Your job contains 1 sequence.
>013717
MRVRSWLATCATTTTANDSTVPFPKSQRHLVSDSSSSSDATGSSTSPSDRSYSVSLQSNL
SLQTLPSVPSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASSHEIN
VYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQLTPTKHHKLKTT
LPTVNDRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRAS
DLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV
NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGS
ADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV
SVSCPNSSPLNLQKWNL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013717
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 1231 2.6e-125 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 803 6.0e-80 1
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 673 1.1e-68 2
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 585 7.5e-57 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 573 1.4e-55 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 564 1.3e-54 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 562 2.1e-54 1
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 559 4.3e-54 1
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 539 5.6e-52 1
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 503 3.7e-48 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 237 5.7e-17 2
TAIR|locus:4515102561 - symbol:AT1G21651 species:3702 "Ar... 231 3.0e-16 1
ZFIN|ZDB-GENE-061110-55 - symbol:zgc:153492 "zgc:153492" ... 226 4.8e-16 1
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 225 1.0e-15 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 225 1.0e-15 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 217 1.1e-15 2
ZFIN|ZDB-GENE-030131-6622 - symbol:wdr48 "WD repeat domai... 224 1.4e-15 1
UNIPROTKB|Q4R2Z6 - symbol:WDR48 "WD repeat-containing pro... 222 2.0e-15 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 221 2.3e-15 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 221 2.3e-15 1
UNIPROTKB|F1MV75 - symbol:WDR48 "WD repeat-containing pro... 222 2.3e-15 1
UNIPROTKB|Q32PG3 - symbol:WDR48 "WD repeat-containing pro... 222 2.3e-15 1
UNIPROTKB|E2RJ50 - symbol:WDR48 "Uncharacterized protein"... 222 2.3e-15 1
UNIPROTKB|Q8TAF3 - symbol:WDR48 "WD repeat-containing pro... 222 2.3e-15 1
UNIPROTKB|F2Z5V5 - symbol:WDR48 "Uncharacterized protein"... 222 2.3e-15 1
UNIPROTKB|Q5RAW8 - symbol:WDR48 "WD repeat-containing pro... 222 2.3e-15 1
MGI|MGI:1914811 - symbol:Wdr48 "WD repeat domain 48" spec... 221 3.0e-15 1
RGD|1309702 - symbol:Wdr48 "WD repeat domain 48" species:... 221 3.0e-15 1
UNIPROTKB|Q5F3K4 - symbol:WDR48 "WD repeat-containing pro... 221 3.0e-15 1
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 218 3.8e-15 1
UNIPROTKB|Q05B17 - symbol:wdr48 "WD repeat-containing pro... 220 3.9e-15 1
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 219 5.0e-15 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 217 5.2e-15 1
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 216 6.8e-15 1
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 215 7.5e-15 1
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 215 8.2e-15 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 215 8.2e-15 1
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 215 8.8e-15 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 215 8.9e-15 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 215 8.9e-15 1
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 215 9.4e-15 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 215 9.4e-15 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 215 9.4e-15 1
ZFIN|ZDB-GENE-070112-2212 - symbol:traf7 "TNF receptor-as... 216 1.0e-14 1
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 219 1.1e-14 1
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 213 1.4e-14 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 213 1.4e-14 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 213 1.7e-14 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 213 1.8e-14 1
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 213 2.0e-14 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 213 2.0e-14 1
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 213 2.0e-14 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 213 2.0e-14 1
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 212 2.6e-14 1
UNIPROTKB|I3LMJ3 - symbol:LOC100738291 "Uncharacterized p... 209 4.0e-14 1
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 209 4.2e-14 1
MGI|MGI:3042141 - symbol:Traf7 "TNF receptor-associated f... 210 4.2e-14 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 221 4.3e-14 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 203 4.6e-14 1
RGD|1559653 - symbol:Traf7 "TNF receptor-associated facto... 210 4.7e-14 1
UNIPROTKB|E2QXW8 - symbol:TRAF7 "Uncharacterized protein"... 210 5.2e-14 1
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 203 6.5e-14 2
UNIPROTKB|Q6Q0C0 - symbol:TRAF7 "E3 ubiquitin-protein lig... 209 6.8e-14 1
UNIPROTKB|F1RFA9 - symbol:TRAF7 "Uncharacterized protein"... 209 6.8e-14 1
UNIPROTKB|F1P0J6 - symbol:TRAF7 "Uncharacterized protein"... 208 8.6e-14 1
UNIPROTKB|Q5EA56 - symbol:TRAF7 "Uncharacterized protein"... 208 8.8e-14 1
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 205 1.1e-13 1
TAIR|locus:2028481 - symbol:SCD1 "STOMATAL CYTOKINESIS-DE... 209 1.6e-13 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 203 2.5e-13 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 196 3.3e-13 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 202 3.5e-13 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 199 3.7e-13 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 201 6.8e-13 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 195 1.5e-12 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 195 1.5e-12 1
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 197 1.6e-12 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 189 2.4e-12 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 194 2.6e-12 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 194 3.0e-12 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 193 3.4e-12 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 193 3.8e-12 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 187 4.1e-12 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 192 4.6e-12 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 193 4.6e-12 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 193 4.7e-12 1
TAIR|locus:2155904 - symbol:AT5G49200 species:3702 "Arabi... 188 6.1e-12 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 167 7.5e-12 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 191 8.7e-12 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 178 1.5e-11 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 178 1.5e-11 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 180 1.7e-11 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 183 2.0e-11 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 180 2.1e-11 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 182 2.8e-11 1
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 187 3.1e-11 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 179 3.5e-11 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 179 3.8e-11 1
POMBASE|SPBC21B10.05c - symbol:pop3 "WD repeat protein Po... 117 4.3e-11 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 182 4.4e-11 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 178 4.5e-11 1
WARNING: Descriptions of 700 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 247/406 (60%), Positives = 297/406 (73%)
Query: 24 PKSQRHLVXXXXXXXXXXXXXXXXXXRSYSVSLQSNLSLQTLPSVPSLQKLSPDETINFS 83
PKS +HL S SL S+LSLQTLPSVPSLQK+ P T+
Sbjct: 16 PKSPKHLDSGESATSSSSLSDVTTG----SSSLHSSLSLQTLPSVPSLQKI-PSTTV--- 67
Query: 84 SASHLCINSVQLGHK-LPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDSSS 142
+ SH +S +L + LP+ C+AV+ +L+A S HE+++YDR ++TFN D S
Sbjct: 68 TVSHSVTSSFKLRERSLPVTCLAVNGGYLFAVSGHEVSIYDRD--MCAHLDTFNGQDPFS 125
Query: 143 GSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYVTVRR 202
G+VKSV F KIFTAHQD KI VW+ +NDRL RF LP +YV VRR
Sbjct: 126 GTVKSVGFSGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQVRR 185
Query: 203 HKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
HKK+LWIEH DAVT LAV++G IYSVSWDK+LKIWRASDLRC ESIKAH+DAVNA+AVS
Sbjct: 186 HKKRLWIEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST 245
Query: 263 GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSIL 322
GTVYTGSADR+IRVWAKP EKRH L+ATLEKHKSAVNALAL+DDG+VLFSG+CDRSIL
Sbjct: 246 NGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSIL 305
Query: 323 VWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVL 382
VW+RED++N+M V GALRGH KAIL L NV+ LL+SGSADRTVRIW+RG D + CL VL
Sbjct: 306 VWEREDTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVL 365
Query: 383 EGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
GHTKPVKSL AV E+ + VVS+ SGSLDGE++ W+VSV+ P++S
Sbjct: 366 SGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNS 411
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 184/396 (46%), Positives = 245/396 (61%)
Query: 50 RSYSVSLQSNLSLQTLPSVPSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHN 109
+S S + S LS +LP VPSL SS H C+ +++ + +AV
Sbjct: 27 QSESSTSSSLLSQPSLPLVPSLSFQHQS-----SSVDHHCLATLK-DKSSYVSSLAVSDK 80
Query: 110 FLYAASSH-EINVYDRTGTTWTSINTFNDND---SSSGSVKSVTFCDGKIFTAHQDCKIR 165
LY SS+ EI V+ R +T +D + + +G VKS+ K+ +AHQD KIR
Sbjct: 81 LLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIR 140
Query: 166 VWQXXXXXXXXXX-----XXXXXVNDRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAV 220
VW+ +NDR SYV VRRHKK W+ H DAV+ LA+
Sbjct: 141 VWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVEVRRHKKCTWVHHVDAVSSLAL 200
Query: 221 NN--GLIYSVSWDKSLKIWRASDLRCLESI-KAHEDAVNAVAVSAGGTVYTGSADRKIRV 277
+ L+YS SWD+S KIWR SD +CL+SI KAH+DA+NA+ VS G VYTGSAD+KI+V
Sbjct: 201 SQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKV 260
Query: 278 WAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR----EDSANHM 333
W K +K+H+L+ATL KH SAVNALA+S+DG VL+SGACDRSILVW+R +D HM
Sbjct: 261 WNK--KDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHM 318
Query: 334 VVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRG---SDGRFGCLAVLEGHTKPVK 390
V GALRGH KAI+CL + L++SGSAD+++R+W+RG +G + CLAVLEGHTKPVK
Sbjct: 319 SVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLMEKEG-YSCLAVLEGHTKPVK 377
Query: 391 SLT-AVTEEGQNGVVS--VFSGSLDGEIRAWQVSVS 423
SL +V++ N S V+SGSLD ++ W + VS
Sbjct: 378 SLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNLRVS 413
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 673 (242.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 137/300 (45%), Positives = 197/300 (65%)
Query: 143 GSVKSVTFCDGKIFTAHQDCKIRVW-------QXXXXXXXXXXXXXXXVNDRLLRFMLPN 195
G+VKS+ K+FTAHQD KIRVW + ++DR + ++P
Sbjct: 89 GAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMPK 148
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESI-KAHE 252
+ V +RRHKK W+ H DAV+GLA++ +G L+YSVSWD++LKIWR +D +CLES AH+
Sbjct: 149 NQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHD 208
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE------KRHALIATLEKHKSAVNALALS 306
DA+NAVA+S G +YTGS+D++I+VW K NE ++H+L+A L +H S +NALALS
Sbjct: 209 DAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALS 268
Query: 307 D-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTV 365
+G++L SG D SILVW+R+D + +VV G LRGH +++LCL V+ +L SGSAD+TV
Sbjct: 269 GTNGSLLHSGGSDGSILVWERDDGGD-IVVVGMLRGHTESVLCLAVVSDILCSGSADKTV 327
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAV---TEEGQNGVVSVFSGSLDGEIRAWQVSV 422
R+W+ + + CLA+LEGH PVK LT + + ++SG LD +++ WQV V
Sbjct: 328 RLWKCSAKD-YSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQVLV 386
Score = 155 (59.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 212 GDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA 271
G AV L + +++ D +++W+ +D+ ED V T+ T S
Sbjct: 88 GGAVKSLVILADKLFTAHQDHKIRVWKINDV-------VEED-VGGKKYMHLATMPTIS- 138
Query: 272 DRKIRVWAKPFNE---KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
DR + P N+ +RH A+ H AV+ LALS DGT+L+S + DR++ +W D
Sbjct: 139 DRFAKC-LMPKNQVEIRRHKK-ASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTD 196
Query: 329 SANHMVVTGALRGHGKAILCL-INVAGLLMSGSADRTVRIWQRGSDG-------RFGCLA 380
T A H AI + ++ G + +GS+D+ +++W++ + + +A
Sbjct: 197 FKCLESFTNA---HDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVA 253
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
+L H + +L G NG + + SG DG I W+
Sbjct: 254 ILSEHNSGINALAL---SGTNGSL-LHSGGSDGSILVWE 288
Score = 42 (19.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 145 VKSVTFCDGKIFTAHQDCKIRVW 167
+ S+T +++T D +R+W
Sbjct: 41 ISSLTLAGKRLYTGSNDGVVRLW 63
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 130/350 (37%), Positives = 203/350 (58%)
Query: 101 IGCIAVHHNFLYAASSHEINVYDRTGT----TWTSINTFNDNDSSSGSVKSVTFCDGKIF 156
IG + +Y+ ++ + +Y + + W ++ F+ +SG VK++ KIF
Sbjct: 89 IGSLVREEGHIYSLAATKDLLYTGSDSKNIRVWKNLKEFSAFKCNSGLVKAIVISGEKIF 148
Query: 157 TAHQDCKIRVWQXXXXXXXXXXXXXX--XVNDRLLRFMLPNSYVTVRRHKKKLWIEHGDA 214
T HQD KIRVW+ + D + P +YV V++H+ LWI+H DA
Sbjct: 149 TGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADA 208
Query: 215 VTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSAD 272
V+ L++N+ GL+YS SWD+++K+WR +D +CLESI AH+DAVN+V + V++GSAD
Sbjct: 209 VSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSAD 268
Query: 273 RKIRVWAKPFNEK--RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
++ W + K +H L+ TL K +SAV ALA+S +G ++ G+ D + W+RE
Sbjct: 269 GTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQL 328
Query: 331 NHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKP 388
N+ G L+GH A+LCL VAG L+ SGSAD+T+ +W+R DG CL+VL GHT P
Sbjct: 329 NY---GGILKGHKLAVLCL-EVAGSLVFSGSADKTICVWKR--DGNIHTCLSVLTGHTGP 382
Query: 389 VKSLTAVTE----EGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQK 434
VK L + E ++ V+SGSLD ++ W VS S + + +++ +
Sbjct: 383 VKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVSESFIDMNQMSMMQ 432
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 123/308 (39%), Positives = 179/308 (58%)
Query: 129 WTSINTFNDNDSSSGSVKSVTFC-DGKIFTAHQDCKIRVWQXXXXXXXXXXXXXX--XVN 185
W + S+SG VK++ D +IFT HQD KIRVW+ +
Sbjct: 163 WKDLKDHTGFKSTSGLVKAIVITGDNRIFTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLK 222
Query: 186 DRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLR 243
+ L + + P +YV VRR K L I H DAV+ L++N GL+YS SWDK+LK+WR SD +
Sbjct: 223 EFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSK 282
Query: 244 CLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEK--RHALIATLEKHKSAVN 301
CLESI+AH+DA+N VA ++TGSAD ++VW + K +H L+ L K ++AV
Sbjct: 283 CLESIQAHDDAINTVAAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVT 342
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSA 361
ALA++ V++ G+ D ++ W+ + +H G LRGH A+LCL L++SG A
Sbjct: 343 ALAVNITAAVVYCGSSDGTVNFWEGQKYLSH---GGTLRGHRLAVLCLAAAGSLVLSGGA 399
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN----GVVS--VFSGSLDGEI 415
D+ + +W+R DG CL+VL H PVK LTAV ++G+ G V+SGSLD +
Sbjct: 400 DKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLDKSV 459
Query: 416 RAWQVSVS 423
+ W+V+ S
Sbjct: 460 KVWRVTES 467
Score = 138 (53.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 213 DAVTGLAVN--NGLIYSVSWDKSLKIWRASD-LRCLESIKAHEDAVNAVAVSAGGTVYTG 269
+AVT LAVN ++Y S D ++ W L +++ H AV +A +AG V +G
Sbjct: 339 NAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLA-AAGSLVLSG 397
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL-ALSDDGT----------VLFSGACD 318
AD+ I VW + + H+ ++ L H V L A+ DDG +++SG+ D
Sbjct: 398 GADKNICVWRRN-GDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLD 456
Query: 319 RSILVWDREDSANHMV 334
+S+ VW +SA+ ++
Sbjct: 457 KSVKVWRVTESASTVI 472
Score = 39 (18.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 143 GSVKSVTFCDGKIFTAHQDCKIRVWQ 168
G V S+ +FT IRVW+
Sbjct: 139 GHVYSLAASGDLLFTGSDSKNIRVWK 164
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 123/312 (39%), Positives = 177/312 (56%)
Query: 129 WTSINTFNDNDSSSGSVKSVTFC-DGKIFTAHQDCKIRVWQXXXXXXXXXXXXXX--XVN 185
W + F+ S+SG VK++ D ++FT HQD KIRVW+ +
Sbjct: 159 WKDLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQDGKIRVWRGSKKNPEKYSRVGSLPTLK 218
Query: 186 DRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLR 243
+ L + + P +YV VRR K L I H DAV+ L++N GL+YS SWDK+LK+WR SD +
Sbjct: 219 EFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSK 278
Query: 244 CLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFN--EKRHALIATLEKHKSAVN 301
CLESI+AH+DAVN V V+TGSAD ++VW + E +H L+ L K ++AV
Sbjct: 279 CLESIEAHDDAVNTVVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVT 338
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSA 361
ALA++ V++ G+ D ++ W+R+ H G + GH A+LCL LL+SG A
Sbjct: 339 ALAVNLTDAVVYCGSSDGTVNFWERQKYLTHK---GTIHGHRMAVLCLATAGSLLLSGGA 395
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE------EGQNGVVS------VFSG 409
D+ + +W+R DG CL+VL H PVK L AV E +G +G V+SG
Sbjct: 396 DKNICVWKRNGDGSHTCLSVLMDHEGPVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSG 455
Query: 410 SLDGEIRAWQVS 421
SLD ++ W+V+
Sbjct: 456 SLDNSVKVWRVT 467
Score = 111 (44.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 342 HGKAILCL-INV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H A+ CL +N GLL SGS D+T+++W R SD + CL +E H V ++ + ++
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVW-RLSDSK--CLESIEAHDDAVNTVVSGFDD- 299
Query: 400 QNGVVSVFSGSLDGEIRAWQVSV 422
VF+GS DG ++ W+ V
Sbjct: 300 -----LVFTGSADGTLKVWKREV 317
Score = 108 (43.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 215 VTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRK 274
V LA + L+++ S K++++W+ DL+ K+ V A+ V+ V+TG D K
Sbjct: 137 VYSLAASGDLLFTGSDSKNIRVWK--DLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQDGK 194
Query: 275 IRVW-AKPFNEKRHALIATL 293
IRVW N ++++ + +L
Sbjct: 195 IRVWRGSKKNPEKYSRVGSL 214
Score = 68 (29.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 247 SIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
++ E V ++A S G ++TGS + IRVW K + + + V A+ ++
Sbjct: 129 TVVRQEGHVYSLAAS-GDLLFTGSDSKNIRVW-KDLKD-----FSGFKSTSGFVKAIVVT 181
Query: 307 DDGTVLFSGACDRSILVW 324
D V F+G D I VW
Sbjct: 182 RDNRV-FTGHQDGKIRVW 198
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 138/361 (38%), Positives = 202/361 (55%)
Query: 77 DETINFSSASHLCINSV-QLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTF 135
D T +S L V + GH I +A ++ LY S N Y R W ++N F
Sbjct: 5 DLTRGYSDGDSLVGEIVREEGH---IYSLAATNDLLYTGSD---NNYIRV---WKNLNEF 55
Query: 136 NDNDSSSGSVKSVTFC-DGKIFTAHQDCKIRVWQXXXXXXXXXXXXXX--XVNDRLLRFM 192
+ S+SG VK++ + K+FT HQD KIRVW+ + D L +
Sbjct: 56 SGFKSNSGLVKAIVISREAKVFTGHQDGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSV 115
Query: 193 LPNSYVTVRRHKKKLWIEHGDAVT--GLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKA 250
P++YV VRR + LWI+H DAV+ LA + GL+YS SWD+++K+WR DL+C+ESIKA
Sbjct: 116 KPSNYVEVRRCRTALWIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKA 175
Query: 251 HEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR--HALIATLEKHKSAVNALALSDD 308
H+DAVN+V +A V+TGSAD ++VW + KR H+L TL K +SAV AL S
Sbjct: 176 HDDAVNSVT-TAESLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSH- 233
Query: 309 GTVLFSGACDRSILVWDREDSA--NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVR 366
++SG+ D ++ W+ D H V + H A+LC+ LL SG+AD+ +
Sbjct: 234 -MAVYSGSSDGAVNFWEMGDKKLLKHCEV---FKKHRLAVLCIAAAGKLLFSGAADKKIC 289
Query: 367 IWQRGSDGRFG-CLAVLEGHTKPVKSLTAVT------EEGQNGVVSVFSGSLDGEIRAWQ 419
+W+R +G+ C++VL GHT PVK L V E+G +G + ++SGSLD ++ W+
Sbjct: 290 VWRR--EGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWR 347
Query: 420 V 420
V
Sbjct: 348 V 348
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 144/384 (37%), Positives = 208/384 (54%)
Query: 73 KLSPDETINFSS--ASHLCINSV--QLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT 128
K++ D T S+ + ++ + S+ + GH I +A + LY S + N+
Sbjct: 72 KVTTDTTKEKSTNHSPNILLGSLVREEGH---IYSLATSGDLLYTGSDSK-NI-----RV 122
Query: 129 WTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVN--D 186
W + F+ S+SG VK++ KIFT HQD KIRVW+ N D
Sbjct: 123 WKNHVEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHRRVGTMPNLLD 182
Query: 187 RLLRFMLPNSYVT-VRRHKKK--LWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASD 241
+ ++P+SY RR++ L H DA++ LA++ L+YS SWDK+ K+WR SD
Sbjct: 183 YIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSD 242
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEK--RHALIATLEKHKSA 299
LRC+ES+ AHEDAVNAV G V+TGSAD ++VW + K +H TL K A
Sbjct: 243 LRCVESVNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCA 302
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V A+A+ T+++ G+ D ++ W+RE N+M G L+GH A+LCL+ L+ SG
Sbjct: 303 VTAIAVDQSATLVYCGSSDGTVNFWERE---NNMKNGGVLKGHKLAVLCLVAAGNLMFSG 359
Query: 360 SADRTVRIWQRGSDG-RFGCLAVLEGHTKPVKSLTAVTEEGQNGVVS-----VFSGSLDG 413
SAD +R+W+R G CL+VL GH PVK L AV E Q V V+SGSLD
Sbjct: 360 SADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCL-AV-ERDQESVSGERRWIVYSGSLDR 417
Query: 414 EIRAWQVSVSCPNSSPLNLQKWNL 437
++ W+VS S P P+ Q++ L
Sbjct: 418 SVKMWRVSESSP---PMVNQEFKL 438
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 125/347 (36%), Positives = 191/347 (55%)
Query: 92 SVQLGHKLPIGCIAVHHNFLYAASS-HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTF 150
+V H + +A+ FL +AS +I V+ + + F GSVK++
Sbjct: 55 AVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQQP-----DLKIFAKFGQGDGSVKALVS 109
Query: 151 CDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXV---NDRLLRFMLPNSYVTVRRHKKKL 207
K+FTAHQD +IRVW+ + D L +FM ++YV RR+ K+L
Sbjct: 110 VGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRL 169
Query: 208 WIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY 267
WIEH D+++ LAV+ G+IYS SWDK+LK+WR SDL+CLESIKAH+DA+N + V+ G VY
Sbjct: 170 WIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGRVY 228
Query: 268 TGSADRKIRVWAKPFNEK----------RHALIATLE-KHKSAVNALALSDDGTVLFSGA 316
+ SAD K+++W K ++ H L ATLE + + +VN++ +S DG ++ G
Sbjct: 229 SASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGG 288
Query: 317 CDRSILVWDREDSANHMVV--TG-ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSD 373
D ++ W++++ G RGH A+LC+ V ++ SGSAD+++ +W+R
Sbjct: 289 SDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVT 348
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
G V+ GH PVK L A G + ++SG LD +R W V
Sbjct: 349 GMLCKFGVIHGHEGPVKCLQASPNNVGAGFM-LYSGGLDKSLRVWWV 394
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 251 HEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
H D+++ +AV AG +Y+GS D+ ++VW ++ + + +++ H A+N L ++ DG
Sbjct: 173 HADSISCLAVHAG-IIYSGSWDKTLKVWR--LSDLK--CLESIKAHDDAINGL-VAGDGR 226
Query: 311 VLFSGACDRSILVWDRE----------DSANHMVVTGALRGHGKAILCLINVAG---LLM 357
V +S + D + +W +E S++ V+ L G + + + V+G +
Sbjct: 227 V-YSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVY 285
Query: 358 SGSADRTVRIWQRGS-DGRFGCLAV---LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDG 413
G +D V W++ +G F + GH V + V E V SGS D
Sbjct: 286 GGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGE-------MVCSGSADK 338
Query: 414 EIRAWQVSVS 423
I W+ V+
Sbjct: 339 SIGLWRREVT 348
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 122/346 (35%), Positives = 191/346 (55%)
Query: 101 IGCIAVHHNFLYA-ASSHEINVYDRTGT----TWTSINTFNDNDSSSGSVKSVTFCDGKI 155
IG I +Y+ A+S ++ +Y + + W ++ SSSG +K++ +I
Sbjct: 118 IGSIVRKEGHIYSLAASGDL-LYTGSDSKNIRVWKNLKEHAGFKSSSGLIKAIVIFGDRI 176
Query: 156 FTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDR-LLRFML-PNSYVTVRRHKKKLWIEHGD 213
FT HQD KIR+W+ + +++ + P ++ VRR++ + +H D
Sbjct: 177 FTGHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHND 236
Query: 214 AVTGLA--VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA 271
AV+ L+ V GL+YS SWD ++K+WR +D +CLESI AH+DA+N+V V+TGSA
Sbjct: 237 AVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSA 296
Query: 272 DRKIRVWAKPFNEK--RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
D ++VW + K +H L L K ++AV ALA+ ++++ G+ D + W+R
Sbjct: 297 DGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWER--- 353
Query: 330 ANHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRG-SDGRFGCLAVLEGHTK 387
+ G L+GH A+LCL +AG LL+SGSAD+ + +W+R SD CL+VL GH
Sbjct: 354 SKRSFTGGILKGHKSAVLCL-GIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMG 412
Query: 388 PVKSLTAVTEE-----GQNGVVS-------VFSGSLDGEIRAWQVS 421
PVK L AV EE G V+ ++SGSLD ++ W+VS
Sbjct: 413 PVKCL-AVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVS 457
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 237 (88.5 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 60/183 (32%), Positives = 98/183 (53%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + N+ ++S S D S+K+W LRC+ +++ H+ V+ V ++ +++GS
Sbjct: 501 HEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN-DKYLFSGS 559
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED-S 329
+D+ I+VW E ++ TLE H AV L +S G LFSG+ D++I VWD +
Sbjct: 560 SDKTIKVWDLKTLECKY----TLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFR 613
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
N+ L+GH K + + + L SGS D+T+R+W S C A L GH + V
Sbjct: 614 CNY-----TLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKS---LECSATLRGHDRWV 665
Query: 390 KSL 392
+ +
Sbjct: 666 EHM 668
Score = 227 (85.0 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 64/208 (30%), Positives = 106/208 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + +N+ ++S S DK++K+W L C ++++H AV + +S G +++GS
Sbjct: 541 HDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS-GQYLFSGS 599
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ I+VW + K TL+ H V + + GT L+SG+ D++I VW+ +
Sbjct: 600 NDKTIKVW----DLKTFRCNYTLKGHTKWVTTICIL--GTNLYSGSYDKTIRVWNLKS-- 651
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ + LRGH + + ++ LL + S D T++IW + C LEGH V+
Sbjct: 652 --LECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLET---LRCNTTLEGHNATVQ 706
Query: 391 SLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
L AV E+ + V S S D IR W
Sbjct: 707 CL-AVWEDKK----CVISCSHDQSIRVW 729
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 61/258 (23%), Positives = 112/258 (43%)
Query: 81 NFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASS-HEINVYDRTGTTWTSINTFNDND 139
++ S + C+ +++ GH+ P+ I + +L++ SS H I V+D I T +D
Sbjct: 486 DYKSQNMECVQTLK-GHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLR--CIFTLEGHD 542
Query: 140 SSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYVT 199
V +V D +F+ D I+VW L + Y+
Sbjct: 543 KP---VHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLC---ISGQYLF 596
Query: 200 VRRHKK--KLW-IE----------HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLE 246
+ K K+W ++ H VT + + +YS S+DK++++W L C
Sbjct: 597 SGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSA 656
Query: 247 SIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
+++ H+ V + + ++T S D I++W + + TLE H + V LA+
Sbjct: 657 TLRGHDRWVEHMVI-CDKLLFTASDDNTIKIW----DLETLRCNTTLEGHNATVQCLAVW 711
Query: 307 DDGTVLFSGACDRSILVW 324
+D + S + D+SI VW
Sbjct: 712 EDKKCVISCSHDQSIRVW 729
Score = 169 (64.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K ++ K+ I TLE H V+ + L+D LFSG+ D++I VWD + + L
Sbjct: 525 KVWDLKKLRCIFTLEGHDKPVHTVLLNDK--YLFSGSSDKTIKVWDLKT----LECKYTL 578
Query: 340 RGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H +A+ L L SGS D+T+++W + F C L+GHTK V ++ + G
Sbjct: 579 ESHARAVKTLCISGQYLFSGSNDKTIKVWDLKT---FRCNYTLKGHTKWVTTICIL---G 632
Query: 400 QNGVVSVFSGSLDGEIRAWQV-SVSC 424
N ++SGS D IR W + S+ C
Sbjct: 633 TN----LYSGSYDKTIRVWNLKSLEC 654
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
++ +E+IK + V + ++TG +D IRV+ + + + TL+ H+ V
Sbjct: 451 IKLIETIKGYH--VTSHLCICDNLLFTGCSDNSIRVY--DYKSQNMECVQTLKGHEGPVE 506
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSA 361
++ +D LFSG+ D SI VWD + + T L GH K + ++ L SGS+
Sbjct: 507 SICYNDQ--YLFSGSSDHSIKVWDLKKL--RCIFT--LEGHDKPVHTVLLNDKYLFSGSS 560
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
D+T+++W + C LE H + VK+L
Sbjct: 561 DKTIKVWDLKT---LECKYTLESHARAVKTL 588
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 46/146 (31%), Positives = 70/146 (47%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ TL+ H+ V ++ +D LFSG+ D SI VWD + + T L GH K + +
Sbjct: 495 VQTLKGHEGPVESICYNDQ--YLFSGSSDHSIKVWDLKKL--RCIFT--LEGHDKPVHTV 548
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
+ L SGS+D+T+++W + C LE H + VK+L GQ +FSG
Sbjct: 549 LLNDKYLFSGSSDKTIKVWDLKT---LECKYTLESHARAVKTLCI---SGQY----LFSG 598
Query: 410 SLDGEIRAWQVSVSCPNSSPLNLQKW 435
S D I+ W + N + KW
Sbjct: 599 SNDKTIKVWDLKTFRCNYTLKGHTKW 624
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 289 LIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
LI T++ + + L + D+ +LF+G D SI V+D + V T L+GH +
Sbjct: 453 LIETIKGYH-VTSHLCICDN--LLFTGCSDNSIRVYDYKSQNMECVQT--LKGHEGPVES 507
Query: 349 LINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
+ L SGS+D ++++W + C+ LEGH KPV T + + +FS
Sbjct: 508 ICYNDQYLFSGSSDHSIKVWDLK---KLRCIFTLEGHDKPVH--TVLLNDKY-----LFS 557
Query: 409 GSLDGEIRAWQV-SVSC 424
GS D I+ W + ++ C
Sbjct: 558 GSSDKTIKVWDLKTLEC 574
Score = 41 (19.5 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 151 CDGKIFTAHQDCKIRVW 167
CD +FT D IRV+
Sbjct: 469 CDNLLFTGCSDNSIRVY 485
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 231 (86.4 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 69/217 (31%), Positives = 113/217 (52%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VY 267
H D+VTGLAV G ++S S+D+++ IW D + + K H+D V A+ + GT
Sbjct: 523 HQDSVTGLAVGGGFLFSSSYDRTILIWSLKDFSHVHTFKGHQDKVMAL-IHIEGTEPVCV 581
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHK---SAVNALALSDDGTVLFSGACDRSILVW 324
+G I VW+ F + L E + ++ALA S+ G V ++G+ D +I W
Sbjct: 582 SGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYSEYGHV-YTGSGDNTIKAW 640
Query: 325 DREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+D + ++ T + GH + L+ V G+L SGS D TVR+W SD L VL G
Sbjct: 641 SLQDGS--LLCT--MSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSL-SDNSL--LTVL-G 692
Query: 385 HTKP--VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
P V+S+ ++ + Q +V+ + +G+I+ W+
Sbjct: 693 EETPGIVRSILSLAADDQT-LVAAYQ---NGDIQIWR 725
Score = 155 (59.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 57/184 (30%), Positives = 84/184 (45%)
Query: 246 ESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWA-KPFNEKRHALIATLEKHKSAVNALA 304
+ ++ H+D+V +AV GG +++ S DR I +W+ K F+ H + T + H+ V AL
Sbjct: 518 KDMRGHQDSVTGLAVG-GGFLFSSSYDRTILIWSLKDFS---H--VHTFKGHQDKVMAL- 570
Query: 305 LSDDGT--VLFSGACDRSILVWD-----REDSANHMVVTGALRGHGKAILCLINVAGLLM 357
+ +GT V SG I VW E R G L G +
Sbjct: 571 IHIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYSEY-GHVY 629
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
+GS D T++ W DG C + GH V +L V NGV+ +SGS DG +R
Sbjct: 630 TGSGDNTIKAWSL-QDGSLLC--TMSGHKSVVSTLVVV-----NGVL--YSGSWDGTVRL 679
Query: 418 WQVS 421
W +S
Sbjct: 680 WSLS 683
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 44/167 (26%), Positives = 85/167 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAV--NAVAVSAGG-TVY 267
H V+ L V NG++YS SWD ++++W SD L + + + ++++A T+
Sbjct: 654 HKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLV 713
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR- 326
+ I++W + L+ +++ A+ ++A++ G LF+G D++I V +
Sbjct: 714 AAYQNGDIQIW------RDDTLMKSMKIQNGAILSIAVN--GKWLFTGGWDKTINVQELS 765
Query: 327 --EDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRG 371
E S N V G++ G I L+ G L +G AD+T++++ G
Sbjct: 766 GDEISVNCAHV-GSIPG-SSVITSLLYWEGKLFAGFADKTIKVYYFG 810
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 226 (84.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 70/237 (29%), Positives = 120/237 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR--CLESIKAH 251
SYV +R +K + + V L ++ L +++ D ++IW + + + S++ H
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEHH 73
Query: 252 EDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 TDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDKE 129
Query: 311 VLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADR 363
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS ++
Sbjct: 130 LVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEK 189
Query: 364 TVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+R+W + + L L+GHT VKSL + +G SGS DG IR W +
Sbjct: 190 VLRVWDPRTCAK---LMKLKGHTDNVKSLL-LNRDG----TQCLSGSSDGTIRLWSL 238
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 64/227 (28%), Positives = 107/227 (47%)
Query: 197 YVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVN 256
Y+ H W+ D V L N + S S D ++K+W A C+ +++ H+D V
Sbjct: 66 YIASMEHHTD-WVN--DIV--LCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK 120
Query: 257 AVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALSDDGT 310
A+A + V + DR+I +W + + ++L +K ++ +LA++ GT
Sbjct: 121 ALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT 180
Query: 311 VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRTVRIW 368
V+ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T+R+W
Sbjct: 181 VIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLW 236
Query: 369 QRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
G C+A H + V +L V E V+SG D +I
Sbjct: 237 SLGQQR---CIATYRVHDEGVWALQ-VNE----AFTHVYSGGRDRKI 275
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V ++ ++ GT +G
Sbjct: 168 DSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSG 227
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL +++ T ++SG DR I D
Sbjct: 228 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTD 279
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 67/213 (31%), Positives = 107/213 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H +V L +N +I S S D ++++W C++++ H +AV + A G + T S
Sbjct: 261 HTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIMVTCS 319
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
DR I VW + + + L H++AVN + D V SG DR+I VW S
Sbjct: 320 KDRSIAVWDM-VSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG--DRTIKVW----SM 372
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ + L GH + I CL L++SGS+D T+R+W S CL VLEGH + V+
Sbjct: 373 DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGV---CLRVLEGHEELVR 429
Query: 391 SLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
+ +E + + SG+ DG+I+ W + +
Sbjct: 430 CIRF--DEKR-----IVSGAYDGKIKVWDLQAA 455
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D ++KIW D C + H +V + + +G
Sbjct: 220 ENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD-NRVIISG 278
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E I TL H AV L ++ ++ + + DRSI VWD S
Sbjct: 279 SSDATVRVWDVETGE----CIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMV-S 331
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + L GH A+ + ++S S DRT+++W + + L GH + +
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGI 388
Query: 390 KSL 392
L
Sbjct: 389 ACL 391
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNA 257
+T+RR + + H AV + ++ I S S D+++K+W L + ++ H + A
Sbjct: 335 ITIRR----VLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI-A 389
Query: 258 VAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGAC 317
G V +GS+D IR+W + + LE H+ V + + V SGA
Sbjct: 390 CLQYRGRLVVSGSSDNTIRLW----DIHSGVCLRVLEGHEELVRCIRFDEKRIV--SGAY 443
Query: 318 DRSILVWDREDSANHMVVTG-----ALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
D I VWD + + + ++ +L H + L ++S S D T+ IW
Sbjct: 444 DGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 46/144 (31%), Positives = 65/144 (45%)
Query: 278 WAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
W K N K + E K V L DD V SG D +I +WDR+D + +
Sbjct: 205 W-KRGNYKMTRINCQSENSKG-VYCLQYDDDKIV--SGLRDNTIKIWDRKDYSCSRI--- 257
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVT 396
L GH ++LCL +++SGS+D TVR+W D G C+ L H + V L
Sbjct: 258 -LSGHTGSVLCLQYDNRVIISGSSDATVRVW----DVETGECIKTLIHHCEAVLHLRFA- 311
Query: 397 EEGQNGVVSVFSGSLDGEIRAWQV 420
NG++ + S D I W +
Sbjct: 312 ----NGIM--VTCSKDRSIAVWDM 329
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 225 (84.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 67/213 (31%), Positives = 107/213 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H +V L +N +I S S D ++++W C++++ H +AV + A G + T S
Sbjct: 261 HTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIMVTCS 319
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
DR I VW + + + L H++AVN + D V SG DR+I VW S
Sbjct: 320 KDRSIAVWDM-VSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG--DRTIKVW----SM 372
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ + L GH + I CL L++SGS+D T+R+W S CL VLEGH + V+
Sbjct: 373 DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGV---CLRVLEGHEELVR 429
Query: 391 SLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
+ +E + + SG+ DG+I+ W + +
Sbjct: 430 CIRF--DEKR-----IVSGAYDGKIKVWDLQAA 455
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D ++KIW D C + H +V + + +G
Sbjct: 220 ENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD-NRVIISG 278
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E I TL H AV L ++ ++ + + DRSI VWD S
Sbjct: 279 SSDATVRVWDVETGE----CIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMV-S 331
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + L GH A+ + ++S S DRT+++W + + L GH + +
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGI 388
Query: 390 KSL 392
L
Sbjct: 389 ACL 391
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNA 257
+T+RR + + H AV + ++ I S S D+++K+W L + ++ H + A
Sbjct: 335 ITIRR----VLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI-A 389
Query: 258 VAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGAC 317
G V +GS+D IR+W + + LE H+ V + + V SGA
Sbjct: 390 CLQYRGRLVVSGSSDNTIRLW----DIHSGVCLRVLEGHEELVRCIRFDEKRIV--SGAY 443
Query: 318 DRSILVWDREDSANHMVVTG-----ALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
D I VWD + + + ++ +L H + L ++S S D T+ IW
Sbjct: 444 DGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 46/144 (31%), Positives = 65/144 (45%)
Query: 278 WAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
W K N K + E K V L DD V SG D +I +WDR+D + +
Sbjct: 205 W-KRGNYKMTRINCQSENSKG-VYCLQYDDDKIV--SGLRDNTIKIWDRKDYSCSRI--- 257
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVT 396
L GH ++LCL +++SGS+D TVR+W D G C+ L H + V L
Sbjct: 258 -LSGHTGSVLCLQYDNRVIISGSSDATVRVW----DVETGECIKTLIHHCEAVLHLRFA- 311
Query: 397 EEGQNGVVSVFSGSLDGEIRAWQV 420
NG++ + S D I W +
Sbjct: 312 ----NGIM--VTCSKDRSIAVWDM 329
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 217 (81.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 65/215 (30%), Positives = 111/215 (51%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY--TGSADRKIRVWA 279
N LI + S DK++++W A+ C+ H + AVA + + +GS DR ++VW+
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 280 ---------KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
+P N K +++A H +N++A++ + +++ +G+ DR+ +W D
Sbjct: 476 LDGISEDSEEPINLKTRSVVAA---HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLV 532
Query: 331 NHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ VVT L+GH + I + V +M+ S D+TV+IW SDG CL EGHT
Sbjct: 533 H--VVT--LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI-SDG--SCLKTFEGHTSS 585
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
V + +T+ G V G+ DG ++ W V+ S
Sbjct: 586 VLRASFITD----GTQFVSCGA-DGLLKLWNVNTS 615
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 59/215 (27%), Positives = 93/215 (43%)
Query: 206 KLWIE-HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K IE D +T LA++ + L++S + +++W L+C+ S K HE V +A A
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 263 -GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT--VLFSGACDR 319
GG + T ADRK+ VW H HK V+++ D +L SG+ D
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCTHYF----RGHKGVVSSILFHPDSNKNILISGSDDA 168
Query: 320 SILVWDREDSANHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFG 377
++ VWD + H A+ + ++ GL L S D+ V +W +
Sbjct: 169 TVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD---YS 225
Query: 378 CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
C A + + + L AVT + F SLD
Sbjct: 226 CKATVATY----EVLEAVTTVSSGTPFASFVASLD 256
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/133 (32%), Positives = 63/133 (47%)
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
+T+E + ALALS D +LFS R I VWD E + + +GH ++ +
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET----LKCIRSWKGHEGPVMGMA 109
Query: 351 NVA--GLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
A GLL + ADR V +W DG F C GH V S+ + +N ++S
Sbjct: 110 CHASGGLLATAGADRKVLVWD--VDGGF-CTHYFRGHKGVVSSILFHPDSNKNILIS--- 163
Query: 409 GSLDGEIRAWQVS 421
GS D +R W ++
Sbjct: 164 GSDDATVRVWDLN 176
Score = 133 (51.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAV--AVSAGGTVY--TGSADRKIRVWAKPFNEKRH 287
+ ++++ + + C + H++ V ++ VS+ G V TGS D+ +R+W N
Sbjct: 381 EEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLW----NATSK 436
Query: 288 ALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWD----REDSAN--HMVVTGALR 340
+ I H + A+A + F SG+ DR++ VW EDS ++ +
Sbjct: 437 SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVA 496
Query: 341 GHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
H K I + + L+ +GS DRT IW R D + L+GH + + S+ T +
Sbjct: 497 AHDKDINSVAVARNDSLVCTGSEDRTASIW-RLPD--LVHVVTLKGHKRRIFSVEFSTVD 553
Query: 399 GQNGVVSVFSGSLDGEIRAWQVSV-SC 424
V + S D ++ W +S SC
Sbjct: 554 Q-----CVMTASGDKTVKIWAISDGSC 575
Score = 131 (51.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNA 257
VT++ HK++++ +V V+ + + S DK++KIW SD CL++ + H +V
Sbjct: 535 VTLKGHKRRIF-----SVEFSTVDQ-CVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLR 588
Query: 258 VAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGA 316
+ GT + AD +++W N IAT ++H+ V ALA+ ++ +G
Sbjct: 589 ASFITDGTQFVSCGADGLLKLW----NVNTSECIATYDQHEDKVWALAVGKKTEMIATGG 644
Query: 317 CDRSILVW 324
D I +W
Sbjct: 645 GDAVINLW 652
Score = 128 (50.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 211 HGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVY 267
H + +AV N+ L+ + S D++ IWR DL + ++K H+ + +V S V
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
T S D+ +++WA ++ + + T E H S+V + DGT S D + +W+
Sbjct: 558 TASGDKTVKIWA--ISDG--SCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
S + T L + ++ +G D + +W
Sbjct: 614 TS--ECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 54 (24.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 109 NFLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVW 167
+F+ A IN+ D T + S+ + + +S + + +++ D +F+A +IRVW
Sbjct: 32 SFIACACGDVINIVDSTDS---SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVW 87
Score = 40 (19.1 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 78 ETINFSSASHLCINSVQLGHKLPIGCIAVHHN--FLYAAS-SHEINVYDRTGTTWTSINT 134
+ IN ++ + S G + +A+ + L++A S +I V+D T I +
Sbjct: 40 DVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE--TLKCIRS 97
Query: 135 FNDNDSSSGSVKSVTFCD---GKIFTAHQDCKIRVW 167
+ ++ G V + C G + TA D K+ VW
Sbjct: 98 WKGHE---GPVMGMA-CHASGGLLATAGADRKVLVW 129
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 224 (83.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 70/238 (29%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIILCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VKSL + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKSLL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 200 (75.5 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 65/231 (28%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTG--LAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V L N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GTV+ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QTGTVIISGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKSLLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L V E ++SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQ-VNE----AFTHIYSGGRDRKI 276
Score = 134 (52.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V ++ ++ GT +G
Sbjct: 169 DSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL +++ T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 221 (82.9 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 62/199 (31%), Positives = 101/199 (50%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE 284
I S S D+++K+W D L +++ H V +A+ AG + TGS D +RVW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-AGSILVTGSRDTTLRVW--DVES 367
Query: 285 KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGK 344
RH +ATL H +AV + DGT + SG D ++ +W+ + T L GH
Sbjct: 368 GRH--LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAH--TGRCIRT--LTGHNN 419
Query: 345 AILCLI--NVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ L+ + ++ SGS D ++R+W +G+ C+A+L+GHT SLT+ + N
Sbjct: 420 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ-ECVALLQGHT----SLTSGMQLRGN 474
Query: 402 GVVSVFSGSLDGEIRAWQV 420
+VS + D +R W +
Sbjct: 475 ILVSC---NADSHVRVWDI 490
Score = 208 (78.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 57/189 (30%), Positives = 97/189 (51%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYT 268
H D +T + +++ ++ + S D +LK+W + ++ H V +S G + +
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVS 313
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GS DR ++VW+ +L+ TL+ H S V +A++ G++L +G+ D ++ VWD E
Sbjct: 314 GSTDRTVKVWSTVDG----SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVE- 366
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
S H+ L GH A+ C+ ++SG D TV+IW + GR C+ L GH
Sbjct: 367 SGRHLAT---LHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHT-GR--CIRTLTGHNNR 420
Query: 389 VKSLTAVTE 397
V SL +E
Sbjct: 421 VYSLLFESE 429
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V +A+ ++ + S D +L++W R L ++ H AV V G TV +G
Sbjct: 337 HTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD-GTTVVSGG 395
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D +++W N I TL H + V +L + +++ SG+ D SI VWD
Sbjct: 396 YDFTVKIW----NAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 331 NHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L+GH ++ + + G +L+S +AD VR+W +G C+ +L GH +
Sbjct: 452 GQECVA-LLQGH-TSLTSGMQLRGNILVSCNADSHVRVWDI-HEGT--CVHMLSGHRSAI 506
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
SL G+N V + S DG ++ W +
Sbjct: 507 TSLQWF---GRNMVAT---SSDDGTVKLWDI 531
Score = 191 (72.3 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 55/188 (29%), Positives = 84/188 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
DK K W A+ + ++ HED V + TGS D ++VW E + L+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
H V +S G + SG+ DR++ VW D + + L+GH + C+
Sbjct: 294 G----HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS----LLHTLQGHTSTVRCMA 345
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGS 410
+L++GS D T+R+W S GR LA L GH V+ V +G +V SG
Sbjct: 346 MAGSILVTGSRDTTLRVWDVES-GRH--LATLHGHHAAVR---CVQFDG----TTVVSGG 395
Query: 411 LDGEIRAW 418
D ++ W
Sbjct: 396 YDFTVKIW 403
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 221 (82.9 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 62/199 (31%), Positives = 101/199 (50%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE 284
I S S D+++K+W D L +++ H V +A+ AG + TGS D +RVW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-AGSILVTGSRDTTLRVW--DVES 367
Query: 285 KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGK 344
RH +ATL H +AV + DGT + SG D ++ +W+ + T L GH
Sbjct: 368 GRH--LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAH--TGRCIRT--LTGHNN 419
Query: 345 AILCLI--NVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ L+ + ++ SGS D ++R+W +G+ C+A+L+GHT SLT+ + N
Sbjct: 420 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ-ECVALLQGHT----SLTSGMQLRGN 474
Query: 402 GVVSVFSGSLDGEIRAWQV 420
+VS + D +R W +
Sbjct: 475 ILVSC---NADSHVRVWDI 490
Score = 208 (78.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 57/189 (30%), Positives = 97/189 (51%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYT 268
H D +T + +++ ++ + S D +LK+W + ++ H V +S G + +
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVS 313
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GS DR ++VW+ +L+ TL+ H S V +A++ G++L +G+ D ++ VWD E
Sbjct: 314 GSTDRTVKVWSTVDG----SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVE- 366
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
S H+ L GH A+ C+ ++SG D TV+IW + GR C+ L GH
Sbjct: 367 SGRHLAT---LHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHT-GR--CIRTLTGHNNR 420
Query: 389 VKSLTAVTE 397
V SL +E
Sbjct: 421 VYSLLFESE 429
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V +A+ ++ + S D +L++W R L ++ H AV V G TV +G
Sbjct: 337 HTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD-GTTVVSGG 395
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D +++W N I TL H + V +L + +++ SG+ D SI VWD
Sbjct: 396 YDFTVKIW----NAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 331 NHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L+GH ++ + + G +L+S +AD VR+W +G C+ +L GH +
Sbjct: 452 GQECVA-LLQGH-TSLTSGMQLRGNILVSCNADSHVRVWDI-HEGT--CVHMLSGHRSAI 506
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
SL G+N V + S DG ++ W +
Sbjct: 507 TSLQWF---GRNMVAT---SSDDGTVKLWDI 531
Score = 191 (72.3 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 55/188 (29%), Positives = 84/188 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
DK K W A+ + ++ HED V + TGS D ++VW E + L+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLV 293
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
H V +S G + SG+ DR++ VW D + + L+GH + C+
Sbjct: 294 G----HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS----LLHTLQGHTSTVRCMA 345
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGS 410
+L++GS D T+R+W S GR LA L GH V+ V +G +V SG
Sbjct: 346 MAGSILVTGSRDTTLRVWDVES-GRH--LATLHGHHAAVR---CVQFDG----TTVVSGG 395
Query: 411 LDGEIRAW 418
D ++ W
Sbjct: 396 YDFTVKIW 403
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GT++ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L + V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 141 (54.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 70/238 (29%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN V + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDVVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LHRDG----TQCLSGSSDGTIRLWSL 239
Score = 191 (72.3 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 62/229 (27%), Positives = 109/229 (47%)
Query: 199 TVRRHKKKLWI----EHGDAVTG--LAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V L N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVR 366
GT++ SG+ ++ + VWD A M + G + KA+L L +SGS+D T+R
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHT-DNVKALL-LHRDGTQCLSGSSDGTIR 235
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+W G C+A H + V +L + V+SG D +I
Sbjct: 236 LWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 139 (54.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ + GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 70/238 (29%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN V + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDVVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LHRDG----TQCLSGSSDGTIRLWSL 239
Score = 191 (72.3 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 62/229 (27%), Positives = 109/229 (47%)
Query: 199 TVRRHKKKLWI----EHGDAVTG--LAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V L N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVR 366
GT++ SG+ ++ + VWD A M + G + KA+L L +SGS+D T+R
Sbjct: 178 QLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHT-DNVKALL-LHRDGTQCLSGSSDGTIR 235
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+W G C+A H + V +L + V+SG D +I
Sbjct: 236 LWSLGQQR---CIATYRVHDEGVWALQV-----NDAFTHVYSGGRDRKI 276
Score = 139 (54.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ + GT +G
Sbjct: 169 DSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL ++D T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCAK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 199 (75.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 65/231 (28%), Positives = 112/231 (48%)
Query: 199 TVRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
+V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALS 306
D V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRT 364
GTV+ SG+ ++ + VWD A M L+GH + L+ N G +SGS+D T
Sbjct: 178 QMGTVIVSGSTEKVLRVWDPRTCAKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+R+W G C+A H + V +L V E V+SG D +I
Sbjct: 234 IRLWSLGQQR---CIATYRVHDEGVWALQ-VNE----AFTHVYSGGRDRKI 276
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL +++ T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 218 (81.8 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 72/228 (31%), Positives = 110/228 (48%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 247 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 305
Query: 266 VYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSIL 322
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 306 MVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTIK 359
Query: 323 VWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAV 381
VW S V T L GH + I CL L++SGS+D T+R+W D G CL V
Sbjct: 360 VWST--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRV 411
Query: 382 LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
LEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 412 LEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 452
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 69/230 (30%), Positives = 104/230 (45%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW-RAS--DLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W AS D+ + H AVN V
Sbjct: 290 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKY 348
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 349 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 402
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 403 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 458
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
L H+ V L +E Q + S S D I W ++ P S+P
Sbjct: 459 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSAP 500
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 56/183 (30%), Positives = 83/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 211 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 269
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 270 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 322
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 323 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 379
Query: 390 KSL 392
L
Sbjct: 380 ACL 382
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 233 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 287
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 288 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 344
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 345 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 401
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 402 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 457
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 458 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 490
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 220 (82.5 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 69/238 (28%), Positives = 120/238 (50%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLR---CLESIKA 250
SYV +R +K + + V L ++ L +++ D ++IW + + + S++
Sbjct: 18 SYV-IRDEVEKY---NRNGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEH 73
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H D VN + + G T+ + S+D ++VW N + ++TL HK V ALA + D
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVW----NAHKGFCMSTLRTHKDYVKALAYAKDK 129
Query: 310 TVLFSGACDRSILVWDRED-----SANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
++ S DR I +WD ++N+ V T +L G+ +I L +N G +++SGS +
Sbjct: 130 ELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTE 189
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +R+W + + L L+GHT VK+L + +G SGS DG IR W +
Sbjct: 190 KVLRVWDPRTCQK---LMKLKGHTDNVKALL-LNRDG----TQCLSGSSDGTIRLWSL 239
Score = 199 (75.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 65/230 (28%), Positives = 111/230 (48%)
Query: 200 VRRHKKKLWI----EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
V +HK+ +I H D V + + N + S S D ++K+W A C+ +++ H+D
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKD 118
Query: 254 AVNAVAVSAGGT-VYTGSADRKIRVW----AKPFNEKRHALI-ATLEKHKSAVNALALSD 307
V A+A + V + DR+I +W + + ++L +K ++ +LA++
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 308 DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRTV 365
GTV+ SG+ ++ + VWD M L+GH + L+ N G +SGS+D T+
Sbjct: 179 MGTVIVSGSTEKVLRVWDPRTCQKLM----KLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
R+W G C+A H + V +L V E G V+SG D +I
Sbjct: 235 RLWSLGQQR---CIATYRVHDEGVWALQ-VNE----GFTHVYSGGRDRKI 276
Score = 139 (54.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 40/116 (34%), Positives = 63/116 (54%)
Query: 213 DAVTGLAVNN-G-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTG 269
D++ LA+N G +I S S +K L++W + L +K H D V A+ ++ GT +G
Sbjct: 169 DSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSG 228
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
S+D IR+W+ ++R IAT H V AL +++ T ++SG DR I D
Sbjct: 229 SSDGTIRLWS--LGQQR--CIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTD 280
Score = 43 (20.2 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++FTA +D IR+W
Sbjct: 44 RLFTAGRDSIIRIW 57
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 219 (82.2 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 82/292 (28%), Positives = 136/292 (46%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 393 VGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 448
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 449 GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 508
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L + +YS S+ +++KIW +L C+ ++ +V ++
Sbjct: 509 ELKLKKELTGLNHW--VRALVASQNYLYSGSY-QTIKIWDIRNLECVHVLQTSGGSVYSI 565
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 566 AVT-NHHIVCGTYENLIHVWDIETKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 620
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 621 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 154 (59.3 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 368 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTC 426
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 427 TTYKCQKTLEGHDGIVLALCIQ-GNKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 481
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 482 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVASQNYLYSG 536
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW + C+ VL+ V S+ AVT
Sbjct: 537 SY-QTIKIWDIRN---LECVHVLQTSGGSVYSI-AVT 568
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/205 (21%), Positives = 89/205 (43%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W +
Sbjct: 472 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQ 530
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
N SGS +++ D + + +C + V Q + ++
Sbjct: 531 NYLYSGSYQTIKIWDIR----NLEC-VHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 585
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 586 IETKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 644
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 645 SVTALAVSRG-RLFSGAVDSTVKVW 668
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 217 (81.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 71/228 (31%), Positives = 109/228 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + G
Sbjct: 259 KILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRF-CNGL 317
Query: 266 VYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSIL 322
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 318 MVTCSKDRSIAVWDMASPTDISLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTIK 371
Query: 323 VWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAV 381
VW S V T L GH + I CL L++SGS+D T+R+W D G CL V
Sbjct: 372 VWST--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRV 423
Query: 382 LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
LEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 424 LEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 464
Score = 172 (65.6 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 68/225 (30%), Positives = 101/225 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW-RAS--DLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L NGL+ + S D+S+ +W AS D+ + H AVN V
Sbjct: 302 IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFD-DKY 360
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 361 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 414
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 415 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 470
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ-VSVS 423
L H+ V L +E Q + S S D I W ++VS
Sbjct: 471 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDFLNVS 508
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 55/183 (30%), Positives = 81/183 (44%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW L CL+ + H +V + + TG
Sbjct: 223 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDER-VIVTG 281
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L + V S DRSI VWD S
Sbjct: 282 SSDSTVRVWDVNSGE----VLNTLIHHNEAVLHLRFCNGLMVTCSK--DRSIAVWDMA-S 334
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 335 PTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 391
Query: 390 KSL 392
L
Sbjct: 392 ACL 394
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDR 399
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 400 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 325 DREDSANHMVV--TGALRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + + T LR H + L ++S S D T+ IW
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 216 (81.1 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W S L ++ H +AV + G
Sbjct: 259 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRF-CNGL 317
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + +L L H++AVN + D V SG DR+I VW
Sbjct: 318 MVTCSKDRSIAVWDMA-SATDISLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 374
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 375 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 426
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 427 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 464
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 68/230 (29%), Positives = 102/230 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 302 IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFD-DKY 360
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 361 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 414
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 415 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 470
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ-VSVSCPNSS 428
L H+ V L +E Q + S S D I W ++VS S
Sbjct: 471 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDFLNVSSNGQS 513
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 56/183 (30%), Positives = 82/183 (44%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW L CL+ + H +V + + TG
Sbjct: 223 ENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDER-VIVTG 281
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L + V S DRSI VWD S
Sbjct: 282 SSDSTVRVWDVSSGE----VLNTLIHHNEAVLHLRFCNGLMVTCSK--DRSIAVWDMA-S 334
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 335 ATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 391
Query: 390 KSL 392
L
Sbjct: 392 ACL 394
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDR 399
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 400 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 325 DREDSANHMVV--TGALRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + + T LR H + L ++S S D T+ IW
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 215 (80.7 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 225 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 283
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 284 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 340
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 341 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 392
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 393 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 430
Score = 180 (68.4 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 268 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 326
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 327 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 380
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 381 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 436
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 437 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 477
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW S L CL+ + H +V + + TG
Sbjct: 189 ENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER-VIVTG 247
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 248 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 300
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 301 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 357
Query: 390 KSL 392
L
Sbjct: 358 ACL 360
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 62/273 (22%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D++ + T +GSV + + + I T D +RVW
Sbjct: 211 NSIKIWDKSSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 265
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 266 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 322
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 323 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 379
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 380 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 435
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 436 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 468
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 215 (80.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 242 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 300
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 301 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 357
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 358 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 409
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 410 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 447
Score = 180 (68.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 285 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 343
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 344 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 397
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 398 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 453
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 454 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 494
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 206 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 264
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 265 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 317
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 374
Query: 390 KSL 392
L
Sbjct: 375 ACL 377
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 228 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 282
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 283 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 340 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 396
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 397 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 452
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 453 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 485
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 215 (80.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 242 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 300
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 301 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 357
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 358 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 409
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 410 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 447
Score = 180 (68.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 285 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 343
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 344 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 397
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 398 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 453
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 454 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 494
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 206 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 264
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 265 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 317
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 374
Query: 390 KSL 392
L
Sbjct: 375 ACL 377
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 228 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 282
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 283 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 340 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 396
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 397 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 452
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 453 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 485
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 215 (80.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 259 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 317
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 318 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 374
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 375 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 426
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 427 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 464
Score = 180 (68.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 302 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 360
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 361 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 414
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 415 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 470
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 471 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 511
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 58/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW S L CL+ + H +V + + TG
Sbjct: 223 ENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER-VIVTG 281
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 282 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 334
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 335 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 391
Query: 390 KSL 392
L
Sbjct: 392 ACL 394
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 62/273 (22%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D++ + T +GSV + + + I T D +RVW
Sbjct: 245 NSIKIWDKSSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 299
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 300 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 356
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 357 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 413
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 414 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 469
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 470 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 215 (80.7 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 261 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 319
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 320 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 376
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 377 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 428
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 429 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 466
Score = 180 (68.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 304 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 362
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 363 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 416
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 417 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 472
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 473 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 513
Score = 172 (65.6 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 225 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 283
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 284 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 336
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 337 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 393
Query: 390 KSL 392
L
Sbjct: 394 ACL 396
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 247 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 301
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 302 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 358
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 359 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 415
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 416 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 471
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 472 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 504
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 215 (80.7 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 262 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 320
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 321 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 377
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 378 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 429
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 430 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 467
Score = 180 (68.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 305 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 363
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 364 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 417
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 418 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 473
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 474 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 514
Score = 172 (65.6 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 226 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 284
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 285 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 337
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 338 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 394
Query: 390 KSL 392
L
Sbjct: 395 ACL 397
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 248 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 302
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 303 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 359
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 360 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 416
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 417 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 472
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 473 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 505
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 215 (80.7 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 274 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 332
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 333 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 389
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 390 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 441
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 442 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 479
Score = 180 (68.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 317 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 375
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 376 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 429
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 430 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 485
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 486 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 526
Score = 176 (67.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 58/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW S L CL+ + H +V + + TG
Sbjct: 238 ENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER-VIVTG 296
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 297 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 349
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 406
Query: 390 KSL 392
L
Sbjct: 407 ACL 409
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 62/273 (22%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D++ + T +GSV + + + I T D +RVW
Sbjct: 260 NSIKIWDKSSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 315 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 428
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 429 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 485 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 215 (80.7 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 274 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 332
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 333 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 389
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 390 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 441
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 442 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 479
Score = 180 (68.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 317 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 375
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 376 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 429
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 430 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 485
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 486 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 526
Score = 172 (65.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 238 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 296
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 297 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 349
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 406
Query: 390 KSL 392
L
Sbjct: 407 ACL 409
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 260 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 315 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 428
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 429 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 485 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 215 (80.7 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 70/225 (31%), Positives = 107/225 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K+ H +V L + +I + S D ++++W + L ++ H +AV + S G
Sbjct: 274 KVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL 332
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + D V SG DR+I VW
Sbjct: 333 MVTCSKDRSIAVWDMA-SATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWS 389
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D T+R+W D G CL VLEG
Sbjct: 390 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLRVLEG 441
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
H + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 442 HEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 479
Score = 180 (68.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W A+D+ + H AVN V
Sbjct: 317 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKY 375
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 376 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 429
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 430 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 485
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
L H+ V L +E Q + S S D I W ++ P S+
Sbjct: 486 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSA 526
Score = 172 (65.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 238 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 296
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L S+ V S DRSI VWD S
Sbjct: 297 SSDSTVRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA-S 349
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
A + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 406
Query: 390 KSL 392
L
Sbjct: 407 ACL 409
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/273 (23%), Positives = 107/273 (39%)
Query: 117 HEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXX 176
+ I ++D+T + T +GSV + + + I T D +RVW
Sbjct: 260 NSIKIWDKTSLECLKVLT-----GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 177 XXXXXXXVNDRLLRFMLPNSY-VTVRRHKK-KLW--------------IEHGDAVTGLAV 220
N+ +L N VT + + +W + H AV +
Sbjct: 315 TLIHH---NEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAK 280
++ I S S D+++K+W S + ++ H+ + A V +GS+D IR+W
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLW-- 428
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV--TGA 338
+ + A + LE H+ V + D + SGA D I VWD + + + T
Sbjct: 429 --DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Query: 339 LRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
LR H + L ++S S D T+ IW
Sbjct: 485 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 82/292 (28%), Positives = 135/292 (46%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 362 VGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 417
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 418 GNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 477
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L + +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 478 ELKLKKELTGLNHW--VRALVASQNHLYSGSY-QTIKIWDIRSLECVHVLQTSGGSVYSI 534
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 535 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 589
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 590 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 67/217 (30%), Positives = 108/217 (49%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAV-NNG-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DKS+K+W
Sbjct: 337 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTC 395
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 396 TTYKCQKTLEGHDGIVLALCIQ-GNKLYSGSADCTIIVWDIQTLQK----VNTIRAHDNP 450
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 451 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVASQNHLYSG 505
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW S C+ VL+ V S+ AVT
Sbjct: 506 SY-QTIKIWDIRS---LECVHVLQTSGGSVYSI-AVT 537
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/205 (21%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W +
Sbjct: 441 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQ 499
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
N SGS +++ D + +C + V Q + ++
Sbjct: 500 NHLYSGSYQTIKIWDIRSL----EC-VHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 554
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 555 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 613
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 614 SVTALAVSRG-RLFSGAVDSTVKVW 637
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 68/224 (30%), Positives = 111/224 (49%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIW--RASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H ++ +A N+ I++ S D ++K+ R+ + +C+E++ H VN V V+ +++
Sbjct: 911 HRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCV-VANEKYLFS 969
Query: 269 GSADRKIRVW-AKPFNEKRHALIATLEK-HKSAVNALALSDDGTVLFSGACDRSILVWDR 326
S D+ I+VW F E I + E H + LALS G LFSG D+ I VWD
Sbjct: 970 CSYDKTIKVWDLSTFKE-----IKSFEGVHTKYIKTLALS--GRYLFSGGNDQIIYVWDT 1022
Query: 327 EDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
E + M+ ++GH +L L A L S S D ++IW + F C+ L+GH
Sbjct: 1023 ETLS--MLFN--MQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSN---FSCIDTLKGHW 1075
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV-SVSCPNSSP 429
V S V ++ ++SGS D I+ W + ++ C + P
Sbjct: 1076 NSVSS--CVVKDRY-----LYSGSEDNSIKVWDLDTLECVYTIP 1112
Score = 157 (60.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 65/251 (25%), Positives = 110/251 (43%)
Query: 89 CINSVQLGHKLPIGCIAVHHNFLYAAS-SHEINVYD-RTGTTWTSINTFNDNDSSSGSVK 146
C+ +V GH+ I IA + N+++ +S + I V+ R+G T I T + +G V
Sbjct: 904 CLYTVN-GHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNT-KCIETLVGH---TGEVN 958
Query: 147 SVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLL----RFMLPNS-----Y 197
V + +F+ D I+VW + L R++ Y
Sbjct: 959 CVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIY 1018
Query: 198 VTVRRHKKKLW-IE-HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAV 255
V L+ ++ H D V L ++S S D +KIW S+ C++++K H ++V
Sbjct: 1019 VWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSV 1078
Query: 256 NAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEK-HKSAVNALALSDDGTVLFS 314
++ V +Y+GS D I+VW E + T+ K H V L + ++ + S
Sbjct: 1079 SSCVVK-DRYLYSGSEDNSIKVWDLDTLE----CVYTIPKSHSLGVKCLMVFNNQII--S 1131
Query: 315 GACDRSILVWD 325
A D SI VW+
Sbjct: 1132 AAFDGSIKVWE 1142
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/159 (25%), Positives = 81/159 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H + LA++ ++S D+ + +W L L +++ HED V ++ +A +++ S
Sbjct: 994 HTKYIKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTAS-YLFSTS 1052
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D I++W + + I TL+ H ++V++ + D L+SG+ D SI VWD +
Sbjct: 1053 KDNVIKIW----DLSNFSCIDTLKGHWNSVSSCVVKD--RYLYSGSEDNSIKVWDLDTL- 1105
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQ 369
V T + H + CL+ ++S + D ++++W+
Sbjct: 1106 -ECVYT-IPKSHSLGVKCLMVFNNQIISAAFDGSIKVWE 1142
Score = 122 (48.0 bits), Expect = 0.00059, P = 0.00059
Identities = 43/156 (27%), Positives = 76/156 (48%)
Query: 271 ADRKIRVWAK--P---FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+D I+V AK P F++K ++T++ + VN++A D+ +L +G D + V+D
Sbjct: 838 SDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFD 897
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
D+ + + GH K+I + + + + S D T+++ S G C+ L GH
Sbjct: 898 VNDNWKCLYT---VNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRS-GNTKCIETLVGH 953
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
T V + A E+ +FS S D I+ W +S
Sbjct: 954 TGEVNCVVA-NEK------YLFSCSYDKTIKVWDLS 982
Score = 120 (47.3 bits), Expect = 0.00097, P = 0.00097
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 241 DLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
DL+C+ +I++ + VN++A + G D RV+ N K + T+ H+ +
Sbjct: 858 DLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWK---CLYTVNGHRKS 914
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
+ ++A + + +F+ + D +I V + T L GH + C++ L S
Sbjct: 915 IESIACNSN--YIFTSSPDNTIKVHIIRSGNTKCIET--LVGHTGEVNCVVANEKYLFSC 970
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEG-HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
S D+T+++W + F + EG HTK +K+L G+ +FSG D I W
Sbjct: 971 SYDKTIKVWDLST---FKEIKSFEGVHTKYIKTLAL---SGRY----LFSGGNDQIIYVW 1020
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 213 (80.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 237 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NG 295
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 349
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 350 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 401
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 402 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLMAALDPRAP 443
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNAGE----ML 277
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 278 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 334
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 335 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 373
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 320 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 378
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 379 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 432
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 433 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 481
Score = 116 (45.9 bits), Expect = 0.00093, P = 0.00093
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ +G D I++W K E + L H +V L L D V+ +G+ D ++ VWD
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTG----HTGSV--LCLQYDERVIITGSSDSTVRVWD 270
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ T L H +A+L L G++++ S DR++ +W S VL GH
Sbjct: 271 V--NAGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 326
Query: 386 TKPV 389
V
Sbjct: 327 RAAV 330
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 213 (80.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 237 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG 295
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 349
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 350 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 401
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 402 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLIAALDPRAP 443
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNTGE----ML 277
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 278 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 334
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 335 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 373
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 320 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 378
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 379 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 432
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 433 DLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 481
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 213 (80.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 295 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG 353
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 354 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 407
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 408 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 459
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 460 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLVAALDPRAP 501
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW + L C + H +V + + TGS+D +RVW E ++
Sbjct: 281 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNTGE----ML 335
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 336 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 392
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 393 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 431
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 378 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 436
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 437 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 490
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 491 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 539
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 213 (80.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 300 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG 358
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 359 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 412
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 413 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 464
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 465 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLVAALDPRAP 506
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 286 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNTGE----ML 340
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 341 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 397
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 398 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 436
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 383 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 441
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 442 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 495
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 496 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 544
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG 394
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 448
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 449 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 500
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 501 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLVAALDPRAP 542
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNTGE----ML 376
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 377 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 433
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 434 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 472
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 419 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 477
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 478 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NG 394
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 448
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 449 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 500
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 501 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLMAALDPRAP 542
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNAGE----ML 376
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 377 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 433
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 434 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 472
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 419 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 477
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 478 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 532 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NG 394
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 448
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 449 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 500
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 501 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLMAALDPRAP 542
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW S L C + H +V + + TGS+D +RVW E ++
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNAGE----ML 376
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 377 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 433
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 434 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 472
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 419 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 477
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 478 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 532 DLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG 394
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 448
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 449 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 500
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 501 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLVAALDPRAP 542
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 47/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW + L C + H +V + + TGS+D +RVW E ++
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNTGE----ML 376
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 377 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 433
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 434 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 472
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 419 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 477
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 478 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 212 (79.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K++ H +V L + +I + S D ++++W + L ++ H +AV + + G
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NG 394
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 448
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW+ S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 449 KVWNT--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 500
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 501 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLVAALDPRAP 542
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 47/162 (29%), Positives = 75/162 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALI 290
D ++KIW + L C + H +V + + TGS+D +RVW E ++
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDER-VIITGSSDSTVRVWDVNAGE----ML 376
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
TL H AV L L + ++ + + DRSI VWD S + + L GH A+ +
Sbjct: 377 NTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD 433
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++S S DRT+++W S F + L GH + + L
Sbjct: 434 FDDKYIVSASGDRTIKVWNT-STCEF--VRTLNGHKRGIACL 472
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 419 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDR 477
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 478 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 531
Query: 325 DREDSANHMVVTGAL--RG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + G L R H + L ++S S D T+ IW
Sbjct: 532 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 209 (78.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 235 VGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 290
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
++++ DC I VW Q V+ L F L V T
Sbjct: 291 GCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGT 350
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 351 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 407
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 408 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 462
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 463 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
Score = 156 (60.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 210 INARLNTGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTC 268
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 269 TTYKCQKTLEGHDGIVLALCIQ-GCRLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 323
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 324 VCTLVSSHN--LLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 378
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 379 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 410
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 314 VNTIR-AHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 372
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 373 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 427
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 428 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 486
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 487 SVTALAVSRG-RLFSGAVDSTVKVW 510
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 209 (78.6 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 72/229 (31%), Positives = 110/229 (48%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSL-KIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K+ H +V L + +I + S D ++ ++W + L ++ H +AV + S G
Sbjct: 254 KVLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS-NG 312
Query: 265 TVYTGSADRKIRVW--AKPFN-EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ T S DR I VW A P + R L+ H++AVN + D V SG DR+I
Sbjct: 313 LMVTCSKDRSIAVWDMASPTDITLRRVLVG----HRAAVNVVDFDDKYIVSASG--DRTI 366
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLA 380
VW S V T L GH + I CL L++SGS+D T+R+W D G CL
Sbjct: 367 KVWST--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLW----DIECGACLR 418
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
VLEGH + V+ + + + SG+ DG+I+ W + + +P
Sbjct: 419 VLEGHEELVRCIRFDNKR-------IVSGAYDGKIKVWDLQAALDPRAP 460
Score = 183 (69.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 69/230 (30%), Positives = 104/230 (45%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIW-RAS--DLRCLESIKAHEDAVNAVAVSAGGT 265
I H +AV L +NGL+ + S D+S+ +W AS D+ + H AVN V
Sbjct: 298 IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKY 356
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + S DR I+VW+ E + TL HK + L D ++ SG+ D +I +WD
Sbjct: 357 IVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 410
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW--QRGSDGRFG----CL 379
E A V L GH + + C+ ++SG+ D +++W Q D R CL
Sbjct: 411 IECGACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCL 466
Query: 380 AVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
L H+ V L +E Q + S S D I W ++ P S+P
Sbjct: 467 RTLVEHSGRVFRLQF--DEFQ-----IISSSHDDTILIWDF-LNVPPSAP 508
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 56/184 (30%), Positives = 83/184 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++ I S D S+KIW + L CL+ + H +V + + TG
Sbjct: 218 ENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER-VIVTG 276
Query: 270 SADRKI-RVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
S+D + RVW E ++ TL H AV L S+ V S DRSI VWD
Sbjct: 277 SSDSTVSRVWDVNTGE----VLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMA- 329
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
S + + L GH A+ + ++S S DRT+++W S F + L GH +
Sbjct: 330 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRG 386
Query: 389 VKSL 392
+ L
Sbjct: 387 IACL 390
Score = 127 (49.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+++ + H AV + ++ I S S D+++K+W S + ++ H+ + A
Sbjct: 337 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDR 395
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
V +GS+D IR+W + + A + LE H+ V + D + SGA D I VW
Sbjct: 396 LVVSGSSDNTIRLW----DIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 449
Query: 325 DREDSANHMVV--TGALRG---HGKAILCLINVAGLLMSGSADRTVRIW 368
D + + + T LR H + L ++S S D T+ IW
Sbjct: 450 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 498
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 210 (79.0 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 317 VGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 372
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 373 GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 432
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 433 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 489
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 490 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 544
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 545 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 156 (60.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 292 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTC 350
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 351 TTYKCQKTLEGHDGIVLALCIQ-GCKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 405
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 406 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 460
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 461 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 492
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 396 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 454
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 455 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 509
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 510 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 568
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 569 SVTALAVSRG-RLFSGAVDSTVKVW 592
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 221 (82.9 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 65/191 (34%), Positives = 98/191 (51%)
Query: 204 KKKLWIEHGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K K+ H D +T L + I S S D +LK+W A + +CL ++ H V + +S
Sbjct: 986 KPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS- 1044
Query: 263 GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSIL 322
G + +GS DR ++VW + A + TL+ H S V + L G+ + SG+ D ++
Sbjct: 1045 GNIIISGSTDRTLKVW----DMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLR 1098
Query: 323 VWDRED-SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAV 381
VWD E S H++V GH A+ C+ L++SG+ D V+IW R CL
Sbjct: 1099 VWDIEQGSCLHVLV-----GHLAAVRCVQYDGKLIVSGAYDYMVKIWH---PERQECLHT 1150
Query: 382 LEGHTKPVKSL 392
L+GHT V SL
Sbjct: 1151 LQGHTNRVYSL 1161
Score = 189 (71.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 63/211 (29%), Positives = 97/211 (45%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W CL + H AV V G + +G+
Sbjct: 1074 HTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD-GKLIVSGA 1132
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED-S 329
D +++W + +R + TL+ H + V +L DG + SG+ D SI VWD E +
Sbjct: 1133 YDYMVKIW----HPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGN 1186
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
H L GH + +L+SG+AD TV++W + G+ CL L G P
Sbjct: 1187 CKH-----TLMGHQSLTSGMELRQNILVSGNADSTVKVWDI-TTGQ--CLQTLSG---PN 1235
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
K +AVT N V S DG ++ W V
Sbjct: 1236 KHHSAVTCLQFNSRFVVTSSD-DGTVKLWDV 1265
Score = 186 (70.5 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 51/156 (32%), Positives = 81/156 (51%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR+ +R + +K H+D V +G + +GS D ++VW+ N K + TL H
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSA-VNGK---CLRTLVGH 1034
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + +S G ++ SG+ DR++ VWD + A V T L+GH + C+ +
Sbjct: 1035 TGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGA--CVHT--LQGHTSTVRCMHLHGSKV 1088
Query: 357 MSGSADRTVRIW--QRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W ++GS CL VL GH V+
Sbjct: 1089 VSGSRDATLRVWDIEQGS-----CLHVLVGHLAAVR 1119
Score = 168 (64.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 51/179 (28%), Positives = 80/179 (44%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V ++ +I S S D++LK+W C+ +++ H V + + G V +
Sbjct: 1032 VGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH-GSKVVS 1090
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GS D +RVW H L+ H +AV + DG ++ SGA D + +W E
Sbjct: 1091 GSRDATLRVWDIEQGSCLHVLVG----HLAAVRCVQY--DGKLIVSGAYDYMVKIWHPE- 1143
Query: 329 SANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
L+GH + L GL ++SGS D ++R+W D G C L GH
Sbjct: 1144 ---RQECLHTLQGHTNRVYSL-QFDGLHVVSGSLDTSIRVW----DVETGNCKHTLMGH 1194
Score = 39 (18.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 67 SVP-SLQKLSPDETINFSSASHLCINSV--QLGHKLP 100
S P S Q L P ++ + +SHL ++ LG + P
Sbjct: 796 STPRSSQHLGPTAVLSVTPSSHLTSSTPGSALGRRTP 832
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 203 (76.5 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 60/196 (30%), Positives = 97/196 (49%)
Query: 213 DAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLR----CLESIKAHEDAVNAVAVSAGGTV 266
D V LA + NG ++ + + DK ++IW + D ++S++ HE V VA S G
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQIW-SKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRF 83
Query: 267 YTGSA-DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
G++ D +W K +E +++LE H V ++A GT+L + + D+SI +W
Sbjct: 84 LAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQ 143
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLE 383
ED N GHG+ I C++ LL S S D T++ W + DG + C+ L
Sbjct: 144 MEDD-NDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFW-KDIDGDWECINTLT 201
Query: 384 GHTKPVKSLTAVTEEG 399
GH + L A ++G
Sbjct: 202 GHESSIWDL-AFNKDG 216
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 210 (79.0 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 352 VGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 407
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 408 GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 467
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 468 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 524
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 525 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 579
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 580 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 327 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTC 385
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 386 TTYKCQKTLEGHDGIVLALCIQ-GCKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 440
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 441 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 495
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 496 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 527
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 431 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 489
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 490 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 544
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 545 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 603
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 604 SVTALAVSRG-RLFSGAVDSTVKVW 627
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 210 (79.0 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 393 VGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 448
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 449 GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 508
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 509 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 565
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 566 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 620
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 621 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 368 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTC 426
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 427 TTYKCQKTLEGHDGIVLALCIQ-GCKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 481
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 482 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 536
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 537 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 568
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 472 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 530
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 531 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 585
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 586 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 644
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 645 SVTALAVSRG-RLFSGAVDSTVKVW 668
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 203 (76.5 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 69/244 (28%), Positives = 114/244 (46%)
Query: 211 HGDAVTGLAV-NNGLIYSV-SWDKSLKIWR----ASDLRCLESIKAHEDAVNAVAVSAGG 264
H D + + V G +++ + DKS+++WR + + C+ H +AV ++A S
Sbjct: 385 HTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMK 444
Query: 265 T--VYTGSADRKIRVWAKPFNEKRHALI-----ATLEKHKSAVNALALSDDGTVLFSGAC 317
V +GS D ++VW P ++ +T H+ VN++ +S + +L SG+
Sbjct: 445 QQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQ 504
Query: 318 DRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQRGSDGR 375
DR+ +W D + + G RGH + + + V +L S SAD +VRIW S
Sbjct: 505 DRTAKLWALSD----LRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIW---SIQD 557
Query: 376 FGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSPLNLQK 434
F CL EGH V + V+ G V SGS DG ++ W + + C + + K
Sbjct: 558 FSCLKTFEGHDASVLKIIFVSR----GTQLVSSGS-DGLVKLWTIKTNECVRTLDAHQDK 612
Query: 435 -WNL 437
W L
Sbjct: 613 VWAL 616
Score = 168 (64.2 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 58/201 (28%), Positives = 92/201 (45%)
Query: 234 LKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIAT 292
LK++ S C + + H D + ++ V G+++ T + D+ +RVW + R +A
Sbjct: 369 LKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQ 427
Query: 293 LEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANH-----MVVTGALRGHGKAI 346
H +AV ++A S + SG+ D ++ VWD ++ M R H K +
Sbjct: 428 GTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDV 487
Query: 347 --LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+C+ LL SGS DRT ++W SD R L V GH + V S+ + G
Sbjct: 488 NSVCVSPNDKLLASGSQDRTAKLWAL-SDLRL--LGVCRGHRRGVWSVQFSPVDQILG-- 542
Query: 405 SVFSGSLDGEIRAWQVS-VSC 424
S S DG +R W + SC
Sbjct: 543 ---SASADGSVRIWSIQDFSC 560
Score = 144 (55.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 192 MLPNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAH 251
M+ + T R H+K + ++V ++ N+ L+ S S D++ K+W SDLR L + H
Sbjct: 472 MMMKARSTERAHEKDV-----NSVC-VSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGH 525
Query: 252 EDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V +V S + + SAD +R+W+ + + + T E H ++V + GT
Sbjct: 526 RRGVWSVQFSPVDQILGSASADGSVRIWSI----QDFSCLKTFEGHDASVLKIIFVSRGT 581
Query: 311 VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIW 368
L S D + +W + N V T L H + L L+++GSAD T+ +W
Sbjct: 582 QLVSSGSDGLVKLWTIK--TNECVRT--LDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 53 (23.7 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 123 DRTGTTWTSINTFNDND--SSSGSVKSVTFCDG----KIFTAHQDCKIRVW 167
D T W I + ++ SSG V V F ++F++ DC IR+W
Sbjct: 127 DGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/88 (25%), Positives = 34/88 (38%)
Query: 88 LCINSVQL--GHKLPIGCIAVHHN---FLYAASSHEINVYDRTGTTWTSINTFNDNDSSS 142
L NS Q+ GH I I V F A + V+ R + ++ S
Sbjct: 374 LSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVW-RMDVSSGRVHCVAQGTGHS 432
Query: 143 GSVKSVTFCDGK---IFTAHQDCKIRVW 167
+V S+ K + + QDC ++VW
Sbjct: 433 NAVGSIACSRMKQQFVVSGSQDCTVKVW 460
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 209 (78.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 393 VGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 448
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 449 GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVWDIVGT 508
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 509 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 565
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 566 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 620
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 621 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/218 (31%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 368 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTC 426
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 427 TTYKCQKTLEGHDGIVLALCIQ-GCKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 481
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + VLFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 482 VCTLVSSHN--VLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 536
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 537 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 568
Score = 129 (50.5 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 472 VNTIR-AHDNPVCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 530
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 531 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 585
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 586 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 644
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 645 SVTALAVSRG-RLFSGAVDSTVKVW 668
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 209 (78.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 393 VGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 448
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
++++ DC I VW Q V+ L F L V T
Sbjct: 449 GCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGT 508
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 509 ELKLKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 565
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 566 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 620
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 621 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 368 INARLNTGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTC 426
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 427 TTYKCQKTLEGHDGIVLALCIQ-GCRLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 481
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 482 VCTLVSSHN--LLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQSYLYSG 536
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 537 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 568
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 472 VNTIR-AHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 530
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
+ SGS +++ D I T DC I V Q + ++
Sbjct: 531 SYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 585
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 586 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 644
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 645 SVTALAVSRG-RLFSGAVDSTVKVW 668
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 81/291 (27%), Positives = 135/291 (46%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 383 VGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 438
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 439 GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 498
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L + +YS S+ +++KIW +L C+ ++ +V ++
Sbjct: 499 ELKLKKELTGLNHW--VRALVASQNYLYSGSY-QTIKIWDIRNLECVHVLQTSGGSVYSI 555
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 556 AVT-NHHIVCGTYENLIHVWDIETKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 610
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRI 367
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++
Sbjct: 611 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 154 (59.3 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 358 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTC 416
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 417 TTYKCQKTLEGHDGIVLALCIQ-GNKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 471
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 472 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVASQNYLYSG 526
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW + C+ VL+ V S+ AVT
Sbjct: 527 SY-QTIKIWDIRN---LECVHVLQTSGGSVYSI-AVT 558
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 44/204 (21%), Positives = 88/204 (43%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W +
Sbjct: 462 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQ 520
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
N SGS +++ D + + +C + V Q + ++
Sbjct: 521 NYLYSGSYQTIKIWDIR----NLEC-VHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 575
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 576 IETKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 634
Query: 254 AVNAVAVSAGGTVYTGSADRKIRV 277
+V A+AVS G +++G+ D ++V
Sbjct: 635 SVTALAVSRG-RLFSGAVDSTVKV 657
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 208 (78.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 82/292 (28%), Positives = 134/292 (45%)
Query: 95 LGHKLPIGCIAVHH--NFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC 151
+GH+ P+ C+ V+ + L++ SS + I V+D T TT+ T +D G V ++
Sbjct: 392 VGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD-TCTTYKCQKTLEGHD---GIVLALCIQ 447
Query: 152 DGKIFTAHQDCKIRVW-----QXXXXXXXXXXXXXXXVNDRLLRFM--LPNSYV-----T 199
K+++ DC I VW Q V+ + F L V T
Sbjct: 448 GCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGT 507
Query: 200 VRRHKKKLW-IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
+ KK+L + H V L +YS S+ +++KIW L C+ ++ +V ++
Sbjct: 508 ELKLKKELTGLNHW--VRALVAAQTYLYSGSY-QTIKIWDIRTLDCIHVLQTSGGSVYSI 564
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGA 316
AV+ + G+ + I VW E+ + TL H V ALA+ + D T +FS +
Sbjct: 565 AVT-NHHIVCGTYENLIHVWDIESKEQ----VRTLTGHVGTVYALAVISTPDQTKVFSAS 619
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
DRS+ VW S ++M+ T L H ++ L G L SG+ D TV++W
Sbjct: 620 YDRSLRVW----SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
Score = 154 (59.3 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 67/218 (30%), Positives = 109/218 (50%)
Query: 184 VNDRLLRFMLPNSYVTVRRHK-KKLWIEHGDAVTGLAVNN-G-LIYSVSWDKSLKIW-RA 239
+N RL +L SY + K K ++ H V L V + G L++S S DK++K+W
Sbjct: 367 INARLNMGIL-GSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTC 425
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
+ +C ++++ H+ V A+ + G +Y+GSAD I VW +K + T+ H +
Sbjct: 426 TTYKCQKTLEGHDGIVLALCIQ-GCKLYSGSADCTIIVWDIQNLQK----VNTIRAHDNP 480
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSG 359
V L S + +LFSG+ ++I VWD + + + L G + L+ L SG
Sbjct: 481 VCTLVSSHN--MLFSGSL-KAIKVWDIVGT--ELKLKKELTGLNHWVRALVAAQTYLYSG 535
Query: 360 SADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVT 396
S +T++IW R D C+ VL+ V S+ AVT
Sbjct: 536 SY-QTIKIWDIRTLD----CIHVLQTSGGSVYSI-AVT 567
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 48/205 (23%), Positives = 87/205 (42%)
Query: 90 INSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT------------WTSINTFND 137
+N+++ H P+ + HN L++ S I V+D GT W
Sbjct: 471 VNTIR-AHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQ 529
Query: 138 NDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSY 197
SGS +++ D I T DC I V Q + ++
Sbjct: 530 TYLYSGSYQTIKIWD--IRTL--DC-IHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWD 584
Query: 198 VTVRRHKKKLWIEHGDAVTGLAV----NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ + + L H V LAV + ++S S+D+SL++W ++ C +++ H+
Sbjct: 585 IESKEQVRTL-TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQG 643
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVW 278
+V A+AVS G +++G+ D ++VW
Sbjct: 644 SVTALAVSRG-RLFSGAVDSTVKVW 667
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/216 (31%), Positives = 106/216 (49%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
K + H +V L ++ +I S S D ++++W + + ++ H +AV + + G
Sbjct: 244 KTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGM 302
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ T S DR I VW + L L H++AVN + + V SG DR+I VW
Sbjct: 303 MVTCSKDRSIAVWDMT-SPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWS 359
Query: 326 REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
S V T L GH + I CL L++SGS+D ++R+W D G CL VLEG
Sbjct: 360 T--STCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNSIRLW----DIECGACLRVLEG 411
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
H + V+ + T+ + SG+ DG+I+ W +
Sbjct: 412 HEELVRCIRFDTKR-------IVSGAYDGKIKVWDL 440
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/183 (28%), Positives = 90/183 (49%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
E+ V L ++G I S D ++KIW +DL+C++++ H +V + + +G
Sbjct: 208 ENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYD-DKVIISG 266
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S+D +RVW E ++ TL H AV L L + ++ + + DRSI VWD S
Sbjct: 267 SSDSTVRVWDVNTGE----MVNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMT-S 319
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + + L GH A+ + ++S S DRT+++W S F + L GH + +
Sbjct: 320 PSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWST-STCEF--VRTLNGHKRGI 376
Query: 390 KSL 392
L
Sbjct: 377 ACL 379
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 192 MLPNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAH 251
M S +T+RR + + H AV + + I S S D+++K+W S + ++ H
Sbjct: 317 MTSPSEITLRR----VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGH 372
Query: 252 EDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV 311
+ + A V +GS+D IR+W + + A + LE H+ V + D
Sbjct: 373 KRGI-ACLQYRDRLVVSGSSDNSIRLW----DIECGACLRVLEGHEELVRCIRF--DTKR 425
Query: 312 LFSGACDRSILVWDRE---D--SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVR 366
+ SGA D I VWD D +A++ + L H + L ++S S D T+
Sbjct: 426 IVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTIL 485
Query: 367 IW 368
IW
Sbjct: 486 IW 487
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 59/269 (21%), Positives = 100/269 (37%)
Query: 77 DETINFSSASHL-CINSVQLGHKLPIGCIAVHHNFLYAASSHE-INVYDRTGTTWTSINT 134
D TI + L C+ ++ +GH + C+ + + SS + V+D T +NT
Sbjct: 229 DNTIKIWDRTDLQCVKTL-MGHTGSVLCLQYDDKVIISGSSDSTVRVWDVN--TGEMVNT 285
Query: 135 FNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLP 194
+ + V + F +G + T +D I VW +
Sbjct: 286 LIHHCEA---VLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFD 342
Query: 195 NSYVTVRRHKK--KLWIE-----------HGDAVTGLAVNNGLIYSVSWDKSLKIWRASD 241
Y+ + K+W H + L + L+ S S D S+++W
Sbjct: 343 EKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIEC 402
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVW-----AKPFNEKRHALIATLEKH 296
CL ++ HE+ V + V +G+ D KI+VW P + TL +H
Sbjct: 403 GACLRVLEGHEELVRCIRFDTKRIV-SGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEH 461
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWD 325
V L D + S + D +IL+WD
Sbjct: 462 TGRV--FRLQFDEFQIVSSSHDDTILIWD 488
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 62/210 (29%), Positives = 100/210 (47%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V ++ + G I S S D S+ +W + LE +K H+ V+ V + +G V T +
Sbjct: 898 HTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAA 957
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD-REDS 329
D +++W + + +AT+ + SA+ +L D +L + D +WD R
Sbjct: 958 HDGTVKMW----DVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGK 1013
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
H L+GH K I + V L++GS D T R+W S R C AVL H PV
Sbjct: 1014 QMHK-----LKGHTKWIRSIRMVEDTLITGSDDWTARVW---SVSRGSCDAVLACHAGPV 1065
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
+S+ + G+++ GS DG +R W+
Sbjct: 1066 QSVEYSPFD--KGIIT---GSADGLLRFWE 1090
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 203 (76.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 53/168 (31%), Positives = 90/168 (53%)
Query: 213 DAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTG 269
+ VT +A++ +G L+ + S D +++W A LE + H D+V +VA S G ++ +G
Sbjct: 416 NGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASG 475
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S D+ +++W + R AT HK V ++A S DG+ L SG+ DRS+ WD +
Sbjct: 476 SLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Query: 330 ANHMVVTGALRGHGKAILCLI-----NVAGLLMSGSADRTVRIWQRGS 372
HM+ L+GH +++ + N G+ +GS D R+W+ S
Sbjct: 536 TTHMM----LQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/203 (31%), Positives = 95/203 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHE----DAVNAVAVSAGGT-VYTGSADRKIRVWA 279
I S S DK KIW +C ++ E + V +VA+S G V GS D +R+W
Sbjct: 384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLW- 442
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ + + E H +V ++A S DG L SG+ D+S+ +WD S +
Sbjct: 443 ---DAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATF 499
Query: 340 RGHGKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFGCL-AVLEGHTKPVKSLTAVT 396
GH +L + + G L+SGS DR+V+ W D R G +L+GH V S+
Sbjct: 500 NGHKDFVLSVAFSPDGSWLISGSKDRSVQFW----DPRNGTTHMMLQGHKNSVISVALSP 555
Query: 397 EEGQNGVVSVFSGSLDGEIRAWQ 419
+ +GV + SG D R W+
Sbjct: 556 KNNSHGVFATGSG--DFRSRLWK 576
Score = 162 (62.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 50/194 (25%), Positives = 93/194 (47%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
DK++K+W + + HE + ++ S+ G + +GS D+K ++W + + A
Sbjct: 348 DKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW--DIEKGKCAF 405
Query: 290 IATLEK--HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAIL 347
E+ K+ V ++A+S DG ++ +G+ D + +WD + GH ++
Sbjct: 406 TLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG----YFLERYEGHLDSVY 461
Query: 348 CL-INVAGL-LMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ + G L SGS D+++++W GS R C A GH V S+ A + +G
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV-AFSPDGS---- 516
Query: 405 SVFSGSLDGEIRAW 418
+ SGS D ++ W
Sbjct: 517 WLISGSKDRSVQFW 530
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 52/181 (28%), Positives = 84/181 (46%)
Query: 246 ESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALA 304
ES K + + +V S G + TG+ D+ ++VW + +H T H+ + +L
Sbjct: 321 ESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQH----TFYGHELDIYSLD 376
Query: 305 LSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG--HGKAILCLINVAGLLMSGSAD 362
S DG + SG+ D+ +WD E + G +G + + L+ +GS D
Sbjct: 377 YSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD 436
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSV 422
VR+W G F L EGH V S+ A + +G+ S+ SGSLD ++ W +S
Sbjct: 437 NIVRLWD-AQTGYF--LERYEGHLDSVYSV-AFSPDGK----SLASGSLDKSLKLWDLSG 488
Query: 423 S 423
S
Sbjct: 489 S 489
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 56/222 (25%), Positives = 93/222 (41%)
Query: 201 RRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV 260
RRH ++ E+G G + V ++ S++ DL L +++ H V V
Sbjct: 240 RRHDTEMSEENGK-------EKGTDWLVGYNPSVQTNLNIDL--LHNLQ-HNSVVCCVNF 289
Query: 261 SAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA-VNALALSDDGTVLFSGACDR 319
S G +R +++ +K HA + EK + ++ S DG L +GA D+
Sbjct: 290 SNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDK 349
Query: 320 SILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFG 377
++ VWD + GH I L + G ++SGS D+ +IW G+
Sbjct: 350 TVKVWDIHTKK----IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI-EKGK-- 402
Query: 378 CLAVLEGH-TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
C L P +T+V +V+ +GSLD +R W
Sbjct: 403 CAFTLGNEEVGPKNGVTSVAMSPDGRLVA--AGSLDNIVRLW 442
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 196 (74.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 57/178 (32%), Positives = 96/178 (53%)
Query: 247 SIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL 305
++K H ++++V S G + + SAD+ I++W ++ K TLE HK ++ +A
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGA-YDGKFER---TLEGHKEGISDIAW 96
Query: 306 SDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INV-AGLLMSGSADR 363
S D ++ S + D++I +WD E + MV T L+GH + + + N + L++SGS D
Sbjct: 97 SQDSKLICSASDDKTIKIWDVE--SGKMVKT--LKGHKEYVFGVSFNPQSNLIVSGSFDE 152
Query: 364 TVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
VRIW + G C ++ H+ PV T V ++G + V SGS DG +R W +
Sbjct: 153 NVRIWDVNT-GE--CTKMISAHSDPV---TGV-HFNRDGTL-VVSGSYDGTVRIWDTT 202
Score = 178 (67.7 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 52/195 (26%), Positives = 97/195 (49%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEK 285
S S DK++KIW A D + +++ H++ ++ +A S + + S D+ I++W + +
Sbjct: 63 SASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIW----DVE 118
Query: 286 RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
++ TL+ HK V ++ + ++ SG+ D ++ +WD N T + H
Sbjct: 119 SGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD----VNTGECTKMISAHSDP 174
Query: 346 ILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGV 403
+ + N G L++SGS D TVRIW + ++ +G K ++ V + NG
Sbjct: 175 VTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG-----KEVSFV-KFSPNGK 228
Query: 404 VSVFSGSLDGEIRAW 418
V +G+LD +R W
Sbjct: 229 F-VLAGTLDNTLRLW 242
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/179 (24%), Positives = 88/179 (49%)
Query: 211 HGDAVTGLA--VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVY 267
H + ++ +A ++ LI S S DK++KIW + ++++K H++ V V+ + +
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D +R+W E + A H V + + DGT++ SG+ D ++ +WD
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISA----HSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT- 201
Query: 328 DSANHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ ++ T + + + G +++G+ D T+R+W ++ + CL GH
Sbjct: 202 -TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKK--CLKTYTGH 257
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/219 (25%), Positives = 101/219 (46%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H + V G++ N + LI S S+D++++IW + C + I AH D V V + GT V
Sbjct: 129 HKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVV 188
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D +R+W + + I+T E K V+ + S +G + +G D ++ +W
Sbjct: 189 SGSYDGTVRIWDTTTGQLLNT-IST-EDGKE-VSFVKFSPNGKFVLAGTLDNTLRLWSYN 245
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-----LMSGSADRTVRIWQRGSDGRFGCLAVL 382
N+ GH C+ + + +++GS D + I+ + + L
Sbjct: 246 ---NNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTRE---IVQTL 299
Query: 383 EGHTKPVKSLTAVTEEGQNGVVSVFSGSL--DGEIRAWQ 419
GH V LT +N +++ SG+L D ++ W+
Sbjct: 300 AGHEDVV--LTVACHPTEN-IIA--SGALEKDRSVKIWK 333
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 202 (76.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 61/188 (32%), Positives = 86/188 (45%)
Query: 237 WRASDLRCLESI-KAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
WR RC + + H D V + + + +GS D IR+W N +A LE
Sbjct: 259 WRHG--RCRQVVLSGHSDGVMCLQL-VRNILASGSYDATIRLW----NLATFQQVALLEG 311
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL 355
H S V L D L SG+ D++I +W+ S L GH ++LCL + L
Sbjct: 312 HSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSE----CISILHGHTDSVLCLTFDSTL 365
Query: 356 LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
L+SGSAD TV++W R L GHT PV S+ + + G V SGS D I
Sbjct: 366 LVSGSADCTVKLWHFSGGKRI----TLRGHTGPVNSVRIIRDRGL-----VLSGSDDSTI 416
Query: 416 RAWQVSVS 423
+ W + +
Sbjct: 417 KIWSLETN 424
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H D V L + ++ S S+D ++++W + + + ++ H V + + +GS
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI-SGS 330
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ IR+W N + I+ L H +V L L+ D T+L SG+ D ++ +W
Sbjct: 331 MDKTIRIW----NYRTSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGK 384
Query: 331 NHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+T LRGH + + +I GL++SGS D T++IW ++ CL H P
Sbjct: 385 R---IT--LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT---CLHTFSAHIGP 436
Query: 389 VKSL 392
V+SL
Sbjct: 437 VQSL 440
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H VT L + + S S DK+++IW C+ + H D+V + + V +GS
Sbjct: 312 HSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLV-SGS 370
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
AD +++W F+ + TL H VN++ + D ++ SG+ D +I +W E
Sbjct: 371 ADCTVKLWH--FSGGKRI---TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLE--T 423
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
N + T H + L L S S D T++ W C+ L GH + V
Sbjct: 424 NTCLHT--FSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKK---CVHTLFGHIEGVW 478
Query: 391 SLTA----VTEEGQNGVVSVF 407
+ A + +GVV V+
Sbjct: 479 EIAADHLRLISGAHDGVVKVW 499
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
+N + I+ L H +V L L+ D T+L SG+ D ++ +W +T LRG
Sbjct: 338 WNYRTSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGKR---IT--LRG 390
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H + + +I GL++SGS D T++IW ++ CL H PV+SL A+ +
Sbjct: 391 HTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT---CLHTFSAHIGPVQSL-ALADS- 445
Query: 400 QNGVVSVFSGSLDGEIRAWQV 420
+FS SLDG I+ W +
Sbjct: 446 -----RLFSCSLDGTIKQWDI 461
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 75/295 (25%), Positives = 120/295 (40%)
Query: 89 CINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDN---DSSSGSV 145
C V GH + C+ + N L + S YD T W ++ TF + S V
Sbjct: 264 CRQVVLSGHSDGVMCLQLVRNILASGS------YDATIRLW-NLATFQQVALLEGHSSGV 316
Query: 146 KSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRF---MLPNSYV--TV 200
+ F K+ + D IR+W + L F +L + TV
Sbjct: 317 TCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTD-SVLCLTFDSTLLVSGSADCTV 375
Query: 201 RR-H---KKKLWIE-HGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED 253
+ H K++ + H V + + + GL+ S S D ++KIW CL + AH
Sbjct: 376 KLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIG 435
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V ++A+ A +++ S D I+ W EK+ + TL H V +A D L
Sbjct: 436 PVQSLAL-ADSRLFSCSLDGTIKQWDI---EKKKC-VHTLFGHIEGVWEIAA--DHLRLI 488
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
SGA D + VW+ A V T L+ H + + + ++SGS D + +W
Sbjct: 489 SGAHDGVVKVWE----ACECVHT--LKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 199 (75.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 68/241 (28%), Positives = 114/241 (47%)
Query: 139 DSSSGSVKSVTFC-DGKIFTA-HQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFML-PN 195
+ S SV+SV F +G++ + D I++W +DR+ PN
Sbjct: 80 EGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGH---SDRVESVAFSPN 136
Query: 196 SYV-TVRRHKKKLWIE-HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAH 251
+ K IE H D V +A + +G L+ S S +K++K+W ++ ++ H
Sbjct: 137 GQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 252 EDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
+ V + S G + +GS D I++W P +H TLE H + + +LA S +G
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKH----TLEGHSNKIESLAFSPNGQ 252
Query: 311 VLFSGACDRSILVWDRED-SANHMVVTGALRGHGKAILCLINV--AGLLMSGSADRTVRI 367
+L SG+ D +I +WD S H L+GH +L ++ + LL SGS D T+++
Sbjct: 253 LLASGSSDATIKLWDTATGSFRH-----TLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL 307
Query: 368 W 368
W
Sbjct: 308 W 308
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 50/149 (33%), Positives = 76/149 (51%)
Query: 276 RVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV 335
++W +H T+E H V ++A S DG +L SG+ +++I +WD SA +
Sbjct: 138 QLWNPAIGSLKH----TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD---SAT-CGL 189
Query: 336 TGALRGHGKAILCLI-NVAG-LLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSL 392
L GH +L L+ + G LL SGS D T+++W S G L LEGH+ ++SL
Sbjct: 190 KHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPS----GSLKHTLEGHSNKIESL 245
Query: 393 TAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
A + GQ + SGS D I+ W +
Sbjct: 246 -AFSPNGQ----LLASGSSDATIKLWDTA 269
Score = 143 (55.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ TLE H + + S DG +L SG+ D +I +WD + L GH ++ +
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG----LKQTLEGHSSSVQSV 89
Query: 350 -INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ--NGVVS 405
+ G LL SGS+D T+++W SD +EGH+ V+S+ A + GQ N +
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDS---LKHTMEGHSDRVESV-AFSPNGQLWNPAIG 145
Query: 406 VFSGSLDGEIRAWQVSVS 423
+++G W +SV+
Sbjct: 146 SLKHTIEGH-SDWVLSVA 162
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
L+ S S D ++K+W +++ H + + ++A S G + +GS+D I++W
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT 270
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
RH TL+ H V ++ S D +L SG+ D +I +WD
Sbjct: 271 GSFRH----TLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 245 LESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL 303
L++++ H D + V S G + +GS D I++W + L TLE H S+V ++
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW----DPASGGLKQTLEGHSSSVQSV 89
Query: 304 ALSDDGTVLFSGACDRSILVWDR-EDSANH 332
A S +G +L SG+ D +I +W+ DS H
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKH 119
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 201 (75.8 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 65/229 (28%), Positives = 113/229 (49%)
Query: 211 HGDAVTGL-AVNNGL-IYSVSWDKSLKIWRAS--D--LRCLESIKAHEDAVNAVAVSA-- 262
H D V L + +G+ + + + D ++++W + D +C+ H +V AVA+
Sbjct: 363 HTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLD 422
Query: 263 --GGTVYTGSA--DRKIRVW--AKPFNEK--RHALIATLEKHKSAVNALALSDDGTVLFS 314
G + S+ DR ++ + N+ + + T++ H VNA+ +S DG ++ S
Sbjct: 423 VNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIAS 482
Query: 315 GACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLIN-VAGLLMSGSADRTVRIWQRGS 372
+ D++I +WD S +V G LRGH + + C N + L SGS DRT+RIW +
Sbjct: 483 ASQDKTIKLWD--SSTGEVV--GVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 373 DGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
C+ LEGHT + L +++ Q V S + DG ++ W +S
Sbjct: 539 QQ---CVQTLEGHTGAILKLIYISQGTQ-----VVSAAADGLVKVWSLS 579
Score = 175 (66.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 70/227 (30%), Positives = 111/227 (48%)
Query: 211 HGDAVTGLAVN----NG---LIYSVSWDKSLKIWRA------SDL--RCLESIKAHEDAV 255
H +VT +A+ NG + S S D++LK + SD R + +IKAH+ V
Sbjct: 409 HTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDV 468
Query: 256 NAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFS 314
NA+ VS G + + S D+ I++W E ++ L H+ V A + + L S
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGE----VVGVLRGHRRGVWACSFNPFSRQLAS 524
Query: 315 GACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVA-GL-LMSGSADRTVRIWQRGS 372
G+ DR+I +W+ + V T L GH AIL LI ++ G ++S +AD V++W S
Sbjct: 525 GSGDRTIRIWNVD--TQQCVQT--LEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Query: 373 DGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
G C+A L+ H V +L + + G + V SG D + W+
Sbjct: 581 -GE--CVATLDNHEDRVWALASRFD----GSLLV-SGGADAVVSVWK 619
Score = 175 (66.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 89/340 (26%), Positives = 137/340 (40%)
Query: 54 VSLQSNLSLQTLPSVP-----SLQKL--SPDETINFS--SASHL--CINS-----VQLGH 97
+S+ S+LSL VP +++KL S DE I+ + HL C N+ +
Sbjct: 294 LSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDG 353
Query: 98 KLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFT 157
G + H + + S E V+ TG ++ +N N + V C +FT
Sbjct: 354 TQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDN-----VYKCI-HVFT 407
Query: 158 AHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLL-RFMLPNSYVTVRRHKKKLWI--EHGDA 214
H V DR L RF L + + +W H
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRD 467
Query: 215 VTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSA 271
V + V+ +G +I S S DK++K+W +S + ++ H V A + + + +GS
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSG 527
Query: 272 DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSAN 331
DR IR+W N + TLE H A+ L GT + S A D + VW S+
Sbjct: 528 DRTIRIW----NVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL--SSG 581
Query: 332 HMVVTGALRGHGKAILCLINV--AGLLMSGSADRTVRIWQ 369
V T L H + L + LL+SG AD V +W+
Sbjct: 582 ECVAT--LDNHEDRVWALASRFDGSLLVSGGADAVVSVWK 619
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 245 LESIKAHEDA-VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
L SIK ED V A+A+++ + R + ++ P + I +++ H++ V
Sbjct: 53 LFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRR----IKSMKAHETPVIT 108
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAG--LLMS 358
+ + T+L +G + + VWD + VT + RGHG I LC +L S
Sbjct: 109 MTIDPTNTLLATGGAEGLVKVWDIAGA----YVTHSFRGHGGVISALCFGKHQNTWVLAS 164
Query: 359 GSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
G+ D VR+W S +AV EGH+ ++ LT G + SGS D ++ W
Sbjct: 165 GADDSRVRLWDLNSSRS---MAVFEGHSSVIRGLT-FEPTGS----FLLSGSRDKTVQVW 216
Query: 419 QV 420
+
Sbjct: 217 NI 218
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKS--LKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY 267
+ D VT LA+ + ++ +S L I+ R ++S+KAHE V + + T+
Sbjct: 59 DEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLL 118
Query: 268 -TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSD-DGT-VLFSGACDRSILVW 324
TG A+ ++VW H+ H ++AL T VL SGA D + +W
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSF----RGHGGVISALCFGKHQNTWVLASGADDSRVRLW 174
Query: 325 DREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIW 368
D +S+ M V GH I L L+SGS D+TV++W
Sbjct: 175 DL-NSSRSMAV---FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 105 (42.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY---TGSADRKIRVW 278
N L+ + + +K+W + S + H ++A+ + +G+ D ++R+W
Sbjct: 115 NTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW 174
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
N R +A E H S + L G+ L SG+ D+++ VW+
Sbjct: 175 --DLNSSRS--MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 94 (38.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 335 VTGALRGHGKAILCLINVA-GL-LMSGSADRTVRIWQRG-SDGRFGCLAVLEGHTKPVKS 391
V G L GH +L L + G+ L +G+ D TVR+W D + C+ V GHT V +
Sbjct: 356 VFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTA 415
Query: 392 LTAVTEEGQNGVVSVF-SGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ A+ NG + S S D ++ + + S N W +
Sbjct: 416 V-ALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTI 461
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/202 (29%), Positives = 94/202 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
+ S S D+S++IW +C ++ ED V VAVS G + GS DR +RVW
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSI-EDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 284 EKRHALIATLEK---HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
L + E H+ +V ++A S++G + SG+ DR++ +W E ++
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 430
Query: 341 -GHGKAIL--CLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT-AVT 396
GH +L C ++SGS DR V W + S L +L+GH V S+ ++
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGHRNSVISVAVSLN 487
Query: 397 EEGQNGVVSVFSGSLDGEIRAW 418
+G G+ + SG I W
Sbjct: 488 SKGTEGIFATGSGDCKARIWKW 509
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/208 (28%), Positives = 97/208 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
DK ++IW S R ++ ++ HE + ++ G + +GS DR +R+W + +L
Sbjct: 276 DKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIW--DLRTSQCSL 333
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD--------REDSANHMVVTGALRG 341
++E V +A+S DG ++ +G+ DR++ VWD R DS N G G
Sbjct: 334 TLSIE---DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE---NG--NG 385
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQ-RG-SDGRFGCLAVLEGHTKPVKSLTAVTE 397
H ++ + N + SGS DRTV++W G SD + C GH V S+ T
Sbjct: 386 HEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCC-TP 444
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
+ + + SGS D + W + P
Sbjct: 445 DNEY----ILSGSKDRGVIFWDQASGNP 468
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 76/311 (24%), Positives = 135/311 (43%)
Query: 89 CINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGSVKSV 148
C+ + G + GC F + D + NT D ++SV
Sbjct: 205 CVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY---IRSV 261
Query: 149 TFC-DGKIF-TAHQDCKIRVWQXXXXXXXXXXXXXXXV---------NDRLLRFMLPNSY 197
F DGK+ T +D IR+W DRL+ S
Sbjct: 262 CFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSV 321
Query: 198 VT--VRRHKKKLWIEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKA--- 250
+R + L + D VT +AV+ +G LI + S D+++++W ++ +E + +
Sbjct: 322 RIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 251 ----HEDAVNAVAVSAGGT-VYTGSADRKIRVW-AKPFNEKRHALIATLEKHKSAVNALA 304
HED+V +VA S G + +GS DR +++W + ++K+ T HK V ++
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVC 441
Query: 305 LSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL---IN---VAGLLMS 358
+ D + SG+ DR ++ WD+ S N +++ L+GH +++ + +N G+ +
Sbjct: 442 CTPDNEYILSGSKDRGVIFWDQA-SGNPLLM---LQGHRNSVISVAVSLNSKGTEGIFAT 497
Query: 359 GSADRTVRIWQ 369
GS D RIW+
Sbjct: 498 GSGDCKARIWK 508
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 53/175 (30%), Positives = 83/175 (47%)
Query: 255 VNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
+ +V S G + TG+ D+ IR+W + KR +I L H+ + +L DG L
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIW--DLSTKR--IIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSD 373
SG+ DRS+ +WD S +T ++ G + + L+ +GS DRTVR+W D
Sbjct: 314 SGSGDRSVRIWDLRTS--QCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVW----D 366
Query: 374 GRFGCLAV-LE-------GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
G L L+ GH V S+ A + G+ + SGSLD ++ W +
Sbjct: 367 STTGFLVERLDSGNENGNGHEDSVYSV-AFSNNGEQ----IASGSLDRTVKLWHL 416
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/202 (29%), Positives = 94/202 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
+ S S D+S++IW +C ++ ED V VAVS G + GS DR +RVW
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSI-EDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 284 EKRHALIATLEK---HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
L + E H+ +V ++A S++G + SG+ DR++ +W E ++
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 430
Query: 341 -GHGKAIL--CLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT-AVT 396
GH +L C ++SGS DR V W + S L +L+GH V S+ ++
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGHRNSVISVAVSLN 487
Query: 397 EEGQNGVVSVFSGSLDGEIRAW 418
+G G+ + SG I W
Sbjct: 488 SKGTEGIFATGSGDCKARIWKW 509
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/208 (28%), Positives = 97/208 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
DK ++IW S R ++ ++ HE + ++ G + +GS DR +R+W + +L
Sbjct: 276 DKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIW--DLRTSQCSL 333
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD--------REDSANHMVVTGALRG 341
++E V +A+S DG ++ +G+ DR++ VWD R DS N G G
Sbjct: 334 TLSIE---DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE---NG--NG 385
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQ-RG-SDGRFGCLAVLEGHTKPVKSLTAVTE 397
H ++ + N + SGS DRTV++W G SD + C GH V S+ T
Sbjct: 386 HEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCC-TP 444
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
+ + + SGS D + W + P
Sbjct: 445 DNEY----ILSGSKDRGVIFWDQASGNP 468
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 76/311 (24%), Positives = 135/311 (43%)
Query: 89 CINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGSVKSV 148
C+ + G + GC F + D + NT D ++SV
Sbjct: 205 CVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY---IRSV 261
Query: 149 TFC-DGKIF-TAHQDCKIRVWQXXXXXXXXXXXXXXXV---------NDRLLRFMLPNSY 197
F DGK+ T +D IR+W DRL+ S
Sbjct: 262 CFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSV 321
Query: 198 VT--VRRHKKKLWIEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKA--- 250
+R + L + D VT +AV+ +G LI + S D+++++W ++ +E + +
Sbjct: 322 RIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 251 ----HEDAVNAVAVSAGGT-VYTGSADRKIRVW-AKPFNEKRHALIATLEKHKSAVNALA 304
HED+V +VA S G + +GS DR +++W + ++K+ T HK V ++
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVC 441
Query: 305 LSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL---IN---VAGLLMS 358
+ D + SG+ DR ++ WD+ S N +++ L+GH +++ + +N G+ +
Sbjct: 442 CTPDNEYILSGSKDRGVIFWDQA-SGNPLLM---LQGHRNSVISVAVSLNSKGTEGIFAT 497
Query: 359 GSADRTVRIWQ 369
GS D RIW+
Sbjct: 498 GSGDCKARIWK 508
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 53/175 (30%), Positives = 83/175 (47%)
Query: 255 VNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
+ +V S G + TG+ D+ IR+W + KR +I L H+ + +L DG L
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIW--DLSTKR--IIKILRGHEQDIYSLDFFPDGDRLV 313
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSD 373
SG+ DRS+ +WD S +T ++ G + + L+ +GS DRTVR+W D
Sbjct: 314 SGSGDRSVRIWDLRTS--QCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVW----D 366
Query: 374 GRFGCLAV-LE-------GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
G L L+ GH V S+ A + G+ + SGSLD ++ W +
Sbjct: 367 STTGFLVERLDSGNENGNGHEDSVYSV-AFSNNGEQ----IASGSLDRTVKLWHL 416
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 74/324 (22%), Positives = 150/324 (46%)
Query: 57 QSNLSLQTLPSVPSLQKLSPDETINFSSAS--HLCINSVQLGHKLPIGCIAVHHNFLYAA 114
Q LS +T+ + ++K S E+++ L +GH PI C+ V + L +
Sbjct: 390 QHQLS-ETVYDLNIIKKNSNLESVDIVDLKIPQLKCKGTFVGHNGPIWCMTVTNGMLISG 448
Query: 115 SSH-EINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXX 173
SS ++ ++D + + ++ G V ++ ++F+ D IRVW
Sbjct: 449 SSDMKVKIWDLVTLKCKQVLSGHE-----GIVHTLAVIGNRLFSGSSDQTIRVWDLETFE 503
Query: 174 XXXXXXXXXXVNDRLLR--FMLPNSYVTVRRHKKKLW--IE--HGDA--VTGLAVNNGLI 225
V ++ ++ S+ ++ + + ++ G++ V L V+ G +
Sbjct: 504 CLSVLRDDNTVCALVIAAGYLFSGSFQHIKVWDLETFECVQTLKGNSHWVRALTVSGGYL 563
Query: 226 YSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEK 285
YS +++ +++W ++ C+++I ++ ++AVS + G+ + I VW N
Sbjct: 564 YSGAYNV-VRVWDLANFECVQTIPGGSGSIYSLAVS-NRRLLAGTYENTIVVW----NLD 617
Query: 286 RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
+I LE H AV LA+SD +SG+ D +I VW+ DS +V L H +
Sbjct: 618 TFEIINKLEGHIGAVYTLAVSDKK--FYSGSYDSTIKVWN--DS---LVCVQTLNRHTSS 670
Query: 346 ILCLINVAGLLMSGSADRTVRIWQ 369
+ ++ +G + SGSAD ++++W+
Sbjct: 671 VESIVVSSGCVFSGSADNSIKVWK 694
Score = 196 (74.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 69/287 (24%), Positives = 126/287 (43%)
Query: 142 SGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLL----RFMLPNSY 197
+G + +T +G + + D K+++W + L R +S
Sbjct: 432 NGPIWCMTVTNGMLISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLAVIGNRLFSGSSD 491
Query: 198 VTVRRHKKKLW-----IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHE 252
T+R + + + + V L + G ++S S+ + +K+W C++++K +
Sbjct: 492 QTIRVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSF-QHIKVWDLETFECVQTLKGNS 550
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVL 312
V A+ VS GG +Y+G A +RVW + + T+ ++ +LA+S+ L
Sbjct: 551 HWVRALTVS-GGYLYSG-AYNVVRVW----DLANFECVQTIPGGSGSIYSLAVSNRR--L 602
Query: 313 FSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGS 372
+G + +I+VW+ + + L GH A+ L SGS D T+++W +
Sbjct: 603 LAGTYENTIVVWNLDT----FEIINKLEGHIGAVYTLAVSDKKFYSGSYDSTIKVW---N 655
Query: 373 DGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
D C+ L HT V+S+ V G VFSGS D I+ W+
Sbjct: 656 DSLV-CVQTLNRHTSSVESI--VVSSG-----CVFSGSADNSIKVWK 694
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 133 NTFNDNDSSSGSVK-SVTFCDGKIFTA 158
N +N+N +SS S++ S T D +F +
Sbjct: 53 NYYNNNGASSSSIQQSETSIDTHLFVS 79
Score = 38 (18.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 130 TSINTFNDNDSSSGSVKSVTFCDGKIFTAHQ 160
TS N N S+S S + C I +HQ
Sbjct: 119 TSPNQSPINSSNSTSTNELLKCLNNISISHQ 149
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 189 (71.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 55/193 (28%), Positives = 100/193 (51%)
Query: 200 VRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVA 259
+R+HK + + A+ L V + L+ SVS D ++K+W + C+++I+ + + AVA
Sbjct: 128 IRKHKGHAGVVN--ALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVA 184
Query: 260 VSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACD 318
++ GT V+ G D I++W N H L + HK + +LA+S DG+ L S + D
Sbjct: 185 IAQQGTQVFIGGIDGAIKIWDLRNNHCSHVL----KGHKDIITSLAISKDGSSLLSNSMD 240
Query: 319 RSILVWDREDSANHM----VVTGALRGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGS 372
++ ++D + A+ + GA+ G +L + + + +GS+D+ V +W
Sbjct: 241 NTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSATG 300
Query: 373 DGRFGCLAVLEGH 385
D R+ VL GH
Sbjct: 301 DLRY----VLPGH 309
Score = 149 (57.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 214 AVTGL--AVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGTVYTG- 269
A+T L + ++ ++Y S D L W A + + K H VNA+ V G + T
Sbjct: 95 AITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSV 154
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S D ++VW + + I T+E+ K + A+A++ GT +F G D +I +WD +
Sbjct: 155 SDDCTMKVW----DSRSKDCIKTIEE-KYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRN- 208
Query: 330 ANHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIW 368
NH + L+GH I L I+ G L+S S D TVRI+
Sbjct: 209 -NHC--SHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIF 246
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 48/189 (25%), Positives = 81/189 (42%)
Query: 238 RASDLRCLE-SIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEK 295
R SDL + H V G+ + +G DR+I +W F + ++ L
Sbjct: 35 RTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLW-NVFGDVKN--YGVLNG 91
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVA 353
K A+ L S D V++ + D ++ WD +GH + L ++ V
Sbjct: 92 CKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQK----IRKHKGHAGVVNALDVLKVG 147
Query: 354 G-LLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSL 411
LL S S D T+++W R D C+ +E P+ ++ A+ ++G VF G +
Sbjct: 148 SELLTSVSDDCTMKVWDSRSKD----CIKTIE-EKYPLTAV-AIAQQG----TQVFIGGI 197
Query: 412 DGEIRAWQV 420
DG I+ W +
Sbjct: 198 DGAIKIWDL 206
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 64/211 (30%), Positives = 103/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 382 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 440
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 441 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 492
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G +K
Sbjct: 493 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPSKHQ 546
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 547 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 573
Score = 183 (69.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 359
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 360 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 413
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 414 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 466
Query: 390 KSL 392
SL
Sbjct: 467 YSL 469
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 340 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 398
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 453 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 502
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +LR + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 342
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 343 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 396
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 397 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 427
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 64/211 (30%), Positives = 103/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 382 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 440
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 441 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 492
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G +K
Sbjct: 493 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPSKHQ 546
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 547 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 573
Score = 183 (69.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 359
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 360 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 413
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 414 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 466
Query: 390 KSL 392
SL
Sbjct: 467 YSL 469
Score = 173 (66.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 340 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 398
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 453 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 502
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +L+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 342
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 343 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 396
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 397 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 427
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 340 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 398
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 399 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 450
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G K
Sbjct: 451 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPNKHQ 504
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 505 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 531
Score = 183 (69.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 259 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 317
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 318 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 371
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 372 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 424
Query: 390 KSL 392
SL
Sbjct: 425 YSL 427
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 298 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 356
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 357 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 410
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 411 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 460
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +L+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 300
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 301 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 354
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 355 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 385
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 193 (73.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 380 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 438
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 439 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 490
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G K
Sbjct: 491 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPNKHQ 544
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 545 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 571
Score = 183 (69.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 299 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 357
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 358 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 411
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 412 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 464
Query: 390 KSL 392
SL
Sbjct: 465 YSL 467
Score = 173 (66.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 338 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 396
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 397 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 450
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 451 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 500
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +L+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 340
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 341 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 394
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 395 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 425
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 187 (70.9 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 224 LIYSVSWDKSLKIW-RASDLRCLESI--KAHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D+S++IW R D +S+ + H+ V VA S G + + S D +W
Sbjct: 30 LLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K NE + TLE H++ V ++A + G +L + + D+S+ VW+ ++ + V+ L
Sbjct: 90 K--NEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS-VL 146
Query: 340 RGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
H + + ++ LL S S D TV++++ D + C A LEGH V SL A
Sbjct: 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSL-AFDP 204
Query: 398 EGQNGVVSVFSGSLDGEIRAWQ 419
GQ + S S D +R W+
Sbjct: 205 SGQR----LASCSDDRTVRIWR 222
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ + D C+ +++ HE+ V +VA +G + T S D+ + VW
Sbjct: 78 SASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ L H V + +L S + D ++ ++ E+ + V L GH
Sbjct: 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHE 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIWQR------------GSDGRFGCLAVLEG-HTKP 388
+ L + +G L S S DRTVRIW++ GS+ + C+ L G H++
Sbjct: 195 STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRT 254
Query: 389 V 389
+
Sbjct: 255 I 255
Score = 140 (54.3 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 40/150 (26%), Positives = 67/150 (44%)
Query: 245 LESIKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
L I AH D+ +A + GT+ DR +R+W + + E H+ V
Sbjct: 8 LSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGRE-GDSWICKSVLCEGHQRTVRK 66
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGS 360
+A S G L S + D + +W + + V T L GH + + LL + S
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTT--LEGHENEVKSVAWAPSGNLLATCS 124
Query: 361 ADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
D++V +W+ + + C++VL HT+ VK
Sbjct: 125 RDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL-RGHGKAI--LCLINVAGLLMSG 359
LA + GT+L S DRS+ +W RE + + L GH + + + L S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDS--WICKSVLCEGHQRTVRKVAWSPCGNYLASA 79
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
S D T IW++ D F C+ LEGH VKS+ A G N + + S D + W+
Sbjct: 80 SFDATTCIWKKNEDD-FECVTTLEGHENEVKSV-AWAPSG-NLLATC---SRDKSVWVWE 133
Query: 420 V 420
V
Sbjct: 134 V 134
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 192 (72.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 73/290 (25%), Positives = 127/290 (43%)
Query: 110 FLYAASSHEINVYD-RTGTTWTSINTFNDNDSSSGSVKSVTFC-DGK-IFTAHQDCKIRV 166
++ + ++D TG + N + + ++SV F DGK + T +D +IRV
Sbjct: 313 YVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRV 372
Query: 167 WQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYVTVRRHKK--KLW-IEHGDAVTGLAVNNG 223
W + L F + + +LW IE+G A+T + +G
Sbjct: 373 WDITTRTIRIQFAGHEQ-DIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG 431
Query: 224 L-----------IYSVSWDKSLKIW---RASDLRCLESIKAHEDAVNAVAVSAGGT-VYT 268
+ + + S DKS+++W + + LE H+D+V +VA S G + T
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVT 491
Query: 269 GSADRKIRVW--AKPF----NE--KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
GS D+ I++W A P N+ K + T E H+ V ++AL+ D + SG+ DR
Sbjct: 492 GSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRG 551
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCLIN--VAGLLMSGSADRTVRIW 368
+ WD + ++ L+GH +++ + G +GS D RIW
Sbjct: 552 VQFWDPRTGSTQLM----LQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 146 (56.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 60/206 (29%), Positives = 93/206 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
I S S D+++++W + L ++ ED V VA+S V GS D+ +RVW
Sbjct: 403 IASGSGDRTVRLWDIENGTAL-TVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGA----- 338
L + HK +V ++A S +G L +G+ D++I +W+ +M G+
Sbjct: 462 CPVERLEGP-DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRC 520
Query: 339 ---LRGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAV-LEGHTKPVKSL 392
GH +L + +MSGS DR V+ W D R G + L+GH V S+
Sbjct: 521 VKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFW----DPRTGSTQLMLQGHKNSVISV 576
Query: 393 TAVTEEGQNGVVSVFSGSLDGEIRAW 418
A + G G + SG D R W
Sbjct: 577 -APSPTG--GFFATGSG--DMRARIW 597
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/168 (26%), Positives = 79/168 (47%)
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
+ +V S G + TG+ D++IRVW + + H+ + +L + DG +
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVW----DITTRTIRIQFAGHEQDIYSLDFARDGRTIA 404
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSD 373
SG+ DR++ +WD E+ V T G + + + +GS D++VR+W
Sbjct: 405 SGSGDRTVRLWDIENGTALTVFTIE---DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
L +GH V S+ A + G++ V +GSLD I+ W+++
Sbjct: 462 CPVERLEGPDGHKDSVYSV-AFSPNGRDLV----TGSLDKTIKLWELA 504
Score = 126 (49.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 49/196 (25%), Positives = 81/196 (41%)
Query: 238 RASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHK 297
R D+ + +++ HE V V SA G +R +++ EK + L+
Sbjct: 286 RVLDVDLVHTLQ-HESVVCCVRFSADGKYVATGCNRSAQIFDVNTGEK----VCVLQDDN 340
Query: 298 SA------VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-- 349
+ + ++ S DG L +GA D+ I VWD + GH + I L
Sbjct: 341 ADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWD----ITTRTIRIQFAGHEQDIYSLDF 396
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
+ SGS DRTVR+W + + +G T A++ + + V +G
Sbjct: 397 ARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTT-----VAISPDTKY----VAAG 447
Query: 410 SLDGEIRAWQVSVSCP 425
SLD +R W ++ CP
Sbjct: 448 SLDKSVRVWDLTQGCP 463
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 193 (73.0 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 460 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 518
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 519 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 570
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G K
Sbjct: 571 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPNKHQ 624
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 625 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 651
Score = 183 (69.5 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 379 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 437
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 438 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 491
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 492 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 544
Query: 390 KSL 392
SL
Sbjct: 545 YSL 547
Score = 173 (66.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 418 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 476
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 477 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 530
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 531 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 580
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +L+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 420
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 421 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 474
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 475 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 505
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 465 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 523
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 524 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 575
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G K
Sbjct: 576 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPNKHQ 629
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 630 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 656
Score = 183 (69.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 384 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 442
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 443 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 496
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 497 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 549
Query: 390 KSL 392
SL
Sbjct: 550 YSL 552
Score = 173 (66.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 423 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 481
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 482 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 535
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 536 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 585
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR +L+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 425
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 426 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 479
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 480 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 510
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 188 (71.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H + G+A+ G ++SVS D +L++W + +C+ SI DA +S G V+
Sbjct: 130 HNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL--DAEAGSLISEGPWVFL 187
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
G + I+ + ++ H A + VNA+ +++ +LF+G SILVW
Sbjct: 188 GLPNA-IKAFNVQTSQDLHLQAAGVV---GQVNAMTIANG--MLFAGTSSGSILVWKATT 241
Query: 328 DS-ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
DS ++ +L GH + C +L SGS D+T+++W + C+ L+ HT
Sbjct: 242 DSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNT---LQCIMTLKQHT 298
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
V SL + + S SLDG I+ W S
Sbjct: 299 GTVTSLLCWDK-------CLISSSLDGTIKVWAYS 326
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 55/214 (25%), Positives = 98/214 (45%)
Query: 215 VTGLAVNNGLIYSVSWDKSLKIWRA-----SD-LRCLESIKAHEDAVNAVAVSAGGTVYT 268
V + + NG++++ + S+ +W+A SD + L S++ H V AV G +Y+
Sbjct: 215 VNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG-GQMLYS 273
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GS D+ I++W N + I TL++H V +L D L S + D +I VW +
Sbjct: 274 GSVDKTIKMW--DLNTLQ--CIMTLKQHTGTVTSLLCWDK--CLISSSLDGTIKVWAYSE 327
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLE-GHTK 387
+ VV R ++ L +G+ + + +Q G+ G F + E G
Sbjct: 328 NGILKVVQ-TRRQEQSSVHAL---SGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMF 383
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
++ +T G G++ FSG G +R W ++
Sbjct: 384 STHTIATLTI-GPQGLL--FSGDESGNLRVWTLA 414
Score = 135 (52.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 45/163 (27%), Positives = 77/163 (47%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H VT AV ++YS S DK++K+W + L+C+ ++K H V ++ + + + S
Sbjct: 257 HSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL-LCWDKCLISSS 315
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT---VLFSGACDRSILVWDRE 327
D I+VWA N ++ T + +S+V+AL+ D ++F + ++ ++D
Sbjct: 316 LDGTIKVWAYSENGILK-VVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLP 374
Query: 328 D--SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
M T H A L I GLL SG +R+W
Sbjct: 375 SFQERGRMFST-----HTIATLT-IGPQGLLFSGDESGNLRVW 411
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 167 (63.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
L S S D S++ W S L+C ++ AH +V V+ S G + +G D + +W+
Sbjct: 78 LFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSI-- 135
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ AL+ L+ H +AV + S D + +G+ DR++ VW D VV L+GH
Sbjct: 136 --QSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVV---LQGH 190
Query: 343 GKAILCL-INVAGLLMS 358
+ CL +VAG+L+S
Sbjct: 191 LGNVACLCFSVAGMLVS 207
Score = 161 (61.7 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 234 LKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIAT 292
L +W+ S + L S+ H V S+ G ++ + S D +R W + H L A
Sbjct: 46 LYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTA- 104
Query: 293 LEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-- 350
H+ +V ++ S DG L SG D L+W + A + L+GH A+ +
Sbjct: 105 ---HRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGA----LLEELKGHNAAVQSSVFS 157
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
+ + + +GS DR VR+W+ R VL+GH V L
Sbjct: 158 SDSQSVATGSWDRAVRVWKLRD--RQAEAVVLQGHLGNVACL 197
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 191 (72.3 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V + ++ + S S D +L++W +CL + H AV V G V +G+
Sbjct: 513 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGA 571
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D ++VW P E + TL+ H + V +L DG + SG+ D SI VWD E
Sbjct: 572 YDFMVKVW-DPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE--T 623
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPV 389
+ + T L GH + +L+SG+AD TV+IW D + G CL L+G K
Sbjct: 624 GNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVKIW----DIKTGQCLQTLQGPHKHQ 677
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
++T + + +N V++ S DG ++ W +
Sbjct: 678 SAVTCL-QFNKNFVIT---SSDDGTVKLWDL 704
Score = 183 (69.5 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 211 HGD-AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H D +T L I S S D +LK+W A +CL ++ H V + + + +G
Sbjct: 432 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISG 490
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S DR ++VW N + I TL H S V + L + V SG+ D ++ VWD E
Sbjct: 491 STDRTLKVW----NAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETG 544
Query: 330 ANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
V L GH A+ C+ ++SG+ D V++W ++ CL L+GHT V
Sbjct: 545 QCLHV----LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRV 597
Query: 390 KSL 392
SL
Sbjct: 598 YSL 600
Score = 173 (66.0 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
+ H V + + +I S S D++LK+W A C+ ++ H V + + V +
Sbjct: 471 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-S 529
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE- 327
GS D +RVW + H L+ H +AV + DG + SGA D + VWD E
Sbjct: 530 GSRDATLRVWDIETGQCLHVLMG----HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 583
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEGH 385
++ H L+GH + L G+ ++SGS D ++R+W D G C+ L GH
Sbjct: 584 ETCLH-----TLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVW----DVETGNCIHTLTGH 633
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR DL+ + +K H+D V G + +GS D ++VW+ + + TL H
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGH 473
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V + + D+ ++ SG+ DR++ VW+ E + T L GH + C+ +
Sbjct: 474 TGGVWSSQMRDN--IIISGSTDRTLKVWNAE--TGECIHT--LYGHTSTVRCMHLHEKRV 527
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+SGS D T+R+W + G+ CL VL GH V+
Sbjct: 528 VSGSRDATLRVWDIET-GQ--CLHVLMGHVAAVR 558
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 178 (67.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 54/184 (29%), Positives = 90/184 (48%)
Query: 242 LRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
L C +++ H ++++ S G + T SAD+ +++W N TL HK V
Sbjct: 79 LMC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW----NMDHMICERTLTGHKLGV 132
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INV-AGLLMS 358
N +A S D + S + D+++ +++ S +T L+GH + C N + L++S
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 359 GSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
GS D +VRIW D + G C+ L H+ PV S + +G + SGS DG +R
Sbjct: 189 GSFDESVRIW----DVKTGMCIKTLPAHSDPV-SAVSFNRDGS----LIASGSYDGLVRI 239
Query: 418 WQVS 421
W +
Sbjct: 240 WDTA 243
Score = 175 (66.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/210 (28%), Positives = 101/210 (48%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAK 280
+ L+ S S+D+S++IW C++++ AH D V+AV+ + G+ + +GS D +R+W
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW-- 240
Query: 281 PFNEKRHALIATL-EKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ I TL + V + S +G + + D ++ +WD TG
Sbjct: 241 --DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG-- 296
Query: 340 RGHGKAILCLI---NVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
H + C+ +V G ++SGS D + IW + CL EGHT+PV L +
Sbjct: 297 --HENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCL---EGHTQPV--LAS 349
Query: 395 VTEEGQNGVVSVFSGSL--DGEIRAWQVSV 422
QN +++ SG+L D +I W+ V
Sbjct: 350 DCHPVQN-IIA--SGALEPDNKIHIWRSDV 376
Score = 152 (58.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 49/195 (25%), Positives = 86/195 (44%)
Query: 229 SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHA 288
S DK++KIW + C ++ H+ VN +A S+ ++D K K F
Sbjct: 106 SADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKT---LKIFEIVTSR 162
Query: 289 LIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
+ TL+ H + V + +++ SG+ D S+ +WD + M + L H +
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG---MCIK-TLPAHSDPVSA 218
Query: 349 L-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+ N G L+ SGS D VRIW ++G+ C+ L P + + G+ +
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIWDT-ANGQ--CIKTLVDDENPPVAFVKFSPNGKY----I 271
Query: 407 FSGSLDGEIRAWQVS 421
+ +LD ++ W S
Sbjct: 272 LASNLDSTLKLWDFS 286
Score = 145 (56.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
+ S S DK+LKI+ R +++K H + V + + V +GS D +R+W +
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW----D 199
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
K I TL H V+A++ + DG+++ SG+ D + +WD +AN + +
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD---TANGQCIKTLVDDEN 256
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ + + G +++ + D T+++W S G+ L GH + A
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDF-SKGK--TLKQYTGHENSKYCIFA--NFSVT 311
Query: 402 GVVSVFSGSLDGEIRAWQV 420
G + SGS D +I W +
Sbjct: 312 GGKWIISGSEDCKIYIWNL 330
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 75 SPDETINFSSASHLCINSVQLGHKLPIGCIA 105
S D+T+ + H+ GHKL + IA
Sbjct: 106 SADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 178 (67.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 54/184 (29%), Positives = 90/184 (48%)
Query: 242 LRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
L C +++ H ++++ S G + T SAD+ +++W N TL HK V
Sbjct: 79 LMC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW----NMDHMICERTLTGHKLGV 132
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INV-AGLLMS 358
N +A S D + S + D+++ +++ S +T L+GH + C N + L++S
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 359 GSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
GS D +VRIW D + G C+ L H+ PV S + +G + SGS DG +R
Sbjct: 189 GSFDESVRIW----DVKTGMCIKTLPAHSDPV-SAVSFNRDGS----LIASGSYDGLVRI 239
Query: 418 WQVS 421
W +
Sbjct: 240 WDTA 243
Score = 175 (66.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/210 (28%), Positives = 101/210 (48%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAK 280
+ L+ S S+D+S++IW C++++ AH D V+AV+ + G+ + +GS D +R+W
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW-- 240
Query: 281 PFNEKRHALIATL-EKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ I TL + V + S +G + + D ++ +WD TG
Sbjct: 241 --DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG-- 296
Query: 340 RGHGKAILCLI---NVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
H + C+ +V G ++SGS D + IW + CL EGHT+PV L +
Sbjct: 297 --HENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCL---EGHTQPV--LAS 349
Query: 395 VTEEGQNGVVSVFSGSL--DGEIRAWQVSV 422
QN +++ SG+L D +I W+ V
Sbjct: 350 DCHPVQN-IIA--SGALEPDNKIHIWRSDV 376
Score = 152 (58.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 49/195 (25%), Positives = 86/195 (44%)
Query: 229 SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHA 288
S DK++KIW + C ++ H+ VN +A S+ ++D K K F
Sbjct: 106 SADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKT---LKIFEIVTSR 162
Query: 289 LIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
+ TL+ H + V + +++ SG+ D S+ +WD + M + L H +
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG---MCIK-TLPAHSDPVSA 218
Query: 349 L-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+ N G L+ SGS D VRIW ++G+ C+ L P + + G+ +
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIWDT-ANGQ--CIKTLVDDENPPVAFVKFSPNGKY----I 271
Query: 407 FSGSLDGEIRAWQVS 421
+ +LD ++ W S
Sbjct: 272 LASNLDSTLKLWDFS 286
Score = 145 (56.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
+ S S DK+LKI+ R +++K H + V + + V +GS D +R+W +
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW----D 199
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
K I TL H V+A++ + DG+++ SG+ D + +WD +AN + +
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD---TANGQCIKTLVDDEN 256
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ + + G +++ + D T+++W S G+ L GH + A
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDF-SKGK--TLKQYTGHENSKYCIFA--NFSVT 311
Query: 402 GVVSVFSGSLDGEIRAWQV 420
G + SGS D +I W +
Sbjct: 312 GGKWIISGSEDCKIYIWNL 330
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 75 SPDETINFSSASHLCINSVQLGHKLPIGCIA 105
S D+T+ + H+ GHKL + IA
Sbjct: 106 SADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 180 (68.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 53/178 (29%), Positives = 88/178 (49%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
LI S S D S+++W + +CL +K H+ +V V+ S + +G D++ VW
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ H L+ H ++ + S L +G+ D ++ +WD S +V L GH
Sbjct: 142 GRRVHLLVG----HCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTP-VVSYHNLEGH 196
Query: 343 GKAILCLI-NVAGLLMSGSADRTVRIWQRGSDGRFGCLAV-LEGHTKPVKSLTAVTEE 398
I CL + +GLL SGS D+T+ +W+ ++ L + L+GHT V SL +E
Sbjct: 197 TGNISCLCYSASGLLASGSWDKTICVWKPTTNN----LPLQLKGHTIWVNSLAFSPDE 250
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 58/228 (25%), Positives = 98/228 (42%)
Query: 211 HGDA-VTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYT 268
HG+ + + + + + S D + +W R L + H V + S G + +
Sbjct: 26 HGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIAS 85
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
S+D IR+W + R + L+ H+ +V ++ S D L SG D+ +VW+ +
Sbjct: 86 SSSDHSIRLW----DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 329 SAN-HMVVTGALRGHGKAILC--LINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
H++V GH +I + L +GS D TV IW + LEGH
Sbjct: 142 GRRVHLLV-----GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQ 433
T + L +G+++ SGS D I W+ + N+ PL L+
Sbjct: 197 TGNISCLCY----SASGLLA--SGSWDKTICVWKPTT---NNLPLQLK 235
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/188 (27%), Positives = 82/188 (43%)
Query: 251 HEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H VN A S G T+ T S D + VW K L+ L H+ V + S DG
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGT----KSGRLLWRLAGHRGPVKSCCFSPDG 80
Query: 310 TVLFSGACDRSILVWD-REDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVR 366
++ S + D SI +WD H+ L+GH +++ + + L SG D+
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHV-----LKGHQRSVETVSFSPDSKQLASGGWDKRAI 135
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLT-AVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
+W+ S R + +L GH ++S + T + S+ +GS D + W + S P
Sbjct: 136 VWEVQSGRR---VHLLVGHCDSIQSSDFSPTSD------SLATGSWDSTVHIWDLRASTP 186
Query: 426 NSSPLNLQ 433
S NL+
Sbjct: 187 VVSYHNLE 194
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 48/161 (29%), Positives = 76/161 (47%)
Query: 207 LWIEHGDAV--TGLAVNNGLIYSVSWDKSLKIW--RASD-LRCLESIKAHEDAVNAVAVS 261
L + H D++ + + + + + SWD ++ IW RAS + +++ H ++ + S
Sbjct: 147 LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS 206
Query: 262 AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
A G + +GS D+ I VW KP L L+ H VN+LA S D L S R++
Sbjct: 207 ASGLLASGSWDKTICVW-KPTTNN---LPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAG-LLMSGSA 361
VWD + G L A C+ G LL+SG+A
Sbjct: 263 KVWDCLTGKCLETLKGML---DVAHACIFTPDGKLLVSGAA 300
Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 295 KHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH-GKAILCLINVA 353
+H VN A S DG L + + D + VW + + L GH G C +
Sbjct: 24 QHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGR----LLWRLAGHRGPVKSCCFSPD 79
Query: 354 G-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
G L+ S S+D ++R+W R CL VL+GH + V++++ + Q + SG D
Sbjct: 80 GRLIASSSSDHSIRLWDVA---RSKCLHVLKGHQRSVETVSFSPDSKQ-----LASGGWD 131
Query: 413 GEIRAWQV 420
W+V
Sbjct: 132 KRAIVWEV 139
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFNEK 285
S WDK +W R + + H D++ + S ++ TGS D + +W +
Sbjct: 127 SGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTP 186
Query: 286 RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
+ LE H ++ L S G +L SG+ D++I VW + + N++ + L+GH
Sbjct: 187 VVSY-HNLEGHTGNISCLCYSASG-LLASGSWDKTICVW--KPTTNNLPLQ--LKGHTIW 240
Query: 346 ILCLINVAGLLMSGSA--DRTVRIWQRGSDGRFGCLAVLEG 384
+ L L SA RTV++W + G+ CL L+G
Sbjct: 241 VNSLAFSPDELKLASAGYSRTVKVWDCLT-GK--CLETLKG 278
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 61/211 (28%), Positives = 99/211 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
++ S S D ++K+W + ++K H DAVN +A+ A G + + S+D I++W F
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLW--DF 177
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ L +L+ H+ V+++ G + S + D +I WD S + V T RGH
Sbjct: 178 GQTYDCL-KSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI--STGYCVYT--FRGH 232
Query: 343 GKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL-----TAV 395
+ + + N L S S D+TV +W + VL H V+ + TA
Sbjct: 233 NDWVRMIRISNDGTLFASASLDQTVTVWSFATKS---AKLVLRDHEHAVECVEWAPDTAY 289
Query: 396 TE-EGQ----NGVVSVFSGSLDGEIRAWQVS 421
T GQ N +FSGS D I+AW ++
Sbjct: 290 TNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 63/229 (27%), Positives = 102/229 (44%)
Query: 210 EHG-DAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
EH +VT L + + S S D ++K W S C+ + + H D V + +S GT++
Sbjct: 191 EHTVSSVTFLPTGD-FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFA 249
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDD------------GT---VL 312
+ S D+ + VW+ F K L+ L H+ AV + + D G +L
Sbjct: 250 SASLDQTVTVWS--FATKSAKLV--LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHIL 305
Query: 313 FSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQR 370
FSG+ DRSI W+ N V L H + L + G L+S + D+T+R+W+
Sbjct: 306 FSGSRDRSIKAWN----INTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Query: 371 GSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
+ C+ +E H V S A + V +GS+D + W+
Sbjct: 362 SAQR---CMKAIEAHEHFV-STVAFHQTSP----FVITGSVDMSCKVWE 402
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 209 IEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGT 265
+ H + V GLA + G + SV+ DK+L++W S RC+++I+AHE V+ VA
Sbjct: 329 LAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPF 388
Query: 266 VYTGSADRKIRVW 278
V TGS D +VW
Sbjct: 389 VITGSVDMSCKVW 401
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 293 LEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-IN 351
L H+ + + T++ S + D +I VWD E + L+GH A+ + I+
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQ----LERTLKGHTDAVNDIAID 157
Query: 352 VAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGS 410
AG L+S S+D ++++W G + CL L+GH V S+T + G V S S
Sbjct: 158 AAGKQLVSCSSDLSIKLWDFGQT--YDCLKSLKGHEHTVSSVTFLPT-GD----FVLSAS 210
Query: 411 LDGEIRAWQVS 421
D I+ W +S
Sbjct: 211 RDHTIKQWDIS 221
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/203 (26%), Positives = 94/203 (46%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ +I S S+D++++IW + +CL+ + AH D V AV + G++ S+ D R+W
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
H + ++ V+ + S +G + G D ++ +W+ SA +
Sbjct: 185 GTG---HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS-SAKFLKT---YT 237
Query: 341 GHGKAILCLINVAGL-----LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAV 395
GH A C+ + + ++SGS D V +W+ S L LEGHT+ V ++
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKK---LLQKLEGHTETVMNVACH 294
Query: 396 TEEGQNGVVSVFSGSLDGEIRAW 418
E + SGSLD +R W
Sbjct: 295 PTENL-----IASGSLDKTVRIW 312
Score = 141 (54.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 53/229 (23%), Positives = 103/229 (44%)
Query: 203 HKKKLWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRC-----LESIKAHEDAV 255
H + L H AV+ + ++ L+ S S DK+++ + + + ++ HE+ +
Sbjct: 16 HSQTL-TSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 256 NAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFS 314
+ VA S+ + + S D+ +++W + + +LI TL H + + + ++ S
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLW----DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVS 130
Query: 315 GACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGS 372
G+ D ++ +WD + + V L H + + N G L++S S D RIW G+
Sbjct: 131 GSFDETVRIWD-VTTGKCLKV---LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 373 DGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G C+ L P S + G+ + G+LD +R W +S
Sbjct: 187 -GH--CVKTLIDDENPPVSFVRFSPNGK----FILVGTLDNTLRLWNIS 228
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 48/171 (28%), Positives = 85/171 (49%)
Query: 204 KKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAV-NAVAV 260
K + I H ++ + N LI + S DK+ K+W A++ +C+ ++ H+D + ++
Sbjct: 253 KVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFD 312
Query: 261 SAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
G + T SAD R+ F+ IA LE H+ ++ ++ + G L +G+ D++
Sbjct: 313 YTGKLIATASADGTARI----FSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKT 368
Query: 321 ILVWDREDSANHMVVTGALRGHGKAIL-CLINVAG-LLMSGSADRTVRIWQ 369
+WD + V L GH I C N G ++++GS D T RIW+
Sbjct: 369 ARIWDAQTGQCLQV----LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 56/214 (26%), Positives = 106/214 (49%)
Query: 215 VTGLAVN-NGLIYSV-SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGS 270
+T +A+N +G + S+D++ K+W + L +++ H + V A+A + G + TGS
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ ++W+ + H T H + + L+ + T++ +G+ D + +WD ++
Sbjct: 155 FDKTCKLWSVETGKCYH----TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 210
Query: 331 NHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
V T LRGH I+ L N +G +++GS D TV +W + GR + +L GH
Sbjct: 211 E--VYT--LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT-GRK--VNILIGHCAE 263
Query: 389 VKSLTAVTEEGQNGVVS-VFSGSLDGEIRAWQVS 421
+ S + N S + +GS+D + W +
Sbjct: 264 ISSASF------NWDCSLILTGSMDKTCKLWDAT 291
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/181 (27%), Positives = 90/181 (49%)
Query: 211 HGDAVTGLAVNNGL---IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-V 266
H + V +A NN I + S+DK+ K+W +C + + H + ++ + T V
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV 192
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D ++W E+ + TL H + + +L+ + G + +G+ D +++VWD
Sbjct: 193 ATGSMDTTAKLWDIQNGEE----VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA 248
Query: 327 EDSANHMVVTGALRGHGKAILCL-INV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
D+ + + L GH I N L+++GS D+T ++W ++G+ C+A L G
Sbjct: 249 -DTGRKVNI---LIGHCAEISSASFNWDCSLILTGSMDKTCKLWD-ATNGK--CVATLTG 301
Query: 385 H 385
H
Sbjct: 302 H 302
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAG-GTVY 267
H + L+ N I + S+D ++ +W A R + + H +++ + + +
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLIL 277
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TGS D+ ++W N K +ATL H + G ++ + + D + ++
Sbjct: 278 TGSMDKTCKLWDAT-NGK---CVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS-- 331
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAGL-LMSGSADRTVRIWQRGSDGRFG-CLAVLEG 384
+A + L GH G+ N G L++GS+D+T RIW D + G CL VLEG
Sbjct: 332 -AATRKCIA-KLEGHEGEISKISFNPQGNHLLTGSSDKTARIW----DAQTGQCLQVLEG 385
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
HT + S A +G V +GS D R W+
Sbjct: 386 HTDEIFSC-AFNYKGN----IVITGSKDNTCRIWR 415
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 187 (70.9 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 63/218 (28%), Positives = 98/218 (44%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY--TGSADRKIRVWAKPF 282
+ S S D++++IW +C ++ ED V VAVS G Y GS DR +RVW
Sbjct: 500 LVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 558
Query: 283 NEKRHALIATLEK---HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV---- 335
L + E HK +V ++ + DG + SG+ DRS+ +W+ +++ N
Sbjct: 559 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 618
Query: 336 TGALR----GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+G GH +L + ++SGS DR V W + S L +L+GH V
Sbjct: 619 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP---LLMLQGHRNSV 675
Query: 390 KSLTAVTEEGQNGVVSVFS-GSLDGEIRAWQVSVSCPN 426
S+ +VF+ GS D + R W+ PN
Sbjct: 676 ISVAVANGSPLGPEYNVFATGSGDCKARIWKYKKIAPN 713
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/242 (26%), Positives = 99/242 (40%)
Query: 193 LPNSYVTVRRHKKKLWIEHGDAVTGLAVNN-GLIYSVSWDKSLKIWRASD----LRCLES 247
LP + V HK ++H V + +N G + +K+ +++R SD R +
Sbjct: 329 LPRE-IDVELHKS---LDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDD 384
Query: 248 IKA--HEDAV--NAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA---- 299
A H +++ N S T + I A + + L S
Sbjct: 385 SAANNHRNSITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDL 444
Query: 300 -VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLL 356
+ ++ S DG L +GA DR I +WD E N +V L+GH + I L L
Sbjct: 445 YIRSVCFSPDGKFLATGAEDRLIRIWDIE---NRKIVM-ILQGHEQDIYSLDYFPSGDKL 500
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIR 416
+SGS DRTVRIW + L++ +G T T G ++ +GSLD +R
Sbjct: 501 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVT------TVAVSPGDGKYIA--AGSLDRAVR 552
Query: 417 AW 418
W
Sbjct: 553 VW 554
Score = 42 (19.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 12/61 (19%), Positives = 30/61 (49%)
Query: 89 CINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGSVKSV 148
C + Q+ +++ G + + AA++H ++ + TT T NT +++ + ++
Sbjct: 363 CNKTTQV-YRVSDGSLVARLSDDSAANNHRNSITENNTTTSTDNNTMTTTTTTTITTTAM 421
Query: 149 T 149
T
Sbjct: 422 T 422
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 179 (68.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 62/219 (28%), Positives = 103/219 (47%)
Query: 224 LIYSVSWDKSLKIWRAS-DLRCLESI--KAHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D+ ++IW D +S+ + H+ V VA S G + + S D +W
Sbjct: 30 LLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K N+ + TLE H++ V ++A + G +L + + D+S+ VW+ ++ + V+ L
Sbjct: 90 K--NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS-VL 146
Query: 340 RGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
H + + ++ LL S S D TV+++Q D + C A LEGH V S+ A
Sbjct: 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVCCATLEGHESTVWSI-AFDP 204
Query: 398 EGQNGVVSVFSGSLDGEIRAW-------QVSVSCPNSSP 429
GQ + S S D +R W + V+C S P
Sbjct: 205 SGQR----LASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ + D C+ +++ HE+ V +VA +G + T S D+ + VW
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ L H V + +L S + D ++ ++ E + V L GH
Sbjct: 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE--GDDWVCCATLEGHE 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIWQR------------GSDGRFGCLAVLEG-HTKP 388
+ + + +G L S S DRTVRIW++ GSD + C+ L G HT+
Sbjct: 195 STVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRT 254
Query: 389 V 389
+
Sbjct: 255 I 255
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 241 DLRCLES-IKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHK 297
D L+S + AH D+ +A + GT+ DRKIR+W + + + E H+
Sbjct: 3 DALVLQSRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLS-EGHQ 61
Query: 298 SAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGL 355
V +A S G L S + D + +W + V T L GH + + L
Sbjct: 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNL 119
Query: 356 LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
L + S D++V +W+ + + C++VL HT+ VK + V Q + S S D +
Sbjct: 120 LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV--VWHPSQELLASA---SYDDTV 174
Query: 416 RAWQ 419
+ +Q
Sbjct: 175 KLYQ 178
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 179 (68.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 59/204 (28%), Positives = 89/204 (43%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--VYTGSADRKIRVWAKPF 282
I++ S DK+L W + + K H + VN+V S G + +GS DR I++W
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA-- 170
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
K+HA TLE V A+ D G + SG D + +WD A V LRGH
Sbjct: 171 -RKKHAA-HTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQA----VLHHLRGH 223
Query: 343 GKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKS--LTAVTE 397
I + L +++ + D T+R+W R C+ V +GH + L
Sbjct: 224 SDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWS 283
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVS 421
G + + S GS D + W V+
Sbjct: 284 PGSDKITS---GSADRHVYIWDVN 304
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 211 HGD---AVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTV 266
HG+ +V G L+ S S D+++KIW A ++++ V AV G V
Sbjct: 139 HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQV 197
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+G D ++++W + ++ A++ L H + ++LS +G + + A D ++ VWD
Sbjct: 198 ISGGIDNEVKIW----DIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Query: 327 EDSANHMVVTGALRGHG----KAIL-CLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLA 380
A +GH K +L C + + SGSADR V IW + R L
Sbjct: 254 RPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTR-RI--LY 310
Query: 381 VLEGHTKPVKSL 392
L GH V ++
Sbjct: 311 KLPGHNGSVNAV 322
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/206 (23%), Positives = 92/206 (44%)
Query: 224 LIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKP 281
L+ S +D+ + IW+ D + ++ H AV + G+ ++T S D+ + W
Sbjct: 69 LLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIA 128
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGT-VLFSGACDRSILVWD-REDSANHMVVTGAL 339
+++ + H + VN++ S G +L SG+ DR+I +WD R+ A H + +
Sbjct: 129 TGQRQRRF----KGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESP-- 182
Query: 340 RGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
+C + ++SG D V+IW L L GH+ + ++ ++ EG
Sbjct: 183 --FQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQA---VLHHLRGHSDTITGMS-LSPEG 236
Query: 400 QNGVVSVFSGSLDGEIRAWQVSVSCP 425
+ + ++D +R W V P
Sbjct: 237 D----FILTNAMDNTLRVWDVRPYAP 258
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/142 (26%), Positives = 65/142 (45%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVW-AKPFNE-KRH 287
D +KIW L ++ H D + +++S G + T + D +RVW +P+ +R
Sbjct: 203 DNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERC 262
Query: 288 ALIATLEKHKSAVNAL--ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
+ +H N L A S + SG+ DR + +WD N + L GH +
Sbjct: 263 VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD----VNTRRILYKLPGHNGS 318
Query: 346 ILCL--INVAGLLMSGSADRTV 365
+ + L++SGS+D+T+
Sbjct: 319 VNAVDFSPKEPLILSGSSDKTL 340
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWR----ASDLRCLESIKAH----EDAVNAVAV 260
H D +TG++++ G I + + D +L++W A RC++ + H E + A
Sbjct: 223 HSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAW 282
Query: 261 SAGGTVYT-GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR 319
S G T GSADR + +W N +R ++ L H +VNA+ S ++ SG+ D+
Sbjct: 283 SPGSDKITSGSADRHVYIW--DVNTRR--ILYKLPGHNGSVNAVDFSPKEPLILSGSSDK 338
Query: 320 SILVWDRED 328
++ + + ++
Sbjct: 339 TLYLGEIDE 347
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 117 (46.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 37/172 (21%), Positives = 77/172 (44%)
Query: 210 EHGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDA-VNAVAVSAGGTV 266
+H V L + N G + S ++ W + C + ED ++++ V + G++
Sbjct: 122 DHKSPVNDLLIHPNQGELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSM 181
Query: 267 Y-TGSADRKIRVWAKPFNEKRHALIATLEK---HKSAVNALALSDDGTVLFSGACDRSIL 322
G+ VW + N + +L+ + K H+ + LS D L + + D ++
Sbjct: 182 LIAGNNKGNCYVW-RMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVN 240
Query: 323 VWDREDSANHMVVTGALRGHGKAIL-CLINV-AGLLMSGSADRTVRIWQRGS 372
+W ED + ++ L+GH + + C + + L++ S+D R+W+ S
Sbjct: 241 IWSTEDMS--FMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSS 290
Score = 106 (42.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 77 DETINFSSA-SHLCINSVQ-LGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINT 134
D TI F A S +C ++Q ++ CI+ FL AA + + +YD ++ + T
Sbjct: 19 DHTIRFWEALSGICSRTIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQMPLMT 78
Query: 135 FNDNDSSSGSVKSVTF-CDGK-IFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLL 189
F + + +V ++ F CDGK + T+ +D ++VW VND L+
Sbjct: 79 F---EGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLI 132
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 182 (69.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFN 283
L+ S S D ++ IW + R L+ H D V V VS + + S D RVW
Sbjct: 275 LLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN-YIISSSRDHTARVWRLDAT 333
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
A + L H ++VN++ S ++ + + DR++ WD + H + + H
Sbjct: 334 SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDI--TTGHCI--RIIHAHQ 389
Query: 344 KAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGV 403
+ I C ++SGS+D T+RI++ S G+ L +L+GH ++++ E+
Sbjct: 390 RGIACAQYNGKFIVSGSSDLTIRIFE-ASSGKL--LRMLQGHEDLIRTVRFNDEK----- 441
Query: 404 VSVFSGSLDGEIRAW 418
+ SG DG +R W
Sbjct: 442 --IVSGGYDGTVRIW 454
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 202 RHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLR----CLESIKAHEDAVNA 257
R K++ H D V G+ V+ I S S D + ++WR C+ ++ H +VN+
Sbjct: 293 RRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNS 352
Query: 258 VAVSAG-GTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGA 316
V S+ G + T S+DR +R W H I + H+ + A A +G + SG+
Sbjct: 353 VQYSSKTGLIVTASSDRTLRTWDITTG---HC-IRIIHAHQRGI-ACA-QYNGKFIVSGS 406
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
D +I ++ E S+ ++ L+GH I + ++SG D TVRIW
Sbjct: 407 SDLTIRIF--EASSGKLL--RMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIW 454
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 44/177 (24%), Positives = 80/177 (45%)
Query: 246 ESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL 305
+ +A D+V V + +GS DR + VW N + ++ L H +V L
Sbjct: 215 QDFRATLDSVYCVQYD-DEIMVSGSKDRTVSVW--DVNSR--FILYKLYGHSGSVLCLDF 269
Query: 306 SDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTV 365
+L SG+ D +I++WD ++ V G H +L ++ ++S S D T
Sbjct: 270 CRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFG----HTDNVLGVVVSENYIISSSRDHTA 325
Query: 366 RIWQRGSDGRF-GCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
R+W+ + C+ VL GH + S+ +V + G++ + S D +R W ++
Sbjct: 326 RVWRLDATSPAEACMHVLRGH---LASVNSVQYSSKTGLI--VTASSDRTLRTWDIT 377
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 308 DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTV 365
D ++ SG+ DR++ VWD N + L GH ++LCL LL+SGS+D T+
Sbjct: 230 DDEIMVSGSKDRTVSVWD----VNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTI 285
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
IW + R L V GHT V L V E + S S D R W++ + P
Sbjct: 286 IIWD-WQNRR--PLKVYFGHTDNV--LGVVVSENY-----IISSSRDHTARVWRLDATSP 335
Query: 426 NSSPLNLQKWNL 437
+ +++ + +L
Sbjct: 336 AEACMHVLRGHL 347
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 57/236 (24%), Positives = 99/236 (41%)
Query: 123 DRTGTTWTSINTF--NDNDSSSGSVKSVTFCDGK--IFTAHQDCKIRVWQXXXXXXXXXX 178
DRT + W + F SGSV + FC + + + D I +W
Sbjct: 240 DRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVY 299
Query: 179 XXXXXVNDRLLRFMLPNSYV--TVRRHKKKLW----IEHGDA----VTG-LA-VNN---- 222
D +L ++ +Y+ + R H ++W +A + G LA VN+
Sbjct: 300 FGHT---DNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYS 356
Query: 223 ---GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWA 279
GLI + S D++L+ W + C+ I AH+ + A A G + +GS+D IR+
Sbjct: 357 SKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGI-ACAQYNGKFIVSGSSDLTIRI-- 413
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVV 335
F L+ L+ H+ + + +D+ V SG D ++ +W+ H V+
Sbjct: 414 --FEASSGKLLRMLQGHEDLIRTVRFNDEKIV--SGGYDGTVRIWNFNTGEQHCVL 465
Score = 116 (45.9 bits), Expect = 0.00093, P = 0.00093
Identities = 48/212 (22%), Positives = 97/212 (45%)
Query: 213 DAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAG-GTVYTGSA 271
D+V + ++ ++ S S D+++ +W + L + H +V + + +GS+
Sbjct: 222 DSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSS 281
Query: 272 DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSAN 331
D I +W + +R + H V + +S++ + S + D + VW + ++
Sbjct: 282 DSTIIIW--DWQNRRP--LKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSP 335
Query: 332 HMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
LRGH ++ + + GL+++ S+DRT+R W + G C+ ++ H + +
Sbjct: 336 AEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDI-TTGH--CIRIIHAHQRGI 392
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
A + NG V SGS D IR ++ S
Sbjct: 393 ----ACAQ--YNGKFIV-SGSSDLTIRIFEAS 417
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 178 (67.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 62/219 (28%), Positives = 103/219 (47%)
Query: 224 LIYSVSWDKSLKIWRAS-DLRCLESI--KAHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D+ ++IW D +S+ + H+ V VA S G + + S D +W
Sbjct: 30 LLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K N+ + TLE H++ V ++A + G +L + + D+S+ VW+ ++ + V+ L
Sbjct: 90 K--NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS-VL 146
Query: 340 RGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
H + + ++ LL S S D TV+++Q D + C A LEGH V S+ A
Sbjct: 147 SSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVCCATLEGHESTVWSI-AFDP 204
Query: 398 EGQNGVVSVFSGSLDGEIRAW-------QVSVSCPNSSP 429
GQ + S S D +R W + V+C S P
Sbjct: 205 SGQR----LASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ + D C+ +++ HE+ V +VA +G + T S D+ + VW
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ L H V + +L S + D ++ ++ E + V L GH
Sbjct: 137 EDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE--GDDWVCCATLEGHE 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIWQR------------GSDGRFGCLAVLEG-HTKP 388
+ + + +G L S S DRTVRIW++ GSD + C+ L G HT+
Sbjct: 195 STVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRT 254
Query: 389 V 389
+
Sbjct: 255 I 255
Score = 140 (54.3 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 241 DLRCLES-IKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHK 297
D L+S + AH D+ +A + GT+ DRKIR+W + + + E H+
Sbjct: 3 DSLVLQSRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLS-EGHQ 61
Query: 298 SAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGL 355
V +A S G L S + D + +W + V T L GH + + L
Sbjct: 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNL 119
Query: 356 LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
L + S D++V +W+ + + C++VL HT+ VK + V Q + S S D +
Sbjct: 120 LATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHV--VWHPSQELLASA---SYDDTV 174
Query: 416 RAWQ 419
+ +Q
Sbjct: 175 KLYQ 178
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 48/164 (29%), Positives = 80/164 (48%)
Query: 205 KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
+ + + H +V LAV+ ++ S S+D + ++W S+ R L ++ H + A+A G
Sbjct: 366 RSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD-GR 424
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
+ TGS D +R+W P + HA+ L+ H S V L +S D L +G D S+ VW
Sbjct: 425 RIATGSLDTSVRIW-DPNTGQCHAI---LQGHTSLVGQLQMSGD--TLVTGGSDGSVRVW 478
Query: 325 DREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
S M L H ++ L ++SG +D V++W
Sbjct: 479 ----SLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVW 518
Score = 172 (65.6 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 53/192 (27%), Positives = 89/192 (46%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKP 281
+ ++ S D+ +++W + + ++ H V + +S T +GS D +R+W
Sbjct: 302 DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLR 361
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
R L+ H+++V LA+ D ++ SG+ D + VW + AL G
Sbjct: 362 TGTCRSVLVG----HQASVRCLAVHGD--IVVSGSYDTTARVWSISEGR----FLRALSG 411
Query: 342 HGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL-----TAVT 396
H I + + +GS D +VRIW + G+ C A+L+GHT V L T VT
Sbjct: 412 HFSQIYAIAFDGRRIATGSLDTSVRIWDPNT-GQ--CHAILQGHTSLVGQLQMSGDTLVT 468
Query: 397 EEGQNGVVSVFS 408
G +G V V+S
Sbjct: 469 G-GSDGSVRVWS 479
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI 350
+ L H+++V LA+ D ++ SG+ D + VW + AL GH I +
Sbjct: 367 SVLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISEGR----FLRALSGHFSQIYAIA 420
Query: 351 NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGS 410
+ +GS D +VRIW + G+ C A+L+GHT V L +G V GS
Sbjct: 421 FDGRRIATGSLDTSVRIWDPNT-GQ--CHAILQGHTSLVGQLQ------MSGDTLVTGGS 471
Query: 411 LDGEIRAWQVSVSCP 425
DG +R W ++ P
Sbjct: 472 -DGSVRVWSLTRMAP 485
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 178 (67.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 168 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 223 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 278
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 279 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 315
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +I+ ++ +AV+ T + +G D I+VW
Sbjct: 166 LVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 220
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 221 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 278
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S R L L GH + +
Sbjct: 279 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR-RI--LYKLPGHAGSINEVAF 335
Query: 395 VTEE 398
+E
Sbjct: 336 HPDE 339
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 107
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 163
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 164 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 214
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 215 NDIKVWDL 222
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 136
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 137 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 189
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 190 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 243
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 244 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 178 (67.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 169 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 224 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 316
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +I+ ++ +AV+ T + +G D I+VW
Sbjct: 167 LVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 221
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 222 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S R L L GH + +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR-RI--LYKLPGHAGSINEVAF 336
Query: 395 VTEE 398
+E
Sbjct: 337 HPDE 340
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 108
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 164
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 165 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 215
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 216 NDIKVWDL 223
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 137
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 138 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 190
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 191 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 244
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 245 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 178 (67.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 169 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 224 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQ 279
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 316
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +I+ ++ +AV+ T + +G D I+VW
Sbjct: 167 LVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 221
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 222 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQ 279
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S R L L GH + +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR-RI--LYKLPGHAGSINEVAF 336
Query: 395 VTEE 398
+E
Sbjct: 337 HPDE 340
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 108
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 164
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 165 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 215
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 216 NDIKVWDL 223
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 137
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 138 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 190
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 191 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 244
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 245 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV 282
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 178 (67.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 169 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 224 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 316
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +I+ ++ +AV+ T + +G D I+VW
Sbjct: 167 LVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 221
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 222 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S R L L GH + +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR-RI--LYKLPGHAGSINEVAF 336
Query: 395 VTEE 398
+E
Sbjct: 337 HPDE 340
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 108
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 164
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 165 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 215
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 216 NDIKVWDL 223
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 137
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 138 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 190
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 191 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 244
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 245 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 178 (67.7 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 56/183 (30%), Positives = 92/183 (50%)
Query: 243 RCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
+ + +I+ H +++AV S G + T SAD+ +++W N + TL HK VN
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIW----NMSDLSCERTLTGHKLGVN 125
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INV-AGLLMSG 359
A S D + + + D+++ ++ E M T L+GH + C N + L++SG
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIY--EVPTVKMAKT--LKGHTNYVFCCNFNPQSSLVVSG 181
Query: 360 SADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
S D +VRIW D R G C+ L H+ PV +AV+ +++ SGS DG +R W
Sbjct: 182 SFDESVRIW----DVRTGMCVKTLPAHSDPV---SAVSFNRDGSLIT--SGSYDGLVRIW 232
Query: 419 QVS 421
+
Sbjct: 233 DTA 235
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/193 (27%), Positives = 91/193 (47%)
Query: 229 SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRH 287
S DK++KIW SDL C ++ H+ VN A SA ++ T S D+ ++++ P +
Sbjct: 98 SADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVK--- 154
Query: 288 ALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAIL 347
+ TL+ H + V + +++ SG+ D S+ +WD M V L H +
Sbjct: 155 -MAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG---MCVK-TLPAHSDPVS 209
Query: 348 CL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVS 405
+ N G L+ SGS D VRIW ++G+ C+ L P + + G+
Sbjct: 210 AVSFNRDGSLITSGSYDGLVRIWDT-ANGQ--CVKTLVDDENPPVAFVKFSPNGKY---- 262
Query: 406 VFSGSLDGEIRAW 418
+ S +LD ++ W
Sbjct: 263 ILSSNLDNTLKLW 275
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 53/203 (26%), Positives = 93/203 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT-GSADRKIRVWAK 280
+ L+ S S+D+S++IW C++++ AH D V+AV+ + G++ T GS D +R+W
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ L+ + V + S +G + S D ++ +WD G
Sbjct: 235 ANGQCVKTLV---DDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH-E 290
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ I +V G ++SGS D + +W + + LEGHT+ V + +
Sbjct: 291 NNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKE---VVQSLEGHTQAV--IASDCHP 345
Query: 399 GQNGVVSVFSGSL--DGEIRAWQ 419
QN + S G+L D IR W+
Sbjct: 346 MQNMIAS---GALEPDNTIRIWR 365
Score = 152 (58.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
I + S DK+LKI+ ++ +++K H + V + + V +GS D +R+W +
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW----D 191
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
+ + TL H V+A++ + DG+++ SG+ D + +WD +AN V +
Sbjct: 192 VRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD---TANGQCVKTLVDDEN 248
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ + + G ++S + D T+++W G G+ L +GH + A
Sbjct: 249 PPVAFVKFSPNGKYILSSNLDNTLKLWDFGK-GK--TLKQYQGHENNKYCIFA--NFSVT 303
Query: 402 GVVSVFSGSLDGEIRAWQV 420
G + SGS D +I W +
Sbjct: 304 GGKWIISGSEDCKIYVWNL 322
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDA-VNAVAVSAGGT-V 266
H D V+ ++ N LI S S+D ++IW ++ +C++++ E+ V V S G +
Sbjct: 204 HSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYI 263
Query: 267 YTGSADRKIRVWAKPFNE-KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ + D +++W F + K E +K + A G + SG+ D I VW+
Sbjct: 264 LSSNLDNTLKLW--DFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 326 REDSANHMVVTGALRGHGKAILC--LINVAGLLMSGSA--DRTVRIWQRGS 372
+ V +L GH +A++ + ++ SG+ D T+RIW+ S
Sbjct: 322 LQTKE----VVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSDS 368
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 176 (67.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 56/221 (25%), Positives = 101/221 (45%)
Query: 205 KKLWIEHGDAVTGLA--VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
KK H ++ +A ++ + S S DK+LK+W +CL+++K H D V +
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 263 -GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
+ +GS D +++W K + TL H ++A+ + +G+++ SG+ D
Sbjct: 134 PSNLIVSGSFDESVKIW----EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLC 189
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLA 380
+WD ++ + T A G+ + G +++ + D T+++W S GR CL
Sbjct: 190 RIWDA--ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDY-SRGR--CLK 244
Query: 381 VLEGHTKPVKSLTA-VTEEGQNGVVSVFSGSLDGEIRAWQV 420
GH L A + G+ VVS GS D + W +
Sbjct: 245 TYTGHKNEKYCLFASFSVTGRKWVVS---GSEDNMVYIWNL 282
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 59/216 (27%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H D V N + LI S S+D+S+KIW +CL+++ AH D ++AV + G+ +
Sbjct: 122 HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIV 181
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D R+W + L ++ V+ + S +G + + D ++ +WD
Sbjct: 182 SGSYDGLCRIWDAASGQ---CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDY- 237
Query: 328 DSANHMVVTGALRGHGKAILCLI---NVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVL 382
S + T GH CL +V G ++SGS D V IW + + L
Sbjct: 238 -SRGRCLKT--YTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKE---IVQRL 291
Query: 383 EGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+GHT V ++A +N + S + D I+ W
Sbjct: 292 QGHTDVV--ISAACHPTKNIIASAALEN-DKTIKVW 324
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 55/216 (25%), Positives = 96/216 (44%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H A++ + + NG + S + D + IW A D C +++ H ++ VA S+ + +
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+ S D+ ++VW + + + TL+ H V + ++ SG+ D S+ +W E
Sbjct: 98 SASDDKTLKVW----DMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW--E 151
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H I + N G L++SGS D RIW S G+ CL L
Sbjct: 152 VKTGKCLKT--LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS-GQ--CLRTLADE 206
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 207 GNPPVSFVKFSPNGKY----ILTATLDNTLKLWDYS 238
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/175 (29%), Positives = 80/175 (45%)
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
SA R+ KP +AL TL H +A++++ S +G L S A D I++W D
Sbjct: 16 SAPRREEEPQKP----NYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDG 71
Query: 330 ANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
N L GH I + + + L+S S D+T+++W S G+ CL L+GH+
Sbjct: 72 -N---CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRS-GK--CLKTLKGHSD 124
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-C-----PNSSPLNLQKWN 436
V N +VS GS D ++ W+V C +S P++ +N
Sbjct: 125 FV--FCCDFNPPSNLIVS---GSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN 174
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 177 (67.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 55/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A + T + + V A+ +D + SG D I VWD
Sbjct: 169 CTGSDDGTVKLW----DIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 224 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 316
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/184 (26%), Positives = 86/184 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +++ ++ +AV+ T + +G D I+VW
Sbjct: 167 LVCTGSDDGTVKLW---DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 221
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 222 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S L L GH + +
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRR---VLYKLPGHAGSINEVAF 336
Query: 395 VTEE 398
+E
Sbjct: 337 HPDE 340
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 108
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 164
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 165 PQLVCTGSDDGTVKLW----DIRKKAAVQTFQNTYQVLAVTFNDTSDQ-----IISGGID 215
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 216 NDIKVWDL 223
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 50/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 137
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A V T
Sbjct: 138 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AVQT- 190
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 191 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 244
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 245 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 177 (67.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 56/215 (26%), Positives = 97/215 (45%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 169 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 224 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
G+ + +G + +GS D + W
Sbjct: 280 GNVHNFEKNLLRCSWSPDGS-KIAAGSADSFLYPW 313
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/188 (27%), Positives = 84/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W+ + + + ATL+
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSV-YGDCDN--YATLKG 108
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 164
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 165 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 215
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 216 NDIKVWDL 223
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 78 NGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 137
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 138 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 190
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 191 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 244
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 245 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A I T + + V A+ +D + SG D I VWD
Sbjct: 168 CTGSDDGTVKLW----DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVR+W R + C+ + +
Sbjct: 223 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 278
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + +GS D + W +
Sbjct: 279 GNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTT 315
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +I+ ++ +AV+ T + +G D I+VW
Sbjct: 166 LVCTGSDDGTVKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 220
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ VWD A +
Sbjct: 221 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 278
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + +GSADR V +W S R L L GH + +
Sbjct: 279 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR-RI--LYKLPGHAGSINEVAF 335
Query: 395 VTEE 398
+E
Sbjct: 336 HPDE 339
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW-NVYGDCDN--YATLKG 107
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 163
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 164 PQLVCTGSDDGTVKLW----DIRKKAAIQTFQNTYQVLAVTFNDTSDQ-----IISGGID 214
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 215 NDIKVWDL 222
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 136
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTG 337
E+ + L+ H S VN+ + G L +G+ D ++ +WD A + T
Sbjct: 137 DSETGER----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AIQT- 189
Query: 338 ALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W D R L + GH V L+ +
Sbjct: 190 -FQNTYQVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-L 243
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ EG + S ++D +R W V P + + + N+
Sbjct: 244 SSEGSY----LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 177 (67.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 56/218 (25%), Positives = 97/218 (44%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N +++S S DK++ +W + ++ +K H VN+ + G V
Sbjct: 135 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 194
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A + T + + V A+ +D + SG D I VWD
Sbjct: 195 CTGSDDGTVKLW----DIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 249
Query: 327 EDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N + T +RGH ++ L L + L+S + D TVRIW R + C+ + +
Sbjct: 250 RQ--NKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQ 305
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ + +G + GS D + W +
Sbjct: 306 GNVHNFEKNLLRCSWSPDGS-KIAGGSADRFVYVWDTT 342
Score = 152 (58.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 52/184 (28%), Positives = 86/184 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAK 280
L+ + S D ++K+W D+R +++ ++ +AV+ T + +G D I+VW
Sbjct: 193 LVCTGSDDGTVKLW---DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW-- 247
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVT 336
+ +++ L T+ H +V L+LS +G+ L S A D ++ +WD A +
Sbjct: 248 --DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQ 305
Query: 337 GALRGHGKAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
G + K +L C + G + GSADR V +W S R L L GH V L
Sbjct: 306 GNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSR-RI--LYKLPGHAGSVNELAF 362
Query: 395 VTEE 398
EE
Sbjct: 363 HPEE 366
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L+ + + HE V G T+ + DR I +W + + + ATL+
Sbjct: 78 RCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLW-NVYGDCDN--YATLKG 134
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 135 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER----VKRLKGHTSFVNSCYPARRG 190
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L+ +GS D TV++W D R +T V ++T Q + SG +D
Sbjct: 191 PQLVCTGSDDGTVKLW----DIRKKAAVQTFQNTYQVLAVTFNDTSDQ-----IISGGID 241
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 242 NDIKVWDL 249
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/216 (22%), Positives = 94/216 (43%)
Query: 227 SVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVWAKPFNE 284
S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW E
Sbjct: 110 SAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE 169
Query: 285 KRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWDREDSANHMVVTGALRGHG 343
+ + L+ H S VN+ + G L +G+ D ++ +WD A V T +
Sbjct: 170 R----VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA--AVQT--FQNTY 221
Query: 344 KAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAVTEEGQN 401
+ + N + ++SG D +++W D R L + GH V L+ ++ EG
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVW----DLRQNKLTYTMRGHADSVTGLS-LSSEGSY 276
Query: 402 GVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ S ++D +R W V P + + + N+
Sbjct: 277 ----LLSNAMDNTVRIWDVRPFAPKERCVKIFQGNV 308
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 179 (68.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 67/226 (29%), Positives = 105/226 (46%)
Query: 203 HKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDL-RCLESIKAHEDAVNAVAVS 261
H ++ + + G AV + + + ++R + RC S++ H +AV +VA S
Sbjct: 78 HDAEIVVSLEKTLAGQAVETEKVLDIIYQPQA-VFRVRAVTRCTSSLEGHTEAVISVAFS 136
Query: 262 AGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
G + +GS D +R W + T + H+ V ++A S DG L SG +
Sbjct: 137 PTGKYLASGSGDTTVRFWDLSTETPQF----TAKGHRHWVLSIAWSPDGKKLASGCKNSQ 192
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCL------INV-AGLLMSGSADRTVRIWQRGSD 373
I +WD + N + L GH K I CL IN L S S D ++RIW
Sbjct: 193 IFLWDPA-TGNQ--IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLM- 248
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
GR C +L GHT+ S+T V + G +G++ +S S D I+ W+
Sbjct: 249 GR--CDKILTGHTQ---SVTCV-KWGGDGLL--YSSSQDRTIKVWR 286
Score = 145 (56.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +WR A D + LE + H+ +N V S + + S D+ I++W
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLW---- 412
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +L H SAV +A S D +L SG+ D ++ VWD E + + L GH
Sbjct: 413 EGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAE--TKKLAID--LPGH 468
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + G + SG D+ +RIW+R
Sbjct: 469 ADEVFATDWSPDGQRVASGGKDKCLRIWRR 498
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 53/195 (27%), Positives = 86/195 (44%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR 286
S S D S++IW RC + + H +V V G +Y+ S DR I+VW +
Sbjct: 234 SASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVW----RSQD 289
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI 346
L TL+ H VN +ALS D VL +GA + + + +D + + L+ +
Sbjct: 290 GILCRTLQGHAHWVNTMALSTD-YVLRTGAFEPAEATINPQDMSGSLA---ELKDKAQQR 345
Query: 347 LCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ G L+SGS D T+ +W+ D + L + GH + V ++
Sbjct: 346 YDKVRGQGPERLVSGSDDFTLFLWRPAEDKK--PLERMTGHQALINQ---VLFSPDTRII 400
Query: 405 SVFSGSLDGEIRAWQ 419
+ S S D I+ W+
Sbjct: 401 A--SASFDKSIKLWE 413
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 52/217 (23%), Positives = 99/217 (45%)
Query: 206 KLWIEHGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG 264
K+ H +VT + +GL+YS S D+++K+WR+ D +++ H VN +A+S
Sbjct: 253 KILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDY 312
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV-LFSGACDRSILV 323
+ TG+ + P + +A L K K+ + G L SG+ D ++ +
Sbjct: 313 VLRTGAFE-PAEATINP--QDMSGSLAEL-KDKAQQRYDKVRGQGPERLVSGSDDFTLFL 368
Query: 324 WDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAV 381
W + + + GH I + ++ S S D+++++W+ G G++ L
Sbjct: 369 WRPAEDKKPLE---RMTGHQALINQVLFSPDTRIIASASFDKSIKLWE-GRTGKY--LTS 422
Query: 382 LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
L GH V + A + + + + SGS D ++ W
Sbjct: 423 LRGHVSAVYQI-AWSADSR----LLVSGSSDSTLKVW 454
Score = 52 (23.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 90 INSVQLGHKLPIGCIA---VHHN--FLYAASSHEINVYDRTGTTWTSINTFNDNDSSSGS 144
I V GH I C+ +H N Y AS+ + D + W ++ D +G
Sbjct: 204 IGRVLTGHSKWITCLCWEPLHINPECRYLASASK----DGSIRIWDTLMGRCDK-ILTGH 258
Query: 145 VKSVTFC-----DGKIFTAHQDCKIRVWQ 168
+SVT C DG ++++ QD I+VW+
Sbjct: 259 TQSVT-CVKWGGDGLLYSSSQDRTIKVWR 286
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/181 (28%), Positives = 87/181 (48%)
Query: 211 HGDAVTGLAVNNGL---IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY 267
H + V +A NN I + S+DK+ K+W A +C + + H + ++ + TV
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVV 192
Query: 268 -TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D ++W E+ + TL H + + +L+ G + +G+ D +++VWD
Sbjct: 193 ATGSMDTTAKLWDIQSGEE----VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Query: 327 EDSANHMVVTGALRGHGKAILCLINV--AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
S V T L GH I + L+++GS D+T +W S G+ C+A L G
Sbjct: 249 --STGRKVHT--LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS-GK--CVATLTG 301
Query: 385 H 385
H
Sbjct: 302 H 302
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAV-NAVAVSAGGTVYTGSADRKIRVWAKPF 282
LI + S DK+ +W A+ +C+ ++ H+D + ++ G + T SAD RV +
Sbjct: 275 LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARV----Y 330
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
N I LE H+ ++ ++ + G L +G+ D++ +WD + V L GH
Sbjct: 331 NATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQV----LEGH 386
Query: 343 GKAIL-CLINVAG-LLMSGSADRTVRIWQ 369
I C N G ++++GS D + RIW+
Sbjct: 387 TDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 51/183 (27%), Positives = 91/183 (49%)
Query: 215 VTGLAVNN-GLIYSV-SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGS 270
+T +A+N G + S+D++ K+W + L +++ H + V A+A + G + TGS
Sbjct: 95 LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ ++W+ + H T H + + L+ + TV+ +G+ D + +WD +
Sbjct: 155 FDKTCKLWSAETGKCYH----TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGE 210
Query: 331 NHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
VVT L GH I+ L + +G +++GS D TV +W S GR + L GH
Sbjct: 211 E--VVT--LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWD-ASTGRK--VHTLIGHCAE 263
Query: 389 VKS 391
+ S
Sbjct: 264 ISS 266
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 52/180 (28%), Positives = 86/180 (47%)
Query: 248 IKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
++AH + VA++ G+ + TGS DR +VW E+ H TLE H++ V A+A +
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELH----TLEGHRNVVYAIAFN 143
Query: 307 DD-GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMS-GSADR 363
+ G + +G+ D++ +W E + RGH I+CL N +++ GS D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHT----FRGHTAEIVCLSFNPQSTVVATGSMDT 199
Query: 364 TVRIW--QRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
T ++W Q G + + L GH + SL+ T G + +GS D + W S
Sbjct: 200 TAKLWDIQSGEE-----VVTLTGHLAEIISLSFDTS-GDR----IITGSFDHTVVVWDAS 249
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 52/215 (24%), Positives = 98/215 (45%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGTVY 267
H + L+ N + ++ + S D + K+W + ++ H + +++ ++G +
Sbjct: 176 HTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII 235
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TGS D + VW K H LI H + +++ S D +++ +G+ D++ ++WD
Sbjct: 236 TGSFDHTVVVWDASTGRKVHTLIG----HCAEISSALFSWDCSLILTGSMDKTCMLWDA- 290
Query: 328 DSANHMVVTGALRGHGKAIL--CLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
++ V T L GH IL C L+ + SAD T R++ + C+ LEGH
Sbjct: 291 -TSGKCVAT--LTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRK---CITKLEGH 344
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ ++ +G + +GS D R W V
Sbjct: 345 EGEISKIS-FNPQGNR----LLTGSSDKTARIWDV 374
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 42/163 (25%), Positives = 72/163 (44%)
Query: 268 TGSADRKIRVWAKPFNEK--RHA-----LIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
T S +++R+ + EK +H L L H + +AL+ G+ +G+ DR+
Sbjct: 56 TASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRT 115
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCLI--NVAG-LLMSGSADRTVRIWQRGSDGRFG 377
VWD S + L GH + + N G + +GS D+T ++W G+
Sbjct: 116 CKVWDTA-SGEEL---HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS-AETGK-- 168
Query: 378 CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
C GHT + L+ Q+ VV+ +GS+D + W +
Sbjct: 169 CYHTFRGHTAEIVCLSF---NPQSTVVA--TGSMDTTAKLWDI 206
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/187 (32%), Positives = 90/187 (48%)
Query: 243 RCLESIKAHEDAVNAV--AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
RC S+ H+ + + + S + TGS D R+W + IAT++ H + V
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLW----DCDTQTPIATMKGHTNWV 180
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL----INVA--- 353
+ +A + D +++ +G+ D +I WD + + + ALR H K I+ L +++A
Sbjct: 181 SCVAWAPDASIIATGSMDNTIRFWDPKKGSP---IGDALRRHTKPIMALCWQPLHLAPDS 237
Query: 354 G--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSL 411
G LL SGS D TVRIW L L GHT P+ T V GQN + +S S
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRT---LLFTLSGHTAPI---TCVRWGGQNWI---YSSSY 288
Query: 412 DGEIRAW 418
D IR W
Sbjct: 289 DKTIRIW 295
Score = 167 (63.8 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE 284
IYS S+DK+++IW A D +CL +K H VN +++S + +G+ D K F++
Sbjct: 283 IYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHT-DFKPKSFSD 341
Query: 285 KRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGK 344
+R K K A L G L S + D +++WD + S + + GH K
Sbjct: 342 ERR-------KAKERYEA-CLKQSGERLVSASDDLQLILWDPQKSTKPIT---KMHGHQK 390
Query: 345 AIL-CLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+ + G + + S D +VR+W G G+F LA L GH V
Sbjct: 391 VVNHASFSPDGRCIATASFDSSVRLWD-GKTGKF--LATLRGHVAAV 434
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 53/179 (29%), Positives = 84/179 (46%)
Query: 229 SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRH 287
S D + ++W + ++K H + V+ VA + ++ TGS D IR W P +K
Sbjct: 154 SGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFW-DP--KKGS 210
Query: 288 ALIATLEKHKSAVNALALS------DDGTVLF-SGACDRSILVWDREDSANHMVVTGALR 340
+ L +H + AL D G L SG+ D ++ +W+ + ++ T L
Sbjct: 211 PIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVK--LRTLLFT--LS 266
Query: 341 GHGKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
GH I C + G + S S D+T+RIW DG+ CL +L+GH V L+ TE
Sbjct: 267 GHTAPITC-VRWGGQNWIYSSSYDKTIRIWD-AKDGK--CLHILKGHAARVNHLSLSTE 321
Score = 129 (50.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 51/179 (28%), Positives = 76/179 (42%)
Query: 194 PNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRAS-DLRCLESIKAHE 252
P S+ RR K E +A L + + S S D L +W + + + H+
Sbjct: 336 PKSFSDERRKAK----ERYEAC--LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQ 389
Query: 253 DAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV 311
VN + S G + T S D +R+W + K +ATL H +AV A S D +
Sbjct: 390 KVVNHASFSPDGRCIATASFDSSVRLW----DGKTGKFLATLRGHVAAVYQCAWSTDSRL 445
Query: 312 LFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGL-LMSGSADRTVRIW 368
L S + D ++ VWD L GH + + + G + SG AD+ VRIW
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKF----DLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 48 (22.0 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 75 SPDETINFSSASHLCINSVQLGHKLPIGCIAVH-HNFLYAASSHEINVYDRTGTTW 129
S D T+ + + GH PI C+ N++Y++S YD+T W
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSS------YDKTIRIW 295
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 183 (69.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 60/211 (28%), Positives = 104/211 (49%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V LA + +G L+ S S+D ++ +W ++ L++ + H ++ +VA + G +
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+ S D I++W E L TL+ H +V ++A S DG +L S + D +I VW+
Sbjct: 851 SASDDSTIKIWDLATGE----LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
+ G G K++ + L SGS TV++W + G L LEGH++
Sbjct: 907 TGELQQSLEGR-SGWVKSVAFSPD-GKKLASGSEKNTVKLWNPAT-GEL--LQTLEGHSQ 961
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
V+S+ A + +G+ + S S D I+ W
Sbjct: 962 SVRSV-AFSPDGKQ----LASSSSDTTIKLW 987
Score = 177 (67.4 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 80/301 (26%), Positives = 135/301 (44%)
Query: 139 DSSSGSVKSVTFC-DGK-IFTAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNS 196
+ S SV+SV F DGK + ++ D I++W + R + F
Sbjct: 957 EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD-LWIRAVAFSPDGK 1015
Query: 197 YVTVRRHKK--KLW----------IE-HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASD 241
++ KLW +E H +V +A + + + S S D ++K+W ++
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSAT 1075
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
+++ H V +V S G + + S D I++W N L TL V
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW----NPLTGELQQTLTGRSDWV 1131
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAG-LLMS 358
+++A S DG L SG D +I +WD + ++ T L GH I ++ + G LL S
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWD--SATGELLQT--LEGHSDRIQSVVFSPDGKLLAS 1187
Query: 359 GSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE-IRA 417
GS D+T ++W + G L + EGH+K V+S+ A + +G+ + + S GE I+
Sbjct: 1188 GSYDQTAKLWDPAT-GEL--LQIFEGHSKWVESV-AFSPDGK-----LLASSSYGETIKL 1238
Query: 418 W 418
W
Sbjct: 1239 W 1239
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 58/213 (27%), Positives = 102/213 (47%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H +V +A + +G L+ S S D ++K+W + +S++ V +VA S G +
Sbjct: 875 HSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLA 934
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS +++W N L+ TLE H +V ++A S DG L S + D +I +W+
Sbjct: 935 SGSEKNTVKLW----NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-- 988
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + T +GH I + + G L+SGS D T+++W + LE H
Sbjct: 989 STTGELQQT--FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE---LQQSLEDH 1043
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
++ V ++ ++ Q + S SLD I+ W
Sbjct: 1044 SRSVHAVAFSPDDKQ-----LASSSLDSTIKLW 1071
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 58/200 (29%), Positives = 97/200 (48%)
Query: 226 YSVS-WDKSLKI---WRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAK 280
Y++S W + K+ W A ++++ H V +V S G + +GS D +++W
Sbjct: 724 YNLSGWSQLPKVEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDP 779
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
E L+ TL+ H V +LA S DG +L SG+ D +I +WD + ++ T
Sbjct: 780 ATGE----LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD--SATGELLQT--FE 831
Query: 341 GHGKAILCLINVA-GL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
GH +I + G L S S D T++IW + G L+ H++ V+S+ A + +
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT-GELQ--QTLDSHSQSVRSV-AFSPD 887
Query: 399 GQNGVVSVFSGSLDGEIRAW 418
G+ + S SLD I+ W
Sbjct: 888 GK----LLASSSLDSTIKVW 903
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/197 (27%), Positives = 96/197 (48%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
+ S S+D ++KIW + L+++ H V ++A S G + +GS D I +W
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E L+ T E H ++ ++A + DG L S + D +I +WD + + T L H
Sbjct: 825 E----LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL--ATGELQQT--LDSHS 876
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+++ + + G LL S S D T+++W + G LEG + VKS+ A + +G+
Sbjct: 877 QSVRSVAFSPDGKLLASSSLDSTIKVWNPAT-GELQ--QSLEGRSGWVKSV-AFSPDGKK 932
Query: 402 GVVSVFSGSLDGEIRAW 418
+ SGS ++ W
Sbjct: 933 ----LASGSEKNTVKLW 945
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/200 (27%), Positives = 99/200 (49%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEK 285
S S D ++KIW + +++ +H +V +VA S G + S+ D I+VW N
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW----NPA 906
Query: 286 RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
L +LE V ++A S DG L SG+ ++ +W+ + ++ T L GH ++
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN--PATGELLQT--LEGHSQS 962
Query: 346 ILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGV 403
+ + + G L S S+D T+++W + G +GH ++++ A + +G++ V
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWN-STTGELQ--QTFKGHDLWIRAV-AFSPDGKHLV 1018
Query: 404 VSVFSGSLDGEIRAWQVSVS 423
SGS D I+ W ++ S
Sbjct: 1019 ----SGSDDNTIKLWDLATS 1034
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/289 (22%), Positives = 119/289 (41%)
Query: 57 QSNLSLQTLPSVPSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASS 116
QS S+ P L S D TI +++ + GH L I +A + + S
Sbjct: 961 QSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSG 1020
Query: 117 HEINVYDRTGTTWT-SINTFNDN-DSSSGSVKSVTFC--DGKIFTAHQDCKIRVWQXXXX 172
+ D T W + + + + S SV +V F D ++ ++ D I++W
Sbjct: 1021 SD----DNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG 1076
Query: 173 XXXXXXXXXXXVNDRLLRF------MLPNSYV-TVRRHK------KKLWIEHGDAVTGLA 219
R + F + NSY T++ ++ D V +A
Sbjct: 1077 ELQRTLEGHSQ-GVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVA 1135
Query: 220 VN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIR 276
+ +G + S +D ++K+W ++ L++++ H D + +V S G + +GS D+ +
Sbjct: 1136 FSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAK 1195
Query: 277 VWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+W E L+ E H V ++A S DG +L S + +I +WD
Sbjct: 1196 LWDPATGE----LLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 172 (65.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 211 HGDAVTGLA--VNNGLIYSVSWDKSLKIW-------RASDLRCLESIKAHEDAVNAVAVS 261
H A+ +A + L+ + S+D ++ IW R ++ L I+ HE+ V VA S
Sbjct: 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS 116
Query: 262 AGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
G + T S D+ + +W + + + I+ L++H V + +L S + D +
Sbjct: 117 NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDT 176
Query: 321 ILVW-DREDSANHMVVTGALRGHGKAILC--LINVAGL--LMSGSADRTVRIWQ-RGSDG 374
+ +W D +D + V L GH + G+ L SGS D TVR+W+ G D
Sbjct: 177 VRIWKDYDDDWECVAV---LNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233
Query: 375 ----RFGCLAVL-EGHTKPVKSLT-----AVTEEGQNGVVSVFSGSLDGEIRAWQVSVSC 424
+ C A+L + H + V ++ + G +GV++V+ +DGE + + C
Sbjct: 234 DDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYE-EVDGEWKVFAKRALC 292
Query: 425 PNSSPLNLQKW 435
+N+ KW
Sbjct: 293 HGVYEINVVKW 303
Score = 169 (64.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 48/188 (25%), Positives = 98/188 (52%)
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEK--HK 297
+ + ++S+K +++ + + S G + TGS DRKI++ + +++ LI L++ HK
Sbjct: 2 ASINLIKSLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDD--FTLIDVLDETAHK 58
Query: 298 SAVNALALSDDGTVLFSGACDRSILVWDREDSANH---MVVTGALRGHGKAI--LCLINV 352
A+ ++A ++L +G+ D ++ +W +E+SA+ M + + GH + + N
Sbjct: 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND 118
Query: 353 AGLLMSGSADRTVRIWQRGSDGR-FGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSL 411
L + S D++V IW+ G + C++VL+ H++ VK + E + S S
Sbjct: 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL-----LASSSY 173
Query: 412 DGEIRAWQ 419
D +R W+
Sbjct: 174 DDTVRIWK 181
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWA 279
N I S S D++ ++W +C+ ++ E+ V A+A+S + GS D+ IRVW+
Sbjct: 413 NGRFIVSGSGDRTARLWDVETGQCILKLEI-ENGVTAIAISPNDQFIAVGSLDQIIRVWS 471
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
L+ LE HK +V ++A S D ++L SG+ D++I VW+ + A V A+
Sbjct: 472 VS-----GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQ--ATRSVGLSAI 524
Query: 340 RGHG--KAILC-----LINVA-------GLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ G KA +++VA GL SGS DR+++ W + + +GH
Sbjct: 525 KPEGICKATYTGHTDFVLSVAVSPDSRWGL--SGSKDRSMQFWDLQTGQSY---LTCQGH 579
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
V S+ + +G+ SGS D R W + + P
Sbjct: 580 KNSVISV-CFSPDGRQFA----SGSGDLRARIWSIDPASP 614
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 54/202 (26%), Positives = 97/202 (48%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ +K+W S + HE + ++ S G + +GS DR R+W + +
Sbjct: 381 DRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW----DVETGQC 436
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--L 347
I LE ++ V A+A+S + + G+ D+ I VW S + +V L GH +++ +
Sbjct: 437 ILKLEI-ENGVTAIAISPNDQFIAVGSLDQIIRVW----SVSGTLVE-RLEGHKESVYSI 490
Query: 348 CLINVAGLLMSGSADRTVRIWQRGSDGRFG---------CLAVLEGHTKPVKSLTAVTEE 398
+ +L+SGS D+T+++W+ + G C A GHT V S+ AV+ +
Sbjct: 491 AFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSV-AVSPD 549
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
+ G+ SGS D ++ W +
Sbjct: 550 SRWGL----SGSKDRSMQFWDL 567
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
KL IE+G ++ N+ I S D+ +++W S +E ++ H+++V ++A S +
Sbjct: 439 KLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-LVERLEGHKESVYSIAFSPDSS 497
Query: 266 VY-TGSADRKIRVWAKPFNE-------KRHALI-ATLEKHKSAVNALALSDDGTVLFSGA 316
+ +GS D+ I+VW K + AT H V ++A+S D SG+
Sbjct: 498 ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGS 557
Query: 317 CDRSILVWDREDSANHMVVTGALRGHGKAIL--CLINVAGLLMSGSADRTVRIW 368
DRS+ WD + +++ +GH +++ C SGS D RIW
Sbjct: 558 KDRSMQFWDLQTGQSYLTC----QGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +A S G + TG+ DR+I++W + R+ H+ + +L S +G +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSG----HEQDIYSLDFSHNGRFIV 418
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSD 373
SG+ DR+ +WD E ++ + AI N + + GS D+ +R+W
Sbjct: 419 SGSGDRTARLWDVE--TGQCILKLEIENGVTAIAISPNDQFIAV-GSLDQIIRVWSVS-- 473
Query: 374 GRFGCLAV-LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
G L LEGH + V S+ A + + + SGSLD I+ W++ +
Sbjct: 474 ---GTLVERLEGHKESVYSI-AFSPDSS----ILLSGSLDKTIKVWELQAT 516
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 175 (66.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 55/178 (30%), Positives = 92/178 (51%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV-AVSAGGTVY 267
H DAV+GLA G +YS S D+S+K+W ++ +E++ H+DAV A+ A+S V
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
G D +RVW P + L+ H+ +++++ L ++ ++ SGA D S+ +W
Sbjct: 300 AGGRDGTVRVWKIP---EESQLV--FYGHQGSIDSIQLINEEHMV-SGADDGSVALWGLS 353
Query: 328 DSANHMVVTGA--LRGH-G-------KAILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ A LRG G ++ L+N L+ +GS + +VR+WQ G R
Sbjct: 354 KKRPLALQREAHGLRGEPGLEQPFWVSSVAALLNT-DLVATGSHNNSVRLWQCGEGFR 410
Score = 144 (55.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 51/162 (31%), Positives = 83/162 (51%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKS--LKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVY 267
H V +A+++ Y S D+S + IW A + L + H DAV+ +A G +Y
Sbjct: 198 HSTHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLY 257
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL-ALSDDGTVLFSGACDRSILVWDR 326
+ S DR ++VW N ++ + TL H+ AV AL ALS + V +G D ++ VW
Sbjct: 258 STSHDRSVKVW----NVAENSYVETLFGHQDAVAALDALSRECCVT-AGGRDGTVRVWKI 312
Query: 327 EDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
+ + +V G +G +I LIN ++ SG+ D +V +W
Sbjct: 313 PEESQ-LVFYGH-QGSIDSIQ-LINEEHMV-SGADDGSVALW 350
Score = 144 (55.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 55/188 (29%), Positives = 85/188 (45%)
Query: 251 HEDAVNAVAVSAGGTVYTGSADRK--IRVWAKPFNEKRHALIATLEKHKSAVNALALSDD 308
H V +A+S+ G Y S DR I +W +H + T H+ AV+ LA
Sbjct: 198 HSTHVLCMAISSDGK-YLASGDRSKLILIWEA--QSCQH--LYTFTGHRDAVSGLAFRRG 252
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVR 366
L+S + DRS+ VW+ + N V T L GH A+ L ++ + +G D TVR
Sbjct: 253 THQLYSTSHDRSVKVWNVAE--NSYVET--LFGHQDAVAALDALSRECCVTAGGRDGTVR 308
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPN 426
+W+ + + V GH + S+ + EE + SG+ DG + W +S
Sbjct: 309 VWKIPEESQL----VFYGHQGSIDSIQLINEE------HMVSGADDGSVALWGLS----K 354
Query: 427 SSPLNLQK 434
PL LQ+
Sbjct: 355 KRPLALQR 362
Score = 143 (55.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 57/220 (25%), Positives = 96/220 (43%)
Query: 213 DAVTGLAVNNGLIYSVSWDKSL-KIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGS 270
D V G + L KS+ K +A D + ++ H+ ++ + V+ +++ +
Sbjct: 106 DQVAGRLKEDVLEQRGRLQKSVAKEIQAPDPADIRILRGHQLSITCLVVTPDDLAIFSAA 165
Query: 271 ADRKIRVWAKPFNEKRHALIATLEK--------HKSAVNALALSDDGTVLFSGACDRSIL 322
D I W+ K H +I +K H + V +A+S DG L SG + IL
Sbjct: 166 KDCTIIKWSVESGRKLH-VIPRAKKGTEGQPPGHSTHVLCMAISSDGKYLASGDRSKLIL 224
Query: 323 VWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLA 380
+W+ + S H+ GH A+ L G L S S DR+V++W + +
Sbjct: 225 IWEAQ-SCQHLYT---FTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSY---VE 277
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
L GH V +L A++ E V +G DG +R W++
Sbjct: 278 TLFGHQDAVAALDALSRE-----CCVTAGGRDGTVRVWKI 312
Score = 41 (19.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 148 VTFCDGKIFTAHQDCKIRVW 167
VT D IF+A +DC I W
Sbjct: 154 VTPDDLAIFSAAKDCTIIKW 173
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 176 (67.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 55/178 (30%), Positives = 92/178 (51%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV-AVSAGGTVY 267
H DAV+GLA G +YS S D+S+K+W ++ +E++ H+DAV A+ A+S V
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 302
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
G D +RVW P + L+ H+ +++++ L ++ ++ SGA D S+ +W
Sbjct: 303 AGGRDGTVRVWKIP---EESQLV--FYGHQGSIDSIQLINEEHMV-SGADDGSVALWGLS 356
Query: 328 DSANHMVVTGA--LRGH-G-------KAILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ A LRG G ++ L+N L+ +GS + +VR+WQ G R
Sbjct: 357 KKRPLALQREAHGLRGEQGLEQPFWVSSVAALLNT-DLIATGSHNNSVRLWQCGEGFR 413
Score = 148 (57.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 51/162 (31%), Positives = 83/162 (51%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKS--LKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVY 267
H + +A+++ Y S D+S + IW A R L + H DAV+ +A G +Y
Sbjct: 201 HSSHILCMAISSDGKYLASGDRSKLILIWEAQSCRHLYTFTGHRDAVSGLAFRRGTHQLY 260
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL-ALSDDGTVLFSGACDRSILVWDR 326
+ S DR ++VW N ++ + TL H+ AV AL ALS + V +G D ++ VW
Sbjct: 261 STSHDRSVKVW----NVAENSYVETLFGHQDAVAALDALSRECCVT-AGGRDGTVRVWKI 315
Query: 327 EDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
+ + +V G +G +I LIN ++ SG+ D +V +W
Sbjct: 316 PEESQ-LVFYGH-QGSIDSIQ-LINEEHMV-SGADDGSVALW 353
Score = 148 (57.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 55/188 (29%), Positives = 85/188 (45%)
Query: 251 HEDAVNAVAVSAGGTVYTGSADRK--IRVWAKPFNEKRHALIATLEKHKSAVNALALSDD 308
H + +A+S+ G Y S DR I +W RH + T H+ AV+ LA
Sbjct: 201 HSSHILCMAISSDGK-YLASGDRSKLILIWEA--QSCRH--LYTFTGHRDAVSGLAFRRG 255
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVR 366
L+S + DRS+ VW+ + N V T L GH A+ L ++ + +G D TVR
Sbjct: 256 THQLYSTSHDRSVKVWNVAE--NSYVET--LFGHQDAVAALDALSRECCVTAGGRDGTVR 311
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPN 426
+W+ + + V GH + S+ + EE + SG+ DG + W +S
Sbjct: 312 VWKIPEESQL----VFYGHQGSIDSIQLINEE------HMVSGADDGSVALWGLS----K 357
Query: 427 SSPLNLQK 434
PL LQ+
Sbjct: 358 KRPLALQR 365
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALI 290
K ++ +D+R L + H+ ++ + ++ +++ + D I W+ K H +I
Sbjct: 132 KEIQAPAPADIRIL---RGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRKLH-VI 187
Query: 291 ATLEK--------HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+K H S + +A+S DG L SG + IL+W+ + S H+ GH
Sbjct: 188 PRAKKGAEGQPPGHSSHILCMAISSDGKYLASGDRSKLILIWEAQ-SCRHLYT---FTGH 243
Query: 343 GKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
A+ L G L S S DR+V++W + + L GH V +L A++ E
Sbjct: 244 RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSY---VETLFGHQDAVAALDALSRE-- 298
Query: 401 NGVVSVFSGSLDGEIRAWQV 420
V +G DG +R W++
Sbjct: 299 ---CCVTAGGRDGTVRVWKI 315
Score = 40 (19.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 148 VTFCDGKIFTAHQDCKIRVW 167
+T D IF+A +DC I W
Sbjct: 157 ITPDDLAIFSAAKDCTIIKW 176
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/190 (25%), Positives = 91/190 (47%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H + V L + ++ + S+D ++KIW L +++ HE + + + +GS
Sbjct: 348 HTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLI-SGS 406
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
DR I+VW N + I+T H+ V + L D ++L SG+ D+++ +W+ ED +
Sbjct: 407 MDRTIKVW----NWRTGECISTYTGHRGGV--IGLHFDASILASGSVDKTVKIWNFEDKS 460
Query: 331 NHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
T +LRGH + + ++ + + S S D TVR+W + C+ GH
Sbjct: 461 -----TFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKT---CIRTFHGHVGQ 512
Query: 389 VKSLTAVTEE 398
V+ + + E
Sbjct: 513 VQQVVPLPRE 522
Score = 138 (53.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ TL H+S + L D T L SG+ DR+I VW+ + T GH ++ L
Sbjct: 382 LRTLRGHESGIRCLQFDD--TKLISGSMDRTIKVWNWR--TGECIST--YTGHRGGVIGL 435
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
A +L SGS D+TV+IW F L GHT V ++ T +VFS
Sbjct: 436 HFDASILASGSVDKTVKIWNFEDKSTFS----LRGHTDWVNAVRVDTSSR-----TVFSA 486
Query: 410 SLDGEIRAWQVSV-SC 424
S D +R W + +C
Sbjct: 487 SDDCTVRLWDLDTKTC 502
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
I T + H + V L D+ +L +G+ D +I +WD E LRGH I CL
Sbjct: 342 IKTFKGHTNGVMCLQFEDN--ILATGSYDTTIKIWDTETGEE----LRTLRGHESGIRCL 395
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
L+SGS DRT+++W + R G C++ GH V L +++ S
Sbjct: 396 QFDDTKLISGSMDRTIKVW----NWRTGECISTYTGHRGGVIGL-----HFDASILA--S 444
Query: 409 GSLDGEIRAW 418
GS+D ++ W
Sbjct: 445 GSVDKTVKIW 454
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 171 (65.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 224 LIYSVSWDKSLKIW-RASDLRCLESI--KAHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D++++IW + D +S+ + H+ V V+ S G + + S D +W
Sbjct: 30 LLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASFDATTCIWM 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K ++ I TLE H++ V ++A + G++L + + D+S+ VW+ ++ + V+ L
Sbjct: 90 K--KKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVS-VL 146
Query: 340 RGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
H + + ++ LL S S D +V++++ D + C A LEGHT V SL A +
Sbjct: 147 NSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDD-WVCCATLEGHTSTVWSL-AFDQ 204
Query: 398 EGQNGVVSVFSGSLDGEIRAWQ 419
G+ + + S D +R W+
Sbjct: 205 TGEQ----LATCSDDKTVRIWR 222
Score = 161 (61.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 59/218 (27%), Positives = 99/218 (45%)
Query: 227 SVSWDKSLKIW--RASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
S S+D + IW + + C+ +++ HE+ V +VA + G++ T S D+ + VW
Sbjct: 78 SASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E+ + ++ L H V + + +L S + D S+ ++ E+ + V L GH
Sbjct: 137 EEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEE--DDWVCCATLEGHT 194
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIW-QRG-------SDGRFGCLAVLEG-HTKPVKSL 392
+ L + G L + S D+TVRIW Q G SD + C+ L G HT+ V
Sbjct: 195 STVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYD- 253
Query: 393 TAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPL 430
V G ++ G D +R ++ P S PL
Sbjct: 254 --VNWNHLTGAIATACG--DDAVRIFEED---PGSDPL 284
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 242 LRCLESIKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPF-NEKRHALIATLEKHKS 298
L L + AH D+ +A + GT+ DR IR+W K N +++ E H+
Sbjct: 5 LTLLSRVSAHPDSRCWFLAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLG--EGHQR 62
Query: 299 AVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLL 356
V ++ S G L S + D + +W ++ + T L GH + + LL
Sbjct: 63 TVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITT--LEGHENEVKSVAWAPSGSLL 120
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ S D++V +W+ + + C++VL HT+ VK
Sbjct: 121 ATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVK 154
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 173 (66.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 42/149 (28%), Positives = 76/149 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAV-NAVAVSAGGTVYTGSADRKIRVWAKPF 282
LI + S DK+ K+W A + +C+ ++ H+D + ++ G + T SAD R+++
Sbjct: 275 LILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
E + LE H+ ++ ++ + G L +G+ D++ +WD + V L GH
Sbjct: 335 RE----CVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQV----LEGH 386
Query: 343 GKAIL-CLINVAG-LLMSGSADRTVRIWQ 369
I C N G ++++GS D T RIW+
Sbjct: 387 TDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 171 (65.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 49/181 (27%), Positives = 88/181 (48%)
Query: 211 HGDAVTGLAVNNGL---IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-V 266
H + V +A NN I + S+DK+ K+W +C + + H + ++ + T V
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV 192
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D ++W E+ + TL H + + +L+ + G + +G+ D ++ VW+
Sbjct: 193 ATGSMDTTAKLWDIQSGEE----VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Query: 327 EDSANHMVVTGALRGHGKAILCLI-NV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+ V T L GH I + N L+++GS D+T ++W +G+ C+A L G
Sbjct: 249 D--TGRKVYT--LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD-AVNGK--CVATLTG 301
Query: 385 H 385
H
Sbjct: 302 H 302
Score = 171 (65.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 59/218 (27%), Positives = 107/218 (49%)
Query: 215 VTGLAVN-NGLIYSV-SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGS 270
+T +A+N +G + S+D++ K+W + L +++ H + V A+A + G + TGS
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ ++W+ + H T H + + L+ + T++ +G+ D + +WD +
Sbjct: 155 FDKTCKLWSVETGKCYH----TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE 210
Query: 331 NHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
V T L GH I+ L N +G +++GS D TV +W+ + GR + L GH
Sbjct: 211 E--VFT--LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT-GRK--VYTLIGHCAE 263
Query: 389 VKSLTAVTEEGQNGVVS-VFSGSLDGEIRAWQ-VSVSC 424
+ S AV N S + +GS+D + W V+ C
Sbjct: 264 ISS--AVF----NWDCSLILTGSMDKTCKLWDAVNGKC 295
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 169 (64.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 55/178 (30%), Positives = 89/178 (50%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV-AVSAGGTVY 267
H DAV+GLA G +YS S D+S+K+W ++ +E++ H+DAV A+ A+S V
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
G D +RVW P + L+ H+ +++ + L ++ ++ SGA D S+ +W
Sbjct: 300 AGGRDGTVRVWKIP---EESQLV--FYGHQGSIDCIHLINEEHMV-SGADDGSVALWGLS 353
Query: 328 DSANHMVVTGA--LRGH-G-------KAILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ A LRG G ++ L+N L+ +GS VR+WQ G R
Sbjct: 354 KKRPLALQREAHGLRGEPGLEQPFWISSVAALLNT-DLVATGSHSSCVRLWQCGEGFR 410
Score = 150 (57.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKS--LKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVY 267
H V +A+++ Y S D+S + IW A + L + H DAV+ +A G +Y
Sbjct: 198 HSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLY 257
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL-ALSDDGTVLFSGACDRSILVWDR 326
+ S DR ++VW N ++ + TL H+ AV AL ALS + V +G D ++ VW
Sbjct: 258 STSHDRSVKVW----NVAENSYVETLFGHQDAVAALDALSRECCVT-AGGRDGTVRVWKI 312
Query: 327 EDSANHMVVTGALRGHGKAILC--LINVAGLLMSGSADRTVRIW 368
+ + +V GH +I C LIN ++ SG+ D +V +W
Sbjct: 313 PEESQ-LV----FYGHQGSIDCIHLINEEHMV-SGADDGSVALW 350
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALI 290
K ++ ++D+R L + H+ ++ + V+ + +++ + D I W+ K H +I
Sbjct: 129 KEIQAPASADIRVL---RGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLH-VI 184
Query: 291 ATLEK--------HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+K H S V +A+S DG L SG + IL+W+ + S H+ GH
Sbjct: 185 PRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQ-SCQHLYT---FTGH 240
Query: 343 GKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
A+ L G L S S DR+V++W + + L GH V +L A++ E
Sbjct: 241 RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSY---VETLFGHQDAVAALDALSRE-- 295
Query: 401 NGVVSVFSGSLDGEIRAWQV 420
V +G DG +R W++
Sbjct: 296 ---CCVTAGGRDGTVRVWKI 312
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 41/152 (26%), Positives = 63/152 (41%)
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSAN-HMV--- 334
AK A I L H+ ++ L ++ D + +FS A D SI+ W E H++
Sbjct: 128 AKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRA 187
Query: 335 ---VTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
G GH +LC+ I+ G L SG + + IW+ S L GH V
Sbjct: 188 KKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQH---LYTFTGHRDAV 244
Query: 390 KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
L + G ++S S D ++ W V+
Sbjct: 245 SGLAF-----RRGTHQLYSTSHDRSVKVWNVA 271
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 148 VTFCDGKIFTAHQDCKIRVW 167
VT D IF+A +DC I W
Sbjct: 154 VTPDDSAIFSAAKDCSIIKW 173
>ZFIN|ZDB-GENE-040718-21 [details] [associations]
symbol:zfp106 "zinc finger protein 106 homolog
(mouse)" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS00028
PROSITE:PS50294 SMART:SM00320 SMART:SM00355 ZFIN:ZDB-GENE-040718-21
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0008270 GO:GO:0005622
InterPro:IPR018391 SMART:SM00564 GeneTree:ENSGT00700000104359
EMBL:BX322589 IPI:IPI00996576 Ensembl:ENSDART00000112075
Ensembl:ENSDART00000132969 Uniprot:F1QN33
Length = 1636
Score = 180 (68.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 61/220 (27%), Positives = 103/220 (46%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG----TV 266
H +AV G+ ++NGL+Y+ S D++++ + +C+ + H VN + VS GG +
Sbjct: 1283 HQEAVNGMHIHNGLLYTCSGDRTIRAFSLITRKCVAVFEGHSSKVNCLLVSCGGGLQQRL 1342
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
Y+GS+D+ IR ++ E +E+ L L + +L+ G + S++
Sbjct: 1343 YSGSSDQTIRCYSLKTKE-------CVEQLSLPDRVLCLHNRWKILYIGLANGSVITLSL 1395
Query: 327 EDSANHMVVTGALRGHG-KAILCLINVA-G---LLMSGSADRTVRIWQRGSDGRFGCLA- 380
++ V HG +A+ CL G +L+ GS D T+ + D + G L
Sbjct: 1396 RNNKQLDV----FECHGPRAVSCLATAQEGARRILLVGSYDTTISV----RDAKSGLLLR 1447
Query: 381 VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
LEGHTK V + V + VFSGS D + A +
Sbjct: 1448 TLEGHTKTVLCMKVVND-------LVFSGSSDQSVHAHNI 1480
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV ++ ++ L+ S S D+++KIW +++ H D V +V S +
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR-E 327
++D +++W +H TLE H+ V ++ S D +L S + D ++ +WD
Sbjct: 355 SASDSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 328 DSANHMVVTGALRGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEG 384
S H L GH + +I + + LL S S D TV+IW G+ G L LEG
Sbjct: 411 GSLQH-----TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT----GSLQHTLEG 461
Query: 385 HTKPVKSL 392
H V+S+
Sbjct: 462 HRDWVRSV 469
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H D V + ++ L+ S S D ++KIW +++ H D V +V S +
Sbjct: 378 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+ S D +++W +H TLE H+ V ++ S D +L S + DR++ +WD E
Sbjct: 438 SASDDSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE 493
Query: 328 DSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIW 368
+H L GH + + + + LL S S D+TVRIW
Sbjct: 494 -KGSHK---HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIW 532
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 63/277 (22%), Positives = 117/277 (42%)
Query: 69 PSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTT 128
P+ + PD ++S C+ +++ GH+ + ++ H+ AS+ + DRT
Sbjct: 272 PNWIETKPDVANHWSP----CLQALE-GHEAAVLSVSYSHDSRLLASASD----DRTVKI 322
Query: 129 W-TSINTFNDN-DSSSGSVKSVTFC-DGKIFTAHQDCKIRVWQXXXXXXXXXX------- 178
W T + + S V+SV F D ++ + D +++W
Sbjct: 323 WDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWV 382
Query: 179 -XXXXXVNDRLLRFMLPNSYVTV---RRHKKKLWIE-HGDAVTGLAVNNG--LIYSVSWD 231
+ +LL +S V + + +E H D V + ++ L+ S S D
Sbjct: 383 RSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDD 442
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALI 290
++KIW +++ H D V +V S + + S DR +R+W +H
Sbjct: 443 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKH--- 499
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TLE H S V +++ S D +L S + D+++ +WD E
Sbjct: 500 -TLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED-SANHMVVTGALRGHGKAILC 348
+ LE H++AV +++ S D +L S + DR++ +WD E S H L GH +
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQH-----TLEGHSDLVRS 343
Query: 349 LI-NVAGLLMSGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAVTEEGQNGVVSV 406
+I + L++ ++D TV+IW G+ G L LEGH V+S+ + + Q +
Sbjct: 344 VIFSHDSRLLASASDSTVKIWDTGT----GSLQHTLEGHRDWVRSVI-FSHDSQ----LL 394
Query: 407 FSGSLDGEIRAW 418
S S D ++ W
Sbjct: 395 ASASDDSTVKIW 406
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 180 (68.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 88/362 (24%), Positives = 152/362 (41%)
Query: 85 ASHLCINSVQL-GHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDN--DSS 141
AS L + Q GH +G ++ H+ AS+ D T W + +F N +
Sbjct: 249 ASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASG----DGTVKIWDTATSFLQNTLEGH 304
Query: 142 SGSVKSVTFC-DGKIF-TAHQDCKIRVWQXXXXX-----------------XXXXXXXXX 182
+ VKSV F D ++ +A D +++W
Sbjct: 305 NEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIAS 364
Query: 183 XVNDRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGL--AVNNGLIYSVSWDKSLKIWRAS 240
NDR +R + + RH + +H D+V + A ++ + S S ++KIW
Sbjct: 365 GSNDRTVRIW--ETTTGLLRHTFE---DHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Query: 241 DLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
++ H+D VN+V+ S + + S DR +++W + +L TLE H
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW----HAATGSLQRTLEGHNDW 475
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI--NVAGLLM 357
V ++ S D ++ S + D ++ +WD +A + + L H + ++ + + LL
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWD---TAT-VPLQNNLESHDNWVRSVVFSHDSRLLA 531
Query: 358 SGSADRTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIR 416
S S D TV+IW D G L LEGH V S V+ + +++ S S DG ++
Sbjct: 532 SASDDMTVKIW----DTATGSLENTLEGHDDRVNS---VSFSPDSRLLA--SASDDGTVK 582
Query: 417 AW 418
W
Sbjct: 583 IW 584
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 73/319 (22%), Positives = 132/319 (41%)
Query: 71 LQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNF-LYAASSHEINVYDRTGTTW 129
L S D T+ + + + GH + + H+ L A+ S++ V TT
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG 379
Query: 130 TSINTFNDNDSSSGSVKSVTFC-DGK-IFTAHQDCKIRVWQXXXXXXXXXXXXXXX-VND 186
+TF D++ S V +V+F D + + +A +++W VN
Sbjct: 380 LLRHTFEDHEDS---VMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 187 RLLRFMLPNSYVTVRRHKK---KLW----------IE-HGDAVTGLAVNNG--LIYSVSW 230
+ F P+S + K+W +E H D V + ++ LI S S
Sbjct: 437 --VSFS-PDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD 493
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHAL 289
D ++KIW + + ++++H++ V +V S + + S D +++W + +L
Sbjct: 494 DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW----DTATGSL 549
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
TLE H VN+++ S D +L S + D ++ +W G+ G L
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS--GRVAISLAF 607
Query: 350 INVAGLLMSGSADRTVRIW 368
+ + LL S D TV+IW
Sbjct: 608 SHTSNLLASAMDDGTVKIW 626
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 173 (66.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 54/178 (30%), Positives = 90/178 (50%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV-AVSAGGTVY 267
H DAV+GLA G +YS S D+S+K+W A++ +E++ H+DAV A+ A+S V
Sbjct: 240 HRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
G D +RVW P + L+ H+ +++ + L ++ ++ SGA D S+ +W
Sbjct: 300 AGGRDGTVRVWKIP---EESQLV--FYGHQGSIDCIHLINEEHMV-SGADDGSVALWGLS 353
Query: 328 DSANHMVVTGALRGHGK----------AILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ A HG+ ++ L+N L+ +GS + VR+WQ G R
Sbjct: 354 KKRPLALQREAHGLHGEPGLEQPFWVSSVAALLNT-DLVATGSHNARVRLWQCGEGFR 410
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALI 290
K ++ +D+R L + H+ ++ + ++ +++ + D I W+ K H +I
Sbjct: 129 KEIQAPAPTDIRVL---RGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLH-VI 184
Query: 291 ATLEK--------HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+K H S V +A+S DG L SG + IL+W+ + S H+ GH
Sbjct: 185 PRAKKGAQGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQ-SCQHLYT---FTGH 240
Query: 343 GKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
A+ L G L S S DR+V++W + + L GH V +L A++ E
Sbjct: 241 RDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSY---VETLFGHQDAVAALDALSRE-- 295
Query: 401 NGVVSVFSGSLDGEIRAWQV 420
V +G DG +R W++
Sbjct: 296 ---CCVTAGGRDGTVRVWKI 312
Score = 142 (55.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 251 HEDAVNAVAVSAGGTVYTGSADRK--IRVWAKPFNEKRHALIATLEKHKSAVNALALSDD 308
H V +A+S+ G Y S DR I +W +H + T H+ AV+ LA
Sbjct: 198 HSSHVLCMAISSDGK-YLASGDRSKLILIWEA--QSCQH--LYTFTGHRDAVSGLAFRKG 252
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVR 366
L+S + DRS+ VW+ + N V T L GH A+ L ++ + +G D TVR
Sbjct: 253 THQLYSTSHDRSVKVWNAAE--NSYVET--LFGHQDAVAALDALSRECCVTAGGRDGTVR 308
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPN 426
+W+ + + V GH + + + EE + SG+ DG + W +S
Sbjct: 309 VWKIPEESQL----VFYGHQGSIDCIHLINEE------HMVSGADDGSVALWGLS----K 354
Query: 427 SSPLNLQK 434
PL LQ+
Sbjct: 355 KRPLALQR 362
Score = 40 (19.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 148 VTFCDGKIFTAHQDCKIRVW 167
+T D IF+A +DC I W
Sbjct: 154 ITPDDLAIFSAAKDCTIIKW 173
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 173 (66.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 54/178 (30%), Positives = 90/178 (50%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV-AVSAGGTVY 267
H DAV+GLA G +YS S D+S+K+W A++ +E++ H+DAV A+ A+S V
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVT 302
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
G D +RVW P + L+ H+ +++ + L ++ ++ SGA D S+ +W
Sbjct: 303 AGGRDGTVRVWKIP---EESQLV--FYGHQGSIDCIHLINEEHMV-SGADDGSVALWGLS 356
Query: 328 DSANHMVVTGALRGHGK----------AILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ A HG+ ++ L+N L+ +GS + VR+WQ G R
Sbjct: 357 KKRPLALQREAHGLHGEPGLEQPFWISSVAALLNT-DLVATGSHNACVRLWQCGEGFR 413
Score = 145 (56.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALI 290
K ++ +D+R L + H+ ++ + ++ +++ + D I W+ K H +I
Sbjct: 132 KEIQAPAPTDIRVL---RGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLH-VI 187
Query: 291 ATLEK--------HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+K H S + +A+S DG L SG + IL+W+ + S H+ GH
Sbjct: 188 PRAKKGTQGQPSGHSSHILCMAISSDGKYLASGDRSKLILIWEAQ-SCQHLYT---FTGH 243
Query: 343 GKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
A+ L G L S S DR+V++W + + L GH V +L A++ E
Sbjct: 244 RDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSY---VETLFGHQDAVAALDALSRE-- 298
Query: 401 NGVVSVFSGSLDGEIRAWQV 420
V +G DG +R W++
Sbjct: 299 ---CCVTAGGRDGTVRVWKI 315
Score = 140 (54.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 53/188 (28%), Positives = 84/188 (44%)
Query: 251 HEDAVNAVAVSAGGTVYTGSADRK--IRVWAKPFNEKRHALIATLEKHKSAVNALALSDD 308
H + +A+S+ G Y S DR I +W +H + T H+ AV+ LA
Sbjct: 201 HSSHILCMAISSDGK-YLASGDRSKLILIWEA--QSCQH--LYTFTGHRDAVSGLAFRRG 255
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVR 366
L+S + DRS+ VW+ + N V T L GH A+ L ++ + +G D TVR
Sbjct: 256 THQLYSTSHDRSVKVWNAAE--NSYVET--LFGHQDAVAALDALSRECCVTAGGRDGTVR 311
Query: 367 IWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPN 426
+W+ + + V GH + + + EE + SG+ DG + W +S
Sbjct: 312 VWKIPEESQL----VFYGHQGSIDCIHLINEE------HMVSGADDGSVALWGLS----K 357
Query: 427 SSPLNLQK 434
PL LQ+
Sbjct: 358 KRPLALQR 365
Score = 40 (19.1 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 148 VTFCDGKIFTAHQDCKIRVW 167
+T D IF+A +DC I W
Sbjct: 157 ITPDDLAIFSAAKDCTIIKW 176
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 176 (67.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 58/177 (32%), Positives = 91/177 (51%)
Query: 245 LESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALA 304
L++++ H ++V AV S GS D +R+W + +L TLE H V ++A
Sbjct: 696 LQTLEGHSNSVWAVLAS-------GSDDETVRLW----DPATGSLQQTLEGHSGWVLSVA 744
Query: 305 LSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSAD 362
S DG +L SG+ D+++ +WD + + LRGH + + + G LL SGS D
Sbjct: 745 FSPDGRLLASGSFDKTVRLWDPATGS----LQQTLRGHSNWVRSVAFSPDGRLLASGSFD 800
Query: 363 RTVRIWQRGSDGRFGCLA-VLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+TVR+W D G L L GH+ V+S+ A + +G+ + SGS D +R W
Sbjct: 801 KTVRLW----DPATGSLQQTLRGHSDTVRSV-AFSPDGR----LLASGSFDKTVRLW 848
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 59/206 (28%), Positives = 101/206 (49%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
++ S S D+++++W + ++++ H V +VA S G + +GS D+ +R+W
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLW---- 764
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ +L TL H + V ++A S DG +L SG+ D+++ +WD + + LRGH
Sbjct: 765 DPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGS----LQQTLRGH 820
Query: 343 GKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
+ + + G LL SGS D+TVR+W D G L T +K + Q
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLW----DPATGTLQ----QTLIIKGTVTELQFSQ 872
Query: 401 NG-VVSVFSGSLDGEIRAWQVSVSCP 425
+G +S GSL+ + R S P
Sbjct: 873 DGSYISTNLGSLNIQSRCGNNLSSSP 898
Score = 148 (57.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 36/118 (30%), Positives = 67/118 (56%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H V +A + +G L+ S S+DK++++W + ++++ H + V +VA S G +
Sbjct: 736 HSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLA 795
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+GS D+ +R+W + +L TL H V ++A S DG +L SG+ D+++ +WD
Sbjct: 796 SGSFDKTVRLW----DPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/197 (31%), Positives = 94/197 (47%)
Query: 211 HGDAVTGLAVN---NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-V 266
H +AV A + G + SV D +++IW ++K H + V VA S +
Sbjct: 139 HTEAVLNCAFSPDGKGFV-SVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALA-----LSDDGTVLFSGACDRSI 321
T + IR+W P K+ L +TL+ H + L+ L+ L S + D +I
Sbjct: 198 ATAGMEGDIRIWC-PQTGKQ--LGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTI 254
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLI-NVAGLLMSGSADRTVRIWQRGSDGRFGCLA 380
+WD E N M +L GH ++ CL GL+ SGS DRTVR++ +DGR +
Sbjct: 255 RIWDTESCKNLM----SLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNT-TDGRL--VR 307
Query: 381 VLEGHTKPVKSLTAVTE 397
VL+GH V +L T+
Sbjct: 308 VLDGHAHWVNTLALNTD 324
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 55/213 (25%), Positives = 98/213 (46%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L GLIYS S D++++++ +D R + + H VN +A++ + TG
Sbjct: 271 HTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTG 330
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
S D K ++ A LE++ + A S +L SG+ D ++++W+ S
Sbjct: 331 SYDHT----GKEYDTLEEAQRVALERYN---DVKAKSKGMEILISGSDDFTVIMWN--PS 381
Query: 330 ANHMVVTGALRGHGKAI-LCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
++ L GH + I L + G S S D+++++W G G+F L GH
Sbjct: 382 VTKTSIS-RLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD-GQSGKF--LGNFRGHVG 437
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + ++ + SGS D ++ W +
Sbjct: 438 AVYQVCWSSDSRY-----LVSGSKDSTLKIWDI 465
Score = 144 (55.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 53/191 (27%), Positives = 89/191 (46%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR 286
S S D +++IW + L S+ H +V + G +Y+GS DR +RV FN
Sbjct: 247 SSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRV----FNTTD 302
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI 346
L+ L+ H VN LAL+ D VL +G+ D + +D + A + AL + +
Sbjct: 303 GRLVRVLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRV----ALERYND-V 356
Query: 347 LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+L+SGS D TV +W ++ L GH + + +L + + +G+ +
Sbjct: 357 KAKSKGMEILISGSDDFTVIMWNPSVTKT--SISRLTGHQQLI-NLVSFSPDGRYFASAS 413
Query: 407 FSGSL---DGE 414
F S+ DG+
Sbjct: 414 FDKSIKLWDGQ 424
Score = 134 (52.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 59/214 (27%), Positives = 96/214 (44%)
Query: 211 HGDAVTGLAVNNGLIYSV-SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-T 268
H V LA+N + S+D + K + + +++ + D A S G + +
Sbjct: 312 HAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVK---AKSKGMEILIS 368
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GS D + +W P K I+ L H+ +N ++ S DG S + D+SI +WD +
Sbjct: 369 GSDDFTVIMW-NPSVTKTS--ISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQ- 424
Query: 329 SANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
S + G RGH A+ +C + + L+SGS D T++IW + L GH
Sbjct: 425 SGKFL---GNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKME---KELPGHA 478
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V ++ + +G V SGS D +R W V
Sbjct: 479 DEVYTVDW-SPDGDR----VASGSKDRLLRIWTV 507
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 52/187 (27%), Positives = 78/187 (41%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S+ H +AV A S G + D +R+W + H TL+ H + V
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTH----TLKGHTNWVL 186
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL------INVAGL 355
+A S D + + + I +W + + L+GH K I L +N +
Sbjct: 187 QVAWSPDSKKIATAGMEGDIRIWCPQTGKQ---LGSTLKGHTKFITGLSWEPFHLNPKCV 243
Query: 356 -LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
L S S D T+RIW S L L GHT V L + G G++ +SGS D
Sbjct: 244 RLASSSKDSTIRIWDTESCKN---LMSLSGHTMSVTCL----KWGGEGLI--YSGSQDRT 294
Query: 415 IRAWQVS 421
+R + +
Sbjct: 295 VRVFNTT 301
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 59/248 (23%), Positives = 105/248 (42%)
Query: 140 SSSGSVKSVTFC-----DGKIFTAHQDCKIRVWQXXXXXXXXXXXXXXX-VNDRLLR--F 191
S SG SVT C +G I++ QD +RV+ VN L +
Sbjct: 267 SLSGHTMSVT-CLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY 325
Query: 192 ML-PNSYV-TVRRHK-----KKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRC 244
+L SY T + + +++ +E + V + ++ S S D ++ +W S +
Sbjct: 326 VLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKT 385
Query: 245 -LESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
+ + H+ +N V+ S G + + S D+ I++W + + + H AV
Sbjct: 386 SISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW----DGQSGKFLGNFRGHVGAVYQ 441
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAG-LLMSGS 360
+ S D L SG+ D ++ +WD + + L GH + + + G + SGS
Sbjct: 442 VCWSSDSRYLVSGSKDSTLKIWDIKTKK----MEKELPGHADEVYTVDWSPDGDRVASGS 497
Query: 361 ADRTVRIW 368
DR +RIW
Sbjct: 498 KDRLLRIW 505
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 174 (66.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 190 RFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIK 249
RF L ++ H K + H D VT L N + + S+D ++KIW+ C++++
Sbjct: 362 RFKLEKNW-RKGTHTIKTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLT 420
Query: 250 AHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
H V A+ V + +G D I+VW N IAT H+ AV ++ ++
Sbjct: 421 GHTKGVRAL-VFDNQKLISGGLDSTIKVW----NYHTGQCIATYRGHEDAVVSVDFTNKS 475
Query: 310 TVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRI 367
V SG+ D ++ VW + + LRGH + + + + + + S S D T+R+
Sbjct: 476 IV--SGSADHTVRVWHVDSRTCY-----TLRGHTDWVNHVKIHSASNTIFSASDDTTIRM 528
Query: 368 WQRGSDGRFGCLAVLEG 384
W S+ C+ V G
Sbjct: 529 WDMNSNE---CIKVFGG 542
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/132 (33%), Positives = 59/132 (44%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ TL H V AL D L SG D +I VW+ + T RGH A++ +
Sbjct: 416 VKTLTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYH--TGQCIAT--YRGHEDAVVSV 469
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
++SGSAD TVR+W D R C L GHT V + N ++FS
Sbjct: 470 DFTNKSIVSGSADHTVRVWH--VDSRT-CYT-LRGHTDWVNHVKI--HSASN---TIFSA 520
Query: 410 SLDGEIRAWQVS 421
S D IR W ++
Sbjct: 521 SDDTTIRMWDMN 532
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
I T H V L + L +G+ D +I +W + DS V T L GH K + L
Sbjct: 376 IKTFTGHSDGVTCLQFNRK--YLMTGSYDTTIKIW-KIDSGE-CVKT--LTGHTKGVRAL 429
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
+ L+SG D T+++W + G+ C+A GH V S+ + S+ SG
Sbjct: 430 VFDNQKLISGGLDSTIKVWNYHT-GQ--CIATYRGHEDAVVSVDFTNK-------SIVSG 479
Query: 410 SLDGEIRAWQV-SVSC 424
S D +R W V S +C
Sbjct: 480 SADHTVRVWHVDSRTC 495
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 170 (64.9 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 211 HGDAVTGLAVNNGL---IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-V 266
H + V +A NN + + S+DK+ K+W A +C + + H + +A + T V
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV 192
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D ++W E+ ++TL H + + +L + G L +G+ D + ++WD
Sbjct: 193 ATGSMDTTAKLWDVESGEE----VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD- 247
Query: 327 EDSANHMVVTGALRGHGKAILCL-INV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
S + V L GH I C+ N L+ + S D++ ++W G+ CLA L G
Sbjct: 248 VPSGRKVHV---LSGHRGEISCVQFNWDCSLIATASLDKSCKVWD-AEGGQ--CLATLLG 301
Query: 385 HTKPV 389
H V
Sbjct: 302 HNDEV 306
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPF 282
LI + S DKS K+W A +CL ++ H D V V + G + T SAD RV F
Sbjct: 275 LIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRV----F 330
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + LE HK ++ + + G+ + + + D++ VW + A V L GH
Sbjct: 331 STDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQV----LEGH 386
Query: 343 GKAIL-CLINVAG-LLMSGSADRTVRIW 368
I C N G +++GS D T RIW
Sbjct: 387 SDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAH-EDAVNAVAVSAGGTVY 267
H + LA N + L+ + S D + K+W + ++ H + ++ + G +
Sbjct: 176 HTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV 235
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TGS D +W P K H L H+ ++ + + D +++ + + D+S VWD E
Sbjct: 236 TGSFDHTAILWDVPSGRKVHVLSG----HRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L GH +L + N G L+ + SAD T R++ S F CL LEGH
Sbjct: 292 --GGQCLAT--LLGHNDEVLDVCFNYTGQLIATASADGTSRVF---STDTFQCLCQLEGH 344
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSV-SC 424
+ S +G V + S+D R W V +C
Sbjct: 345 KGEI-SKVCFNAQGSR----VLTASVDKTSRVWCVKTGAC 379
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/210 (26%), Positives = 96/210 (45%)
Query: 215 VTGLAVN-NGLIYSV-SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGS 270
+T +A N +G + S+D++ KIW + L +++ H + V A+A + G V TGS
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGS 154
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ ++W+ + T H + + LA + T++ +G+ D + +WD E
Sbjct: 155 FDKTCKLWSAETGK----CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGE 210
Query: 331 NHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
L GH I+ L N G L++GS D T +W S GR + VL GH
Sbjct: 211 E----VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS-GRK--VHVLSGHRGE 263
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+ + V +++ + SLD + W
Sbjct: 264 I---SCVQFNWDCSLIA--TASLDKSCKVW 288
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 171 (65.3 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S++ H +AV +VA S G + +GS D +R W E H T + H+ V
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS-TETPHF---TCQGHRHWVL 160
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL----INV---AG 354
+++ S DG L SG + IL+WD V AL GH K I L ++
Sbjct: 161 SISWSPDGKKLASGCKNGQILLWDPSTGKQ---VGRALAGHSKWITALSWEPLHANPECR 217
Query: 355 LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
+ S S D +VR+W + GR C +L GHT+ V L G +G++ +S S D
Sbjct: 218 YVASSSKDGSVRVWDTTA-GR--CERILTGHTQSVTCL----RWGGDGLL--YSASQDRT 268
Query: 415 IRAWQ 419
I+ W+
Sbjct: 269 IKVWR 273
Score = 153 (58.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 57/214 (26%), Positives = 102/214 (47%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 245 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 304
Query: 270 SAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ + + V A+ + R +L E+ S N L L SG+ D ++ +W +
Sbjct: 305 AFEPAEASVNAQ---DLRGSLQELKERALSRYN-LVRGRGLERLVSGSDDFTLFLWSPAE 360
Query: 329 SANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
+ + GH I + + ++ S S D+++++W G G++ LA L GH
Sbjct: 361 DKKPLA---RMTGHQALINQVLFSPDSRIIASASFDKSIKLWD-GRTGKY--LASLRGHV 414
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 415 AAVYQI-AWSADSR----LLVSGSSDSTLKVWDV 443
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 58/201 (28%), Positives = 91/201 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE 284
+ S S D S+++W + RC + H +V + G +Y+ S DR I+VW
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVW------ 272
Query: 285 KRH--ALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ H L TL+ H VN +ALS D L +GA + + E S N + G+L+
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA------EASVNAQDLRGSLQEL 325
Query: 343 GKAILCLINVA---GL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
+ L N+ GL L+SGS D T+ +W D + LA + GH + V
Sbjct: 326 KERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKK--PLARMTGHQALINQ---VLF 380
Query: 398 EGQNGVVSVFSGSLDGEIRAW 418
+ +++ S S D I+ W
Sbjct: 381 SPDSRIIA--SASFDKSIKLW 399
Score = 140 (54.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+I S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 386 IIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 441
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L A L H V A+ S DG + SG D+ + +W R
Sbjct: 442 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 51 (23.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 142 SGSVKSVTFC-----DGKIFTAHQDCKIRVWQ 168
+G +SVT C DG +++A QD I+VW+
Sbjct: 243 TGHTQSVT-CLRWGGDGLLYSASQDRTIKVWR 273
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 175 (66.7 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 77/361 (21%), Positives = 150/361 (41%)
Query: 66 PSVPSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNF--LYAASSHE-INVY 122
P P ++ P +N S + ++ GH + + ++ + LY+AS+ + ++
Sbjct: 610 PEYPLIEN-QPSNPLNSELTSIVHLS----GHDERVCSLLINQDKTKLYSASADGYVKIW 664
Query: 123 DRTGTTWTS-INTFNDNDSSSGSVKSVTFCDGKIFTAHQDCKIRVWQXXXXXXXXXXXXX 181
+ T S I + + S++ + + +FTA D I++W
Sbjct: 665 NLTNNEDLSKIQMIDSFRAHRRSIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTTTTSKQ 724
Query: 182 XXVNDRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRA 239
+ +SY + + + +H V + ++ N + S S+DK +KI+
Sbjct: 725 SSSSSS-------SSYECIGKLE-----DHTAEVNDMCIDIENNFLVSCSFDKQIKIYDL 772
Query: 240 SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSA 299
S +C++S+ AH ++ ++ +S G +++ S D+ I++W E + + H +
Sbjct: 773 STFKCIKSLNAHGKSIKSIYMS-GKYLFSSSNDQSIKIWDL---EMCMCVYGMNDAHDAP 828
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAIL-CLINVAGLLMS 358
+ +L + G LFS + D I W+ + T L H AI L+ G L
Sbjct: 829 ITSLRMF--GNRLFSASKDGEIKDWN----LSTFQPTTTLDQHNMAITDILVTSNGYLFV 882
Query: 359 GSADRTVRIWQRGSDGR-FGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
S D T+RI + ++ + H V SL +G+ +FSG D I+
Sbjct: 883 SSDDSTIRIIDISNQNEPIKIISSTKAHRSGVNSLAT---DGKR----IFSGGCDNLIKV 935
Query: 418 W 418
W
Sbjct: 936 W 936
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/243 (24%), Positives = 106/243 (43%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRA------SDLRCLESIKAHEDAVNAVAVSA 262
H + V L +N +YS S D +KIW S ++ ++S +AH ++ + ++
Sbjct: 636 HDERVCSLLINQDKTKLYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRRSIEKMLLNE 695
Query: 263 GGTVYTGSADRKIRVWAKPF--------------NEKRHALIATLEKHKSAVNALALSDD 308
++T S+D I++W+ P + + I LE H + VN + + +
Sbjct: 696 K-YLFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKLEDHTAEVNDMCIDIE 754
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
L S + D+ I ++D + +L HGK+I + L S S D++++IW
Sbjct: 755 NNFLVSCSFDKQIKIYD----LSTFKCIKSLNAHGKSIKSIYMSGKYLFSSSNDQSIKIW 810
Query: 369 QRGSDGRFGCLAVL---EGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCP 425
C+ V + H P+ SL G +FS S DGEI+ W +S P
Sbjct: 811 DLEM-----CMCVYGMNDAHDAPITSLRMF---GNR----LFSASKDGEIKDWNLSTFQP 858
Query: 426 NSS 428
++
Sbjct: 859 TTT 861
Score = 151 (58.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H +T L + ++S S D +K W S + ++ H A+ + V++ G ++ S
Sbjct: 825 HDAPITSLRMFGNRLFSASKDGEIKDWNLSTFQPTTTLDQHNMAITDILVTSNGYLFVSS 884
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
D IR+ + +I++ + H+S VN+LA DG +FSG CD I VW+
Sbjct: 885 DDSTIRIIDISNQNEPIKIISSTKAHRSGVNSLAT--DGKRIFSGGCDNLIKVWN 937
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 155 (59.6 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFN 283
I +VS D S+ ++ S + L +K H D VN S + +G D +RVW N
Sbjct: 1929 IATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVW----N 1984
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
K + L+ H S++ + D + S + D S+ VWD + + +T +LR
Sbjct: 1985 IKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSE---IT-SLRHQT 2040
Query: 344 KA--ILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+ ++ + +G + S S D ++ W + CLA L GH+ P+K + G
Sbjct: 2041 RISDVVSSSDASGRIFSSSDDGIIKSWYPVAGS---CLATLTGHSGPIKQVQFNPNSGGG 2097
Query: 402 GVVSVFSGSLDGEIRAWQVSVSCPNSS 428
G S S S V++S +SS
Sbjct: 2098 GSSSFSSFSSFSSSSDAPVTLSIASSS 2124
Score = 147 (56.8 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKP-- 281
LI S SWD ++KIW D + +K DA + S ++ ++ + + K
Sbjct: 1664 LIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYG-SIKSCKFSANSKQILATTMKNDV 1722
Query: 282 --FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
F+ LI+ + H +VN +LS+DG + +G+ D + VW + + +
Sbjct: 1723 LLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS--STLGTQLTNFLI 1780
Query: 340 RGHGKA-ILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
G A L LL G+ D TVR++ S+ + +A L GHT+ + S+T +
Sbjct: 1781 PGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSIT-FSPS 1839
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G N + S S D I+ W V
Sbjct: 1840 G-NLIAST---SEDLLIKVWNV 1857
Score = 130 (50.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 57/227 (25%), Positives = 103/227 (45%)
Query: 199 TVRRHKKKLWIEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESI-KAHEDAV 255
T+ R KL H A+T + + +G LI S S D +K+W + +I KAH D +
Sbjct: 1816 TIYREVAKLH-GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI 1874
Query: 256 NAVAVSAGGT--VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
N ++ + + + S D +VW++ F ++T E + + S DG +
Sbjct: 1875 NCISFNPTNECELISCSDDYSTKVWSR-FTTS--TTLST-EGSTNTIKHCVYSPDGKYIA 1930
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINV-AGLLMSGSADRTVRIWQRG 371
+ + D SI V+ S+ ++ L+GH + C + + L+SG D +R+W
Sbjct: 1931 TVSRDCSIAVY--LCSSKKLLFR--LKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIK 1986
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+ CL +GH+ ++ A + Q ++S S DG ++ W
Sbjct: 1987 TQKELLCL---KGHSSSIEK--AFFTKDQKYIISA---SFDGSVKVW 2025
Score = 76 (31.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 61 SLQTLPSVPSLQKLSPDETIN-FSSASHLCINSVQLGHKLPIGCIAVHHN----FLYAAS 115
S+ PS + S D I ++ +H +++ H PI CI+ + + +
Sbjct: 1833 SITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSD 1892
Query: 116 SHEINVYDRTGTTWTSINTFNDNDSSSGSVKSVTFC-DGK-IFTAHQDCKIRVW 167
+ V+ R TT T+++T + S+ ++K + DGK I T +DC I V+
Sbjct: 1893 DYSTKVWSRF-TTSTTLST----EGSTNTIKHCVYSPDGKYIATVSRDCSIAVY 1941
Score = 46 (21.3 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 125 TGTTWTSINTFNDNDSSS 142
T T T+ NT + NDSSS
Sbjct: 663 TSTATTTTNTQDSNDSSS 680
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 173 (66.0 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 63/222 (28%), Positives = 103/222 (46%)
Query: 211 HGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVY 267
H VT + + + L+YSVS D +++ WRA +L C ++H + + S G V
Sbjct: 496 HTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQYVV 555
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TGS D R+W+ EK HALI H V +A +G + +G+ D S+ +W
Sbjct: 556 TGSKDLSARLWSL---EKEHALII-YAGHTQDVECVAFHPNGNYIATGSADHSVRLWCAT 611
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAGLLMSGSADRT-VRIWQRGSDGRFGCLAVLEGH 385
S M V R +A+ L + G +++ + + T VRI+ + + LA L+ H
Sbjct: 612 -SGKLMRVFADCR---QAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQ---LAELKDH 664
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNS 427
+ + SL+ T + + S DG +R W + P S
Sbjct: 665 SASISSLSWSTHNRH--LATACS---DGTLRLWDIKKLSPMS 701
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 174 (66.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 65/214 (30%), Positives = 95/214 (44%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
L + S L +W + + H D++NA+A S G + T + D K++VW
Sbjct: 315 LAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVW---- 370
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + I T +H S V A + G VLF+ + D SI WD N T R
Sbjct: 371 DIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTR-- 428
Query: 343 GKAILCL-INVAG-LLMSGSADR-TVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
+ C+ ++ +G ++ +GS D V IW + G+ L L GH PV S A +G
Sbjct: 429 -LSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQT-GQL--LDQLSGHEGPV-SAVAFAPDG 483
Query: 400 QNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQ 433
G++ SGS D R W V S PL LQ
Sbjct: 484 --GLL--VSGSWDKTARIWSVFNRTQTSEPLQLQ 513
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 57/217 (26%), Positives = 90/217 (41%)
Query: 211 HGDAVTGLAVN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTV-Y 267
H D++ LA + +G I + + D LK+W C+ + H V A + G V +
Sbjct: 342 HFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLF 401
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR-SILVWDR 326
T S D IR W R+ T S + +A+ G V+ +G+ D + +W
Sbjct: 402 TASLDGSIRAW--DLIRYRNFRTFTAPTRLS-FSCMAVDPSGEVVAAGSLDSFDVHIWSV 458
Query: 327 EDSANHMVVTGALRGHGKAILCLINV--AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+ + L GH + + GLL+SGS D+T RIW + + L+
Sbjct: 459 QTGQ----LLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQA 514
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
V AV + VS +LDG+I W V+
Sbjct: 515 DVLSV----AVRPDSSQLAVS----TLDGQISFWSVT 543
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 174 (66.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 56/177 (31%), Positives = 82/177 (46%)
Query: 254 AVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
AV ++A SA V G AD IR+W EK + HK AV AL + G++L
Sbjct: 67 AVTSIASSASSLVAVGYADGSIRIWD---TEKGTCEV-NFNSHKGAVTALRYNKVGSMLA 122
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRG 371
SG+ D I++WD + LRGH + L+ + G L+S S D+ +R+W
Sbjct: 123 SGSKDNDIILWDVVGESGLF----RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLE 178
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
+ C+ ++ GH V S+ EE V +GS D E+R + V N S
Sbjct: 179 TQH---CMQIVSGHHSEVWSVDTDPEERY-----VVTGSADQELRFYAVKEYSSNGS 227
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++K++ L+ S+ H+ V + +S+ G + TGS D+ +++W F + ++
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
A H +V + + LFS DR + WD D H++ L GH I CL
Sbjct: 621 FA----HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDA-DKFEHLLT---LEGHHAEIWCL 672
Query: 350 I--NVAGLLMSGSADRTVRIWQRGSDGRF 376
N L++GS DR++R W R + F
Sbjct: 673 AISNRGDFLVTGSHDRSMRRWDRSEEPFF 701
Score = 139 (54.0 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 41/107 (38%), Positives = 58/107 (54%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVW-AKP 281
LI + S DK+LKIW C +SI AH D+V V V +++ DR ++ W A
Sbjct: 596 LIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADK 655
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
F H L TLE H + + LA+S+ G L +G+ DRS+ WDR +
Sbjct: 656 FE---HLL--TLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/198 (23%), Positives = 88/198 (44%)
Query: 214 AVTGLAVNNGLIYSVSW-DKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYTGSA 271
AVT +A + + +V + D S++IW C + +H+ AV A+ + G + +GS
Sbjct: 67 AVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSK 126
Query: 272 DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSAN 331
D I +W + + + L H+ V L D G L S + D+ + VWD E
Sbjct: 127 DNDIILW----DVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 332 HMVVTGALRGHGKAILCLIN--VAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPV 389
+V+G H + + +++GSAD+ +R + G L V + + +
Sbjct: 183 MQIVSG----HHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSL-VSDSNANEI 237
Query: 390 KSLTAVTEEGQNGVVSVF 407
K+ + E + ++ +F
Sbjct: 238 KASEEHSTENKWEILKLF 255
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 56/236 (23%), Positives = 108/236 (45%)
Query: 200 VRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIW---------RASDLRCLESIKA 250
V+ H +W ++T + ++G + +VS D +K W +A+ + ++K+
Sbjct: 483 VKAHGGTIW-----SITPIPNDSGFV-TVSADHEVKFWEYQVKQKSGKATKKLTVSNVKS 536
Query: 251 HE--DAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSD 307
+ D V AVA+S + D ++V+ + + L +L HK V + +S
Sbjct: 537 MKMNDDVLAVAISPDAKHIAVALLDSTVKVFY--MDSLKFYL--SLYGHKLPVMCIDISS 592
Query: 308 DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTV 365
DG ++ +G+ D+++ +W + H ++ HG +++ + + L S DR V
Sbjct: 593 DGELIVTGSQDKNLKIWGLDFGDCHK----SIFAHGDSVMGVKFVRNTHYLFSIGKDRLV 648
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+ W +D +F L LEGH + L A++ G + +GS D +R W S
Sbjct: 649 KYWD--AD-KFEHLLTLEGHHAEIWCL-AISNRGD----FLVTGSHDRSMRRWDRS 696
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 173 (66.0 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 67/238 (28%), Positives = 109/238 (45%)
Query: 202 RHK-----KKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDA 254
RHK +KL I H V G++ + N + S S DK++++W L S K H
Sbjct: 503 RHKPQENTRKL-IGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQP 561
Query: 255 VNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V V S G + T S D+ R+WA + + L H + V+ + + +F
Sbjct: 562 VWDVKFSPLGHYFVTASHDQTARLWA---TDHIYPL-RIFAGHINDVDCVEFHPNSNYVF 617
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIWQRG 371
+G+ D++ +WD + N + V GH ++ CL ++ G L SG D + +W G
Sbjct: 618 TGSSDKTCRMWDVH-TGNCVRV---FLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIG 673
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
S R L + GH + SL ++ ++G V V SG D +R W V + ++ P
Sbjct: 674 SGRR---LKSMRGHARA--SLYSLAFS-RDGTVLV-SGCADNSVRVWDVKKNTNDAGP 724
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 169 (64.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 65/226 (28%), Positives = 101/226 (44%)
Query: 203 HKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDL-RCLESIKAHEDAVNAVAVS 261
H ++ G + AV + + + I+R + RC S++ H +AV +VA S
Sbjct: 16 HDAEITSSLGKTLESQAVETEKVLDIIYQPQA-IFRVRAVTRCTSSLEGHSEAVISVAFS 74
Query: 262 AGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
G + +GS D +R W E H T + H+ V +++ S DG L SG +
Sbjct: 75 PTGKYLASGSGDTTVRFWDLS-TETPHF---TCQGHRHWVLSISWSPDGKTLASGCKNGQ 130
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCL----INV---AGLLMSGSADRTVRIWQRGSD 373
IL+WD V L GH K I L ++ + S S D +VR+W +
Sbjct: 131 ILLWDPSTGKQ---VGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTA- 186
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
GR C +L GHT+ V L G +G++ +S S D I+ W+
Sbjct: 187 GR--CERILTGHTQSVTCL----RWGGDGLL--YSASQDRTIKVWR 224
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 53/214 (24%), Positives = 101/214 (47%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 196 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 255
Query: 270 SAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ + + + A+ + + +L ++ N L L SG+ D ++ +W +
Sbjct: 256 AFEPAEASINAQ---DLQGSLQELKDRALRRYN-LVRGQGPERLVSGSDDFTLFMWSPAE 311
Query: 329 SANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
+ + GH I + + ++ S S D+++++W G G++ LA L GH
Sbjct: 312 DKKPLA---RMTGHQALINQVLFSPDSRIIASASFDKSIKLWD-GRTGKY--LASLRGHV 365
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 366 AAVYQI-AWSADSR----LLVSGSSDSTLKVWDV 394
Score = 142 (55.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 80/293 (27%), Positives = 117/293 (39%)
Query: 140 SSSGSVKSVTFCDGKIFTAHQDCK-IRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYV 198
S SG +V F D T H C+ R W + + P++
Sbjct: 82 SGSGDT-TVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGK 140
Query: 199 TVRR----HKKKLWIEHGDAVTGLAVNNGLIY--SVSWDKSLKIWRASDLRCLESIKAHE 252
V R H K WI G + L N Y S S D S+++W + RC + H
Sbjct: 141 QVGRVLAGHSK--WIT-GLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHT 197
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRH--ALIATLEKHKSAVNALALSDDGT 310
+V + G +Y+ S DR I+VW + H L TL+ H VN +ALS D
Sbjct: 198 QSVTCLRWGGDGLLYSASQDRTIKVW------RAHDGVLCRTLQGHGHWVNTMALSTD-Y 250
Query: 311 VLFSGA---CDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTV 365
L +GA + SI D + S + ALR + L+ G L+SGS D T+
Sbjct: 251 ALRTGAFEPAEASINAQDLQGSLQELK-DRALRRYN-----LVRGQGPERLVSGSDDFTL 304
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+W D + LA + GH + V + +++ S S D I+ W
Sbjct: 305 FMWSPAEDKK--PLARMTGHQALINQ---VLFSPDSRIIA--SASFDKSIKLW 350
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+I S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 337 IIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 392
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L A L H V A+ S DG + SG D+ + +W R
Sbjct: 393 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 436
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +W A D + L + H+ +N V S + + S D+ I++W
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW---- 350
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +A+L H +AV +A S D +L SG+ D ++ VWD + A + L GH
Sbjct: 351 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK--AQKLAAD--LPGH 406
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + + G + SG D+ +RIW+R
Sbjct: 407 ADEVYAVDWSPDGQRVASGGKDKCLRIWRR 436
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 117 (46.2 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 77 DETINFSSA-SHLCINSVQL-GHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINT 134
D TI F A S +C ++Q ++ CI+ FL AA H + +YD T ++ T
Sbjct: 11 DHTIRFWEALSGICSRTIQHPDSQVNRLCISPDKRFLAAAGHHTVKLYDIKSTNPNALLT 70
Query: 135 FNDNDSSSGSVKSVTF-CDGK-IFTAHQDCKIRVWQXXXXXXXXXXXXXXXVND 186
F + +G+V V F C+GK + T+ +D +++W+ VND
Sbjct: 71 F---EGHTGNVTGVAFHCEGKWMVTSSEDGTVKIWETRTGTIQRSYNHQSPVND 121
Score = 93 (37.8 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 37/174 (21%), Positives = 75/174 (43%)
Query: 211 HGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHED-AVNAVAVSAGGTVY 267
H V + + N G I S ++++W +D +C + ED +V+++ V+ G++
Sbjct: 115 HQSPVNDVVIHPNQGEIISCDRAGTIRLWDLADNKCTSEMVPEEDVSVSSLTVATDGSLL 174
Query: 268 TGSADR-KIRVWAKPFNEKRHALIATLE--KHKSAVNALALSDDGTVLFSGACDRSILVW 324
+ +R + VW +R A + H + + LS D L + + D + +W
Sbjct: 175 CAANNRGNVFVWTLSQGLERTIATAMTQFSAHDQYITRVLLSPDVKKLATCSADHTAKIW 234
Query: 325 --DREDS--ANHMV---VTGALRGHGKAIL-CLINV-AGLLMSGSADRTVRIWQ 369
D E + A V + L H + + C + + L++ +D R+W+
Sbjct: 235 EVDVEPTLQAGKAVPFELEATLANHQRWVWDCAFSADSAYLVTACSDHYARLWE 288
Score = 74 (31.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 38/166 (22%), Positives = 64/166 (38%)
Query: 192 MLPNSYVTVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAH 251
M+P V+V L + ++ A N G ++ W S + R + AH
Sbjct: 154 MVPEEDVSV----SSLTVATDGSLLCAANNRGNVFV--WTLSQGLERTI-ATAMTQFSAH 206
Query: 252 EDAVNAVAVSAG-GTVYTGSADRKIRVW---AKPFNEKRHA----LIATLEKHKSAVNAL 303
+ + V +S + T SAD ++W +P + A L ATL H+ V
Sbjct: 207 DQYITRVLLSPDVKKLATCSADHTAKIWEVDVEPTLQAGKAVPFELEATLANHQRWVWDC 266
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
A S D L + D +W+ + A + GH + +C+
Sbjct: 267 AFSADSAYLVTACSDHYARLWELQSQA----IIRTYNGHHRGAVCV 308
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/191 (30%), Positives = 88/191 (46%)
Query: 210 EHGDAVTGLAV---NNGLIYSVSWDKSLKIW--RASDLRCLESIKAHEDAVNAVAVSAGG 264
+H D VT LAV NN ++ S + IW A+ + A+ED+ + A
Sbjct: 124 QHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVT 183
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEK-HKSAVNALALSDDGTVLFSGACDRSILV 323
++ T + I V + P H T+ K HK +V ALA++D GT+L SG ++ + V
Sbjct: 184 SLRTVGSSNNISVQSSP----SHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRV 239
Query: 324 WDREDSANHMVVTGALRGH--GKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAV 381
WD + M LRGH +L L + +SGS+D +R+W G CL
Sbjct: 240 WDPRTGSKSM----KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQR---CLHT 292
Query: 382 LEGHTKPVKSL 392
HT V +L
Sbjct: 293 YAVHTDSVWAL 303
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 211 HGDAVTGLAV-NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSA--GGTV 266
H D V A+ + S S D ++K W SD C +++ H D V +AV+A V
Sbjct: 83 HVDWVNDAALAGESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVV 142
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV--LFSGACDRSILVW 324
+G ++ +W + AL + + + ++ + +G V L + +I V
Sbjct: 143 ASGGLGGEVFIW-----DIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISV- 196
Query: 325 DREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAV- 381
+ S +H +GH +++ L +N G +L+SG ++ +R+W D R G ++
Sbjct: 197 --QSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVW----DPRTGSKSMK 250
Query: 382 LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
L GHT V+ L + G+ SGS D IR W +
Sbjct: 251 LRGHTDNVRVLL-LDSTGR----FCLSGSSDSMIRLWDL 284
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRH-ALIATLEKHKSAVNALALSDDGTVLFSGAC 317
A S GG+V T ++K+ N+ +H A I L+ KS+V S+D + LF+G+
Sbjct: 7 AGSNGGSVRTRK-EKKLTYVLNDANDTKHCAGINCLDVLKSSV-----SNDQSYLFTGSR 60
Query: 318 DRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGR 375
D ++ W ++ A T H + +AG L+S S+D TV+ W SDG
Sbjct: 61 DGTLKRWAFDEDATFCSAT--FESHVDWVNDAA-LAGESTLVSCSSDTTVKTWDGLSDGV 117
Query: 376 FGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSC-PNSSP 429
C L H+ V L + N VV+ SG L GE+ W + + P + P
Sbjct: 118 --CTRTLRQHSDYVTCLAVAAKN--NNVVA--SGGLGGEVFIWDIEAALSPVTKP 166
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 52/188 (27%), Positives = 86/188 (45%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H D V L N L+++ S+D ++ IW + + + H D V + + TGS
Sbjct: 301 HMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLI-TGS 359
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ IRVW N I+T H +V L++ V+ SG+ D+++ VW E
Sbjct: 360 LDKTIRVW----NYITGECISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVESRT 413
Query: 331 NHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ LRGH + + C+ ++ S S D T+R+W ++ CL V GH
Sbjct: 414 CY-----TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNS---CLKVFRGHVGQ 465
Query: 389 VKSLTAVT 396
V+ + +T
Sbjct: 466 VQKIIPLT 473
Score = 163 (62.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 58/189 (30%), Positives = 86/189 (45%)
Query: 237 WRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKH 296
WR R ++ K H D V + + ++TGS D I +W F K LI L H
Sbjct: 288 WRKGHCR-IQEFKGHMDGVLTLQFNYR-LLFTGSYDSTIGIWDL-FTGK---LIRRLSGH 341
Query: 297 KSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLL 356
V L D L +G+ D++I VW+ + T RGH ++L + + ++
Sbjct: 342 SDGVKTLYFDD--RKLITGSLDKTIRVWNY--ITGECIST--YRGHSDSVLSVDSYQKVI 395
Query: 357 MSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIR 416
+SGSAD+TV++W + R C L GHT+ V + + S FS S D IR
Sbjct: 396 VSGSADKTVKVWH--VESRT-CYT-LRGHTEWVNCVKLHPKS-----FSCFSCSDDTTIR 446
Query: 417 AWQVSV-SC 424
W + SC
Sbjct: 447 MWDIRTNSC 455
Score = 132 (51.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H D V L ++ + + S DK++++W C+ + + H D+V +V S + +GS
Sbjct: 341 HSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVD-SYQKVIVSGS 399
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
AD+ ++VW E R TL H VN + L FS + D +I +WD ++
Sbjct: 400 ADKTVKVWHV---ESRTCY--TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNS 454
Query: 331 NHMVVTGALRGHGKAI-LCLINVAGLLMSGSAD 362
V G + K I L + +V L ++D
Sbjct: 455 CLKVFRGHVGQVQKIIPLTIKDVENLATDNTSD 487
Score = 66 (28.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 356 LMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
L+S D T+++W D + G C+ GH + V + A N + SGS DG
Sbjct: 525 LLSCGLDNTIKLW----DVKTGKCIRTQFGHVEGVWDIAA-----DN--FRIISGSHDGS 573
Query: 415 IRAWQV-SVSC 424
I+ W + S C
Sbjct: 574 IKVWDLQSGKC 584
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 130
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 131 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 185
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 240
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 241 SVTGGKWIVSGSEDNLVYIWNL 262
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 175 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 230
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 285
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 286 TENIIASAALEN-DKTIKLWK 305
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 77
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 78 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 134 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 186
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 187 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 218
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/144 (29%), Positives = 68/144 (47%)
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI 346
+AL TL H AV+++ S +G L S + D+ I +W D ++G G
Sbjct: 9 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD-- 66
Query: 347 LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+ + + LL+S S D+T++IW S G+ CL L+GH+ V Q+ ++
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNFNPQSNLI-- 118
Query: 407 FSGSLDGEIRAWQVSVS-CPNSSP 429
SGS D +R W V C + P
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLP 142
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 54/219 (24%), Positives = 102/219 (46%)
Query: 211 HGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H AV L N L++S S DK++ +W + ++ +K H VN+ + G
Sbjct: 98 HSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLA 157
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TGS D +++W + ++ A + T + + V ++ +D + SG D I VWD
Sbjct: 158 CTGSDDGTVKLW----DIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 327 EDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQ-RGSDGRFGCLAVLE 383
N ++ + ++GHG ++ L ++ G L+S S D +VR+W R + C+ + +
Sbjct: 213 RQ--NKLIYS--MQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ 268
Query: 384 GHTKPV-KSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
G+ K+L + ++ +GS D + W +
Sbjct: 269 GNVHNFEKNLLRCSWSADGSKIA--AGSADRFVYIWDTT 305
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT---VYTGSADRKIRVWAKPFNEKRH 287
D ++K+W D+R S+ ++ ++V+ T + +G D I+VW + +++
Sbjct: 163 DGTVKLW---DIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVW----DLRQN 215
Query: 288 ALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANH----MVVTGALRGHG 343
LI +++ H +V L+LS DG+ L S + D S+ VWD A + G +
Sbjct: 216 KLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFE 275
Query: 344 KAIL-CLINVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
K +L C + G + +GSADR V IW + R + L GH V + EE
Sbjct: 276 KNLLRCSWSADGSKIAAGSADRFVYIWDT-TTRRI--VYKLPGHAGSVNEVAFHPEEP-- 330
Query: 402 GVVSVFSGSLD 412
V SGS D
Sbjct: 331 ---IVLSGSSD 338
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 41/150 (27%), Positives = 75/150 (50%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVW-AKPF 282
I S D +K+W + + S++ H D+V +++SA G+ + + S D +RVW +PF
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPF 257
Query: 283 NEKRHAL-IATLEKHKSAVNAL--ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K + I H N L + S DG+ + +G+ DR + +WD + +V L
Sbjct: 258 APKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWD---TTTRRIVY-KL 313
Query: 340 RGHGKAI--LCLINVAGLLMSGSADRTVRI 367
GH ++ + +++SGS+D+ + I
Sbjct: 314 PGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 141 (54.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 53/188 (28%), Positives = 81/188 (43%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALIATLEK 295
R+S L+ + + HE V G S DR I +W + + + ATL+
Sbjct: 41 RSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMW-NVYGDCEN--YATLKG 97
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
H AV L + DG++LFS + D+++ VWD E L+GH + C G
Sbjct: 98 HSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGER----VKRLKGHTSFVNSCFPARRG 153
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L +GS D TV++W D R +T V S+T Q + SG +D
Sbjct: 154 PQLACTGSDDGTVKLW----DIRKKASVHTFQNTYQVLSVTFNDTSDQ-----IISGGID 204
Query: 413 GEIRAWQV 420
+I+ W +
Sbjct: 205 NDIKVWDL 212
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 50/171 (29%), Positives = 73/171 (42%)
Query: 254 AVNAVAVSAGGTVYTGSAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVL 312
AV V V T +A +++ P + A I L H+ V +G L
Sbjct: 12 AVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATL 71
Query: 313 FSGACDRSILVWD-REDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQ 369
S DR IL+W+ D N+ L+GH A++ L N G LL S S D+TV +W
Sbjct: 72 ASSGYDRLILMWNVYGDCENY----ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWD 127
Query: 370 RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ R + L+GHT V S + G +GS DG ++ W +
Sbjct: 128 SETGER---VKRLKGHTSFVNSCFPA----RRGPQLACTGSDDGTVKLWDI 171
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/222 (20%), Positives = 98/222 (44%)
Query: 221 NNGLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTV-YTGSADRKIRVW 278
N + S +D+ + +W D ++K H AV + + G++ ++ S D+ + VW
Sbjct: 67 NGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVW 126
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF-SGACDRSILVWD-REDSANHMVVT 336
E+ + L+ H S VN+ + G L +G+ D ++ +WD R+ ++ H
Sbjct: 127 DSETGER----VKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVH---- 178
Query: 337 GALRGHGKAILCLIN-VAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAV 395
+ + + N + ++SG D +++W + + ++GH V L+ +
Sbjct: 179 -TFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNK---LIYSMQGHGDSVTGLS-L 233
Query: 396 TEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWNL 437
+ +G + S S+D +R W + P + + + N+
Sbjct: 234 SADGSY----LLSNSMDNSVRVWDIRPFAPKERCVKIFQGNV 271
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 256
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 311
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 312 TENIIASAALEN-DKTIKLWK 331
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K +AL TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 256
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 311
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 312 TENIIASAALEN-DKTIKLWK 331
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K +AL TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 256
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 311
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 312 TENIIASAALEN-DKTIKLWK 331
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K +AL TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 256
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 311
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 312 TENIIASAALEN-DKTIKLWK 331
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K +AL TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL GH + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTGHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 256
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVIS-TAC-HP 311
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 312 TENIIASAALEN-DKTIKLWK 331
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K +AL TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPF 282
L+ S S D +++IW S+K H D+V VA A G + SAD I++W F
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW--DF 179
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + I T+ H V+++A G + S + DR+I +W E + + V T GH
Sbjct: 180 QQS-YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW--EVATGYCVKT--YTGH 234
Query: 343 GKAI-LCLINVAGLLMSG-SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL-------- 392
+ + + +++ G + + S D+T+R+W S C L H V+ +
Sbjct: 235 REWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD---CKVELRDHEHTVECIAWAPEAAA 291
Query: 393 TAVTE-------EGQNGVVSVFSGSLDGEIRAWQVSV 422
+A+ E +G + + SGS D IR W VSV
Sbjct: 292 SAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 59/228 (25%), Positives = 99/228 (43%)
Query: 211 HGDAVTGLA-VNNG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H V+ +A V G + S S D+++K+W + C+++ H + V V V G+++
Sbjct: 192 HDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFA 251
Query: 268 TGSADRKIRVW---AKP----FNEKRHAL--IATL-EKHKSAVNALALSDDGTVLFSG-- 315
T S D+ IRVW +K + H + IA E SA+N A +D+ G
Sbjct: 252 TCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPF 311
Query: 316 --ACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRG 371
+ R + + S ++T L GH + L G L+S S D+T+R+W
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLT--LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLR 369
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
+ C+ L H S+ + V SGS+D ++ W+
Sbjct: 370 NKR---CMKTLYAHQHFCTSI-----DFHKAHPYVISGSVDQTVKVWE 409
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 67/233 (28%), Positives = 107/233 (45%)
Query: 205 KKLWIEHGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K ++ H + L A N I S S DK++++W ++ + + ++ ED V VA+S
Sbjct: 351 KHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSI-EDGVTTVAMSP 409
Query: 263 GGT-VYTGSADRKIRVWAKPFNEKRHALIATLEK---HKSAVNALALSDDGTVLFSGACD 318
G V GS D+ +RVW + L+ LE HK +V ++A + +G L SG+ D
Sbjct: 410 DGLYVAAGSLDKTVRVW----DTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLD 465
Query: 319 RSILVWDREDSANHMVVTG-------ALRGHGKAIL--CLINVAGLLMSGSADRTVRIWQ 369
++I +W+ G GH +L CL +MSGS DR V+ W
Sbjct: 466 KTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Query: 370 RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS-GSLDGEIRAWQVS 421
+ +L+GH V S+ A + G ++F+ GS D R W+ S
Sbjct: 526 PITGN---AQMMLQGHKNSVISV-APSPTG-----NLFATGSGDMRARIWRYS 569
Score = 157 (60.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 53/200 (26%), Positives = 94/200 (47%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
DK +++W + HE + ++ + G + +GS D+ +R+W E + L
Sbjct: 337 DKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLW--DIAEGK--L 392
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVT-GALRGHGKAILC 348
+ TL + V +A+S DG + +G+ D+++ VWD + ++V GH ++
Sbjct: 393 VYTLSI-EDGVTTVAMSPDGLYVAAGSLDKTVRVWDT--TTGYLVERLENPDGHKDSVYS 449
Query: 349 LINVAG--LLMSGSADRTVRIW-------QRGSDGRFG-CLAVLEGHTKPVKSLTAVTEE 398
+ L+SGS D+T+++W Q S G+ G C EGH V S+ +T +
Sbjct: 450 VAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSV-CLTPD 508
Query: 399 GQNGVVSVFSGSLDGEIRAW 418
G V SGS D ++ W
Sbjct: 509 GH----WVMSGSKDRGVQFW 524
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 49/180 (27%), Positives = 88/180 (48%)
Query: 246 ESIKAHEDA-VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL 303
ES+ D + +V S G + TG+ D++IRVW +H H+ + +L
Sbjct: 309 ESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSG----HEQDIYSL 364
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMS-GSAD 362
+ +G + SG+ D+++ +WD + +V T ++ G + + + GL ++ GS D
Sbjct: 365 DFAGNGRYIASGSGDKTVRLWDIAEGK--LVYTLSIED-GVTTVAM-SPDGLYVAAGSLD 420
Query: 363 RTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSV 422
+TVR+W + L +GH V S+ A G+ V SGSLD I+ W++++
Sbjct: 421 KTVRVWDTTTGYLVERLENPDGHKDSVYSV-AFAPNGKELV----SGSLDKTIKLWELNL 475
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 49/193 (25%), Positives = 83/193 (43%)
Query: 235 KIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLE 294
++ R D+ + + H+ V V S G +R +++ + A++
Sbjct: 253 EVQRVLDVELVHHL-VHDSVVCCVRFSRDGKYLATGCNRSAQIFDVTLGQNV-AVLQDES 310
Query: 295 KHKSA---VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLIN 351
KS + ++ S DG L +GA D+ I VWD A + GH + I L +
Sbjct: 311 VDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWD---IATR-TIKHIFSGHEQDIYSL-D 365
Query: 352 VAG---LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
AG + SGS D+TVR+W L++ +G T A++ +G + V +
Sbjct: 366 FAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDGVTT-----VAMSPDG----LYVAA 416
Query: 409 GSLDGEIRAWQVS 421
GSLD +R W +
Sbjct: 417 GSLDKTVRVWDTT 429
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 162 (62.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 263 GGTVYTGSADRK-IRVWA---KPFNEKRHALIATLE-KHKSAVNALALSDDGTVLFSGAC 317
GG + D K +RVW+ +P ++ R TL+ H AV ++A S+DG L S +
Sbjct: 28 GGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFSNDGKCLVSASF 87
Query: 318 DRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGR 375
D S++V+ +ED L GH + C + L + S D++V WQ+ D
Sbjct: 88 DASVVVYQQEDG--EFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDED 145
Query: 376 FGCLAVLEGHTKPVKSL 392
F ++L+ HT+ VK +
Sbjct: 146 FSVSSILQPHTQDVKQV 162
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 408 SGSLDGEIRAWQVSV 422
S S DG IR W++ +
Sbjct: 323 SASDDGTIRLWELEI 337
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 162 (62.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 263 GGTVYTGSADRK-IRVWA---KPFNEKRHALIATLE-KHKSAVNALALSDDGTVLFSGAC 317
GG + D K +RVW+ +P ++ R TL+ H AV ++A S+DG L S +
Sbjct: 28 GGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFSNDGKCLVSASF 87
Query: 318 DRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGR 375
D S++V+ +ED L GH + C + L + S D++V WQ+ D
Sbjct: 88 DASVVVYQQEDG--EFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDED 145
Query: 376 FGCLAVLEGHTKPVKSL 392
F ++L+ HT+ VK +
Sbjct: 146 FSVSSILQPHTQDVKQV 162
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 408 SGSLDGEIRAWQVSV 422
S S DG IR W++ +
Sbjct: 323 SASDDGTIRLWELEI 337
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 64/210 (30%), Positives = 93/210 (44%)
Query: 222 NGLIYSV---SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS--AGGTVYTGSADRKIR 276
N LI S S D W+ LR L AH+ + A+A+ TGSAD I+
Sbjct: 56 NQLIVSAAPESEDSPAAEWKL--LRTLAG--AHQGWIRAIALDEITNKWYVTGSADSTIK 111
Query: 277 VWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHM-VV 335
+W + + ++L A L H + +L +S LFSG D+S+ WD E S +
Sbjct: 112 IW----DFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQ 167
Query: 336 TGALRGH--GKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT 393
+ GH G + L +L SG D VR+W S R + +L GHT + S+
Sbjct: 168 IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRS--RVEAMTLL-GHTNDITSIE 224
Query: 394 AVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
+ Q V + S+DG IR W + S
Sbjct: 225 TDYNDPQ-----VITSSMDGTIRLWDLRKS 249
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 220 VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVW 278
+ N + S D ++KIW + + H + ++ +S +++G D+ +R W
Sbjct: 96 ITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCW 155
Query: 279 -AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+ N I + H V ++ L + VLFSG D + VWD M
Sbjct: 156 DLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMT--- 212
Query: 338 ALRGHGKAILCL---INVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT 393
L GH I + N ++ S S D T+R+W R S ++ H+K ++S+
Sbjct: 213 -LLGHTNDITSIETDYNDPQVITS-SMDGTIRLWDLRKSKTEL----LITNHSKSIRSMK 266
Query: 394 AVTEEGQNGVVSVFSGSLDGEIRAW 418
+ +E + SG +GEI+ W
Sbjct: 267 SHPKEA-----TFVSGDSNGEIKQW 286
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 64/210 (30%), Positives = 93/210 (44%)
Query: 222 NGLIYSV---SWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS--AGGTVYTGSADRKIR 276
N LI S S D W+ LR L AH+ + A+A+ TGSAD I+
Sbjct: 56 NQLIVSAAPESEDSPAAEWKL--LRTLAG--AHQGWIRAIALDEITNKWYVTGSADSTIK 111
Query: 277 VWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHM-VV 335
+W + + ++L A L H + +L +S LFSG D+S+ WD E S +
Sbjct: 112 IW----DFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQ 167
Query: 336 TGALRGH--GKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT 393
+ GH G + L +L SG D VR+W S R + +L GHT + S+
Sbjct: 168 IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRS--RVEAMTLL-GHTNDITSIE 224
Query: 394 AVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
+ Q V + S+DG IR W + S
Sbjct: 225 TDYNDPQ-----VITSSMDGTIRLWDLRKS 249
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 220 VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVW 278
+ N + S D ++KIW + + H + ++ +S +++G D+ +R W
Sbjct: 96 ITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCW 155
Query: 279 -AKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+ N I + H V ++ L + VLFSG D + VWD M
Sbjct: 156 DLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMT--- 212
Query: 338 ALRGHGKAILCL---INVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT 393
L GH I + N ++ S S D T+R+W R S ++ H+K ++S+
Sbjct: 213 -LLGHTNDITSIETDYNDPQVITS-SMDGTIRLWDLRKSKTEL----LITNHSKSIRSMK 266
Query: 394 AVTEEGQNGVVSVFSGSLDGEIRAW 418
+ +E + SG +GEI+ W
Sbjct: 267 SHPKEA-----TFVSGDSNGEIKQW 286
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 156 (60.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 43/181 (23%), Positives = 88/181 (48%)
Query: 247 SIKAHEDAVNAVAVSAG--GTVYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAVNAL 303
+++ H V ++A SAG + + S D+ + W ++++ + + + + H V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INV-AGLLMSGSA 361
L+ DG S + D+++ +WD + G H ++ + I+ A +++SGS
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVG----HKSDVMSVDIDKKASMIISGSR 127
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAV-TEEGQNGVVSVFSGSLDGEIRAWQV 420
D+T+++W G+ CLA L GH V + V E+ + V++ S D ++AW +
Sbjct: 128 DKTIKVWT--IKGQ--CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL 183
Query: 421 S 421
+
Sbjct: 184 N 184
Score = 132 (51.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 211 HGDAVTGLAVNNG---LIYSVSWDKSLKIWRAS--DLRC---LESIKAHEDAVNAVAVSA 262
H VT LA + G L+ S S DK+L W+ + D + + S K H V ++A
Sbjct: 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 263 GGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
G + S D+ +R+W E + HKS V ++ + +++ SG+ D++I
Sbjct: 76 DGAYALSASWDKTLRLWDVATGETYQRFVG----HKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 322 LVWDREDSANHMVVTGALRGHG---KAILCLINVAG-----LLMSGSADRTVRIWQRGSD 373
VW + L GH + + N ++S D+ V+ W
Sbjct: 132 KVWTIKGQC-----LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN-- 184
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+F A GH + +LTA +G + +G DGEI W ++
Sbjct: 185 -QFQIEADFIGHNSNINTLTA----SPDGTLIASAGK-DGEIMLWNLA 226
Score = 119 (46.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 208 WIEHGDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG- 264
++ H V + ++ +I S S DK++K+W +CL ++ H D V+ V V
Sbjct: 103 FVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEK 161
Query: 265 ------TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACD 318
T+ + D+ ++ W N + + A H S +N L S DGT++ S D
Sbjct: 162 ADDDSVTIISAGNDKMVKAW----NLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217
Query: 319 RSILVWD 325
I++W+
Sbjct: 218 GEIMLWN 224
Score = 45 (20.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 405 SVFSGSLDGEIRAWQV 420
++F+G D IR WQV
Sbjct: 300 TLFAGYTDNVIRVWQV 315
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/161 (29%), Positives = 82/161 (50%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVY 267
H DAVT + + L+ S S DK++++W S +AH +V +V SA G ++
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLL 118
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
T S D+ I++W+ R +I TL +H + V S DG ++ S + DR++ +WD
Sbjct: 119 TASDDQSIKLWSV----HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDA- 173
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
S+ ++ T G + + + + + S+D TVR+W
Sbjct: 174 -SSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 50/167 (29%), Positives = 78/167 (46%)
Query: 211 HGDAVTGLAVN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H DA+T L + +G I S S D S+ +W H+DAV V S +
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76
Query: 269 GSA-DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
S+ D+ +R+W P + K +++ H +V ++ S DG L + + D+SI +W
Sbjct: 77 SSSRDKTVRLWV-P-SVKGESVL--FRAHTGSVRSVCFSADGQSLLTASDDQSIKLW--- 129
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAGLLM-SGSADRTVRIWQRGS 372
S + + LR H + C + G LM S S DRTV++W S
Sbjct: 130 -SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 292 TLEK----HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAIL 347
TLE+ H+ A+ +L S G + SG+ D S++VW+ + + TG H A+
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTG----HKDAVT 64
Query: 348 CL--INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVS 405
C+ A LL S S D+TVR+W G + HT V+S+ + +GQ S
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLWVPSVKGES---VLFRAHTGSVRSV-CFSADGQ----S 116
Query: 406 VFSGSLDGEIRAWQV 420
+ + S D I+ W V
Sbjct: 117 LLTASDDQSIKLWSV 131
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 44/178 (24%), Positives = 82/178 (46%)
Query: 199 TVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
T+R H W+ + + L+ SVS D+++K+W AS + + + + V
Sbjct: 139 TLREHNN--WVR----CARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV 192
Query: 259 AVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGAC 317
T + T S+D +RVW + + H L+ + H +AVNAL+ G L + +
Sbjct: 193 DFHPSSTCIATASSDNTVRVW----DIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASS 248
Query: 318 DRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSD 373
D ++ + D + ++ T L GH + C+ + +G S +D+ V +W+ D
Sbjct: 249 DSTLKILDLLEG--RLLYT--LHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFD 302
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/221 (26%), Positives = 101/221 (45%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCL--ESIKAHEDAVNAVAVSAGGTVY 267
+HGD V+ A ++ L+ + S DK+++++ SD L +K H AV+ + S G V
Sbjct: 10 DHGDDVSCCAFSSTLLATCSLDKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSPSGHVL 69
Query: 268 TG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
S D +W+ H L + S V S D T L SGA D S+++W+
Sbjct: 70 ASCSTDGTTVLWSA---HSGHTLTVLEQPGGSPVRVCCFSPDSTYLASGAADGSVVLWNA 126
Query: 327 EDSANHMVVTGALRGHGKAILCLINV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + G+++ + C + GLL++GS+ + +W D R CL + H
Sbjct: 127 H--SYKLYRCGSVKD-SSLVACAFSPDGGLLVTGSSGGDLTVW----DDRMRCLHSEKAH 179
Query: 386 TKPVKSLTAVTEE---GQNGV--VSVFSGSLDGEIRAWQVS 421
+ + ++ G++G+ + S D EI+ W VS
Sbjct: 180 DLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVS 220
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/165 (29%), Positives = 80/165 (48%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA----GGT----VYTGSA- 271
+ GL+ + S L +W +RCL S KAH+ + + S+ GG +Y ++
Sbjct: 150 DGGLLVTGSSGGDLTVWD-DRMRCLHSEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASC 208
Query: 272 --DRKIRVWAKPFNEKRHALI---ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
D +I++W F + +TL H + V A A S DG +L SG+ D+S++++D
Sbjct: 209 GQDCEIKLWVVSFTRVLGFELKYRSTLSGHCAPVLACAFSHDGQMLASGSVDKSVIIYDI 268
Query: 327 EDSANHMVVTGALRGHGKAIL-CLINVAGLLMS-GSADRTVRIWQ 369
+ V L H + + C LL++ GS D+TV IWQ
Sbjct: 269 GTQS----VLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ 309
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 49/187 (26%), Positives = 84/187 (44%)
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWA-KPFNEKRHALIATLEKHKSAV 300
++ + ++ H D V+ A S+ + T S D+ IR+++ F E H+ L+ H AV
Sbjct: 2 VKLIHTLADHGDDVSCCAFSST-LLATCSLDKTIRLYSLSDFAELPHS---PLKFHTYAV 57
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGS 360
+ + S G VL S + D + ++W S + + V G + C + L SG+
Sbjct: 58 HCCSFSPSGHVLASCSTDGTTVLWSAH-SGHTLTVLEQPGGSPVRVCCFSPDSTYLASGA 116
Query: 361 ADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
AD +V +W S + C G K SL A G++ +GS G++ W
Sbjct: 117 ADGSVVLWNAHSYKLYRC-----GSVKD-SSLVACAFSPDGGLL--VTGSSGGDLTVWDD 168
Query: 421 SVSCPNS 427
+ C +S
Sbjct: 169 RMRCLHS 175
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 163 (62.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/221 (26%), Positives = 99/221 (44%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ + D C+ +++ HE+ V +VA +G + T S D+ + VW
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ L H V + +L S + D ++ ++ E+ + V L GH
Sbjct: 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHE 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIWQR------------GSDGRFGCLAVLEG-HTKP 388
+ L + +G L S S DRTVRIW++ GSD + C+ L G H++
Sbjct: 195 STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSP 429
+ + G ++ G D IR +Q PNS P
Sbjct: 255 IYDIAWCQ---LTGALATACG--DDAIRVFQED---PNSDP 287
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 245 LESIKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
L + AH D+ +A + GT+ DR+IR+W + + + E H+ V
Sbjct: 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS-EGHQRTVRK 66
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGS 360
+A S G L S + D + +W + V T L GH + + LL + S
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTT--LEGHENEVKSVAWAPSGNLLATCS 124
Query: 361 ADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
D++V +W+ + + C++VL HT+ VK
Sbjct: 125 RDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 163 (62.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 52/185 (28%), Positives = 86/185 (46%)
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALIATLEKHKSAV 300
L L+++ H V + A GG ++ D+ IRVW K ++ A + H +
Sbjct: 4 LELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTI 63
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAG-LLMS 358
LA S G L S + D ++ VWD++ + L GH + + + +G LL +
Sbjct: 64 RELAWSCCGHYLASASFDTTVAVWDKK--SGEFECNATLEGHDNEVKSVTWSRSGNLLAT 121
Query: 359 GSADRTVRIWQ----RGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
S D++V IW+ + + C+AVL GHT+ VK V Q +++ S S D
Sbjct: 122 CSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKK---VCWHPQEDLLA--SASYDNT 176
Query: 415 IRAWQ 419
IR ++
Sbjct: 177 IRMYR 181
Score = 161 (61.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 62/223 (27%), Positives = 101/223 (45%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDL-RCL-ESI--KAHEDAVNAVAVSAGG 264
H V A + G L S DK++++W SD R + +++ H + +A S G
Sbjct: 13 HAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWSCCG 72
Query: 265 TVYTGSA--DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSIL 322
Y SA D + VW K E ATLE H + V ++ S G +L + + D+S+
Sbjct: 73 H-YLASASFDTTVAVWDKKSGE--FECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVW 129
Query: 323 VWD---REDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRG-SDGRF 376
+W+ D + L GH + + +C LL S S D T+R++++ +D +
Sbjct: 130 IWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSEW 189
Query: 377 GCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
L LE H+ V S++ GQ + S S D ++ WQ
Sbjct: 190 EMLEPLESHSSTVWSIS-FDATGQR----LASCSEDTTVKVWQ 227
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/185 (31%), Positives = 89/185 (48%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S++ H +AV +VA S G + +GS D +R W E H T + H+ V
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS-TETPHF---TCKGHRHWVL 160
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL------INV-AG 354
+++ S DG L SG + +L+WD + + V L GH K I L +N
Sbjct: 161 SISWSPDGKKLASGCKNGQVLLWD---PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR 217
Query: 355 LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
+ S S D +VR+W + GR C +L GHT+ V L G +G++ +S S D
Sbjct: 218 YVASSSKDGSVRVWDTTA-GR--CERILTGHTQSVTCL----RWGGDGLL--YSASQDRT 268
Query: 415 IRAWQ 419
I+ W+
Sbjct: 269 IKVWR 273
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 56/214 (26%), Positives = 102/214 (47%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 245 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 304
Query: 270 SAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ + + V A+ + + +L E+ S N L L SG+ D ++ +W +
Sbjct: 305 AFEPAEATVNAQ---DLQGSLKELKERASSRYN-LVRGQGPERLVSGSDDFTLFLWSPAE 360
Query: 329 SANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
+ + GH I + + ++ S S D+++++W G G++ LA L GH
Sbjct: 361 DKKPLA---RMTGHQALINQVLFSPDSRIVASASFDKSIKLWD-GRTGKY--LASLRGHV 414
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 415 AAVYQI-AWSADSR----LLVSGSSDSTLKVWDV 443
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 77/290 (26%), Positives = 117/290 (40%)
Query: 140 SSSGSVKSVTFCDGKIFTAHQDCK-IRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYV 198
S SG +V F D T H CK R W + + P++ +
Sbjct: 131 SGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGL 189
Query: 199 TVRR----HKKKLWIEHGDAVTGLAVNNGLIY--SVSWDKSLKIWRASDLRCLESIKAHE 252
V R H K WI G + L +N Y S S D S+++W + RC + H
Sbjct: 190 QVGRTLTGHSK--WIT-GLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHT 246
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRH--ALIATLEKHKSAVNALALSDDGT 310
+V + G +Y+ S DR I+VW + H L TL+ H VN +ALS D
Sbjct: 247 QSVTCLRWGGDGLLYSASQDRTIKVW------RAHDGVLCRTLQGHGHWVNTMALSTD-Y 299
Query: 311 VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIW 368
L +GA + + + +D + L+ + L+ G L+SGS D T+ +W
Sbjct: 300 ALRTGAFEPAEATVNAQDLQGSLK---ELKERASSRYNLVRGQGPERLVSGSDDFTLFLW 356
Query: 369 QRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
D + LA + GH + V + +V+ S S D I+ W
Sbjct: 357 SPAEDKK--PLARMTGHQALINQ---VLFSPDSRIVA--SASFDKSIKLW 399
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
++ S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 386 IVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 441
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L L H V A+ S DG + SG D+ + +W R
Sbjct: 442 DVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +W A D + L + H+ +N V S + + S D+ I++W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW---- 399
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +A+L H +AV +A S D +L SG+ D ++ VWD + A + L GH
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK--AQKLATD--LPGH 455
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + + G + SG D+ +RIW+R
Sbjct: 456 ADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 60/185 (32%), Positives = 87/185 (47%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S++ H +AV +VA S G + +GS D +R W E H T + H+ V
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS-TETPHF---TCKGHRHWVL 162
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL------INV-AG 354
+++ S DG L SG + IL+WD V L GH K I L +N
Sbjct: 163 SISWSPDGKKLASGCKNGQILLWDPSTGTQ---VGRTLTGHSKWITGLSWEPLHMNPECR 219
Query: 355 LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
+ S S D +VR+W + GR C +L GHT+ V L G +G++ +S S D
Sbjct: 220 YVASSSKDGSVRVWDTTA-GR--CERILTGHTQSVTCL----RWGGDGLL--YSASQDRT 270
Query: 415 IRAWQ 419
I+ W+
Sbjct: 271 IKVWR 275
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 56/214 (26%), Positives = 102/214 (47%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 247 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 306
Query: 270 SAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ + + V A+ + + +L E+ S N L L SG+ D ++ +W +
Sbjct: 307 AFEPAEATVNAQ---DLQGSLKELKERASSRYN-LVRGQGPERLVSGSDDFTLFLWSPAE 362
Query: 329 SANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
+ + GH I + + ++ S S D+++++W G G++ LA L GH
Sbjct: 363 DKKPLA---RMTGHQALINQVLFSPDSRIVASASFDKSIKLWD-GRTGKY--LASLRGHV 416
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 417 AAVYQI-AWSADSR----LLVSGSSDSTLKVWDV 445
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 77/290 (26%), Positives = 116/290 (40%)
Query: 140 SSSGSVKSVTFCDGKIFTAHQDCK-IRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYV 198
S SG +V F D T H CK R W + + P++
Sbjct: 133 SGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGT 191
Query: 199 TVRR----HKKKLWIEHGDAVTGLAVNNGLIY--SVSWDKSLKIWRASDLRCLESIKAHE 252
V R H K WI G + L +N Y S S D S+++W + RC + H
Sbjct: 192 QVGRTLTGHSK--WIT-GLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHT 248
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRH--ALIATLEKHKSAVNALALSDDGT 310
+V + G +Y+ S DR I+VW + H L TL+ H VN +ALS D
Sbjct: 249 QSVTCLRWGGDGLLYSASQDRTIKVW------RAHDGVLCRTLQGHGHWVNTMALSTD-Y 301
Query: 311 VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG--LLMSGSADRTVRIW 368
L +GA + + + +D + L+ + L+ G L+SGS D T+ +W
Sbjct: 302 ALRTGAFEPAEATVNAQDLQGSLK---ELKERASSRYNLVRGQGPERLVSGSDDFTLFLW 358
Query: 369 QRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
D + LA + GH + V + +V+ S S D I+ W
Sbjct: 359 SPAEDKK--PLARMTGHQALINQ---VLFSPDSRIVA--SASFDKSIKLW 401
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +W A D + L + H+ +N V S + + S D+ I++W
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW---- 401
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +A+L H +AV +A S D +L SG+ D ++ VWD +T L GH
Sbjct: 402 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD----VKAQKLTTDLPGH 457
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + + G + SG D+ +RIW+R
Sbjct: 458 ADEVYAVDWSPDGQRVASGGKDKCLRIWRR 487
Score = 135 (52.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
++ S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 388 IVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 443
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L L H V A+ S DG + SG D+ + +W R
Sbjct: 444 DVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 487
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 49/162 (30%), Positives = 80/162 (49%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--VYTGSADRKIRVW 278
N L SVS D++LKIW + D R L +IKAH+ + + V TGS D+ IR+W
Sbjct: 159 NAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIW 218
Query: 279 AKPFNEKRHALIATLEKHKSAVNALALSDDG-TVLFSGACDRSILVWDREDSANHMVVTG 337
+ ++ + L H AV + S ++L S + D S++VWDR + ++
Sbjct: 219 DIRYPDRPTTI---LRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIAR- 274
Query: 338 ALRGHGKAILCL---INVAGLLMSGSADRTVRIWQRGSDGRF 376
+ H + ++ L + + G + S S D V +W G G+F
Sbjct: 275 -MDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGRPGQF 315
Score = 145 (56.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 225 IYSVSWDKSLKIWRA---SDLRCLESIKAHEDAVNAVA--VSAGGTVYTGSADRKIRVWA 279
+ S S D S+KIW S R ++S + H V +V + T TGS D+ I++W
Sbjct: 74 VASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIW- 132
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGAC-DRSILVWDREDSANHMVVTGA 338
N + + T +H+ + + S LF+ DR++ +WD D N + T
Sbjct: 133 ---NPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRD--NRSLNT-- 185
Query: 339 LRGHGKAIL-CLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
++ H IL C N +++GS D+T+RIW R +L GHT V+ +
Sbjct: 186 IKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDR--PTTILRGHTYAVRRI 240
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/169 (26%), Positives = 78/169 (46%)
Query: 229 SWDKSLKIWRASDLRCLESIKAHEDAV-NAVAVSAGGTVYTG-SADRKIRVWAKPFNEKR 286
SWD+S+KIW R L++ + H + +A+ ++ S DR +++W N
Sbjct: 124 SWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSL 183
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA- 345
+ + A H+ +D V+ +G+ D++I +WD + LRGH A
Sbjct: 184 NTIKA--HDHEILTCDWNKYNDKEVV-TGSVDKTIRIWDIRYPDRPTTI---LRGHTYAV 237
Query: 346 --ILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
I C + +L S S D +V +W R + + +A ++ HT+ V L
Sbjct: 238 RRIKCSPHSESMLASCSYDMSVIVWDRARE-QDPIIARMDHHTEFVVGL 285
>TAIR|locus:2087921 [details] [associations]
symbol:AT3G18860 "AT3G18860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AP002039 OMA:VSECCRF UniGene:At.21618
UniGene:At.71275 EMBL:AF410311 IPI:IPI00544863 RefSeq:NP_566620.1
ProteinModelPortal:Q9LHN3 SMR:Q9LHN3 PaxDb:Q9LHN3 PRIDE:Q9LHN3
EnsemblPlants:AT3G18860.1 GeneID:821419 KEGG:ath:AT3G18860
TAIR:At3g18860 InParanoid:Q9LHN3 ProtClustDB:CLSN2688542
Genevestigator:Q9LHN3 Uniprot:Q9LHN3
Length = 760
Score = 168 (64.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 52/162 (32%), Positives = 79/162 (48%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H VTG+A++N I S S D++LK WR L +ES AH+ + AV G + +GS
Sbjct: 112 HQMQVTGVAIDNEDIVSSSVDQTLKRWRNGQL--VESWDAHQSPIQAVIRLPSGELVSGS 169
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
+D +++W K + TL H V LA+ D L S + D SI +W
Sbjct: 170 SDASLKLW------KGKTSLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWALSGEV 222
Query: 331 NHMVVTGALRGHGKAILCL-INVAGLLMSGSADRTVRIWQRG 371
+V GH + + + +GL++S S DR +IW+ G
Sbjct: 223 LLEMV-----GHTSLVYSVDAHSSGLIVSASEDRHAKIWKDG 259
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 49/188 (26%), Positives = 87/188 (46%)
Query: 242 LRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWA-KPFNEKRHALIATLEKHKSAV 300
LRC + H+D V + V + T S DR IRVW+ P +++++ L H S V
Sbjct: 12 LRC--ELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFV 69
Query: 301 NALAL---SDDGTV--LFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL 355
LA +D+ L SG+ D + VW+ + N + T L+GH + +
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGEN--IQT--LKGHQMQVTGVAIDNED 125
Query: 356 LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
++S S D+T++ W+ G + + H P++++ + G+ + SGS D +
Sbjct: 126 IVSSSVDQTLKRWRNGQ-----LVESWDAHQSPIQAVIRLPS-GE-----LVSGSSDASL 174
Query: 416 RAWQVSVS 423
+ W+ S
Sbjct: 175 KLWKGKTS 182
Score = 45 (20.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 145 VKSVTFC-DGKIFTAHQDCKIRVW 167
V+ + C D I T+ +D IRVW
Sbjct: 23 VRGICVCNDENIATSSRDRTIRVW 46
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/225 (26%), Positives = 101/225 (44%)
Query: 211 HGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVY 267
H DA+T + ++N + S S D LKIW + H+DAV V S G V
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVA 78
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D+ + +W P + K + + + H + V ++ S DG L + + D++I VW
Sbjct: 79 SGSRDKTVCLWV-P-SVKGESTV--FKAHTATVRSVHFSSDGQSLVTASDDKTIKVW--- 131
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + +L H + C + G L+ S S D+TV++W + S G
Sbjct: 132 -TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 386 TKPVK---SLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNS 427
V+ S T + G + V V+ ++ ++ +QV + NS
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNS 235
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
LI S S DK++K+W + C+ S H N V GT + D+ ++VW
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRM 219
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
N L+ + H +AVN+L+ G L + + D ++ + D + ++ T L GH
Sbjct: 220 NR----LLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG--RLLYT--LHGH 271
Query: 343 -GKAILCLINVAG-LLMSGSADRTVRIWQ 369
G A + G SG +D V +W+
Sbjct: 272 QGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 132 (51.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 68/269 (25%), Positives = 106/269 (39%)
Query: 95 LGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWT-SINTFNDN-DSSSGSVKSVTFC- 151
+GHK + C+ + AS D+T W S+ + + + +V+SV F
Sbjct: 59 VGHKDAVMCVQFSPSGHLVASGSR----DKTVCLWVPSVKGESTVFKAHTATVRSVHFSS 114
Query: 152 DGK-IFTAHQDCKIRVWQXXXXXXXXXXXXXXXVN-DRLLRFMLPNSYVTVRRHKK--KL 207
DG+ + TA D I+VW +N R RF + K KL
Sbjct: 115 DGQSLVTASDDKTIKVW--TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKL 172
Query: 208 W-----------IEHGDAVTGLAVN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDA 254
W EHG + + +G I + DK++K+W R L+ + H A
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA 232
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
VN+++ G + T S D +++ E R L+ TL H+ +A S G
Sbjct: 233 VNSLSFHPSGNYLITASNDSTLKIL--DLLEGR--LLYTLHGHQGPATCVAFSRTGDFFA 288
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGH 342
SG D ++VW SA G L+ H
Sbjct: 289 SGGSDEQVMVWKTNFSAADY--DGVLKTH 315
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 51/185 (27%), Positives = 84/185 (45%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVK 390
PV+
Sbjct: 231 PGPVR 235
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 64/232 (27%), Positives = 103/232 (44%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V +AV+ N + S D ++K+W + ++ H A+ + VS+ ++
Sbjct: 206 HTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLF 265
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+ D K+ W N++ + H+ V ++AL VLFSG D + VWD
Sbjct: 266 SVGEDNKVLCWDLESNKQ----VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMR 321
Query: 328 DSANHMVVTGALRGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
AN ++GH IL L N ++SGS D TV++W + G A L H
Sbjct: 322 TRANIF----EMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLAT-GTSA--ATLTNH 374
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPL-NLQKWN 436
K V+S+ +E S +G+ D I+ W+ CP+ S + NL N
Sbjct: 375 KKGVRSMVIHEKE-----YSFATGAADN-IKQWK----CPDGSFIKNLSGHN 416
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 251 HEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
HED V +VA S G V D+ IR+W K +K + H+ + +L S G
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKE-GDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 310 TVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-NVAG-LLMSGSADRTVRI 367
T L S + D + +WD++ + L GH + + +V+G LL + D++V I
Sbjct: 63 TFLASASFDATTCIWDQK--SGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWI 120
Query: 368 WQRGSDGRFGCLAVLEGHTKPVKSL 392
W+ D + C +V+ HT+ VK +
Sbjct: 121 WEVQEDDEYECASVIHSHTQDVKKV 145
Score = 122 (48.0 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 227 SVSWDKSLKIW--RASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
S S+D + IW ++ + C +++ HE+ V +V S G++ T D+ + +W +
Sbjct: 67 SASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQED 126
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
++ + + + H V + +L S + D +I ++ +ED + L GH
Sbjct: 127 DE-YECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLY-KEDE-DDWSCCDTLEGHE 183
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
+ + + +G ++S S D+TVRIW+ G + V HTK
Sbjct: 184 STVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTK 229
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 162 (62.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 64/219 (29%), Positives = 101/219 (46%)
Query: 224 LIYSVSWDKSLKIW-RASDLRCLESI--KAHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D+S++IW R D +S+ + H+ V VA S G + + S D +W
Sbjct: 30 LLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR--EDSANHMVVTG 337
K N+ + TLE H++ V ++A + G +L + + D+S+ VW+ E+ +
Sbjct: 90 K--NKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVP 147
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
K +L + LL S S D TV++++ D + C A LEGH V SL A
Sbjct: 148 YKPQSMKKVLWHPSQE-LLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSL-AFDP 204
Query: 398 EGQNGVVSVFSGSLDGEIRAW-------QVSVSCPNSSP 429
GQ + S S D +R W + V+C S P
Sbjct: 205 SGQR----LASCSDDRTVRIWRQYLPGNEQGVACNGSDP 239
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 41/130 (31%), Positives = 59/130 (45%)
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL-RGHGKAI--LCLINVAGLLMSG 359
LA + GT+L S DRS+ +W RE + + L GH + + + L S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDS--WICKSVLCEGHQRTVRKVAWSPCGNYLASA 79
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
S D T IW++ D F C+ LEGH VKS+ A G N + + S D + W+
Sbjct: 80 SFDATTCIWKKNKDD-FECVTTLEGHENEVKSV-AWAPSG-NLLATC---SRDKSVWVWE 133
Query: 420 VSVSCPNSSP 429
+V S P
Sbjct: 134 GTVENQPSDP 143
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 53/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W EK+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDW---EKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHDKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCVNFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 51/183 (27%), Positives = 81/183 (44%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHDKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINV---AGLLMSGSADRTV 365
L SGA DR + +WD ++ V T L GH + + C +N ++++GS D TV
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSC-VNFHPELPIIITGSEDGTV 253
Query: 366 RIW 368
RIW
Sbjct: 254 RIW 256
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDG-EIRAWQ 419
PV+S+ +G ++SG D + W+
Sbjct: 231 PGPVRSVL-FNPDG----CCLYSGCQDSLRVYGWE 260
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDG-EIRAWQ 419
PV+S+ +G ++SG D + W+
Sbjct: 231 PGPVRSVL-FNPDG----CCLYSGCQDSLRVYGWE 260
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDG-EIRAWQ 419
PV+S+ +G ++SG D + W+
Sbjct: 231 PGPVRSVL-FNPDG----CCLYSGCQDSLRVYGWE 260
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDG-EIRAWQ 419
PV+S+ +G ++SG D + W+
Sbjct: 231 PGPVRSVL-FNPDG----CCLYSGCQDSLRVYGWE 260
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 66/226 (29%), Positives = 101/226 (44%)
Query: 203 HKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDL-RCLESIKAHEDAVNAVAVS 261
H ++ G + AV + + + I+R + RC S++ H +AV +VA S
Sbjct: 65 HDAEIVSSLGKTLESQAVETEKVLDIIYQPQA-IFRVRAVTRCTSSLEGHSEAVISVAFS 123
Query: 262 AGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRS 320
G + +GS D +R W E H T + H+ V +++ S DG L SG +
Sbjct: 124 PTGKYLASGSGDTTVRFWDLS-TETPHF---TCKGHRHWVLSISWSPDGRKLASGCKNGQ 179
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCL----INV---AGLLMSGSADRTVRIWQRGSD 373
IL+WD V L GH K I L ++ + S S D +VRIW +
Sbjct: 180 ILLWDPSTGKQ---VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTA- 235
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
GR C +L GHT+ V L G +G++ +S S D I+ W+
Sbjct: 236 GR--CERILTGHTQSVTCL----RWGGDGLL--YSASQDRTIKVWR 273
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 245 HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 304
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
+ + P + + +L E+ S N L L SG+ D ++ +W +
Sbjct: 305 AFE-PAEASVNP-QDLQGSLQELKERALSRYN-LVRGQGPERLVSGSDDFTLFLWSPAED 361
Query: 330 ANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
+ + GH I + + ++ S S D+++++W G G++ LA L GH
Sbjct: 362 KKPLT---RMTGHQALINQVLFSPDSRIVASASFDKSIKLWD-GRTGKY--LASLRGHVA 415
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 416 AVYQI-AWSADSR----LLVSGSSDSTLKVWDV 443
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 82/293 (27%), Positives = 117/293 (39%)
Query: 140 SSSGSVKSVTFCDGKIFTAHQDCK-IRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYV 198
S SG +V F D T H CK R W + + P++
Sbjct: 131 SGSGDT-TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGK 189
Query: 199 TVRR----HKKKLWIEHGDAVTGLAVNNGLIY--SVSWDKSLKIWRASDLRCLESIKAHE 252
V R H K WI G + L N Y S S D S++IW + RC + H
Sbjct: 190 QVGRTLAGHSK--WIT-GLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHT 246
Query: 253 DAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRH--ALIATLEKHKSAVNALALSDDGT 310
+V + G +Y+ S DR I+VW + H L TL+ H VN +ALS D
Sbjct: 247 QSVTCLRWGGDGLLYSASQDRTIKVW------RAHDGVLCRTLQGHGHWVNTMALSTD-Y 299
Query: 311 VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLIN-VAGL----LMSGSADRTV 365
L +GA + + E S N + G+L+ + L N V G L+SGS D T+
Sbjct: 300 ALRTGAFEPA------EASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTL 353
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+W D + L + GH + V + +V+ S S D I+ W
Sbjct: 354 FLWSPAEDKK--PLTRMTGHQALINQ---VLFSPDSRIVA--SASFDKSIKLW 399
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
++ S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 386 IVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 441
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L L H V A+ S DG + SG D+ + +W R
Sbjct: 442 DVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +W A D + L + H+ +N V S + + S D+ I++W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLW---- 399
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +A+L H +AV +A S D +L SG+ D ++ VWD + A + + L GH
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK--AQKLAMD--LPGH 455
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + + G + SG D+ +RIW+R
Sbjct: 456 ADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 162 (62.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 61/197 (30%), Positives = 85/197 (43%)
Query: 205 KKLWIEHGDAVTGLA-VNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS 261
KK+ EH V G LI S S D + K+W D+R +I+ D AVS
Sbjct: 132 KKM-AEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW---DMRQRGAIQTFPDKYQITAVS 187
Query: 262 ---AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACD 318
A ++TG D ++VW K A + TLE H+ + ++LS DG+ L + D
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDL---RKGEATM-TLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 319 RSILVWDREDSANHMVVTGALRGHG----KAIL-CLINVAGL-LMSGSADRTVRIWQRGS 372
+ VWD A GH K +L C + G + +GS+DR V IW S
Sbjct: 244 NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTS 303
Query: 373 DGRFGCLAVLEGHTKPV 389
+ L GHT V
Sbjct: 304 RRT---IYKLPGHTGSV 317
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/219 (23%), Positives = 94/219 (42%)
Query: 211 HGDAVTGLA-VNNGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT--V 266
H +A+ L ++G I S S DK+++ W + ++ + H VN+ + G +
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 154
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD- 325
+GS D ++W +R A+ +K++ + A++ SD +F+G D + VWD
Sbjct: 155 ISGSDDGTAKLWDM---RQRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDL 209
Query: 326 REDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQ-RGSDGRFGCLAVL 382
R+ A T L GH I + L L++ D + +W R + C+ +
Sbjct: 210 RKGEA-----TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIF 264
Query: 383 EGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
EGH + +G V +GS D + W +
Sbjct: 265 EGHQHNFEKNLLKCSWSPDGT-KVTAGSSDRMVHIWDTT 302
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/189 (25%), Positives = 89/189 (47%)
Query: 238 RASDLRC-LESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEK 295
R S L + + H AV + + GT + +GS DR+I +W + + ++ ++ L+
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMV--LKG 94
Query: 296 HKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG 354
HK+A+ L + DG+ + S + D+++ WD E + H + C G
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQ----IKKMAEHSSFVNSCCPTRRG 150
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK-SLTAVTEEGQNGVVSVFSGSL 411
L++SGS D T ++W G A+ T P K +TAV+ + +F+G +
Sbjct: 151 PPLIISGSDDGTAKLWDMRQRG-----AI---QTFPDKYQITAVSFS--DAADKIFTGGV 200
Query: 412 DGEIRAWQV 420
D +++ W +
Sbjct: 201 DNDVKVWDL 209
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVA-VSAGGTV 266
H AV + N LI S S D+ + +WR D + +K H++A+ + S G +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQI 111
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT-VLFSGACDRSILVWD 325
+ S D+ +R W ++ I + +H S VN+ + G ++ SG+ D + +WD
Sbjct: 112 VSASPDKTVRAWDVETGKQ----IKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 326 -REDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFG-CLAVLE 383
R+ A + T + A+ + A + +G D V++W D R G LE
Sbjct: 168 MRQRGA---IQTFPDKYQITAV-SFSDAADKIFTGGVDNDVKVW----DLRKGEATMTLE 219
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSCPNS 427
GH + ++ ++ +G + + +D ++ W + P +
Sbjct: 220 GHQDTITGMS-LSPDGSY----LLTNGMDNKLCVWDMRPYAPQN 258
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 64/242 (26%), Positives = 106/242 (43%)
Query: 198 VTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKS-LKIWRASDLRCLESIKAHEDA 254
VT K + + H V+ L + +G + + D + +W + C+ S+ H
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 255 VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLF 313
V +V ++ + GS IRVW + + ++ TL HK+ + +L G +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVW----DLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 314 SGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMSGSAD-RTVRIWQRG 371
SG+ D +I +WD RGH +A+ CL + G ++ +AD TV++W
Sbjct: 122 SGSQDTNIKLWDIRRKG----CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 372 SDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS----VSCPNS 427
+ G+ ++ GHT PV V E N + + SGS D IR W + VSC
Sbjct: 178 A-GKM--MSEFPGHTGPVN----VVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 428 SP 429
P
Sbjct: 230 EP 231
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
H V + +N LI + S S+++W + L ++ H+ + ++ G V
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D I++W + +R + H AV L S DG L S A D ++ +WD
Sbjct: 122 SGSQDTNIKLW----DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL- 176
Query: 328 DSANHMVVTGALRGH-GKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+A M+ GH G + + LL SGS+DRT+R W +F ++ +EG
Sbjct: 177 -TAGKMM--SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE---KFQVVSCIEGE 230
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDG-EIRAWQ 419
PV+S+ +G ++SG D + W+
Sbjct: 231 PGPVRSIL-FNPDG----CCLYSGCQDSLRVYGWE 260
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 60/215 (27%), Positives = 102/215 (47%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +AVT + GLIY+ S D+++K+WRA+D + H VN +A+S + TG
Sbjct: 250 HTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTG 309
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL--ALSDDGTVLFSGACDRSILVWDRE 327
K K H ++T E +SA+ D+ L S + D ++ +W
Sbjct: 310 PFHP-----VKD-RSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLW--R 361
Query: 328 DSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
++ N V + GH + + L+ S S D++VR+W R SDG++ +A GH
Sbjct: 362 NNQNKCVER--MTGHQNVVNDVKYSPDVKLIASASFDKSVRLW-RASDGQY--MATFRGH 416
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ V ++ A + + + + SGS D ++ W V
Sbjct: 417 VQAVYTV-AWSADSR----LIVSGSKDSTLKVWSV 446
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/188 (31%), Positives = 82/188 (43%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S+ H +AV ++ S G + +GS D +R+W E H T HK V
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLN-TETPHF---TCTGHKQWVL 165
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI-------NVAG 354
++ + DG L SG SI++WD E L GH K I CL
Sbjct: 166 CVSWAPDGKRLASGCKAGSIIIWDPETGQQK---GRPLSGHKKHINCLAWEPYHRDPECR 222
Query: 355 LLMSGSADRTVRIWQRGSDGRFG-CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDG 413
L S S D RIW D + G CL + GHT V TAV G G++ ++ S D
Sbjct: 223 KLASASGDGDCRIW----DVKLGQCLMNIAGHTNAV---TAVRWGGA-GLI--YTSSKDR 272
Query: 414 EIRAWQVS 421
++ W+ +
Sbjct: 273 TVKMWRAA 280
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/199 (29%), Positives = 87/199 (43%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR 286
S S D +IW +CL +I H +AV AV G +YT S DR +++W
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADG--- 282
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS----ANHMVVTGALRGH 342
L T H VN +ALS D VL +G V DR S + + AL+ +
Sbjct: 283 -ILCRTFSGHAHWVNNIALSTD-YVLRTGPFHP---VKDRSKSHLSLSTEELQESALKRY 337
Query: 343 GKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNG 402
+A+ C V L+ S S D T+ +W R + + C+ + GH V + +
Sbjct: 338 -QAV-CPDEVESLV-SCSDDNTLYLW-RNNQNK--CVERMTGHQNVVNDVKYSPD----- 386
Query: 403 VVSVFSGSLDGEIRAWQVS 421
V + S S D +R W+ S
Sbjct: 387 VKLIASASFDKSVRLWRAS 405
Score = 140 (54.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAG-GTVYTGSADRKIRVWAKPFN 283
+ S S D +L +WR + +C+E + H++ VN V S + + S D+ +R+W
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
+ +AT H AV +A S D ++ SG+ D ++ VW S + L GH
Sbjct: 408 Q----YMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW----SVQTKKLAQELPGHA 459
Query: 344 KAILCL--INVAGLLMSGSADRTVRIW 368
+ + + SG D+ +++W
Sbjct: 460 DEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 139 (54.0 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
LI S S+DKS+++WRASD + + + + H AV VA SA + +GS D ++VW+
Sbjct: 389 LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWS--V 446
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
K+ L L H V + + DG+ + SG D+ I +W
Sbjct: 447 QTKK--LAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 37 (18.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 153 GKIFTAHQDCKIRVWQ 168
G I+T+ +D +++W+
Sbjct: 263 GLIYTSSKDRTVKMWR 278
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 55/177 (31%), Positives = 86/177 (48%)
Query: 246 ESIKAHEDA-VNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL 303
ES K D V +VA S G + TG D++IR+W +KR + L H+ + +L
Sbjct: 339 ESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIW--DIAQKR--VYRLLTGHEQEIYSL 394
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADR 363
S DG L SG+ DR++ +WD E +++ G + + +GS D+
Sbjct: 395 DFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILH---TDDGVTTVMFSPDGQFIAAGSLDK 451
Query: 364 TVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+RIW S G + L GH + V S+ A + +G+ V SGSLD I+ W++
Sbjct: 452 VIRIWT--SSGTL--VEQLHGHEESVYSV-AFSPDGKYLV----SGSLDNTIKLWEL 499
Score = 165 (63.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 55/182 (30%), Positives = 91/182 (50%)
Query: 200 VRRHKKKLWIEHGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNA 257
V ++KL + D VT + + +G I + S DK ++IW +S +E + HE++V +
Sbjct: 417 VEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGT-LVEQLHGHEESVYS 475
Query: 258 VAVSAGGT-VYTGSADRKIRVW-------AKPFNEKRHALIA-TLEKHKSAVNALALSDD 308
VA S G + +GS D I++W P K + T HK + ++ +S D
Sbjct: 476 VAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD 535
Query: 309 GTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVR 366
G + SG+ DR+I W DS H +T L+GH +++ + ++ G +GS D R
Sbjct: 536 GKWIISGSKDRTIQFWS-PDSP-HSQLT--LQGHNNSVISVAVSPNGHCFATGSGDLRAR 591
Query: 367 IW 368
IW
Sbjct: 592 IW 593
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 62/207 (29%), Positives = 96/207 (46%)
Query: 225 IYSVSWDKSLKIWRASDLRCLES-IKAH-EDAVNAVAVSAGGT-VYTGSADRKIRVWAKP 281
+ S S D+++ +W D+ E + H +D V V S G + GS D+ IR+W
Sbjct: 403 LVSGSGDRTVCLW---DVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSS 459
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSAN---HMVVTGA 338
L+ L H+ +V ++A S DG L SG+ D +I +W+ + +N M G
Sbjct: 460 -----GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGG 514
Query: 339 L-----RGHGKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKS 391
+ GH IL + ++ G ++SGS DRT++ W D L L+GH V S
Sbjct: 515 ICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS--PDSPHSQLT-LQGHNNSVIS 571
Query: 392 LTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+ AV+ G +GS D R W
Sbjct: 572 V-AVSPNGH----CFATGSGDLRARIW 593
Score = 154 (59.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++IW + R + HE + ++ S G T+ +GS DR + +W E++ L
Sbjct: 367 DQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQK--L 424
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
I + V + S DG + +G+ D+ I +W S+ +V L GH +++ +
Sbjct: 425 ILHTD---DGVTTVMFSPDGQFIAAGSLDKVIRIWT---SSGTLVEQ--LHGHEESVYSV 476
Query: 350 -INVAG-LLMSGSADRTVRIWQ-------RGSDGRFG--CLAVLEGHTKPVKSLTAVTEE 398
+ G L+SGS D T+++W+ S + G C GH + S+T V+ +
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVT-VSPD 535
Query: 399 GQNGVVSVFSGSLDGEIRAWQVSVSCPNSSPLNLQKWN 436
G+ + SGS D I+ W S P+S L LQ N
Sbjct: 536 GK----WIISGSKDRTIQFW--SPDSPHSQ-LTLQGHN 566
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 55/176 (31%), Positives = 81/176 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHAL 289
D + +IW + ++K H + V V+ S G V TGS D IR+W P + L
Sbjct: 165 DNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLW-DP--KSGQCL 221
Query: 290 IATLEKHKSAVNALA-----LSDDGTV--LFSGACDRSILVWDREDSANHMVVTGALRGH 342
L H + +L+ L G+ L S + D +I +WD V + GH
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR----VCQYTMSGH 277
Query: 343 GKAILCLI-NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
++ C+ GLL SGS DRTVR+W S GR C+ +L+ H V L+ T+
Sbjct: 278 TNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGR--CINILKSHAHWVNHLSLSTD 331
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 58/190 (30%), Positives = 88/190 (46%)
Query: 243 RCLESIKAHEDAV--NAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
R +I H + +A A + TG+ D R+W H TL+ H + V
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMH----TLKGHYNWV 189
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL----INVA--G 354
++ S DG V+ +G+ D +I +WD + + ALRGH K I L I++ G
Sbjct: 190 LCVSWSPDGEVIATGSMDNTIRLWDPKSG---QCLGDALRGHSKWITSLSWEPIHLVKPG 246
Query: 355 L---LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSL 411
L S S D T++IW S R C + GHT S++ V GQ G++ +SGS
Sbjct: 247 SKPRLASSSKDGTIKIWDTVS--RV-CQYTMSGHTN---SVSCVKWGGQ-GLL--YSGSH 297
Query: 412 DGEIRAWQVS 421
D +R W ++
Sbjct: 298 DRTVRVWDIN 307
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR 286
S S D ++KIW C ++ H ++V+ V G +Y+GS DR +RVW N +
Sbjct: 253 SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVW--DINSQG 310
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI 346
I L+ H VN L+LS D L GA D + ++ S AL + K
Sbjct: 311 RC-INILKSHAHWVNHLSLSTD-YALRIGAFDHT----GKKPSTPEEAQKKALENYEKIC 364
Query: 347 LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
N ++++ S D T+ +W + +A + GH K V + A + +G+ +
Sbjct: 365 KKNGNSEEMMVTASDDYTMFLWNPLKSTK--PIARMTGHQKLVNHV-AFSPDGRY----I 417
Query: 407 FSGSLDGEIRAW 418
S S D I+ W
Sbjct: 418 VSASFDNSIKLW 429
Score = 128 (50.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 46/201 (22%), Positives = 94/201 (46%)
Query: 223 GLIYSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKP 281
GL+YS S D+++++W S RC+ +K+H VN +++S + G+ D + + P
Sbjct: 290 GLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTP 349
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
++ AL E ++ S++ ++ + + D ++ +W+ S + + G
Sbjct: 350 EEAQKKAL----ENYEKICKKNGNSEE--MMVTASDDYTMFLWNPLKSTKPIA---RMTG 400
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H K + + ++S S D ++++W G DG+F ++ GH V S+ V
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWD-GRDGKF--ISTFRGH---VASVYQVAWSS 454
Query: 400 QNGVVSVFSGSLDGEIRAWQV 420
++ S S D ++ W V
Sbjct: 455 DCRLL--VSCSKDTTLKVWDV 473
Score = 122 (48.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
T S D + +W P + IA + H+ VN +A S DG + S + D SI +WD
Sbjct: 376 TASDDYTMFLW-NPLKSTKP--IARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGR 432
Query: 328 DSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAV-LEG 384
D + T RGH ++ + + LL+S S D T+++W D R L+V L G
Sbjct: 433 DGK--FIST--FRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW----DVRTRKLSVDLPG 484
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
H V ++ + +G+ V SG D +R W
Sbjct: 485 HKDEVYTVDW-SVDGKR----VCSGGKDKMVRLW 513
Score = 106 (42.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFN 283
I S S+D S+K+W D + + + + H +V VA S+ + S D ++VW +
Sbjct: 417 IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW----D 472
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
+ L L HK V + S DG + SG D+ + +W
Sbjct: 473 VRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 55 (24.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 67 SVPSLQKLSPDETIN-FSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRT 125
S P L S D TI + + S +C ++ GH + C+ L + SH DRT
Sbjct: 247 SKPRLASSSKDGTIKIWDTVSRVCQYTMS-GHTNSVSCVKWGGQGLLYSGSH-----DRT 300
Query: 126 GTTWTSINT 134
W IN+
Sbjct: 301 VRVW-DINS 308
Score = 43 (20.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 23/102 (22%), Positives = 40/102 (39%)
Query: 75 SPDETIN-FSSASHLCINSVQLGHKLPIGCIAVHH-NFLYAASSHEINVYDRTGTT--WT 130
S D TI + S C+ GH I ++ + + S + + GT W
Sbjct: 205 SMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Query: 131 SINTFNDNDSSSGSVKSVTFC-----DGKIFTAHQDCKIRVW 167
+++ + SG SV+ C G +++ D +RVW
Sbjct: 265 TVSRVCQY-TMSGHTNSVS-CVKWGGQGLLYSGSHDRTVRVW 304
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 143 (55.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 41/140 (29%), Positives = 70/140 (50%)
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW-DREDSANHMVVTGALRG 341
+E R A++ L+ H S V +++ S G +L + + D+SI +W D ED N+ ++
Sbjct: 134 DEWRFAVL--LDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQE 191
Query: 342 HGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H + C+ L SGS D T+RIW+ D +G +A ++GHT V + E+
Sbjct: 192 HEGDVKCVAWHPAEECLASGSYDDTIRIWREDIDD-WGQVACIKGHTGTVWGID--WEDA 248
Query: 400 QNGVVSVFSGSLDGEIRAWQ 419
+N S + G+ W+
Sbjct: 249 ENVPFPSTSNGVSGQEEEWK 268
Score = 64 (27.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKA-HEDAVNAVA----VSAGGTVYTGSADRKIRVW 278
L+ + S DK+++++ + R L +I H+ ++ A VS + TGS D + +W
Sbjct: 41 LVATCSSDKTVRVYSLVNFRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGIW 100
Query: 279 AK 280
+
Sbjct: 101 RR 102
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 154 (59.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 59/224 (26%), Positives = 99/224 (44%)
Query: 211 HGDAVTGLAV---NNGLIYSVSWDKSLKIWRAS-DLRCL----ESIKAHEDAVNAVAVSA 262
H D VT +A N +I S S DKS+ +W+ + D + + H V V +S+
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 263 GGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSI 321
G +GS D ++R+W + H V ++A S D + S + DR+I
Sbjct: 74 DGQFALSGSWDGELRLWDLAAGVSTRRFVG----HTKDVLSVAFSLDNRQIVSASRDRTI 129
Query: 322 LVWDREDSANHMVVTGALRGHGKAILCLI----NVAGLLMSGSADRTVRIWQRGSDGRFG 377
+W+ + + G GH + C+ + ++S S D+TV++W S+ +
Sbjct: 130 KLWNTLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL-SNCKLR 187
Query: 378 CLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+ L GHT V S AV+ +G SG DG + W ++
Sbjct: 188 --STLAGHTGYV-STVAVSPDGS----LCASGGKDGVVLLWDLA 224
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/189 (26%), Positives = 86/189 (45%)
Query: 247 SIKAHEDAVNAVA--VSAGGTVYTGSADRKIRVWAKPFNEKRHALIAT-LEKHKSAVNAL 303
+++AH D V A+A + + + S D+ I +W ++K + + L H V +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGL-LMSGSA 361
LS DG SG+ D + +WD +A V T GH K +L + ++ ++S S
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDL--AAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
DRT+++W + ++ EGH V + Q +VS S D ++ W +S
Sbjct: 126 DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA---SWDKTVKVWNLS 182
Query: 422 VSCPNSSPL 430
+C S L
Sbjct: 183 -NCKLRSTL 190
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
I S SWDK++K+W S+ + ++ H V+ VAVS G++ +G D + +W
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 226
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
+K ++L A S ++AL S + L + A + I +WD E +
Sbjct: 227 KKLYSLEAN-----SVIHALCFSPNRYWLCA-ATEHGIKIWDLESKS 267
Score = 46 (21.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 405 SVFSGSLDGEIRAWQV 420
++FSG DG IR W +
Sbjct: 309 TLFSGYTDGVIRVWGI 324
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 249 KAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSD 307
+ H D+ N++A S G+ V T S D KI+VW + +AT E+H S+V A+ +
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVW----DITSGFCLATFEEHTSSVTAVQFAK 397
Query: 308 DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADR-T 364
G V+FS + D ++ WD N TG R CL ++ +G ++ +GS D
Sbjct: 398 RGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFN---CLAVDPSGEVVCAGSLDNFD 454
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ +W + G+ L L GH PV L+ E N V++ S S D IR W +
Sbjct: 455 IHVWSVQT-GQL--LDALSGHEGPVSCLSFSQE---NSVLA--SASWDKTIRIWSI 502
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 211 HGDAVTGLAVN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTV-Y 267
H D+ LA + +G + + S D +K+W + CL + + H +V AV + G V +
Sbjct: 344 HFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMF 403
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR-SILVWDR 326
+ S D +R W T + N LA+ G V+ +G+ D I VW
Sbjct: 404 SSSLDGTVRAWDLIRYRNFRTFTGT---ERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSV 460
Query: 327 EDSANHMVVTGALRGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+ + AL GH + CL +L S S D+T+RIW GR + +E
Sbjct: 461 QTGQ----LLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWS--IFGRSQQVEPIEV 514
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSL 411
++ V +L+ + +G+ VS G +
Sbjct: 515 YSD-VLALS-MRPDGKEVAVSTLKGQI 539
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 163 (62.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 204 KKKLWIEHGDAVTGLAVNNGLIYSVS-WDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K W++ D+++ L + + ++ W+ +++ + L C + H +V+A+AV +
Sbjct: 144 KDVAWVKK-DSLSCLLLTASMDQTILLWEWNIERNKVKALHCC---RGHAGSVDAIAVDS 199
Query: 263 GGTVY-TGSADRKIRVWA-----------KPFN-----EKRHAL------IATLEKHKSA 299
GT + +GS D+ +++W+ +P N +K L + TL H A
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGHTEA 259
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL---L 356
++++ SD V S + D ++ VWD E +TG K C I+ + L L
Sbjct: 260 ISSVLWSDADEVC-SASWDHTVRVWDVESGGLKSTLTG-----NKVFNC-ISYSPLCKRL 312
Query: 357 MSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT-AVTEEGQNGVVSVFSGSLDGE 414
SGS DR +R+W R DG L+ L HT V S+ + T + Q + SGSLD
Sbjct: 313 ASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQ-----LISGSLDNM 366
Query: 415 IRAWQVSVSCPNSSPL 430
++ W SC +PL
Sbjct: 367 VKLWDTR-SC--KAPL 379
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV----SAGGTV 266
H D ++ + I S S+DK+ +IW + + +I H D V VA S +
Sbjct: 100 HDDWISSIKGAEEWILSGSYDKTSRIWSLEG-KSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
T S D+ I +W + + H +V+A+A+ GT SG+ D+ + +W
Sbjct: 159 LTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFCSGSWDKMLKIW 216
>UNIPROTKB|A7Z055 [details] [associations]
symbol:PLAA "PLAA protein" species:9913 "Bos taurus"
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:DAAA02022139
EMBL:BC153253 IPI:IPI00692551 RefSeq:NP_001098805.1
UniGene:Bt.28480 STRING:A7Z055 Ensembl:ENSBTAT00000017298
GeneID:506073 KEGG:bta:506073 InParanoid:A7Z055 NextBio:20867436
Uniprot:A7Z055
Length = 796
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 61/217 (28%), Positives = 102/217 (47%)
Query: 223 GLIYSVSWDKSLKIW------RA-SDLRCLESIKAHEDAVNAVAVSAGGTVY------TG 269
G SVS D++ ++W R +++ C+ H + V+ V + VY TG
Sbjct: 32 GAFVSVSRDRTTRLWVPNSPNRGFTEMHCMSG---HSNFVSCVCIIPSSDVYPHGLIATG 88
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
D I V F+ + A + L+ HK+ V +L+ GT+L SG+ D + VW D
Sbjct: 89 GNDHNICV----FSLESPAPLYVLKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LNDK 142
Query: 330 ANHMVVTGALRGHGKAILC--LINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
++T L+GH A+ ++ GL+++GSAD+T+++W+ G C GH
Sbjct: 143 C---MMT--LQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGR-----CERTFSGHED 192
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSC 424
V+ L ++E S + D IR WQ++ C
Sbjct: 193 CVRGLAILSE------TEFLSCANDASIRRWQITGEC 223
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 59/213 (27%), Positives = 95/213 (44%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGTVYT 268
H + V L+ G + S SWD + K+W +D +C+ +++ H AV AV + G + T
Sbjct: 111 HKNTVCSLSSGKFGTLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQGLMLT 168
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GSAD+ I++W E+ T H+ V LA+ + T S A D SI W +
Sbjct: 169 GSADKTIKLWKAGRCER------TFSGHEDCVRGLAILSE-TEFLSCANDASIRRW--QI 219
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ + V + +I N + + DR++RIW+ G C + P
Sbjct: 220 TGECLEVFYGHTNYIYSISVFPNCKDFVTTAE-DRSLRIWKHGE-----CAQTIR---LP 270
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+S+ NG + V G+ DG IR + S
Sbjct: 271 AQSIWCCCVL-DNGDIVV--GASDGIIRVFTES 300
Score = 129 (50.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKP 281
+GLI + D ++ ++ L +K H++ V +++ GT+ +GS D +VW
Sbjct: 82 HGLIATGGNDHNICVFSLESPAPLYVLKGHKNTVCSLSSGKFGTLLSGSWDTTAKVW--- 138
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
N+K + TL+ H +AV A+ + + ++ +G+ D++I +W A T G
Sbjct: 139 LNDK---CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW----KAGRCERT--FSG 189
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT 393
H + L +++ L S + D ++R WQ + CL V GHT + S++
Sbjct: 190 HEDCVRGLAILSETEFL-SCANDASIRRWQITGE----CLEVFYGHTNYIYSIS 238
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 45/142 (31%), Positives = 66/142 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
DK+ ++W +R HE V+ V V+TGS+DR +R+WA
Sbjct: 382 DKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNA---- 437
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ H + ALA S DG L S SIL+WD + +RGHGK +
Sbjct: 438 VRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGR----LLKRMRGHGKGGIWS 493
Query: 350 IN---VAGLLMSGSADRTVRIW 368
++ + +L+SG AD TVR+W
Sbjct: 494 LSWSVESNVLVSGGADGTVRVW 515
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 164 (62.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 56/198 (28%), Positives = 92/198 (46%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWAKPF 282
+I S D ++K+W AS + + + + H ++ ++ S G T+ +GS D+ IR+W
Sbjct: 190 MIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLW-NVL 248
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
K H H + V A+A S G +L SG+ D ++ +WD SA V +L H
Sbjct: 249 TGKAHP--TPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVR-SAR---VMKSLPAH 302
Query: 343 GKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQ 400
+ + ++ L+ S + D VRIW S G+ CL L P S + G+
Sbjct: 303 SDPVSGIDVVWDGTLIASCATDGLVRIWDT-STGQ--CLRTLVHEDNPPVSSVKFSPNGK 359
Query: 401 NGVVSVFSGSLDGEIRAW 418
V + +LD +R W
Sbjct: 360 Y----VLAWTLDDCVRLW 373
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 248 IKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
++ H V+AV S + + +G AD ++VWA + LI T E H + ++ ++ S
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGK----LIYTFEGHLAGISTISWS 227
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG-LLMSGSADRTV 365
DG + SG+ D++I +W+ H T + H + G +L+SGS D V
Sbjct: 228 PDGATIASGSDDKTIRLWNVLTGKAHP--TPFIGHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+W S R + L H+ PV + V + G + + S + DG +R W S
Sbjct: 286 FLWDVRS-ARV--MKSLPAHSDPVSGIDVVWD----GTL-IASCATDGLVRIWDTS 333
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 56/207 (27%), Positives = 92/207 (44%)
Query: 225 IYSVSWDKSLKIWRASDLRCLES-IKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWAKPF 282
I S S DK++++W + + H + V A+A S G + +GS D + +W
Sbjct: 233 IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLW---- 288
Query: 283 NEKRHA-LIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
+ R A ++ +L H V+ + + DGT++ S A D + +WD S + T
Sbjct: 289 -DVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDT--STGQCLRTLVHED 345
Query: 342 HGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT-AVTEEG 399
+ + G +++ + D VR+W +GR CL +GH+ SL+ A G
Sbjct: 346 NPPVSSVKFSPNGKYVLAWTLDDCVRLWDY-VEGR--CLKTYQGHSNKKYSLSGAFGVYG 402
Query: 400 QN------GVVSVFSGSLDGEIRAWQV 420
Q+ G SGS DG I W V
Sbjct: 403 QSIPGRTPGYAFAVSGSEDGAILCWDV 429
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/249 (22%), Positives = 107/249 (42%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDL 242
+D+ +R + +T + H +I H + V +A + ++ S S+D+++ +W
Sbjct: 238 DDKTIRLW---NVLTGKAHPTP-FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA 293
Query: 243 RCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
R ++S+ AH D V+ + V GT+ A D +R+W + L+ + V+
Sbjct: 294 RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV---HEDNPPVS 350
Query: 302 ALALSDDGTVLFSGACDRSILVWDRED----------SANHMVVTGALRGHGKAILCLIN 351
++ S +G + + D + +WD + S ++GA +G++I
Sbjct: 351 SVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTP 410
Query: 352 VAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL-TAVTEEGQNGVVSVFSGS 410
+SGS D + W + L +E H V + T T EG+ V S
Sbjct: 411 GYAFAVSGSEDGAILCWDVVTKK---VLQRIEAHDGVVLGVDTCSTGEGRFMV----SCG 463
Query: 411 LDGEIRAWQ 419
LDG +R W+
Sbjct: 464 LDGTVRVWE 472
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 142 (55.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 52/146 (35%), Positives = 71/146 (48%)
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
I TL HK A++++ SD + S + D +I VWD E + +TG K C
Sbjct: 250 IVTLSGHKEAISSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTG-----NKVFNC- 302
Query: 350 INVAGL---LMSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT-AVTEEGQNGVV 404
I+ + L L SGS DR +R+W R DG L+ L HT V SL + T E Q
Sbjct: 303 ISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQ---- 357
Query: 405 SVFSGSLDGEIRAWQVSVSCPNSSPL 430
+ SGSLD ++ W SC +PL
Sbjct: 358 -LISGSLDNIVKLWDTR-SC--KAPL 379
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 211 HGDAVTGLAVNNGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYT 268
H +A++ + ++ I S SWD ++++W L+S N ++ S + +
Sbjct: 256 HKEAISSVLWSDAEEICSASWDHTIRVWDVES-GSLKSTLTGNKVFNCISYSPLCKRLAS 314
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV-LFSGACDRSILVWDRE 327
GS DR IR+W P + + +L H V +L S L SG+ D + +WD
Sbjct: 315 GSTDRHIRLW-DPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 328 DSANHMVVTGALRGHGKAILCLI-NVAGLLMSGSAD 362
+ L H +L + GLL+SG AD
Sbjct: 374 SCKAPLY---DLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 101 (40.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 247 SIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
++ H++A+++V S + + S D IRVW + + +L +TL +K N ++ S
Sbjct: 252 TLSGHKEAISSVLWSDAEEICSASWDHTIRVW----DVESGSLKSTLTGNK-VFNCISYS 306
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI---NVAGLLMSGSADR 363
L SG+ DR I +WD + + +V+ +L H + L L+SGS D
Sbjct: 307 PLCKRLASGSTDRHIRLWDPR-TKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDN 365
Query: 364 TVRIWQRGS 372
V++W S
Sbjct: 366 IVKLWDTRS 374
Score = 63 (27.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 211 HGDAVTGLAVNN-GLIY-SVSWDKSLKIWRA 239
H +V +AV++ G + S SWDK LKIW A
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKMLKIWSA 218
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 163 (62.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 58/222 (26%), Positives = 98/222 (44%)
Query: 210 EHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCL--ESIKAHEDAVNAVAVSAGGTVY 267
+HGD V+ A + L+ + S DK+++++ SD L +K H AV+ S G V
Sbjct: 10 DHGDDVSCCAFSAALLATCSLDKTIRLYSLSDFAELPYSPLKFHTYAVHCCCFSPSGHVL 69
Query: 268 TG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
S D +W+ + H L + S V S D L SGA D SI +W+
Sbjct: 70 ASCSTDGTTVLWS---SHSGHTLTVLEQPGGSPVRVCCFSPDSAYLASGAADGSIALWNA 126
Query: 327 EDSANHMVVTGALRGHGKAILCLINV-AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + G+++ + C + GL ++GS+ + +W D R CL + H
Sbjct: 127 Q--TYKLYRCGSVKD-SSLVACAFSPDGGLFVTGSSGGDLTVW----DDRMRCLHSEKAH 179
Query: 386 TKPVK--SLTAVTEEGQNGVVS--VFSGSLDGEIRAWQVSVS 423
+ S ++ G G+ S + S D EI+ W V+++
Sbjct: 180 DLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTIT 221
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 47/164 (28%), Positives = 74/164 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA----GGT------VYTGS 270
+ GL + S L +W +RCL S KAH+ + + S+ GG + +
Sbjct: 150 DGGLFVTGSSGGDLTVWD-DRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCG 208
Query: 271 ADRKIRVWAKPFNEKRHALI---ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
D +I++WA + +TL H + V A A S DG +L SG+ D+S+++
Sbjct: 209 QDCEIKLWAVTITRVLGFELKYKSTLSGHCAPVLACAFSHDGKMLASGSVDKSVII---- 264
Query: 328 DSANHMVVTGALRGHGKAIL-CLINVAGLLMS-GSADRTVRIWQ 369
V L H + + C LL++ GS D+TV IWQ
Sbjct: 265 HGIGPQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ 308
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 59/185 (31%), Positives = 86/185 (46%)
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVN 301
RC S++ H +AV +VA S G + +GS D +R W E H T + H+ V
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS-TETPHF---TCQGHRHWVL 161
Query: 302 ALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL----INV---AG 354
+++ S DG L SG + IL+WD V AL GH K I L ++
Sbjct: 162 SISWSPDGKKLASGCKNGQILLWDPSTGKQ---VGRALTGHSKWITALSWEPLHANPECR 218
Query: 355 LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
+ S S D +VR+W + GR C L GH + V L G +G++ +S S D
Sbjct: 219 YVASSSKDGSVRVWDTTA-GR--CERTLTGHAQSVTCL----RWGGDGLL--YSASQDRT 269
Query: 415 IRAWQ 419
I+ W+
Sbjct: 270 IKVWR 274
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 57/214 (26%), Positives = 103/214 (48%)
Query: 211 HGDAVTGLAVN-NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L +GL+YS S D+++K+WRA D +++ H VN +A+S + TG
Sbjct: 246 HAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 305
Query: 270 SAD-RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ + + V A+ + R +L E+ S N L L SG+ D ++ +W +
Sbjct: 306 AFEPAEASVNAQ---DLRGSLQELKERALSRYN-LVRGQGPERLVSGSDDFTLFLWSPAE 361
Query: 329 SANHMVVTGALRGHGKAILCLINV--AGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
+ + GH I ++ + ++ S S D+++++W G G++ LA L GH
Sbjct: 362 DKKPLA---RMTGHQALINQVVFSPDSRVIASASFDKSIKLWD-GRTGKY--LASLRGHV 415
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V + A + + + + SGS D ++ W V
Sbjct: 416 AAVYQI-AWSADSR----LLVSGSSDSTLKVWDV 444
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 59/201 (29%), Positives = 91/201 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNE 284
+ S S D S+++W + RC ++ H +V + G +Y+ S DR I+VW
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVW------ 273
Query: 285 KRH--ALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ H L TL+ H VN +ALS D L +GA + + E S N + G+L+
Sbjct: 274 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA------EASVNAQDLRGSLQEL 326
Query: 343 GKAILCLIN-VAGL----LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
+ L N V G L+SGS D T+ +W D + LA + GH + V
Sbjct: 327 KERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKK--PLARMTGHQALINQ---VVF 381
Query: 398 EGQNGVVSVFSGSLDGEIRAW 418
+ V++ S S D I+ W
Sbjct: 382 SPDSRVIA--SASFDKSIKLW 400
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+I S S+DKS+K+W + L S++ H AV +A SA + +GS+D ++VW
Sbjct: 387 VIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW---- 442
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ K L L H V A+ S DG + SG D+ + +W R
Sbjct: 443 DVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 486
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 225 IYSVSWDKSLKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPF 282
+ S S D +L +W A D + L + H+ +N V S V + S D+ I++W
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW---- 400
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + +A+L H +AV +A S D +L SG+ D ++ VWD ++ L GH
Sbjct: 401 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD----VKAQKLSTDLPGH 456
Query: 343 GKAILCLI-NVAGL-LMSGSADRTVRIWQR 370
+ + + G + SG D+ +RIW+R
Sbjct: 457 ADEVYAVDWSPDGQRVASGGKDKCLRIWRR 486
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 142 SGSVKSVTFC-----DGKIFTAHQDCKIRVWQ 168
+G +SVT C DG +++A QD I+VW+
Sbjct: 244 TGHAQSVT-CLRWGGDGLLYSASQDRTIKVWR 274
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 171 (65.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 64/249 (25%), Positives = 113/249 (45%)
Query: 206 KLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRAS-DLRC-LESI----KAHEDAVNAVA 259
KL + H D V LA + L+ SV D S+++WR D C LE++ H + VA
Sbjct: 374 KLIVGHSDTVMSLAASQNLLISVGKDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGCVA 433
Query: 260 VSAGG-TVYTG-SADRKIRVWAKPFN-EKRHALIATLE----KHKSAVNALALSDDGTVL 312
++ G T + S D ++VW + E R++ L H VN +A + + ++
Sbjct: 434 MTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLI 493
Query: 313 FSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQR 370
+ + D++ VW E + + G LRGH + + + V ++++ S+D T+RIW
Sbjct: 494 ATASQDKTAKVWLAESNT----LQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIW-- 547
Query: 371 GSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-CPNS-S 428
S F C+ + + T + E + + S + DG ++ W + + C S
Sbjct: 548 -SISNFSCIKRFD------QECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLD 600
Query: 429 PLNLQKWNL 437
N + W L
Sbjct: 601 EHNDRVWAL 609
Score = 39 (18.8 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 137 DN-DSSSGSVKSVTFCDGKIFTAHQDCKIRVWQ 168
DN D ++ + TAH+ +R+WQ
Sbjct: 72 DNIDVEEDTITCFGLSQEHLVTAHRSGLLRLWQ 104
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/151 (29%), Positives = 71/151 (47%)
Query: 245 LESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNAL 303
L ++ HED V VA + GT+ D+ IR+W + L+ H+ V +
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVL-LDGHQRTVRGV 64
Query: 304 ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI-LCLINVAG-LLMSGSA 361
+ S+ G L S + D + +W R+D T L GH + C + +G L + S
Sbjct: 65 SWSNCGRYLASSSFDGTTCIWRRQDDTFESCAT--LEGHENEVKACGWSPSGRFLATCSR 122
Query: 362 DRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
D+TV IW+ G D F C +V H++ VK +
Sbjct: 123 DKTVWIWEVGEDEEFECASVQTCHSQDVKKV 153
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/214 (24%), Positives = 88/214 (41%)
Query: 217 GLAVNNGLIYSVSWDKSLKIWRASD---LRCLESIKAHEDAVNAVAVSAG-GTVYTGSAD 272
G + + + + S DK++ IW + C H V V + + S D
Sbjct: 109 GWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYD 168
Query: 273 RKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTV-LFSGACDRSILVWDREDSAN 331
IR + + ++ + TL+KH S V L+ L S A D S+ VW +
Sbjct: 169 NTIRFFCEEVDDWQ--CYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRR 226
Query: 332 HMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQR-GSD--GRFGCLAVLEGHT 386
+ G L H + + + G L + D VR++ + G D R GC + + H+
Sbjct: 227 SWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCSWRLGC-TLTQAHS 285
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ V S V+ G+++ S DG +R WQ+
Sbjct: 286 QDVNS---VSWSPSGGLLA--SAGDDGYVRLWQI 314
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 54/216 (25%), Positives = 86/216 (39%)
Query: 211 HGDAVTGLAVN-NGLIY-SVSWDKSLKIW--RASDLRCLESI-KAHEDAVNAVAVS-AGG 264
H D V +A N +G I S DKS+++W C + H+ V V+ S G
Sbjct: 12 HEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSNCGR 71
Query: 265 TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
+ + S D +W + + ATLE H++ V A S G L + + D+++ +W
Sbjct: 72 YLASSSFDGTTCIWRR--QDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIW 129
Query: 325 D-REDSANHMVVTGALRGHG-KAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVL 382
+ ED K +L + L S S D T+R + D + C L
Sbjct: 130 EVGEDEEFECASVQTCHSQDVKKVLWHPD-RDELASASYDNTIRFFCEEVDD-WQCYCTL 187
Query: 383 EGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+ H V L+ G + S + DG + W
Sbjct: 188 DKHASTVWGLSF----GPGPEPQLASCAADGSVYVW 219
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 56/210 (26%), Positives = 97/210 (46%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H V+G+A+ +G +Y+ S D++L++W + +C +K + + V +S G +
Sbjct: 150 HEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGE-IGCV-LSEGPWLLV 207
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
G + ++ W N + +L V +L + D +LF+G D SIL W
Sbjct: 208 GMPNL-VKAWNIETNADQ-----SLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYNA 259
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ N + +L GH A++ L A L SGS D+T+++W S C+ L H+
Sbjct: 260 ATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVW---SLDNLQCIQTLTDHSSV 316
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
V SL + + S SLD ++ W
Sbjct: 317 VMSLICWDQ-------FLLSCSLDNTVKIW 339
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 59/213 (27%), Positives = 97/213 (45%)
Query: 215 VTGLAVNNGLIYSVSWDKSLKIWRASDL-RCLE---SIKAHEDAVNAVAVSAGGTVYTGS 270
V L V L+++ + D S+ WR + C E S+ H AV + V A +Y+GS
Sbjct: 233 VYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGAN-RLYSGS 291
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D+ I+VW+ N + I TL H S V +L D L S + D ++ +W +
Sbjct: 292 MDKTIKVWSLD-NLQ---CIQTLTDHSSVVMSLICWDQ--FLLSCSLDNTVKIWAAIEGG 345
Query: 331 NHMVVTGALRGHGKAILCLINVAG---LLMSGSADRTVRIWQRGSDGRFGCLAVLE-GHT 386
N V HG LC ++ A +L+ D T+R++ S G F + E G
Sbjct: 346 NLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLF--IRFTERGKI 403
Query: 387 KPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
+ + A+ + G G+ F+G G+++ W+
Sbjct: 404 FAKQEIRAI-QIGPGGIF--FTGDGTGQVKVWK 433
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 52/197 (26%), Positives = 89/197 (45%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V ++ E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCVSFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 51/182 (28%), Positives = 81/182 (44%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C+ L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCVSFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 163 (62.4 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 366 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW-DVLNGN---C 421
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 477
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 478 RFSRDGEILASGSMDNTVRLW 498
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDA-VTGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ + + S D+++++W +
Sbjct: 365 HDRVARLWATDHYQPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 419
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++ S G + TG+ D ++ +W + H L + L+ H V
Sbjct: 420 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTV 474
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
+L S DG +L SG+ D ++ +WD
Sbjct: 475 CSLRFSRDGEILASGSMDNTVRLWD 499
>FB|FBgn0053505 [details] [associations]
symbol:U3-55K "U3 small nuclear riboprotein factor 55K"
species:7227 "Drosophila melanogaster" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0034511 HSSP:P16649
GeneTree:ENSGT00550000075093 KO:K14793 EMBL:AY118520
RefSeq:NP_001014529.1 UniGene:Dm.11010 SMR:Q8MSW9 STRING:Q8MSW9
EnsemblMetazoa:FBtr0091445 GeneID:3346176 KEGG:dme:Dmel_CG33505
UCSC:CG33505-RA CTD:3346176 FlyBase:FBgn0053505 InParanoid:Q8MSW9
OMA:AVGQEHK OrthoDB:EOG4TMPHB GenomeRNAi:3346176 NextBio:849159
Uniprot:Q8MSW9
Length = 484
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 54/185 (29%), Positives = 88/185 (47%)
Query: 202 RHKKKLWIEHGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV- 258
+H K L H D+V GL G +YS + D+S+KIW ++ +ES+ H+ AV ++
Sbjct: 247 KHIKTLK-GHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSID 305
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACD 318
A+S + G +D +R+W K E + LI HK ++ + +D + SG D
Sbjct: 306 ALSRERAITAGGSDCSLRIW-KITEESQ--LI--YNGHKDSIECVKYINDEHFV-SGGMD 359
Query: 319 RSILVWDREDSANHMVVTGALRGHGK--------AILCLINVAGLLMSGSADRTVRIWQR 370
+I +W + T G G+ AI ++N L+ +GS D VR+WQ
Sbjct: 360 GAIGLWSALKK-KPICTTQLAHGVGENGVANWITAIAVVVNT-DLVATGSCDGCVRLWQT 417
Query: 371 GSDGR 375
+ R
Sbjct: 418 NPNAR 422
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 51/206 (24%), Positives = 97/206 (47%)
Query: 234 LKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWAKPFNEKRHALIAT 292
++IW ++ ++++K H D+V + G +Y+ + DR +++W+ +E A + +
Sbjct: 238 IQIWCPQTMKHIKTLKGHRDSVAGLVFRKGTHDLYSAAKDRSVKIWS--LDEM--AYVES 293
Query: 293 LEKHKSAVNAL-ALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-- 349
L H++AV ++ ALS + + +G D S+ +W + + + GH +I C+
Sbjct: 294 LFGHQTAVTSIDALSRERAIT-AGGSDCSLRIWKITEESQLIY-----NGHKDSIECVKY 347
Query: 350 INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLE---GHTKPVKSLTAVTEEGQNGVVSV 406
IN + SG D + +W C L G +TA+ +V+
Sbjct: 348 INDEHFV-SGGMDGAIGLWSALKKKPI-CTTQLAHGVGENGVANWITAIAVVVNTDLVA- 404
Query: 407 FSGSLDGEIRAWQVSVSCPNSSPLNL 432
+GS DG +R WQ + PN+ +NL
Sbjct: 405 -TGSCDGCVRLWQTN---PNARKMNL 426
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 159 (61.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 215 VTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADR 273
+T L + L + DK++ ++ + +++ K H +NAV + T + SAD
Sbjct: 214 ITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADS 273
Query: 274 KIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHM 333
IRVW+ + + A ++ H++ V ++L+ G + S A D S + S +
Sbjct: 274 HIRVWSATDSSSK----AIIDVHQAPVTDISLNASGDYILS-ASDDSYWAFSDIRSGKSL 328
Query: 334 VVTGALRGHGKAILCL-INVAGLLM-SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKS 391
G A+ + + GL+ +G+AD V+IW + A GHT V+S
Sbjct: 329 CKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQT---VAAAFPGHTAAVRS 385
Query: 392 LTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ A +E G + +GS DGE++ W +
Sbjct: 386 I-AFSENGYY----LATGSEDGEVKLWDL 409
Score = 133 (51.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 199 TVRRHKKKLWIEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAV 258
T + H KK+ +AV L +N S S D +++W A+D I H+ V +
Sbjct: 246 TFKGHNKKI-----NAVV-LHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDI 299
Query: 259 AVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACD 318
+++A G ++D ++ + K ++ + AV+++ DG + +GA D
Sbjct: 300 SLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAAD 359
Query: 319 RSILVWDREDSANHMVVTGALRGHGKAILCL-INVAGL-LMSGSADRTVRIW 368
+ +WD ++ V A GH A+ + + G L +GS D V++W
Sbjct: 360 AVVKIWDLKNQT----VAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLW 407
Score = 117 (46.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLR-----CLESIK-AHEDAVNAVAVSAGG 264
H VT +++N Y +S W SD+R C S++ + AV+++ G
Sbjct: 292 HQAPVTDISLNASGDYILSASDD-SYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDG 350
Query: 265 TVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILV 323
++ TG+AD +++W + K + A H +AV ++A S++G L +G+ D + +
Sbjct: 351 LIFGTGAADAVVKIW----DLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKL 406
Query: 324 WD 325
WD
Sbjct: 407 WD 408
Score = 45 (20.9 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 67 SVPSLQKLSPDE--TI---NFSSASHLCINSVQLGHKL 99
S+PSL K+ DE T+ +FS L I +L H L
Sbjct: 71 SIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSL 108
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 165 (63.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 63/234 (26%), Positives = 107/234 (45%)
Query: 224 LIYSVSWDKSLKIWR---ASDLRCLESIKAHEDAVNAVAVSAGGTVY--TGSADRKIRVW 278
L S + D+S+ IWR A + C+ H +V + S + TGS D +++W
Sbjct: 387 LFASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 446
Query: 279 AKP--FNEKRHA------LI---ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
P K A L+ AT H +N++A++ + +L +G+ DR+ +W
Sbjct: 447 PIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLW--- 503
Query: 328 DSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ H + G GH + + C+ + +L + SAD T+++W D F CL EGH
Sbjct: 504 -ALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL-QD--FSCLKTFEGH 559
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSPLNLQK-WNL 437
V + V+ Q ++S SGS DG ++ W + + C + + K W L
Sbjct: 560 DASVLKVVFVSRGTQ--LLSRPSGS-DGLVKLWTIKNNECVKTLDAHEDKVWGL 610
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 161 (61.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 208 WIEHGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
++ H D VT + + + L+ S S D+++++W KAH V +V SA G
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73
Query: 266 -VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
+ T S D+ I+VW+ R + +L +H V S DG ++ S + D++I +W
Sbjct: 74 FLATASEDKSIKVWSM----YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 129
Query: 325 DREDSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIW 368
D + N V G A N +G + S +D+TV++W
Sbjct: 130 D---TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 186 DRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLR 243
DR +R +P+ +R K + H V + + + + + S DKS+K+W R
Sbjct: 39 DRTVRLWIPD-----KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR 93
Query: 244 CLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
L S+ H V S G + S D+ I++W N++ + N
Sbjct: 94 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQ---CVNNFSDSVGFANF 149
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGS 360
+ + GT + S D+++ VWD N ++ + H + C+ + +G L++ S
Sbjct: 150 VDFNPSGTCIASAGSDQTVKVWDVR--VNKLLQHYQV--HSGGVNCISFHPSGNYLITAS 205
Query: 361 ADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+D T++I +GR + L+GHT PV T +G G + SG D ++ W+
Sbjct: 206 SDGTLKILDL-LEGRL--IYTLQGHTGPV--FTVSFSKG--GELFA-SGGADTQVLLWRT 257
Query: 421 S---VSCPNSSPLNLQK 434
+ + C + NL++
Sbjct: 258 NFDELHCKGLTKRNLKR 274
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 64/254 (25%), Positives = 102/254 (40%)
Query: 95 LGHKLPIGCI--AVHHNFLYAASSHEINVYDRTGTTWT--SINTFNDNDSSSGSVKSVTF 150
+GHK + + + H N L +AS DRT W F++ + + V+SV F
Sbjct: 15 VGHKDVVTSVQFSPHGNLLASASR------DRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 68
Query: 151 -CDGKIF-TAHQDCKIRVWQXXXXXXXXXXXXXXXVNDRLLRFMLPNSYVTVRRHKKKLW 208
DG+ TA +D I+VW R +F P+ + V + K
Sbjct: 69 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWV-RCAKFS-PDGRLIVSCSEDKT- 125
Query: 209 IEHGDAVTGLAVNN-----GL------------IYSVSWDKSLKIWRASDLRCLESIKAH 251
I+ D VNN G I S D+++K+W + L+ + H
Sbjct: 126 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 185
Query: 252 EDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
VN ++ G + T S+D +++ E R LI TL+ H V ++ S G
Sbjct: 186 SGGVNCISFHPSGNYLITASSDGTLKIL--DLLEGR--LIYTLQGHTGPVFTVSFSKGGE 241
Query: 311 VLFSGACDRSILVW 324
+ SG D +L+W
Sbjct: 242 LFASGGADTQVLLW 255
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 166 (63.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 58/191 (30%), Positives = 91/191 (47%)
Query: 234 LKIWR-ASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIA 291
L +W S+ L+ ++H DA++ + S+ G + TG+ D KI+VW + I
Sbjct: 321 LLVWEWQSESYVLKQ-QSHYDALSTLQYSSDGQRIITGADDGKIKVW----DMNSGFCIV 375
Query: 292 TLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLIN 351
T +H SAV+ L S G VLFS + D S+ WD N T R I ++
Sbjct: 376 TFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIA--VD 433
Query: 352 VAG-LLMSGSADR-TVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSG 409
+G ++ +GS D + +W + G+ L L GH PV SL+ +G + + SG
Sbjct: 434 PSGEIVCAGSQDSFEIFMWSVQT-GQL--LETLAGHEGPVSSLSF----NSSGSL-LASG 485
Query: 410 SLDGEIRAWQV 420
S D +R W +
Sbjct: 486 SWDKTVRIWDI 496
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 61/216 (28%), Positives = 99/216 (45%)
Query: 211 HGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTV-Y 267
H DA++ L ++ I + + D +K+W + C+ + H AV+ + S G V +
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLF 397
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR-SILVWDR 326
+ S D +R W R+ T + + +A+ G ++ +G+ D I +W
Sbjct: 398 SSSLDGSVRAW--DLIRYRNFRTFTAPS-RVQFSCIAVDPSGEIVCAGSQDSFEIFMWSV 454
Query: 327 EDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+ ++ T L GH + L N +G LL SGS D+TVRIW S R G + L
Sbjct: 455 Q--TGQLLET--LAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFS--RSGIVEPLP- 507
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
V SL A +G+ V+ SLDG++ W V
Sbjct: 508 IPSDVLSL-AFHPDGKEVCVA----SLDGQLTFWNV 538
Score = 44 (20.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 225 IYSVSWDKSLKIWRASDL 242
IY+VS D +L +W+ S L
Sbjct: 205 IYTVSKDGALFVWKYSPL 222
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 164 (62.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 49 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 105
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 106 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 161
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 162 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 213
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 214 IIITGSEDGTVRIWHSS 230
Score = 138 (53.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 56 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 113
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 114 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 169
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 170 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 225
Query: 367 IW 368
IW
Sbjct: 226 IW 227
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 158 (60.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 48/167 (28%), Positives = 79/167 (47%)
Query: 211 HGDAVT--GLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H DAVT ++N + S S D +L IW H+DAV V S G +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D+ +R+W P N K + + H + V ++ DG +L + + D+++ VW
Sbjct: 78 SGSRDKTVRIWV-P-NVKGESTV--FRAHTATVRSVHFCSDGQLLVTASDDKTVKVW--- 130
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGS 372
S + +L H + C + G L++S S D+TV++W + S
Sbjct: 131 -STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPF 282
LI S S DK++K+W + C+ S H V V GT + D ++VW
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW---- 214
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
+ + H L+ + H +AVNAL+ G L + + D ++ + D + ++ T L GH
Sbjct: 215 DTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG--RLLYT--LHGH 270
Query: 343 -GKAILCLINVAG-LLMSGSADRTVRIWQRGSD 373
G A + G SG +D V +W+ D
Sbjct: 271 QGPATTVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Score = 132 (51.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 42/163 (25%), Positives = 82/163 (50%)
Query: 211 HGDAVT--GLAVNNGLIYSVSWDKSLKIWRASDLRCLESI-KAHEDAVNAVAV-SAGGTV 266
H DAVT + + L+ S S DK+++IW +++ ++ +AH V +V S G +
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLL 118
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
T S D+ ++VW+ R + +L +H + V S DG ++ S + D+++ +WD+
Sbjct: 119 VTASDDKTVKVWST----HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 327 EDSANHMVVTGALRGHGKAILCLINVAGLLMSGSA-DRTVRIW 368
++ V + G G + +G ++ + D TV++W
Sbjct: 175 --TSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 159 (61.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 53/201 (26%), Positives = 89/201 (44%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 227
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD TG +
Sbjct: 228 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-K 283
Query: 341 GHGKAILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
I +V G ++SGS D V IW S + L+GHT V L
Sbjct: 284 NEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE---VVQKLQGHTDTV--LCTACHP 338
Query: 399 GQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 339 TENIIASAALEN-DKTIKLWK 358
Score = 159 (61.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 58/216 (26%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
+GS D+ ++VW + + TL+ H + V + ++ SG+ D S+ +WD
Sbjct: 131 SGSDDKTLKVWELSTGKS----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 187 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 239
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 240 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 271
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/175 (28%), Positives = 78/175 (44%)
Query: 256 NAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSG 315
N+V T SA K + KP + L TL H AV+A+ S +G L S
Sbjct: 35 NSVGQPGATTSSNSSASNKSSLSVKP----NYTLKFTLAGHTKAVSAVKFSPNGEWLASS 90
Query: 316 ACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGR 375
+ D+ I +W D ++G G + + + LL+SGS D+T+++W+ S G+
Sbjct: 91 SADKLIKIWGAYDGKFEKTISGHKLGISD--VAWSSDSRLLVSGSDDKTLKVWEL-STGK 147
Query: 376 FGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
L L+GH+ V Q+ ++ SGS D +R W V C + P
Sbjct: 148 --SLKTLKGHSNYV---FCCNFNPQSNLI--VSGSFDESVRIWDVRTGKCLKTLP 195
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 165 (63.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 58/200 (29%), Positives = 91/200 (45%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFN 283
I + S D ++++ + L + S +AH D + +AV V T S D I++W
Sbjct: 72 ILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNW--- 128
Query: 284 EKRHALIATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
EK A E H V + + D S + DR++ VW +N T L GH
Sbjct: 129 EKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQL--GSNFANFT--LEGH 184
Query: 343 GKAILCLINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
K + C+ G L+SG+ DR V+IW + C+ LEGH + +++AV
Sbjct: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQ---NISAVCFH 238
Query: 399 GQNGVVSVFSGSLDGEIRAW 418
+ +V +GS DG +R W
Sbjct: 239 PELPIV--LTGSEDGTVRIW 256
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/178 (29%), Positives = 79/178 (44%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDL-RCLESIKAHEDAVNAVAVSA--GGT 265
H D + +AV+ L+ + S D +K+W + C + H V + + T
Sbjct: 98 HSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNT 157
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SDDGTVLFSGACDRSILV 323
+ S DR ++VW N TLE H+ VN + D L SGA DR + +
Sbjct: 158 FASASLDRTVKVWQLGSNFANF----TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
Query: 324 WDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCL 379
WD ++ V T L GH + I +C ++++GS D TVRIW G+ CL
Sbjct: 214 WDYQNKT--CVQT--LEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCL 267
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 161 (61.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 51/166 (30%), Positives = 78/166 (46%)
Query: 208 WIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLES-IKAHEDAVNAVAVSAGG 264
++ H D VT + + L+ S S D+++++W D R S KAH V +V SA G
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 265 T-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILV 323
+ T S D+ I+VW N R + +L +H V S DG ++ S + D++I +
Sbjct: 115 QFLATASEDKSIKVW----NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 324 WDREDSANHMVVTGALRGHGKAILCLINVAGL-LMSGSADRTVRIW 368
WD + N V G A N G + S +D TV+IW
Sbjct: 171 WD---TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/257 (22%), Positives = 117/257 (45%)
Query: 186 DRLLRFMLPNSYVTVRRHKKKLWIEHGDAVTGL--AVNNGLIYSVSWDKSLKIWRASDLR 243
DR +R +P+ +R K + H V + + + + + S DKS+K+W R
Sbjct: 81 DRTVRLWIPD-----KRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQR 135
Query: 244 CLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSAVNA 302
L S+ H V S G + S D+ I++W N++ + N
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQ---CVNNFSDSVGFANF 191
Query: 303 LALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGS 360
+ + +GT + S D ++ +WD N ++ + H + C+ + +G +++ S
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWDIR--VNKLLQHYQV--HSGGVNCVSFHPSGNYIITAS 247
Query: 361 ADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+D T++I +GR + L+GHT PV +++ ++ G+ + S SG D ++ W+
Sbjct: 248 SDGTLKILDL-LEGRL--IYTLQGHTGPVFTVS-FSKGGE--LFS--SGGADTQVLLWRT 299
Query: 421 S---VSCPNSSPLNLQK 434
+ ++C + NL++
Sbjct: 300 NFDYLNCKDMIKRNLKR 316
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/219 (25%), Positives = 97/219 (44%)
Query: 211 HGDAVTGLAVN-NGL-IYSVSWDKSLKIWRAS-DLRCLESIKAHEDAVNAVAVSA-GGTV 266
H A+T + + +G + + SWD L +W R + H+D V +V S G +
Sbjct: 17 HKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGNLL 75
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
+ S DR +R+W P +KR + + H + V ++ S DG L + + D+SI VW+
Sbjct: 76 ASASRDRTVRLWI-P--DKR-GKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 327 EDSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+L H + C + G L++S S D+T++IW + C+
Sbjct: 132 YRQR----FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ---CV---NN 181
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS 423
+ V V + NG +GS D ++ W + V+
Sbjct: 182 FSDSVGFANFV-DFNPNGTCIASAGS-DHTVKIWDIRVN 218
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 167 (63.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 203 HKKKLW---IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRA--SDLRCLESIKAHEDAVNA 257
HK+ +W I V+G ++++ K I+R S +RCLE + +
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHG 449
Query: 258 VAVSAGGTVY--TGSADRKIRVWAKPFN----------------EKRHALIATLEKHKSA 299
V + Y +GS D +RVW P N EK + TL H +
Sbjct: 450 VEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDS 509
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVA--GLLM 357
V + S G +L SG+ D SI +W R + + LRGH I ++ + +
Sbjct: 510 VRTI--SGYGDILVSGSYDSSIRIW-RVSTGECLY---HLRGHSLRIYSVLYEPERNICI 563
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
SGS D+++R+W S G C VLEGH V L QN ++S GS D IR
Sbjct: 564 SGSMDKSIRVWDL-STGT--CKYVLEGHDAFVTLLNVF----QNRLIS---GSADSTIRI 613
Query: 418 WQVSVSCP 425
W ++ P
Sbjct: 614 WDLNTGKP 621
Score = 145 (56.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 47/182 (25%), Positives = 90/182 (49%)
Query: 193 LPNSYVTVRRHKKKLW-----IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLES 247
LP++ ++ R +K + I H D+V ++ ++ S S+D S++IWR S CL
Sbjct: 483 LPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYH 542
Query: 248 IKAHEDAVNAVAVSAGGTV-YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
++ H + +V + +GS D+ IRVW ++ L E H + V L +
Sbjct: 543 LRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVL----EGHDAFVTLLNVF 598
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVR 366
+ L SG+ D +I +WD ++ ++V + G+ I ++ ++SG+ D +V+
Sbjct: 599 QNR--LISGSADSTIRIWDL-NTGKPLMVLPSNSGY---ISSFVSDEHKIISGN-DGSVK 651
Query: 367 IW 368
+W
Sbjct: 652 LW 653
Score = 40 (19.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 96 GHKLPIGCIAVHHNFLYAAS 115
GHK + + +H N L + S
Sbjct: 389 GHKEGVWAVKIHENTLVSGS 408
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 72/256 (28%), Positives = 119/256 (46%)
Query: 204 KKKLWIEHGDAVTGLAVNNGLIYSVS-WDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K W++ D+++ L ++ + ++ W+ +++ + L C + H +V+++AV
Sbjct: 144 KDVAWVKK-DSLSCLLLSASMDQTILLWEWNVERNKVKALHCC---RGHAGSVDSIAVDG 199
Query: 263 GGTVY-TGSADRKIRVWAK-PFNE---------------KRHAL------IATLEKHKSA 299
GT + +GS D+ +++W+ P +E K L I TL H A
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEA 259
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL---L 356
V+++ SD + S + D +I VWD E + +TG K C I+ + L L
Sbjct: 260 VSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTG-----NKVFNC-ISYSPLCKRL 312
Query: 357 MSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT-AVTEEGQNGVVSVFSGSLDGE 414
SGS DR +R+W R DG L+ L HT V S+ + T E Q + SGSLD
Sbjct: 313 ASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQ-----LISGSLDNI 366
Query: 415 IRAWQVSVSCPNSSPL 430
++ W SC +PL
Sbjct: 367 VKLWDTR-SC--KAPL 379
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 163 (62.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAG-GTVYTGSADRKIRVWAKPFNEK 285
S S D++ +IW ++ L + H V+ V + TGS+D+ +R+W E
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC 536
Query: 286 RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKA 345
I H+S V +LA+S DG + SG D +I++WD + +T L GH
Sbjct: 537 VRIFIG----HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR---CIT-PLMGHNSC 588
Query: 346 I--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
+ L LL SGSAD TV++W S + G++ ++SL
Sbjct: 589 VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSL 637
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 51/202 (25%), Positives = 87/202 (43%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG-SADRKIRVWAKPFN 283
+ S S D ++++W L K H V S G + S DR R+W+
Sbjct: 433 VLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD-- 490
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
R + + H S V+ + + + +G+ D+++ +WD + + G H
Sbjct: 491 --RIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG----HR 544
Query: 344 KAILCL-INVAGLLM-SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQN 401
+L L ++ G M SG D T+ +W S R C+ L GH V SL+ G+
Sbjct: 545 SMVLSLAMSPDGRYMASGDEDGTIMMWDL-STAR--CITPLMGHNSCVWSLSY---SGEG 598
Query: 402 GVVSVFSGSLDGEIRAWQVSVS 423
+++ SGS D ++ W V+ S
Sbjct: 599 SLLA--SGSADCTVKLWDVTSS 618
>UNIPROTKB|F1NGY5 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AADN02062576 IPI:IPI00577520
ProteinModelPortal:F1NGY5 Ensembl:ENSGALT00000002747 Uniprot:F1NGY5
Length = 805
Score = 164 (62.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 60/220 (27%), Positives = 100/220 (45%)
Query: 217 GLAVNNGLIYSVSWDKSLKIWRASDLRC----LESIKAHEDAVNAVAVSAGGTVY----- 267
GL G + SVS D++ ++W L + ++ H + V+ V + +Y
Sbjct: 38 GLFPEGGFV-SVSRDRTARLWTPDGLNRGFTEMHCMRGHSNFVSCVCIIPPSDLYPRGLI 96
Query: 268 -TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
TG D I V F A + L+ H + V +L+ GT+L SG+ D + VW
Sbjct: 97 ATGGNDHNICV----FTVDNTAPLYVLKGHTNTVCSLSSGKFGTLL-SGSWDTTCKVWLN 151
Query: 327 EDSANHMVVTGALRGHGKAILC--LINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+ ++T L+GH AI ++ GL+++GSAD+T+++W+ G C G
Sbjct: 152 D----RCMMT--LQGHTAAIWAVKILPEQGLMLTGSADKTIKLWKAGR-----CERTYAG 200
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSC 424
H V+ L ++E + S S D +R W +S C
Sbjct: 201 HEDCVRGLAILSE------MEFLSCSNDASVRRWHISGEC 234
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/234 (25%), Positives = 106/234 (45%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGTVYT 268
H + V L+ G + S SWD + K+W +D RC+ +++ H A+ AV + G + T
Sbjct: 122 HTNTVCSLSSGKFGTLLSGSWDTTCKVW-LND-RCMMTLQGHTAAIWAVKILPEQGLMLT 179
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GSAD+ I++W E+ +A H+ V LA+ + L S + D S+ W
Sbjct: 180 GSADKTIKLWKAGRCERTYA------GHEDCVRGLAILSEMEFL-SCSNDASVRRWHISG 232
Query: 329 SANHMVVTGALRGHGKAILCLI---NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
H+ GH I + + + +G DR++RIW++G C+ +
Sbjct: 233 ECLHVYY-----GHTNYIYSVSVFPHCKDFITTGE-DRSLRIWKQGE-----CVQTIRLP 281
Query: 386 TKPVKSLTAVTEE-----GQNGVVSVFSGSLDG-----EIRAWQVSVSCPNSSP 429
+ V + + +G++ VF+ SL+ EI+A++ +S + P
Sbjct: 282 AQSVWCCCVLDNDDIVVGASDGIIRVFTKSLERTASAEEIQAFENELSQASIDP 335
>TAIR|locus:2131799 [details] [associations]
symbol:ZFWD1 "zinc finger WD40 repeat protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR000571
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642
PROSITE:PS50082 PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320
SMART:SM00356 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL079350
EMBL:AJ252063 EMBL:BT026122 IPI:IPI00530759 RefSeq:NP_194274.2
UniGene:At.32255 ProteinModelPortal:Q9FNZ2 SMR:Q9FNZ2 IntAct:Q9FNZ2
STRING:Q9FNZ2 PRIDE:Q9FNZ2 EnsemblPlants:AT4G25440.1 GeneID:828649
KEGG:ath:AT4G25440 GeneFarm:3766 TAIR:At4g25440
HOGENOM:HOG000239729 InParanoid:Q9FNZ2 OMA:WNTQTNT PhylomeDB:Q9FNZ2
ProtClustDB:CLSN2687444 Genevestigator:Q9FNZ2 Uniprot:Q9FNZ2
Length = 430
Score = 160 (61.4 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 56/210 (26%), Positives = 98/210 (46%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H VTG+A+ +G +Y+ S D++++IW + +C + + V + +S G +
Sbjct: 143 HQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE-VGCI-ISEGPWLLV 200
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
G + ++ W N + +A ++ L V +L + D +LF+G D SILVW
Sbjct: 201 GMPNL-VKAW----NIQNNADLS-LNGPVGQVYSLVVGTD--LLFAGTQDGSILVWRYNS 252
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ + +L GH A++ L A L SG+ D ++++W S C+ L HT
Sbjct: 253 TTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVW---SLDNLQCIQTLTEHTSV 309
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
V SL + + S SLD ++ W
Sbjct: 310 VMSLICWDQ-------FLLSCSLDNTVKIW 332
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 55/219 (25%), Positives = 99/219 (45%)
Query: 215 VTGLAVNNGLIYSVSWDKSLKIWRA-SDLRCLE---SIKAHEDAVNAVAVSAGGTVYTGS 270
V L V L+++ + D S+ +WR S C + S+ H AV ++ V A +Y+G+
Sbjct: 226 VYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGAN-RLYSGA 284
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D I+VW+ N + I TL +H S V +L D L S + D ++ +W +
Sbjct: 285 MDNSIKVWSLD-NLQ---CIQTLTEHTSVVMSLICWDQ--FLLSCSLDNTVKIWAATEGG 338
Query: 331 NHMVVTGALRGHGKAILCLINVAG---LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
N V +G LC ++ A +L+ D ++ ++ S G + +
Sbjct: 339 NLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQ---- 394
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSV-SCP 425
++S+ + G G+ F+G G+++ W+ S S P
Sbjct: 395 EIRSI----QIGPGGIF--FTGDGSGQVKVWKWSTESTP 427
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 164 (62.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 49 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 105
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 106 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 161
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 162 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 213
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 214 IIITGSEDGTVRIWHSS 230
Score = 138 (53.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 56 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 113
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 114 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 169
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 170 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 225
Query: 367 IW 368
IW
Sbjct: 226 IW 227
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D ++++ + L + +AH D + +AV + T S D I++W +K+ +
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW---DKKWSC 134
Query: 290 IATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
E H V + ++ D S + DR+I VW S+ + L GH K + C
Sbjct: 135 SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT----LEGHEKGVNC 190
Query: 349 LINVAG----LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVV 404
+ +G L+SG+ DR V+IW + C+ LEGH + V + E +
Sbjct: 191 IDYYSGGDKPYLISGADDRLVKIWDYQNKT---CVQTLEGHAQNVSCASFHPE-----LP 242
Query: 405 SVFSGSLDGEIRAWQVS 421
+ +GS DG +R W S
Sbjct: 243 IIITGSEDGTVRIWHSS 259
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 196 SYVTVRRHKKKLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWR-ASDLRCLESIKAHE 252
+Y T+ R ++ H D + +AV+ I + S D +K+W C + + H
Sbjct: 85 NYNTLER--VHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 253 DAVNAVAVSA--GGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT 310
V + ++ + S DR I+VW + TLE H+ VN + G
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF----TLEGHEKGVNCIDYYSGGD 198
Query: 311 --VLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVR 366
L SGA DR + +WD ++ V T L GH + + C L +++GS D TVR
Sbjct: 199 KPYLISGADDRLVKIWDYQNKT--CVQT--LEGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 367 IW 368
IW
Sbjct: 255 IW 256
>UNIPROTKB|G3V5X7 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0030529
EMBL:AL355075 InterPro:IPR007111 PROSITE:PS50837 HGNC:HGNC:11726
ChiTaRS:TEP1 InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271
Pfam:PF05386 PROSITE:PS51226 Ensembl:ENST00000556935
ArrayExpress:G3V5X7 Bgee:G3V5X7 Uniprot:G3V5X7
Length = 2519
Score = 179 (68.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 66/238 (27%), Positives = 105/238 (44%)
Query: 205 KKLWI--EHGDAVTGLAVNNGLIYSVSWDKSLKIW---------RASDLRCLESIKAHED 253
+ LW+ V GLA + L+ S S D ++++W +A D C ++ HE
Sbjct: 1895 QSLWLLSRFQKPVLGLATSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEG 1954
Query: 254 AVNAVAVSA-GGTVYTGSADRKIRVWAKPFNEKRHALIATLEK-HKSAVNALALSDDGTV 311
V+ + S GG++ TG DR + W K LI + H+ V A + D +
Sbjct: 1955 PVSCCSFSTDGGSLATGGRDRSLLCWDVR-TPKTPVLIHSFPACHRDWVTGCAWTKDN-L 2012
Query: 312 LFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQ-R 370
L S + D S+ +WD E S + G GH A+ + V ++S S D T+++W +
Sbjct: 2013 LISCSSDGSVGLWDPE-SGQRL---GQFLGHQSAVSAVAAVEEHVVSVSRDGTLKVWDHQ 2068
Query: 371 GSDGRFGCLAVLEGHTKPVKSLTAVTEE---GQNGV-VSVFSGSLDGEIRAWQVSVSC 424
G + L + H+ P+ A E GQ G + V + LDG R W + C
Sbjct: 2069 GVE-----LTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVC 2121
Score = 142 (55.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 214 AVTGLA-VNNGLIYSVSWDKSLKIWRASD--LRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
AV+ LA ++ ++ S + D SL+ W + L+ L + + V +A S + + S
Sbjct: 1863 AVSALAWLSPKVLVSGAEDGSLQGWALKECSLQSLWLLSRFQKPVLGLATSQE-LLASAS 1921
Query: 271 ADRKIRVWAKPFNEKRHAL----IAT-LEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
D +++W + + H T L H+ V+ + S DG L +G DRS+L WD
Sbjct: 1922 EDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWD 1981
Query: 326 REDSANHMVVTGALRGHGKAIL-CLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+++ H + C LL+S S+D +V +W S R G G
Sbjct: 1982 VRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLISCSSDGSVGLWDPESGQRLGQFL---G 2038
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
H V ++ AV E VVSV S DG ++ W
Sbjct: 2039 HQSAVSAVAAVEEH----VVSV---SRDGTLKVW 2065
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++ TA +D K++VW
Sbjct: 1790 QLLTAGEDGKVQVW 1803
>TAIR|locus:2164456 [details] [associations]
symbol:AT5G40880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000571 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB011477 HOGENOM:HOG000239729 EMBL:BT030400 EMBL:AJ252065
IPI:IPI00524162 RefSeq:NP_198904.1 UniGene:At.25457
UniGene:At.30265 ProteinModelPortal:Q9FKR9 SMR:Q9FKR9 STRING:Q9FKR9
PRIDE:Q9FKR9 EnsemblPlants:AT5G40880.1 GeneID:834089
KEGG:ath:AT5G40880 GeneFarm:3785 TAIR:At5g40880 InParanoid:Q9FKR9
OMA:AALEGHK PhylomeDB:Q9FKR9 ProtClustDB:CLSN2686199
Genevestigator:Q9FKR9 Uniprot:Q9FKR9
Length = 472
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 211 HGDAVTGLAVNNGL--IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H + + G+A+ G ++SVS D +L IW + +C+ SI +A + + S G V+
Sbjct: 186 HKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLI--SEGPWVFL 243
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
G + K FN + + LE V+A+ ++ +LF+G SILVW D
Sbjct: 244 GLPNA-----VKAFNVQNSKDVH-LEGVVGQVHAMTAANG--MLFAGTSSGSILVWKATD 295
Query: 329 S-ANHMVVTGALRGHGKA-ILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHT 386
S ++ +L GH + C + +L SGS D+T+++W + C L+ H
Sbjct: 296 SESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNT---LQCRMTLKQHI 352
Query: 387 KPVKSL 392
V SL
Sbjct: 353 GTVTSL 358
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 58/237 (24%), Positives = 104/237 (43%)
Query: 193 LPNSYVTVR-RHKKKLWIEHG-DAVTGLAVNNGLIYSVSWDKSLKIWRASD-----LRCL 245
LPN+ ++ K + +E V + NG++++ + S+ +W+A+D + L
Sbjct: 245 LPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYL 304
Query: 246 ESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL 305
S++ H V G +Y+GS D+ I+VW N + + TL++H V +L
Sbjct: 305 TSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVW--DLNTLQCRM--TLKQHIGTVTSLLC 360
Query: 306 SDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTV 365
D L S + D +I +W ++ + VV K L + + G+ + +
Sbjct: 361 WDK--CLISSSLDGTIKLWACSENESLKVVQTR-----KQELSVHTLCGMHDAEAKPIMF 413
Query: 366 RIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE-GQNGVVSVFSGSLDGEIRAWQVS 421
+Q G+ G F L E K + T T G G++ FSG G +R W ++
Sbjct: 414 CSYQNGAVGIFD-LPSFEERGKMFSTQTICTLTIGPGGLL--FSGDKSGNLRVWSLA 467
Score = 119 (46.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 40/165 (24%), Positives = 71/165 (43%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H VT V ++YS S DK++K+W + L+C ++K H V ++ + + + S
Sbjct: 311 HSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL-LCWDKCLISSS 369
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGT---VLFSGACDRSILVWDRE 327
D I++WA NE ++ T K + +V+ L D ++F + ++ ++D
Sbjct: 370 LDGTIKLWACSENESLK-VVQT-RKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLP 427
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGS 372
G + I GLL SG +R+W S
Sbjct: 428 SFEER----GKMFSTQTICTLTIGPGGLLFSGDKSGNLRVWSLAS 468
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 143 GSVKSVTFCDGKIFTAHQDCKIRVWQ 168
G V ++T +G +F I VW+
Sbjct: 267 GQVHAMTAANGMLFAGTSSGSILVWK 292
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 256 NAVAVSAGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSG 315
N VA +A T G++ + ++ KP+ RH + TLE H +A++ + S+DG +L S
Sbjct: 10 NGVA-NANSTGNAGTSGN-VPIY-KPY---RH--LKTLEGHTAAISCVKFSNDGNLLASA 61
Query: 316 ACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSD 373
+ D+++++W SA + + GH I L + + S S D T+RIW S
Sbjct: 62 SVDKTMILW----SATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSP 117
Query: 374 GRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
+ CL VL GHT V + N +VS GS D IR W+V
Sbjct: 118 --YECLKVLRGHTNFVFCVNF--NPPSNLIVS---GSFDETIRIWEV 157
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/206 (27%), Positives = 95/206 (46%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAK 280
+ LI S S+D++++IW +C+ IKAH +++V + G+ + + S D ++W
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW-- 197
Query: 281 PFNEKRHALIATLEKHKS-AVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL KS AV+ S +G + D ++ + + V TG
Sbjct: 198 --DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG-- 253
Query: 340 RGHGKAILCLINVAGL-----LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
H + C+ + + ++SGS D V +W R L LEGHT V S++
Sbjct: 254 --HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL--QAR-NILQRLEGHTDAVISVSC 308
Query: 395 VTEEGQNGVVSVFSGS-LDGEIRAWQ 419
QN + S SG+ LD IR W+
Sbjct: 309 --HPVQNEISS--SGNHLDKTIRIWK 330
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 71/256 (27%), Positives = 119/256 (46%)
Query: 204 KKKLWIEHGDAVTGLAVNNGLIYSVS-WDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA 262
K W++ D+++ L ++ + ++ W+ +++ + L C + H +V+++AV
Sbjct: 144 KDVAWVKK-DSLSCLLLSASMDQTILLWEWNVERNKVKALHCC---RGHAGSVDSIAVDG 199
Query: 263 GGTVY-TGSADRKIRVWAK-PFNE---------------KRHAL------IATLEKHKSA 299
GT + +GS D+ +++W+ P +E K L + TL H A
Sbjct: 200 SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEA 259
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGL---L 356
V+++ SD + S + D +I VWD E + +TG K C I+ + L L
Sbjct: 260 VSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTG-----NKVFNC-ISYSPLCKRL 312
Query: 357 MSGSADRTVRIWQ-RGSDGRFGCLAVLEGHTKPVKSLT-AVTEEGQNGVVSVFSGSLDGE 414
SGS DR +R+W R DG L+ L HT V S+ + T E Q + SGSLD
Sbjct: 313 ASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQ-----LISGSLDNI 366
Query: 415 IRAWQVSVSCPNSSPL 430
++ W SC +PL
Sbjct: 367 VKLWDTR-SC--KAPL 379
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 604 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW-DVLNGN---C 659
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 715
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 716 RFSRDGEILASGSMDNTVRLW 736
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDA-VTGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ + + S D+++++W +
Sbjct: 603 HDRVARLWATDHYQPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 657
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++ S G + TG+ D ++ +W + H L + L+ H V
Sbjct: 658 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTV 712
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
+L S DG +L SG+ D ++ +WD
Sbjct: 713 CSLRFSRDGEILASGSMDNTVRLWD 737
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW-DVLNGN---C 661
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 717
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 718 RFSRDGEILASGSMDNTVRLW 738
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDA-VTGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ + + S D+++++W +
Sbjct: 605 HDRVARLWATDHYQPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++ S G + TG+ D ++ +W + H L + L+ H V
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTV 714
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
+L S DG +L SG+ D ++ +WD
Sbjct: 715 CSLRFSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW-DVLNGN---C 661
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 717
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 718 RFSRDGEILASGSMDNTVRLW 738
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDA-VTGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ + + S D+++++W +
Sbjct: 605 HDRVARLWATDHYQPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++ S G + TG+ D ++ +W + H L + L+ H V
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTV 714
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
+L S DG +L SG+ D ++ +WD
Sbjct: 715 CSLRFSRDGEILASGSMDNTVRLWD 739
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 224 LIYSVSWDKSLKIWR---ASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGSADRKIRVW 278
L S + D+S++IWR A + C+ H +V + S + TGS D +++W
Sbjct: 390 LFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Query: 279 AKP--FNEKRHA----LI-----ATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
P K A LI +T H +N+LA+S + +L +G+ DR+ +W
Sbjct: 450 PLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLW--- 506
Query: 328 DSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + G GH + + + +L + SAD T+++W D F CL EGH
Sbjct: 507 -ALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWAL-QD--FSCLKTFEGH 562
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV-SVSCPNSSPLNLQK-WNL 437
V + V+ Q ++S SGS DG ++ W + S C + + K W L
Sbjct: 563 DASVLKVAFVSRGAQ--LLS--SGS-DGLLKLWTIKSNECVRTLDAHEDKVWGL 611
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 30/104 (28%), Positives = 54/104 (51%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPF 282
++ + S D ++K+W D CL++ + H+ +V VA VS G + + +D +++W
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKS 594
Query: 283 NEKRHALIATLEKHKSAVNALALS--DDGTVLFSGACDRSILVW 324
NE + TL+ H+ V L S DD + +G D I++W
Sbjct: 595 NE----CVRTLDAHEDKVWGLHCSRLDDHAI--TGGSDSRIILW 632
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW-DVLNGN---C 662
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 718
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 719 RFSRDGEILASGSMDNTVRLW 739
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDA-VTGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ + + S D+++++W +
Sbjct: 606 HDRVARLWATDHYQPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 660
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++ S G + TG+ D ++ +W + H L + L+ H V
Sbjct: 661 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTV 715
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
+L S DG +L SG+ D ++ +WD
Sbjct: 716 CSLRFSRDGEILASGSMDNTVRLWD 740
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H VN V TGSADR +R+W N
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLW-DVLNGN---C 662
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++L S +G L +GA D +L+WD H ++ G L+GH + L
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTVCSL 718
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 719 RFSRDGEILASGSMDNTVRLW 739
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 27/107 (25%), Positives = 56/107 (52%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWA 279
N+ + + S D+++++W + C+ H+ ++++ S G + TG+ D ++ +W
Sbjct: 639 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW- 697
Query: 280 KPFNEKRHAL-IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
+ H L + L+ H V +L S DG +L SG+ D ++ +WD
Sbjct: 698 ----DIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
>UNIPROTKB|Q99973 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000722 "telomere maintenance via
recombination" evidence=IDA] [GO:0003720 "telomerase activity"
evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363 "nuclear matrix"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 CleanEx:HS_TEP1 EMBL:U86136
EMBL:BC126107 EMBL:BX640983 IPI:IPI00294519 IPI:IPI00413874
RefSeq:NP_009041.2 UniGene:Hs.508835 ProteinModelPortal:Q99973
SMR:Q99973 IntAct:Q99973 STRING:Q99973 PhosphoSite:Q99973
DMDM:215273899 PaxDb:Q99973 PRIDE:Q99973 Ensembl:ENST00000262715
GeneID:7011 KEGG:hsa:7011 UCSC:uc001vxe.3 CTD:7011
GeneCards:GC14M020833 H-InvDB:HIX0026646 HGNC:HGNC:11726
HPA:HPA029206 MIM:601686 neXtProt:NX_Q99973 PharmGKB:PA36443
HOGENOM:HOG000154545 HOVERGEN:HBG059633 InParanoid:Q99973 KO:K11127
OMA:SVPDAWK OrthoDB:EOG4001HG PhylomeDB:Q99973 ChiTaRS:TEP1
GenomeRNAi:7011 NextBio:27388 ArrayExpress:Q99973 Bgee:Q99973
Genevestigator:Q99973 GermOnline:ENSG00000129566 InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
Uniprot:Q99973
Length = 2627
Score = 179 (68.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 66/238 (27%), Positives = 105/238 (44%)
Query: 205 KKLWI--EHGDAVTGLAVNNGLIYSVSWDKSLKIW---------RASDLRCLESIKAHED 253
+ LW+ V GLA + L+ S S D ++++W +A D C ++ HE
Sbjct: 2003 QSLWLLSRFQKPVLGLATSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEG 2062
Query: 254 AVNAVAVSA-GGTVYTGSADRKIRVWAKPFNEKRHALIATLEK-HKSAVNALALSDDGTV 311
V+ + S GG++ TG DR + W K LI + H+ V A + D +
Sbjct: 2063 PVSCCSFSTDGGSLATGGRDRSLLCWDVR-TPKTPVLIHSFPACHRDWVTGCAWTKDN-L 2120
Query: 312 LFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQ-R 370
L S + D S+ +WD E S + G GH A+ + V ++S S D T+++W +
Sbjct: 2121 LISCSSDGSVGLWDPE-SGQRL---GQFLGHQSAVSAVAAVEEHVVSVSRDGTLKVWDHQ 2176
Query: 371 GSDGRFGCLAVLEGHTKPVKSLTAVTEE---GQNGV-VSVFSGSLDGEIRAWQVSVSC 424
G + L + H+ P+ A E GQ G + V + LDG R W + C
Sbjct: 2177 GVE-----LTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVC 2229
Score = 142 (55.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 214 AVTGLA-VNNGLIYSVSWDKSLKIWRASD--LRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
AV+ LA ++ ++ S + D SL+ W + L+ L + + V +A S + + S
Sbjct: 1971 AVSALAWLSPKVLVSGAEDGSLQGWALKECSLQSLWLLSRFQKPVLGLATSQE-LLASAS 2029
Query: 271 ADRKIRVWAKPFNEKRHAL----IAT-LEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
D +++W + + H T L H+ V+ + S DG L +G DRS+L WD
Sbjct: 2030 EDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWD 2089
Query: 326 REDSANHMVVTGALRGHGKAIL-CLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEG 384
+++ H + C LL+S S+D +V +W S R G G
Sbjct: 2090 VRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLISCSSDGSVGLWDPESGQRLGQFL---G 2146
Query: 385 HTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
H V ++ AV E VVSV S DG ++ W
Sbjct: 2147 HQSAVSAVAAVEEH----VVSV---SRDGTLKVW 2173
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 154 KIFTAHQDCKIRVW 167
++ TA +D K++VW
Sbjct: 1898 QLLTAGEDGKVQVW 1911
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 169 (64.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 54/184 (29%), Positives = 93/184 (50%)
Query: 213 DAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAG--GTVYTGS 270
+ +TG ++ +YS S D + +W A +L+ + +IKAH ++ AV G + T
Sbjct: 515 ECITGDSLR---LYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAG 571
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
AD ++ W N ++ I + K + VN + + D+ +L++G D+++ VWD +
Sbjct: 572 ADSLVKEW--DINTQQ--TIKEI-KESNEVNTIFIQDN--LLYTGCNDKTVKVWDMR--S 622
Query: 331 NHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
V T L GH +AI + + LL SGS D+ + +W + G L +GH VK
Sbjct: 623 YECVKT--LSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLAT-GTI--LTNFQGHEGWVK 677
Query: 391 SLTA 394
+L A
Sbjct: 678 TLYA 681
Score = 156 (60.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 44/161 (27%), Positives = 77/161 (47%)
Query: 211 HGDAVTGLAVNNGL---IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY 267
HG ++ + G I + D +K W + + ++ IK + VN + + +Y
Sbjct: 550 HGKSIRAVIKRPGFDQNILTAGADSLVKEWDINTQQTIKEIKESNE-VNTIFIQ-DNLLY 607
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
TG D+ ++VW + + + + TL H A+ ++ G +LFSG+ D+ I VW+
Sbjct: 608 TGCNDKTVKVW----DMRSYECVKTLSGHTRAIKSVCAM--GNLLFSGSNDQQIYVWNL- 660
Query: 328 DSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIW 368
A ++T +GH + L +L SGS D T+RIW
Sbjct: 661 --ATGTILTN-FQGHEGWVKTLYAHNNMLYSGSHDETIRIW 698
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/117 (25%), Positives = 63/117 (53%)
Query: 209 IEHGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
I+ + V + + + L+Y+ DK++K+W C++++ H A+ +V + G +++
Sbjct: 590 IKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSVC-AMGNLLFS 648
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
GS D++I VW N ++ + H+ V L ++ +L+SG+ D +I +WD
Sbjct: 649 GSNDQQIYVW----NLATGTILTNFQGHEGWVKTLYAHNN--MLYSGSHDETIRIWD 699
Score = 133 (51.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 295 KHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINVAG 354
K + VN + + D+ +L++G D+++ VWD + V T L GH +AI + +
Sbjct: 591 KESNEVNTIFIQDN--LLYTGCNDKTVKVWDMR--SYECVKT--LSGHTRAIKSVCAMGN 644
Query: 355 LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGE 414
LL SGS D+ + +W + G L +GH VK+L A N ++ +SGS D
Sbjct: 645 LLFSGSNDQQIYVWNLAT-GTI--LTNFQGHEGWVKTLYA-----HNNML--YSGSHDET 694
Query: 415 IRAWQVSVS-CPNS 427
IR W + + C N+
Sbjct: 695 IRIWDLKTTRCVNT 708
Score = 129 (50.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 266 VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSD--DGTVLFSGACDRSILV 323
+Y+GS D +I VW E +H + ++ H ++ A+ D +L +GA D +
Sbjct: 524 LYSGSNDGQIGVWDAV--ELKH--VTNIKAHGKSIRAVIKRPGFDQNILTAGA-DSLVKE 578
Query: 324 WDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLE 383
WD N ++ + I LL +G D+TV++W S + C+ L
Sbjct: 579 WD----INTQQTIKEIKESNEVNTIFIQ-DNLLYTGCNDKTVKVWDMRS---YECVKTLS 630
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
GHT+ +KS+ A+ G + +FSGS D +I W ++
Sbjct: 631 GHTRAIKSVCAM------GNL-LFSGSNDQQIYVWNLA 661
Score = 121 (47.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 211 HGDAVTGLAVNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGS 270
H V L +N ++YS S D++++IW RC+ +IK +D V + V+ G ++ GS
Sbjct: 672 HEGWVKTLYAHNNMLYSGSHDETIRIWDLKTTRCVNTIKC-KDRVETLHVTNQG-IFAGS 729
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
D W + F+ ++ +A+L S L L + LF+G+ ++ VW
Sbjct: 730 GD-----WLQVFSHDKYENLASLNTRSSI---LCLWRNQNQLFTGSLASNLKVW 775
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 101 IGCIAVHHNFLYAASSHE-INVYDRTGTTWTSINTFNDNDSSSGSVKSVTFCDGKIFTAH 159
+ I + N LY + + + V+D ++ + T + + + ++KSV +F+
Sbjct: 596 VNTIFIQDNLLYTGCNDKTVKVWDMR--SYECVKTLSGH---TRAIKSVCAMGNLLFSGS 650
Query: 160 QDCKIRVW 167
D +I VW
Sbjct: 651 NDQQIYVW 658
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 109 NFLYAASSHEINVYDRTG 126
+F Y S+HE+ + D G
Sbjct: 177 HFSYELSNHELLIVDIQG 194
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/202 (27%), Positives = 92/202 (45%)
Query: 224 LIYSVSWDKSLKIW-RASDL-RCLESIK-AHEDAVNAVAVS-AGGTVYTGSADRKIRVWA 279
L+ S D++++IW R D C ++ H+ V VA S G + + S D +W
Sbjct: 30 LLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
K N+ L LE H++ V +A + G +L + + D+S+ +W+ D N +
Sbjct: 90 KK-NDDFECL-TVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWE-VDEENEYECVSVV 146
Query: 340 RGHGKAILCLI--NVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
H + + ++ LL S S D V +++ D + C A LEGHT V LT
Sbjct: 147 NSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDD-WECRATLEGHTSTVWGLT-FDP 204
Query: 398 EGQNGVVSVFSGSLDGEIRAWQ 419
GQ + S S D ++ W+
Sbjct: 205 SGQR----LASCSDDCTVKIWK 222
Score = 145 (56.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 49/177 (27%), Positives = 78/177 (44%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ D CL ++ HE+ V VA +G + T S D+ + +W
Sbjct: 78 SASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ + H V + +L S + D ++ V+ ED T L GH
Sbjct: 137 ENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRAT--LEGHT 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIW--------QRGSDGRFGCLAVLEG-HTKPV 389
+ L + +G L S S D TV+IW Q G+D + C+ L G H + V
Sbjct: 195 STVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTV 251
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 242 LRCLESIKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSA 299
L L+ AH D+ VA + GT+ DR IR+W + + + H+
Sbjct: 5 LALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE-GDSWECKTVLQDGHQRT 63
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINV-AG-LLM 357
V +A S G L S + D + +W +++ + +T L GH + C+ +G LL
Sbjct: 64 VRKVAWSPCGNYLASASFDATTCIWKKKND-DFECLT-VLEGHENEVKCVAWAPSGNLLA 121
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ S D++V IW+ + + C++V+ HT+ VK
Sbjct: 122 TCSRDKSVWIWEVDEENEYECVSVVNSHTQDVK 154
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 119 INVYDRTGTTWTSINTFNDNDSSSGSVKSVTF--CDGKIFTAHQDCKIRVWQ 168
I ++ R G +W D + V+ V + C + +A D +W+
Sbjct: 40 IRIWGREGDSWECKTVLQDGHQRT--VRKVAWSPCGNYLASASFDATTCIWK 89
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 151 (58.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 190 RFMLPNSYVTVRRHKK-KLW-IEHGDAVTGLAVNNGLIYSVSW------------DKSLK 235
RF+ N +T LW IE G G A ++G + S+S D S+K
Sbjct: 50 RFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 109
Query: 236 IWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT-GSADRKIRVWAKPFNEKRHALIATLE 294
+W D C ++ HE +NAVA G +T GS D R++ + L+ + +
Sbjct: 110 LWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLF--DLRADQELLMYSHD 167
Query: 295 KHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL-INVA 353
+ ++A S G +L +G D + +WD G L GH + CL +
Sbjct: 168 NIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDD 223
Query: 354 GLLMS-GSADRTVRIW 368
G+ ++ GS D ++IW
Sbjct: 224 GMAVATGSWDSFLKIW 239
Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 53/204 (25%), Positives = 92/204 (45%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGG-TVYTGSADRKIRVWA 279
+N +I S S D + +W + H V +++++ G T +G+ D I++W
Sbjct: 54 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 112
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ R I H+S +NA+A +G +G+ D + ++D A+ ++ +
Sbjct: 113 VRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDLR--ADQELL---M 163
Query: 340 RGHGKAILCLINVA----G-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTA 394
H I + +VA G LL++G D IW R G LA GH V L
Sbjct: 164 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA---GHDNRVSCL-G 219
Query: 395 VTEEGQNGVVSVFSGSLDGEIRAW 418
VT++G ++V +GS D ++ W
Sbjct: 220 VTDDG----MAVATGSWDSFLKIW 239
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ ++W + L H V + TGSADR +R+W N
Sbjct: 586 DRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLW-DVLNGN---C 641
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
+ HK +++LA S +G L +GA D +L+WD H ++ G L+GH I L
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWD----IGHGLMVGELKGHTDTIYAL 697
Query: 350 -INVAG-LLMSGSADRTVRIW 368
+ G +L SGS D TVR+W
Sbjct: 698 RFSRDGEILASGSMDNTVRLW 718
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 185 NDRLLRFMLPNSYVTVRRHKKKLWIEH-GDAV-TGLAVNNGLIYSVSWDKSLKIWRASDL 242
+DR+ R + Y +R ++ H D T N+ I + S D+++++W +
Sbjct: 585 HDRVARLWATDHYQPLR-----IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNG 639
Query: 243 RCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL-IATLEKHKSAV 300
C+ H+ ++++A S G + TG+ D ++ +W + H L + L+ H +
Sbjct: 640 NCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLW-----DIGHGLMVGELKGHTDTI 694
Query: 301 NALALSDDGTVLFSGACDRSILVWD 325
AL S DG +L SG+ D ++ +WD
Sbjct: 695 YALRFSRDGEILASGSMDNTVRLWD 719
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 192 MLPNS-YVTVRRHKKKLWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESI 248
+ P+S Y ++ HK+ L H +V +A + I++ S D +KIW D R L ++
Sbjct: 161 VFPSSAYQHIKMHKRILG--HLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATL 218
Query: 249 KAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL-- 305
+ H ++ +AV+ T + GS D+ +RVW + A +A L+ H +++ ++
Sbjct: 219 RGHSAEISDMAVNYENTLIAAGSCDKVVRVWCL----RTCAPVAVLQGHSASITSIQFCP 274
Query: 306 SDDGTV--LFSGACDRSILVWD---REDSANHMVVTGALRGH-GKAILCLINVAG--LLM 357
S GT L S D +I W + V R G I C +G +
Sbjct: 275 STKGTTRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFIT 334
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
+GS D +RI+ GS+ +A LE HT V ++ G + + SGS DG R
Sbjct: 335 TGSTDHVIRIYYLGSEIPEK-IAELESHTDKVVAVQ-FCNNGDS--LRFVSGSRDGTARI 390
Query: 418 WQ 419
WQ
Sbjct: 391 WQ 392
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 192 MLPNS-YVTVRRHKKKLWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESI 248
+ P+S Y ++ HK+ L H +V +A + I++ S D +KIW D R L ++
Sbjct: 161 IFPSSAYQHIKMHKRILG--HLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATL 218
Query: 249 KAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL-- 305
+ H ++ +AV+ T + GS D+ +RVW + A +A L+ H +++ ++
Sbjct: 219 RGHSAEISDMAVNYENTLIAAGSCDKVVRVWCL----RTCAPVAVLQGHSASITSIQFCP 274
Query: 306 SDDGT--VLFSGACDRSILVWD---REDSANHMVVTGALRGH-GKAILCLINVAG--LLM 357
S GT L S D +I W + V R G I C +G +
Sbjct: 275 STKGTNRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFIT 334
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRA 417
+GS D +RI+ GS+ +A LE HT V ++ G + + SGS DG R
Sbjct: 335 TGSTDHVIRIYYLGSEVPEK-IAELESHTDKVVAVQ-FCNNGDS--LRFVSGSRDGTARI 390
Query: 418 WQ 419
WQ
Sbjct: 391 WQ 392
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 204 KKKLWIEH-GDAVTGLAVNN--GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV 260
+K +++ H GD ++ LAV+ L S + D S K+W + C ++ HE +NA+
Sbjct: 176 QKTVFVGHTGDCMS-LAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICF 234
Query: 261 SAGG-TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR 319
G + TGS D R++ + + + E + ++A S G +LF+G D
Sbjct: 235 FPNGEAICTGSDDASCRLF--DLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDF 292
Query: 320 SILVWDREDSANHMVVTGALRGHGKAILCL-INVAGLLMS-GSADRTVRIW 368
+ VWD S G L GH + CL + G+ ++ GS D ++IW
Sbjct: 293 NCNVWDSMKSER----VGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 62/234 (26%), Positives = 106/234 (45%)
Query: 224 LIYSVSWDKSLKIWR---ASDLRCLESIKAHEDAVNAVAVSA--GGTVYTGSADRKIRVW 278
L S + D+S++IWR A + C+ H +V V S + TGS D +++W
Sbjct: 390 LFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLW 449
Query: 279 AKP--FNEKRHA-------LIA-TLEK-HKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
P K A L A T ++ H +N++A++ + +L +G+ DR+ +W
Sbjct: 450 PLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLW--- 506
Query: 328 DSANHMVVTGALRGHGKAILCL--INVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ + G GH + + C+ + +L + SAD T+++W D F CL EGH
Sbjct: 507 -ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL-QD--FSCLKTFEGH 562
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSPLNLQK-WNL 437
V + V+ G + SGS DG ++ W + + C + + K W L
Sbjct: 563 DASVLKVAFVSR----GTQLLSSGS-DGLVKLWTIKNNECVRTLDAHEDKVWGL 611
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 224 LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPF 282
++ + S D ++K+W D CL++ + H+ +V VA VS G + + +D +++W
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKN 594
Query: 283 NEKRHALIATLEKHKSAVNALALS--DDGTVLFSGACDRSILVW 324
NE + TL+ H+ V L S DD + +GA D +++W
Sbjct: 595 NE----CVRTLDAHEDKVWGLHCSRLDDHAL--TGASDSRVILW 632
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/215 (30%), Positives = 107/215 (49%)
Query: 211 HGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H +VT ++V N I + S D ++KIW A R ++ H ++ V A G+ Y
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKW-ATGSKYL 111
Query: 269 GSA--DRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDR 326
SA D+ IR+W F EKR + + L+ H + V+++ + GT+L SG+ D ++ +W+
Sbjct: 112 ASASDDKTIRIW--DF-EKRCS-VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 327 EDSANHMVVTGALRGHGKAILCL-INVAGLLMS-GSADRTVRIWQRGSDGRFGCLAVL-E 383
+D L H + I+ + I+ G L + S D RIW S G+ CL L E
Sbjct: 168 QDGT----CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLS-GQ--CLKTLVE 220
Query: 384 GHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
P+ +L TE + +VS +L+ +IR W
Sbjct: 221 PINVPLSNLQ-FTENRKYLLVS----NLNSQIRLW 250
Score = 121 (47.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 211 HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY- 267
H + V+ + N L+ S SWD++++IW D CL + AH + + +V++SA GT+
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCA 196
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWD 325
T S D R+W + L+ E ++ L +++ L + I +WD
Sbjct: 197 TASYDGMARIWDVLSGQCLKTLV---EPINVPLSNLQFTENRKYLLVSNLNSQIRLWD 251
Score = 59 (25.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 81 NFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASSHEINVYDRTGTTWTSINTFNDNDS 140
N+ S S GH+ + C++V N + A+S D T W+++ TF +
Sbjct: 37 NYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSS----DGTIKIWSAL-TFRLECT 91
Query: 141 SSG---SVKSVTFCDGKIF--TAHQDCKIRVW 167
G + V + G + +A D IR+W
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDKTIRIW 123
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 175 (66.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 72/244 (29%), Positives = 112/244 (45%)
Query: 192 MLPNS-YVTVRRHKKKLWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESI 248
+ P S Y ++ HK+ L H +V +A + I++ S D +KIW D R L ++
Sbjct: 98 LFPTSTYQQMKMHKRILG--HLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTL 155
Query: 249 KAHEDAVNAVAVSAGGTVYT-GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSD 307
+ H ++ +AV+ T+ GS D+ +RVW + A +A L+ H +++ ++ S
Sbjct: 156 RGHSAEISDMAVNYENTLLAAGSCDKIVRVWCL----RTCAPVAVLQGHSASITSIQFSP 211
Query: 308 --DGTV--LFSGACDRSILVWDREDSANHMV-----VTGALRGH-GKAILCLINVAG--L 355
GT L S D +I W AN M V A R G I C +G
Sbjct: 212 ARKGTTRYLTSTGADGTICFWQWH--ANTMKFKDRPVKFAERSRPGVQISCSSFSSGGMF 269
Query: 356 LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEI 415
+ +GS D +RI+ GS+ +A LE HT V ++ G + + SGS DG
Sbjct: 270 IATGSTDHVIRIYYLGSESPEK-MAELESHTDKVVAVQ-FCNNGDS--LRFVSGSRDGTA 325
Query: 416 RAWQ 419
R WQ
Sbjct: 326 RVWQ 329
Score = 131 (51.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 47/187 (25%), Positives = 86/187 (45%)
Query: 248 IKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
I H +V +A G ++TGS D +++WA ++ R L++TL H + ++ +A++
Sbjct: 113 ILGHLSSVYCIAFDRSGRRIFTGSDDCLVKIWAT--DDGR--LLSTLRGHSAEISDMAVN 168
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI------NVAGLLMSGS 360
+ T+L +G+CD+ + VW A V L+GH +I + L S
Sbjct: 169 YENTLLAAGSCDKIVRVWCLRTCAPVAV----LQGHSASITSIQFSPARKGTTRYLTSTG 224
Query: 361 ADRTVRIWQ-RGSDGRFGCLAV-LEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
AD T+ WQ + +F V ++P ++ +G + + +GS D IR +
Sbjct: 225 ADGTICFWQWHANTMKFKDRPVKFAERSRPGVQISC--SSFSSGGMFIATGSTDHVIRIY 282
Query: 419 QVSVSCP 425
+ P
Sbjct: 283 YLGSESP 289
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 400 QNGVVSVFSGSLDGEIRAWQVSVSCPNSS 428
++ V S+D + WQ S +SS
Sbjct: 765 EDETVGTSDASVDDPVATWQSDSSSSDSS 793
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 58/213 (27%), Positives = 94/213 (44%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKA----HEDAVNAVA----VSAGGTVY--TGSADRK 274
I + S D + +WR ++ C I A H AV AV VS G + T S D
Sbjct: 403 IATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLT 462
Query: 275 IRVWA--KPFNEKRHALIATLE----KHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
I+ W KP +I E H+ +NAL++S + ++ + + D++ +W+ E+
Sbjct: 463 IKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLEN 522
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ RG C + LL + S D+TV+IW + F + LEGHT
Sbjct: 523 GELEATLANHKRGLWDVSFCQYDK--LLATSSGDKTVKIWSLDT---FSVMKTLEGHTNA 577
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
V+ + + ++ Q + S DG I+ W S
Sbjct: 578 VQRCSFINKQKQ-----LISCGADGLIKIWDCS 605
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 65/232 (28%), Positives = 110/232 (47%)
Query: 208 WIEHGDAVT--GLA--VNNG---LIYSVSWDKSLKIW-----RAS-DLRCLESIK----A 250
+I H AVT GL V+ G + + S D ++K W AS D++ ++ + A
Sbjct: 430 YIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHA 489
Query: 251 HEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
HE +NA++VS +++ T S D+ ++W N + L ATL HK + ++
Sbjct: 490 HEKDINALSVSPNDSIFATASYDKTCKIW----NLENGELEATLANHKRGLWDVSFCQYD 545
Query: 310 TVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAIL-C-LINVAGLLMSGSADRTVRI 367
+L + + D+++ +W S + V L GH A+ C IN L+S AD ++I
Sbjct: 546 KLLATSSGDKTVKIW----SLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKI 601
Query: 368 WQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
W S G CL L+GH + +L+ + + G + S DG + W+
Sbjct: 602 WDCSS-GE--CLKTLDGHNNRLWALSTMND-GD----MIVSADADGVFQFWK 645
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 153 (58.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 63/232 (27%), Positives = 100/232 (43%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVA-VSAGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW+ D CL ++ HE+ V VA +G + T S D+ + +W
Sbjct: 78 SASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVD-E 136
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
E + ++ + H V + +L S + D ++ V+ ED T L GH
Sbjct: 137 EDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRAT--LEGHT 194
Query: 344 KAILCL-INVAGL-LMSGSADRTVRIWQR-----GSDGRFGCLAVLEG-HTKPVKS---- 391
+ L + +G L S S DRTV+IW+ G D + C+ L G H + V
Sbjct: 195 STVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWC 254
Query: 392 -LTAV--TEEGQNGVVSVFSG--SLDGEIRAWQVSVSCP--NSSPLNLQKWN 436
LT T G +GV VF + D + + +S P +S +N W+
Sbjct: 255 PLTGALATACGDDGV-RVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWH 305
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 242 LRCLESIKAHEDA-VNAVAVSAGGTVYTG-SADRKIRVWAKPFNEKRHALIATLEKHKSA 299
L L+ AH D+ VA + GT+ DR IR+W + + + H+ A
Sbjct: 5 LALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGRE-GDSWECKTVLQDGHQRA 63
Query: 300 VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLINV-AG-LLM 357
V +A S G L S + D + +W +++ + +T L GH + C+ +G L
Sbjct: 64 VRKVAWSPCGNYLASASFDATTCIWKKKND-DFECLT-VLEGHENEVKCVAWAPSGNQLA 121
Query: 358 SGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+ S D++V IW+ + + C++V+ HT+ VK
Sbjct: 122 TCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVK 154
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 119 INVYDRTGTTWTSINTFNDNDSSSGSVKSVTF--CDGKIFTAHQDCKIRVWQ 168
I ++ R G +W D + V+ V + C + +A D +W+
Sbjct: 40 IRIWGREGDSWECKTVLQDGHQRA--VRKVAWSPCGNYLASASFDATTCIWK 89
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/198 (27%), Positives = 88/198 (44%)
Query: 211 HGDAVTGLA---VNNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-V 266
HG+A+ + V++ + S S D + +IW L ++K H V AV+ S G +
Sbjct: 147 HGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMI 206
Query: 267 YTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALA-----LSDDGTV-LFSGACDRS 320
TGS D +R+W +K AL A L+ H + +LA L G L S + D +
Sbjct: 207 ATGSMDNTVRIWDA---KKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 321 ILVWDREDSANHMVVTGALRGHGKAILCLI-NVAGLLMSGSADRTVRIWQRGSDGRFGCL 379
+ +WD +V L GH ++ C+ G + + S DRT+++W G +
Sbjct: 264 VRIWDVISKRADIV----LSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWN-SQTGTL--I 316
Query: 380 AVLEGHTKPVKSLTAVTE 397
L H V L T+
Sbjct: 317 QTLSAHAHRVNHLALSTD 334
Score = 156 (60.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 56/192 (29%), Positives = 84/192 (43%)
Query: 227 SVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPFNEKR 286
S S D +++IW R + H+ +V V G +YT S DR I+VW N +
Sbjct: 257 SASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVW----NSQT 312
Query: 287 HALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI 346
LI TL H VN LALS D +L + D + V E A+ + + A + KA
Sbjct: 313 GTLIQTLSAHAHRVNHLALSTD-FILRTAYHDHTGKV--PESDADKVAM--AKKRFEKAA 367
Query: 347 LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+ L+S S D T+ +W S + +A L GH K V +T + + +
Sbjct: 368 TINNKIVEKLVSASDDFTMYLWDPESSSK--PVARLLGHQKEVNHVTFSPD-----MAYI 420
Query: 407 FSGSLDGEIRAW 418
S D ++ W
Sbjct: 421 ASAGFDNHVKLW 432
Score = 155 (59.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 57/186 (30%), Positives = 85/186 (45%)
Query: 243 RCLESIKAHEDAVNAVAVS--AGGTVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAV 300
RC SI H +A+ A + S + T+ +GS D R+W H TL+ H S V
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLH----TLKGHTSWV 194
Query: 301 NALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL------INVAG 354
A++ S +G ++ +G+ D ++ +WD + + L+GH K I L + +G
Sbjct: 195 LAVSYSPNGAMIATGSMDNTVRIWDAKKG---QALGAPLKGHVKWITSLAWEPYHLQQSG 251
Query: 355 --LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLD 412
L S S D TVRIW S R VL GH S+T V G +++ S D
Sbjct: 252 HPRLASASKDSTVRIWDVISK-RADI--VLSGHKG---SVTCVR---WGGTGKIYTSSHD 302
Query: 413 GEIRAW 418
I+ W
Sbjct: 303 RTIKVW 308
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/201 (24%), Positives = 86/201 (42%)
Query: 223 GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKPF 282
G IY+ S D+++K+W + ++++ AH VN +A+S + T D +V P
Sbjct: 294 GKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKV---PE 350
Query: 283 NEKRHALIATLEKHKSA-VNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
++ +A K+A +N + L S + D ++ +WD E S+ + L G
Sbjct: 351 SDADKVAMAKKRFEKAATINNKIVEK----LVSASDDFTMYLWDPESSSKPVA---RLLG 403
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEG 399
H K + + + S D V++W G DG+F + L GH V +
Sbjct: 404 HQKEVNHVTFSPDMAYIASAGFDNHVKLWN-GRDGKF--ITTLRGHVGAVYQCCFSADSR 460
Query: 400 QNGVVSVFSGSLDGEIRAWQV 420
+ S S D ++ W V
Sbjct: 461 L-----LVSSSKDTTLKVWNV 476
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 69/269 (25%), Positives = 105/269 (39%)
Query: 123 DRTGTTWTSINTFNDNDSSS--GSVKSVTFCD-GKIFTAHQDCKIRVWQXXXXXXXXXXX 179
D T W I+ D S GSV V + GKI+T+ D I+VW
Sbjct: 261 DSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLS 320
Query: 180 XXXX-VNDRLLR--FMLPNSYVTVRRHKKKLWIEHGDAVT--------GLAVNNGLI--- 225
VN L F+L +Y H K+ D V +NN ++
Sbjct: 321 AHAHRVNHLALSTDFILRTAY---HDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKL 377
Query: 226 YSVSWDKSLKIWRA-SDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA--DRKIRVWAKPF 282
S S D ++ +W S + + + H+ VN V S Y SA D +++W
Sbjct: 378 VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPD-MAYIASAGFDNHVKLW---- 432
Query: 283 NEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGH 342
N + I TL H AV S D +L S + D ++ VW+ ++ L GH
Sbjct: 433 NGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGK----LSEDLPGH 488
Query: 343 GKAILCLI-NVAGLLM-SGSADRTVRIWQ 369
+ + + G + SG D+ +RIW+
Sbjct: 489 KDEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 66/274 (24%), Positives = 109/274 (39%)
Query: 69 PSLQKLSPDETINFSSASHLCINSVQLGHKLPIGCIAVHHNFLYAASSHE--INVYD-RT 125
P L S D T+ + V GHK + C+ SSH+ I V++ +T
Sbjct: 253 PRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQT 312
Query: 126 GTTWTSINTF----NDNDSSSGSVKSVTFCD--GKIFTAHQD----CKIRVWQXXXXXXX 175
GT +++ N S+ + + D GK+ + D K R +
Sbjct: 313 GTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNK 372
Query: 176 XXXXXXXXVNDRLLRFMLP-NSYVTVRR---HKKKLWIEHGDAVTGLAVNNGLIYSVSWD 231
+D + P +S V R H+K+ + H VT + + I S +D
Sbjct: 373 IVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKE--VNH---VT-FSPDMAYIASAGFD 426
Query: 232 KSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALI 290
+K+W D + + +++ H AV SA + S+ D ++VW N + L
Sbjct: 427 NHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVW----NVRTGKLS 482
Query: 291 ATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
L HK V A+ S DG + SG D++I +W
Sbjct: 483 EDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 291 ATLEKHKSAVNALALSD-DGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
A++ H A+ A + S + + SG+ D + +WD D+ + L+GH +L +
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDC-DTGTPL---HTLKGHTSWVLAV 197
Query: 350 -INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE-GQNGVVSV 406
+ G ++ +GS D TVRIW G A L+GH K + SL Q+G +
Sbjct: 198 SYSPNGAMIATGSMDNTVRIWDAKKGQALG--APLKGHVKWITSLAWEPYHLQQSGHPRL 255
Query: 407 FSGSLDGEIRAWQV 420
S S D +R W V
Sbjct: 256 ASASKDSTVRIWDV 269
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/196 (28%), Positives = 92/196 (46%)
Query: 211 HGDAVTGLAVN-NGL-IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VY 267
HG+ V + +G + S S D++++IW L + K+H+ V +A S T +
Sbjct: 104 HGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIA 163
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALA---LSDDGTVLFSGAC--DRSIL 322
+ + +I +W E+ + TL++HK + +LA + D T +C D +I
Sbjct: 164 SACKNGEICIWNAKTGEQ---IGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIF 220
Query: 323 VWDREDSANHMVVTGALRGHGKAILCLI-NVAGLLMSGSADRTVRIWQRGSDGRFGCLAV 381
+WD V L GH ++ CL GL+ SGS DRTV++W R DG C
Sbjct: 221 IWDTVQGT----VVRCLSGHTASVTCLRWGGEGLIYSGSQDRTVKMW-RADDGVM-CRN- 273
Query: 382 LEGHTKPVKSLTAVTE 397
+ GH + +L T+
Sbjct: 274 MTGHAHWINTLALNTD 289
Score = 135 (52.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 52/213 (24%), Positives = 103/213 (48%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTG 269
H +VT L GLIYS S D+++K+WRA D ++ H +N +A++ + T
Sbjct: 236 HTASVTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTS 295
Query: 270 SADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDS 329
+ R KP + +A ++++A+ G L SG+ D ++ +W+ +++
Sbjct: 296 CFEPSKRC-IKPDTVEECQKVAQT-RYEAALEIAG----GERLVSGSDDFTLFMWNPKET 349
Query: 330 ANHMVVTGALRGHGKAILCLINVAGL--LMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
+ + GH + + ++ + S S D++V++W G G++ LA L GH
Sbjct: 350 KQSI---NRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWC-GRTGKY--LASLRGHVG 403
Query: 388 PVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQV 420
PV + A + + + + SGS D ++ +++
Sbjct: 404 PVYQV-AWSADSR----LLVSGSADSTLKVFEL 431
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 225 IYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
I S S+DKS+K+W + L S++ H V VA SA + +GSAD ++V F
Sbjct: 375 IASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKV----FE 430
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVW 324
K +L L H V + S +GT + SG D+ + +W
Sbjct: 431 LKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
>TAIR|locus:2082891 [details] [associations]
symbol:RID3 "AT3G49180" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL132956 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 UniGene:At.46259 UniGene:At.48755
UniGene:At.72728 EMBL:BT004624 EMBL:AK227986 IPI:IPI00544514
PIR:T45823 RefSeq:NP_190487.1 ProteinModelPortal:Q9M3B4 SMR:Q9M3B4
IntAct:Q9M3B4 STRING:Q9M3B4 PRIDE:Q9M3B4 DNASU:824079
EnsemblPlants:AT3G49180.1 GeneID:824079 KEGG:ath:AT3G49180
TAIR:At3g49180 InParanoid:Q9M3B4 OMA:SEDRTCK PhylomeDB:Q9M3B4
ProtClustDB:CLSN2684231 Genevestigator:Q9M3B4 Uniprot:Q9M3B4
Length = 438
Score = 160 (61.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 56/203 (27%), Positives = 99/203 (48%)
Query: 210 EHGDAVTGLAVN----NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT 265
EH +VT + ++ N +I S S D++ K+W S + L++I +NA+A+ GG
Sbjct: 171 EHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI-IFPSVINALALDPGGC 229
Query: 266 V-YTGSADRKIRVWA-KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILV 323
V Y G+ D KI + A +E ++ ++ + A+ LA DG +L SG+ D + V
Sbjct: 230 VFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCV 289
Query: 324 WDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLE 383
WD + S H+ +G K + I + + ++++T W+ S G LE
Sbjct: 290 WDPK-SLRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWK--SRGAL-IPPPLE 345
Query: 384 GHTKPVKSLTAVTEEGQNGVVSV 406
+ +PV E+ +G+V+V
Sbjct: 346 KYERPV-------EDTMDGIVTV 361
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/210 (28%), Positives = 93/210 (44%)
Query: 206 KLWIEHGDAVTGLAVN--NGLIYSVSWDKSLKIWRA----SDLRCLE-------SIKAHE 252
K W H +VT L + + L+ S S D S+++W D + + + H
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 253 DAVNAVAVSAGG---TVYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDG 309
+V + + GG + + S DR +VW+ R L+ + S +NALAL G
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVWSL----SRGKLLKNII-FPSVINALALDPGG 228
Query: 310 TVLFSGACDRSILVWDREDSANHMV-VTGALRGHGKAILCLINVA--GLLMSGSADRTVR 366
V ++GA D I + ++ + V G++ GKAI CL A LL+SGS D V
Sbjct: 229 CVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVC 288
Query: 367 IWQRGSDGRFGCLAVLEGHTK-PVKSLTAV 395
+W S L +G K PV ++ V
Sbjct: 289 VWDPKSLRHVRTLIHAKGSRKGPVNNIQIV 318
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 144 SVKSVTFC--DGKIFTAHQDCKIRVW 167
SV + F D + + QD IRVW
Sbjct: 122 SVTCLVFSGDDSLLVSGSQDGSIRVW 147
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 221 NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSA-GGTVYTGSADRKIRVWA 279
++ L+ S S DK+LKIW S +CL+++K H + V + + +GS D +R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 156
Query: 280 KPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGAL 339
+ K + TL H V+A+ + DG+++ S + D +WD ++ + T
Sbjct: 157 ---DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLID 211
Query: 340 RGHGKAILCLINVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEE 398
+ + G +++ + D T+++W S G+ CL H + A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGK--CLKTYTCHKNEKYCIFA--NF 266
Query: 399 GQNGVVSVFSGSLDGEIRAWQV 420
G + SGS D + W +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNL 288
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 211 HGDAVTGLAVN-NG-LIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV+ + + NG + S S DK +KIW A D + ++I H+ ++ VA S+ +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 269 GSADRK-IRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
++D K +++W + + TL+ H + V + ++ SG+ D S+ +WD +
Sbjct: 104 SASDDKTLKIW----DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 328 DSANHMVVTGALRGHGKAILCL-INVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ T L H + + N G L++S S D RIW S G+ CL L
Sbjct: 160 --TGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQ--CLKTLIDD 212
Query: 386 TKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
P S + G+ + + +LD ++ W S
Sbjct: 213 DNPPVSFVKFSPNGKY----ILAATLDNTLKLWDYS 244
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 55/202 (27%), Positives = 93/202 (46%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAK 280
+ LI S S+D+S++IW +CL+++ AH D V+AV + G++ S+ D R+W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 281 PFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR 340
+ LI + V+ + S +G + + D ++ +WD S + T
Sbjct: 201 ASGQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY--SKGKCLKTYTCH 255
Query: 341 GHGK-AILCLINVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
+ K I +V G ++SGS D V IW + + L+GHT V S TA
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---VVQKLQGHTDVVIS-TAC-H 310
Query: 398 EGQNGVVSVFSGSLDGEIRAWQ 419
+N + S + D I+ W+
Sbjct: 311 PTENIIASAALEN-DKTIKLWK 331
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/153 (29%), Positives = 71/153 (46%)
Query: 279 AKPFNEK-RHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTG 337
+KP K + L TL H AV+++ S +G L S + D+ I +W D ++G
Sbjct: 26 SKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 85
Query: 338 ALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTE 397
G + + + LL+S S D+T++IW S G+ CL L+GH+ V
Sbjct: 86 HKLGISD--VAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYV---FCCNF 137
Query: 398 EGQNGVVSVFSGSLDGEIRAWQVSVS-CPNSSP 429
Q+ ++ SGS D +R W V C + P
Sbjct: 138 NPQSNLI--VSGSFDESVRIWDVKTGKCLKTLP 168
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 247 SIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL 305
+++ H+ + VA G V+ D+ IRVW+ N I + + HK + +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILS-DGHKRTIREIRW 67
Query: 306 SDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI--NVAGLLMSGSADR 363
S G L S + D + +W + S+ L GH + + GLL + S D+
Sbjct: 68 SPCGQYLASASFDATTAIWSK--SSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDK 125
Query: 364 TVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+V IW+ D F C AVL HT+ VK
Sbjct: 126 SVWIWEVAGDDEFECAAVLNAHTQDVK 152
Score = 126 (49.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW S + C +++ HE+ V +V+ S +GG + T S D+ + +W +
Sbjct: 76 SASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW-EVAG 134
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
+ A L H V + +L S + D +I ++ + T L H
Sbjct: 135 DDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHT 194
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQ 369
+ + + G L+S S D+T++IW+
Sbjct: 195 STVWSIDFDAEGDRLVSCSDDKTLKIWR 222
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 44/133 (33%), Positives = 60/133 (45%)
Query: 292 TLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR-GHGKAILCLI 350
TL+ HK + +A G V S D++I VW S N L GH + I +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSL--SGNTWSTKTILSDGHKRTIREIR 66
Query: 351 -NVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
+ G L S S D T IW + S G F C A LEGH VKS V+ G+++ S
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKS---VSWSRSGGLLATCS 122
Query: 409 GSLDGEIRAWQVS 421
D + W+V+
Sbjct: 123 R--DKSVWIWEVA 133
Score = 116 (45.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 53/221 (23%), Positives = 93/221 (42%)
Query: 221 NNGLIYSVSWDKSLKIWRAS---DLRCLESIKAH-EDAVNAVAVSAGGTVYTGSADRKIR 276
+ GL+ + S DKS+ IW + + C + AH +D V + + S D I+
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIK 173
Query: 277 VWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHM-VV 335
++A+ + ATL H S V ++ +G L S + D+++ +W N +
Sbjct: 174 MFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIA 233
Query: 336 TG----------ALRG-HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVL 382
T L G H +AI + + GL+ +G D +RI++ SD +
Sbjct: 234 TPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFE 293
Query: 383 EGHTKPVKSLTAVTEEGQNGVVS--VFSGSLDGEIRAWQVS 421
+ + V N V+ + S S DG I+ W+V+
Sbjct: 294 QLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVA 334
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 96 GHKLPIGCIAVHHNFLYAASSHE---INVYDRTGTTWTSINTFNDNDSSSGSVKSVTF-- 150
GHK I +A H AS E I V+ +G TW++ +D + ++ + +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRT--IREIRWSP 69
Query: 151 CDGKIFTAHQDCKIRVW 167
C + +A D +W
Sbjct: 70 CGQYLASASFDATTAIW 86
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 247 SIKAHEDAVNAVAVSAGGTVYTGSA-DRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL 305
+++ H+ + VA G V+ D+ IRVW+ N I + + HK + +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILS-DGHKRTIREIRW 67
Query: 306 SDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCLI--NVAGLLMSGSADR 363
S G L S + D + +W + S+ L GH + + GLL + S D+
Sbjct: 68 SPCGQYLASASFDATTAIWSK--SSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDK 125
Query: 364 TVRIWQRGSDGRFGCLAVLEGHTKPVK 390
+V IW+ D F C AVL HT+ VK
Sbjct: 126 SVWIWEVAGDDEFECAAVLNAHTQDVK 152
Score = 126 (49.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 227 SVSWDKSLKIWRAS--DLRCLESIKAHEDAVNAVAVS-AGGTVYTGSADRKIRVWAKPFN 283
S S+D + IW S + C +++ HE+ V +V+ S +GG + T S D+ + +W +
Sbjct: 76 SASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW-EVAG 134
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHG 343
+ A L H V + +L S + D +I ++ + T L H
Sbjct: 135 DDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHT 194
Query: 344 KAILCL-INVAG-LLMSGSADRTVRIWQ 369
+ + + G L+S S D+T++IW+
Sbjct: 195 STVWSIDFDAEGDRLVSCSDDKTLKIWR 222
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 44/133 (33%), Positives = 60/133 (45%)
Query: 292 TLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALR-GHGKAILCLI 350
TL+ HK + +A G V S D++I VW S N L GH + I +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSL--SGNTWSTKTILSDGHKRTIREIR 66
Query: 351 -NVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFS 408
+ G L S S D T IW + S G F C A LEGH VKS V+ G+++ S
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKS---VSWSRSGGLLATCS 122
Query: 409 GSLDGEIRAWQVS 421
D + W+V+
Sbjct: 123 R--DKSVWIWEVA 133
Score = 115 (45.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 53/220 (24%), Positives = 92/220 (41%)
Query: 221 NNGLIYSVSWDKSLKIWRAS---DLRCLESIKAH-EDAVNAVAVSAGGTVYTGSADRKIR 276
+ GL+ + S DKS+ IW + + C + AH +D V + + S D I+
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIK 173
Query: 277 VWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHM-VV 335
++A+ + ATL H S V ++ +G L S + D+++ +W N +
Sbjct: 174 MFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIA 233
Query: 336 TG----------ALRG-HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVL 382
T L G H +AI + + GL+ +G D +RI++ SD +
Sbjct: 234 TPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFE 293
Query: 383 EGHTKPVKSLTAVTEEGQNGVVS--VFSGSLDGEIRAWQV 420
+ + V N V+ + S S DG I+ W+V
Sbjct: 294 QLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 96 GHKLPIGCIAVHHNFLYAASSHE---INVYDRTGTTWTSINTFNDNDSSSGSVKSVTF-- 150
GHK I +A H AS E I V+ +G TW++ +D + ++ + +
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRT--IREIRWSP 69
Query: 151 CDGKIFTAHQDCKIRVW 167
C + +A D +W
Sbjct: 70 CGQYLASASFDATTAIW 86
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 231 DKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHAL 289
D+ +KIW + + S+ H V VAVS +++ DR+++ W +N+ +
Sbjct: 193 DRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNK----V 248
Query: 290 IATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILCL 349
I H SAV +LAL VL + D + +WD AN V T L GH + +
Sbjct: 249 IRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKAN--VHT--LTGHTNTVASV 304
Query: 350 INVAG--LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSL 392
+ A +++GS D TVR+W + G+ C L H K V+S+
Sbjct: 305 VAQATNPQIITGSHDSTVRLWDLAA-GKSVC--TLTNHKKSVRSI 346
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 52/177 (29%), Positives = 74/177 (41%)
Query: 248 IKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALS 306
I H V +AV G + TG+ DR I++W + L +L H S V +A+S
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGK----LKLSLTGHVSTVRGVAVS 223
Query: 307 DDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAI--LCLINVAGLLMSGSADRT 364
LFS DR + WD E + V GH A+ L L +L + D T
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLE----YNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDST 279
Query: 365 VRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
RIW + + L GHT V S+ A Q + +GS D +R W ++
Sbjct: 280 ARIWDMRTKAN---VHTLTGHTNTVASVVAQATNPQ-----IITGSHDSTVRLWDLA 328
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/220 (25%), Positives = 98/220 (44%)
Query: 204 KKKLWIE-HGDAVTGLAVN--NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV 260
K KL + H V G+AV+ + ++S D+ +K W + + H AV ++A+
Sbjct: 205 KLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLAL 264
Query: 261 SAGGTVY-TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDR 319
V T D R+W + + A + TL H + V ++ + +G+ D
Sbjct: 265 HPTIDVLATSGRDSTARIW----DMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDS 320
Query: 320 SILVWDREDSANHMVVTGALRGHGKAILCLINVAGLLMSGSADR-TVRIWQRGSDGRFGC 378
++ +WD +A V T L H K++ ++ L M SA ++ W R +G+F
Sbjct: 321 TVRLWDL--AAGKSVCT--LTNHKKSVRSIVLHPSLYMFASASPDNIKQW-RCPEGKF-- 373
Query: 379 LAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAW 418
+ + GHT V + A +E GV+ SG +G + W
Sbjct: 374 VQNISGHTSIVNCMAANSE----GVL--VSGGDNGTMFFW 407
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/170 (30%), Positives = 84/170 (49%)
Query: 227 SVSWDKSLKIW--RASDLRCLESIKAHEDAVNAVAVSAGGTVY-TGSADRKIRVWAKPFN 283
S S+D ++ IW R+ + C +++ HE+ V +V+ S G + T S D+ + +W +
Sbjct: 77 SASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIW-EVAQ 135
Query: 284 EKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVT-GALRGH 342
E + A L H V + + VL S + D +I ++ RED A+ + L H
Sbjct: 136 EDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLY-REDLADSDWSSFDTLASH 194
Query: 343 GKAILCL-INVAGL-LMSGSADRTVRIWQRGSDGR-FGCLAVLEGHTKPV 389
+ + + +G L S S D+TVRIWQ G FG +A +G T PV
Sbjct: 195 DSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEFG-VACPDGKT-PV 242
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 268 TGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRE 327
T D+ IR+WA + + H + +A S G L S + D ++ +WDR
Sbjct: 31 TCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRR 90
Query: 328 DSANHMVVTGALRGHGKAILCLI-NVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGH 385
+ L GH + + + +G LL + S D++V IW+ + + C AVL H
Sbjct: 91 --SGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTH 148
Query: 386 TKPVKSL 392
++ VK +
Sbjct: 149 SQDVKKV 155
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 289 LIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRGHGKAILC 348
L+ L H+ V VL + D++I +W + + + T GH + I
Sbjct: 6 LLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRD 65
Query: 349 LI-NVAG-LLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSV 406
+ + G L S S D TV IW R S G F C A LEGH VKS++ ++G + +
Sbjct: 66 VAWSPCGRFLASASFDATVAIWDRRS-GEFECNATLEGHENEVKSVSW----SKSGAL-L 119
Query: 407 FSGSLDGEIRAWQVS 421
+ S D + W+V+
Sbjct: 120 ATCSRDKSVWIWEVA 134
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 68/240 (28%), Positives = 109/240 (45%)
Query: 194 PNS-YVTVRRHKKKLWIEHGDAVTGLAVNNG--LIYSVSWDKSLKIWRASDLRCLESIKA 250
P+S Y ++ HK+ L H +V +A + I++ S D +KIW D R L +++
Sbjct: 163 PSSAYQHIKMHKRILG--HLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRG 220
Query: 251 HEDAVNAVAVSAGGT-VYTGSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALAL--SD 307
H ++ +AV+ T + GS D+ +RVW + A +A L+ H +++ ++ S
Sbjct: 221 HSAEISDMAVNYENTLIAAGSCDKVVRVWCL----RTCAPVAVLQGHSASITSIQFCPST 276
Query: 308 DGTV--LFSGACDRSILVWD---REDSANHMVVTGALRGH-GKAILCLINVAG--LLMSG 359
GT L S D +I W + V R G I C +G + +G
Sbjct: 277 KGTTRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTG 336
Query: 360 SADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQ 419
S D +RI+ GS+ +A LE HT V + G++ + SGS DG R WQ
Sbjct: 337 STDHVIRIYYLGSEIPEK-IAELESHTDKVVAXQXCXN-GKS--LRFVSGSRDGTARIWQ 392
>UNIPROTKB|E2RI74 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AAEX03007920 Ensembl:ENSCAFT00000002660
Uniprot:E2RI74
Length = 800
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 59/216 (27%), Positives = 100/216 (46%)
Query: 223 GLIYSVSWDKSLKIWRASDLRC------LESIKAHEDAVNAVAVSAGGTVY------TGS 270
G SVS D++ ++W D R + + H + V+ V + +Y TG
Sbjct: 32 GAFVSVSRDRTTRLW-VPDSRPNRGFTEMHCMSGHSNFVSCVCIIPSSDMYPHGLIATGG 90
Query: 271 ADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSA 330
D I + F+ + A + L+ HK+ V +L+ GT+L SG+ D + VW D
Sbjct: 91 NDHNICI----FSLESPAPLYILKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LNDKC 144
Query: 331 NHMVVTGALRGHGKAILC--LINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
++T L+GH A+ ++ GL+++GSAD+T+++W+ G C GH
Sbjct: 145 ---MMT--LQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGR-----CERTFSGHEDC 194
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVSVSC 424
V+ L ++E S + D IR WQ++ C
Sbjct: 195 VRGLAILSE------AEFLSCANDASIRRWQITGEC 224
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 59/213 (27%), Positives = 95/213 (44%)
Query: 211 HGDAVTGLAVNN-GLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAV-SAGGTVYT 268
H + V L+ G + S SWD + K+W +D +C+ +++ H AV AV + G + T
Sbjct: 112 HKNTVCSLSSGKFGTLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQGLMLT 169
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
GSAD+ I++W E+ T H+ V LA+ + L S A D SI W +
Sbjct: 170 GSADKTIKLWKAGRCER------TFSGHEDCVRGLAILSEAEFL-SCANDASIRRW--QI 220
Query: 329 SANHMVVTGALRGHGKAILCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKP 388
+ + V + +I N + + DR++RIW+ G C + P
Sbjct: 221 TGECLEVYYGHTNYIYSISVFPNCRDFVTTAE-DRSLRIWKHGE-----CAQTIR---LP 271
Query: 389 VKSLTAVTEEGQNGVVSVFSGSLDGEIRAWQVS 421
+S+ NG + V G+ DG IR + S
Sbjct: 272 AQSIWCCCVL-DNGDIVV--GASDGIIRVFTES 301
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/174 (27%), Positives = 86/174 (49%)
Query: 222 NGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYTGSADRKIRVWAKP 281
+GLI + D ++ I+ L +K H++ V +++ GT+ +GS D +VW
Sbjct: 83 HGLIATGGNDHNICIFSLESPAPLYILKGHKNTVCSLSSGKFGTLLSGSWDTTAKVW--- 139
Query: 282 FNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDREDSANHMVVTGALRG 341
N+K + TL+ H +AV A+ + + ++ +G+ D++I +W A T G
Sbjct: 140 LNDK---CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW----KAGRCERT--FSG 190
Query: 342 HGKAI--LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTKPVKSLT 393
H + L +++ A L S + D ++R WQ + CL V GHT + S++
Sbjct: 191 HEDCVRGLAILSEAEFL-SCANDASIRRWQITGE----CLEVYYGHTNYIYSIS 239
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 42/198 (21%), Positives = 87/198 (43%)
Query: 211 HGDAVTGLAV--NNGLIYSVSWDKSLKIWRASDLRCLESIKAHEDAVNAVAVSAGGTVYT 268
H AV + + GL+ + S DK++K+W+A RC + HED V +A+ + +
Sbjct: 151 HTAAVWAVKILPEQGLMLTGSADKTIKLWKAG--RCERTFSGHEDCVRGLAILSEAEFLS 208
Query: 269 GSADRKIRVWAKPFNEKRHALIATLEKHKSAVNALALSDDGTVLFSGACDRSILVWDRED 328
+ D IR W + + H + + ++++ + + A DRS+ +W +
Sbjct: 209 CANDASIRRW-----QITGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGE 263
Query: 329 SANHMVVTGALRGHGKAI-LCLINVAGLLMSGSADRTVRIWQRGSDGRFGCLAVLEGHTK 387
A +R ++I C + G ++ G++D +R++ D R ++ K
Sbjct: 264 CAQ------TIRLPAQSIWCCCVLDNGDIVVGASDGIIRVFTESED-RIASAEEIKAFEK 316
Query: 388 PVKSLTAVTEEGQNGVVS 405
+ T ++ G G ++
Sbjct: 317 ELSQATIDSKTGDLGDIN 334
WARNING: HSPs involving 550 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 395 0.00096 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 800
No. of states in DFA: 624 (66 KB)
Total size of DFA: 282 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.74u 0.18s 32.92t Elapsed: 00:00:01
Total cpu time: 32.84u 0.18s 33.02t Elapsed: 00:00:01
Start: Sat May 11 15:45:25 2013 End: Sat May 11 15:45:26 2013
WARNINGS ISSUED: 2