEECC-CEEHHHHH
T ss_pred             CceEEEEEecc-CCCccchh
Confidence             3589999999 77766543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.7e-11  Score=114.52  Aligned_cols=87  Identities=21%  Similarity=0.297  Sum_probs=73.9

Q ss_pred             ccccccCccccccceeEEEEEe----CCCCEEEEEEcccc----CccCHHHHHHHHHHHhcCCC-CCccceEeEEEeCCE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSKA----SGQGAEEFKNEVVLVAKLQH-RNLVRLLGFCLEGEE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~----~~~~~vAvK~l~~~----~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~  415 (437)
                      ++|+..++||+|+||.||++..    .+|+.||||.++..    .....+.+.+|+.+|++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688899999999999999974    24789999998642    22345678899999999966 899999999999999


Q ss_pred             eEEEEecccCCCccccc
Q 013711          416 KILVYEFTLKNKDNWIG  432 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~  432 (437)
                      .++++||+ .+|+|+-.
T Consensus       104 ~~~v~e~~-~~~~L~~~  119 (322)
T d1vzoa_         104 LHLILDYI-NGGELFTH  119 (322)
T ss_dssp             EEEEECCC-CSCBHHHH
T ss_pred             eeeeeecc-cccHHHHH
Confidence            99999999 99998644

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2e-11  Score=111.29  Aligned_cols=85  Identities=27%  Similarity=0.497  Sum_probs=69.7

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCc------cCHHHHHHHHHHHhcCC--CCCccceEeEEEeCCE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASG------QGAEEFKNEVVLVAKLQ--HRNLVRLLGFCLEGEE  415 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~  415 (437)
                      ++|.+.+.||+|+||.||++.. .+|+.||||.++....      .....+.+|+.+|++++  |||||++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            4688889999999999999986 4689999999864321      12234778999999986  9999999999999999


Q ss_pred             eEEEEecccCC-Cccc
Q 013711          416 KILVYEFTLKN-KDNW  430 (437)
Q Consensus       416 ~~lv~E~~~~~-gsL~  430 (437)
                      .++||||+ .+ ++++
T Consensus        84 ~~lv~e~~-~~~~~l~   98 (273)
T d1xwsa_          84 FVLILERP-EPVQDLF   98 (273)
T ss_dssp             EEEEEECC-SSEEEHH
T ss_pred             EEEEEEec-cCcchHH
Confidence            99999999 65 4443

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.1e-11  Score=113.10  Aligned_cols=80  Identities=26%  Similarity=0.419  Sum_probs=61.7

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEcccc--CccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC------
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKA--SGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE------  414 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  414 (437)
                      .+.|...++||+|+||.||++.. .+|+.||||+++..  .....+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            35688889999999999999986 46999999999753  2233467899999999999999999999997654      


Q ss_pred             EeEEEEecc
Q 013711          415 EKILVYEFT  423 (437)
Q Consensus       415 ~~~lv~E~~  423 (437)
                      ..+|||||+
T Consensus        97 ~~~lv~e~~  105 (346)
T d1cm8a_          97 DFYLVMPFM  105 (346)
T ss_dssp             CCEEEEECC
T ss_pred             eEEEEEecc
Confidence            579999999

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=5.6e-11  Score=112.33  Aligned_cols=79  Identities=28%  Similarity=0.440  Sum_probs=64.6

Q ss_pred             cccccCccccccceeEEEEEeC-CCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccceEeEEEeC------CEeEE
Q 013711          346 KFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG------EEKIL  418 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  418 (437)
                      .|...++||+|+||.||+++.. +|+.||||++.....    .+.+|+.+|++++|||||++++++...      ..++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            4667789999999999999974 689999999965432    234799999999999999999998653      24789


Q ss_pred             EEecccCCCcc
Q 013711          419 VYEFTLKNKDN  429 (437)
Q Consensus       419 v~E~~~~~gsL  429 (437)
                      ||||+ +++.+
T Consensus        97 v~Ey~-~~~~~  106 (350)
T d1q5ka_          97 VLDYV-PETVY  106 (350)
T ss_dssp             EEECC-SEEHH
T ss_pred             EEecc-CCccH
Confidence            99999 76643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.6e-11  Score=112.20  Aligned_cols=88  Identities=20%  Similarity=0.287  Sum_probs=71.1

Q ss_pred             cccccccCccccccceeEEEEEe-CCCCEEEEEEccccC--ccCHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CE
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS--GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEG-----EE  415 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~  415 (437)
                      .++|.+.++||+|+||.||++.. .+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            35688899999999999999985 569999999997532  23345789999999999999999999998643     34


Q ss_pred             eEEEEecccCCCccccc
Q 013711          416 KILVYEFTLKNKDNWIG  432 (437)
Q Consensus       416 ~~lv~E~~~~~gsL~l~  432 (437)
                      .++++||+ .+|+|+-.
T Consensus        97 ~~~i~~~~-~gg~L~~~  112 (348)
T d2gfsa1          97 DVYLVTHL-MGADLNNI  112 (348)
T ss_dssp             CCEEEEEC-CSEEHHHH
T ss_pred             eEEEEEee-cCCchhhh
Confidence            57778888 89998543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.3e-11  Score=111.73  Aligned_cols=86  Identities=14%  Similarity=0.277  Sum_probs=66.2

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccC-ccCHHHHHHHHHHHhcCCCCCccceEeEEEeCC----EeEE
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKAS-GQGAEEFKNEVVLVAKLQHRNLVRLLGFCLEGE----EKIL  418 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~l  418 (437)
                      ++|...++||+|+||.||+|.. .+|+.||||+++... ....+.+++|+.+|+.++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            4588889999999999999985 579999999997533 233467899999999999999999999987643    2345


Q ss_pred             EEecccCCCcccc
Q 013711          419 VYEFTLKNKDNWI  431 (437)
Q Consensus       419 v~E~~~~~gsL~l  431 (437)
                      ++||+ .+|+|+-
T Consensus        88 l~~~~-~~g~L~~   99 (345)
T d1pmea_          88 LVTHL-MGADLYK   99 (345)
T ss_dssp             EEEEC-CCEEHHH
T ss_pred             EEEee-cCCchhh
Confidence            56677 7899873

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.1e-10  Score=108.08  Aligned_cols=88  Identities=25%  Similarity=0.404  Sum_probs=67.2

Q ss_pred             cccccccCccccccceeEEEEEe-CC-CCEEEEEEccccC--ccCHHHHHHHHHHHhcC---CCCCccceEeEEEe----
Q 013711          344 TNKFSTDNKLGEGGFGEVYKGVL-PS-GQEIAVKRLSKAS--GQGAEEFKNEVVLVAKL---QHRNLVRLLGFCLE----  412 (437)
Q Consensus       344 ~~~~~~~~~lG~G~fg~Vy~g~~-~~-~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~----  412 (437)
                      .++|++.++||+|+||.||++.. .+ ++.||||+++...  ......+.+|+.+|+.|   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46788899999999999999986 34 5679999986432  22234567787777665   89999999999864    


Q ss_pred             -CCEeEEEEecccCCCccccc
Q 013711          413 -GEEKILVYEFTLKNKDNWIG  432 (437)
Q Consensus       413 -~~~~~lv~E~~~~~gsL~l~  432 (437)
                       ....++++||+ .++.+.+.
T Consensus        86 ~~~~~~~~~e~~-~~~~~~~~  105 (305)
T d1blxa_          86 RETKLTLVFEHV-DQDLTTYL  105 (305)
T ss_dssp             SEEEEEEEEECC-SCBHHHHH
T ss_pred             cCceEEEEEEec-cCCchhhh
Confidence             24689999999 88776443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.87  E-value=1.2e-09  Score=100.32  Aligned_cols=82  Identities=22%  Similarity=0.373  Sum_probs=68.0

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCC-CCccceEeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQH-RNLVRLLGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E~  422 (437)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.++...  ..+.+.+|++.+..++| +|++.+++++......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            4688889999999999999996 468899999986532  22457788899999965 8999999999999999999999


Q ss_pred             ccCCCccc
Q 013711          423 TLKNKDNW  430 (437)
Q Consensus       423 ~~~~gsL~  430 (437)
                      +  +++|.
T Consensus        83 ~--~~~l~   88 (293)
T d1csna_          83 L--GPSLE   88 (293)
T ss_dssp             C--CCBHH
T ss_pred             c--CCCHH
Confidence            9  45653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.83  E-value=2.5e-09  Score=98.39  Aligned_cols=82  Identities=22%  Similarity=0.343  Sum_probs=64.4

Q ss_pred             ccccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCCCCCccce-EeEEEeCCEeEEEEec
Q 013711          345 NKFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQHRNLVRL-LGFCLEGEEKILVYEF  422 (437)
Q Consensus       345 ~~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l-~g~~~~~~~~~lv~E~  422 (437)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||++.....  .+++..|+++++.++|+|++.. .++...++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            3588899999999999999986 4689999999865432  2457899999999987765554 5555778889999999


Q ss_pred             ccCCCcc
Q 013711          423 TLKNKDN  429 (437)
Q Consensus       423 ~~~~gsL  429 (437)
                      + +++.+
T Consensus        85 ~-~~~l~   90 (299)
T d1ckia_          85 L-GPSLE   90 (299)
T ss_dssp             C-CCBHH
T ss_pred             c-CCchh
Confidence            9 55433

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.32  E-value=4.7e-07  Score=76.90  Aligned_cols=76  Identities=18%  Similarity=0.190  Sum_probs=56.9

Q ss_pred             ccCccccccceeEEEEEeCCCCEEEEEEccccCc-----c-------------CHHHHHHHHHHHhcCCCCCccceEeEE
Q 013711          349 TDNKLGEGGFGEVYKGVLPSGQEIAVKRLSKASG-----Q-------------GAEEFKNEVVLVAKLQHRNLVRLLGFC  410 (437)
Q Consensus       349 ~~~~lG~G~fg~Vy~g~~~~~~~vAvK~l~~~~~-----~-------------~~~~~~~E~~~l~~l~H~niv~l~g~~  410 (437)
                      +.++||+|+||.||+|...+|+.||||+++....     .             ......+|...+.++.|.+++..++..
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4688999999999999988899999998753110     0             012345788899999999999887542


Q ss_pred             EeCCEeEEEEecccCCCcc
Q 013711          411 LEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       411 ~~~~~~~lv~E~~~~~gsL  429 (437)
                          ..+|+|||+ ++..+
T Consensus        84 ----~~~lvme~~-~~~~~   97 (191)
T d1zara2          84 ----GNAVLMELI-DAKEL   97 (191)
T ss_dssp             ----TTEEEEECC-CCEEG
T ss_pred             ----CCEEEEEee-ccccc
Confidence                237999999 76543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.25  E-value=4e-07  Score=85.48  Aligned_cols=80  Identities=19%  Similarity=0.249  Sum_probs=61.7

Q ss_pred             cccccCccccccceeEEEEEe-CCCCEEEEEEccccCccCHHHHHHHHHHHhcCC-----------CCCccceEeEEEe-
Q 013711          346 KFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ-----------HRNLVRLLGFCLE-  412 (437)
Q Consensus       346 ~~~~~~~lG~G~fg~Vy~g~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~-  412 (437)
                      .|.+.++||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.+++.++           |+|||++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999986 568999999996532 22456788988888765           5789999988764 


Q ss_pred             -CCEeEEEEecccCCC
Q 013711          413 -GEEKILVYEFTLKNK  427 (437)
Q Consensus       413 -~~~~~lv~E~~~~~g  427 (437)
                       ....+++++++ ..+
T Consensus        93 ~~~~~~~~~~~~-~~~  107 (362)
T d1q8ya_          93 GPNGVHVVMVFE-VLG  107 (362)
T ss_dssp             ETTEEEEEEEEC-CCC
T ss_pred             cccceeeeeeec-ccc
Confidence             45667777776 443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.98  E-value=0.11  Score=44.36  Aligned_cols=70  Identities=14%  Similarity=0.033  Sum_probs=51.3

Q ss_pred             ceeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcC-CCCCccceEeEEEeCCEeEEEEecccCCCcc
Q 013711          358 FGEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFTLKNKDN  429 (437)
Q Consensus       358 fg~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~~gsL  429 (437)
                      ...||+... +++.+.+|+...........+.+|...+..+ .|--+.+++.+...++..++|||++ +|..+
T Consensus        27 ~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l-~G~~~   97 (263)
T d1j7la_          27 PAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA-DGVLC   97 (263)
T ss_dssp             SSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC-SSEEH
T ss_pred             CCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEec-ccccc
Confidence            467998876 5666788887654434444577888887766 3444677888888888999999999 87765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.68  E-value=3  Score=34.46  Aligned_cols=68  Identities=15%  Similarity=0.098  Sum_probs=49.6

Q ss_pred             eeEEEEEeCCCCEEEEEEccccCccCHHHHHHHHHHHhcCC--CCCccceEeEEEeCCEeEEEEecccCCCccc
Q 013711          359 GEVYKGVLPSGQEIAVKRLSKASGQGAEEFKNEVVLVAKLQ--HRNLVRLLGFCLEGEEKILVYEFTLKNKDNW  430 (437)
Q Consensus       359 g~Vy~g~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv~E~~~~~gsL~  430 (437)
                      ..||+...+++..+.+|.-+....   ..+..|...++.+.  +-.+.+++++..+++..++|||++ +|-++.
T Consensus        25 ~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i-~G~~~~   94 (255)
T d1nd4a_          25 AAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV-PGQDLL   94 (255)
T ss_dssp             CEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC-SSEETT
T ss_pred             CeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEee-eccccc
Confidence            578999887777788898654332   34667777776663  344677888888888899999999 876653