Query 013718
Match_columns 437
No_of_seqs 144 out of 1315
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 15:49:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.7 1E-15 3.4E-20 153.0 19.7 294 36-345 6-306 (445)
2 3gia_A Uncharacterized protein 99.6 5E-14 1.7E-18 140.6 18.9 361 36-420 4-381 (444)
3 4djk_A Probable glutamate/gamm 99.3 6E-11 2.1E-15 120.4 21.3 295 35-346 8-322 (511)
4 2jln_A MHP1; hydantoin, transp 98.6 1E-05 3.4E-10 81.4 22.9 335 37-396 24-377 (501)
5 3dh4_A Sodium/glucose cotransp 97.7 0.0013 4.3E-08 66.6 17.7 151 35-199 17-169 (530)
6 2xq2_A Sodium/glucose cotransp 97.1 0.037 1.3E-06 56.6 20.1 149 36-198 47-197 (593)
7 2a65_A Leutaa, Na(+):neurotran 85.8 29 0.001 34.3 26.6 32 40-71 9-41 (519)
8 4ain_A Glycine betaine transpo 42.0 62 0.0021 32.0 7.5 118 36-155 92-230 (539)
9 4b4a_A TATC, SEC-independent p 17.4 5E+02 0.017 22.5 9.5 25 309-333 146-170 (249)
10 2wsw_A BCCT family betaine/car 16.1 7.6E+02 0.026 24.1 12.9 160 36-199 87-273 (509)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.69 E-value=1e-15 Score=152.96 Aligned_cols=294 Identities=15% Similarity=0.091 Sum_probs=183.4
Q ss_pred ccCCCchhhHHHHhhhcccccccchHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHcchhCCCccccCHHHHHHHHhC
Q 013718 36 SSRNAKWWYSAFHNVTAMVGAGVLSLPYAMAQLGWGPGVAILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFG 115 (437)
Q Consensus 36 ~~~~~s~~~~~~~l~~~~iG~GiL~LP~~f~~~G~~~g~i~l~~~~~~~~~t~~~l~~~~~~~~~~~~~~y~~l~~~~~G 115 (437)
.+|+.+.++..+..+++++|+|++.+|...++.|- .+++..++.+++.......+.|...+.|+.. +..+..++.+|
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~-~~~~~~li~~~~~~~~a~~~~el~~~~p~~G--g~y~~~~~~~G 82 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG-IAIYGWLVTIIGALGLSMVYAKMSFLDPSPG--GSYAYARRCFG 82 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTT--THHHHHHHHSC
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCC--CchhhHHhHcC
Confidence 46789999999999999999999999999888885 4788888899999999999999887777654 88899999999
Q ss_pred ccccchhhHHHHHHHHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhhHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q 013718 116 EKLGLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFIMIFASVHFVLSHLPNFNAIAGVSLAAAV 195 (437)
Q Consensus 116 ~~~g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~pl~~~~~l~~l~~~s~~~~~ 195 (437)
|++| ++......+.......++....++++...++... ..+....+.+++ ++++-....+..+...+++.+...
T Consensus 83 ~~~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~in~~g~~~~~~~~~~~~~ 156 (445)
T 3l1l_A 83 PFLG-YQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK----DPWVLTITCVVV-LWIFVLLNIVGPKMITRVQAVATV 156 (445)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGG----SHHHHHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccc----ccHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHH
Confidence 9888 8888877777666666666666665554433211 001111111111 112222223456666666655554
Q ss_pred HHHHHHHHHhhhheeccCCCCccccccccCccchHhHHHHhhhhhhhhcccceeeccccccCCcCCCCCCCcccchhhhh
Q 013718 196 MSLSYSTIAWSASVRKGVQPDVAYGYKAKTAAGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVVV 275 (437)
Q Consensus 196 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~faf~~~~~i~~i~~~m~~~~k~p~~~~~~~~~~~ 275 (437)
..+...++.....+...........+.+ ....++.++..++....|+|.|.+.+....+|+ |||+| +.+|++..
T Consensus 157 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~----k~p~r-~ip~a~~~ 230 (445)
T 3l1l_A 157 LALIPIVGIAVFGWFWFRGETYMAAWNV-SGLGTFGAIQSTLNVTLWSFIGVESASVAAGVV----KNPKR-NVPIATIG 230 (445)
T ss_dssp HHHHHHHHHHHTTSTTCCCCCCCCC------------HHHHHHHHHHTTTTTTHHHHGGGGB----SSHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhcccccCc-cCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHh----cCccc-cccHHHHH
Confidence 4333222222222222111111111111 112235678899999999999999999999999 88865 67799999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccch----hhh---hhCCCCchHHHHHHHHHHHHHHHhhcceeccchHHHHHHHHh
Q 013718 276 AYIVVALCYFPVALIGYWMFGNKVE----DNI---LLSLEKPTWLIVMANFFVVVHVIGSYQIYAMPVFDMIETLLV 345 (437)
Q Consensus 276 ~~~~~~~~y~~~g~~gy~~fg~~~~----~~i---l~~~~~~~~~~~~~~~~~~i~~~~s~pl~~~~~~~~~~~~~~ 345 (437)
+..++.++|+...+......+.+.. ++. ..... .++...+..+...+..+.+.-...+...+.+..+-+
T Consensus 231 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~ 306 (445)
T 3l1l_A 231 GVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAAD 306 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHH-CTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988876666653221 111 11111 133444455555555555554444555555555443
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.58 E-value=5e-14 Score=140.57 Aligned_cols=361 Identities=13% Similarity=0.088 Sum_probs=205.0
Q ss_pred ccCCCchhhHHHHhhhcccccccchHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHHcchhCCCccccCHHHHHHHHh
Q 013718 36 SSRNAKWWYSAFHNVTAMVGAGVLSLPYAM-AQLGWGPGVAILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAF 114 (437)
Q Consensus 36 ~~~~~s~~~~~~~l~~~~iG~GiL~LP~~f-~~~G~~~g~i~l~~~~~~~~~t~~~l~~~~~~~~~~~~~~y~~l~~~~~ 114 (437)
++|+.+.++..+..+++++|+|++..|... +.+|- .+++..++.+++.......+.|...+.|+.. +..+..++.+
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~~G--g~y~~~~~~~ 80 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNA--GPIAFIHKAI 80 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT--THHHHHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC--cHHHhHHHHh
Confidence 468899999999999999999999988654 45554 6788888999999999999999887777654 7889999999
Q ss_pred Cccc-cchhhHHHHHHHHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhh-H--HHHHHHHHHhCCCCchhhHHHH
Q 013718 115 GEKL-GLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFI-M--IFASVHFVLSHLPNFNAIAGVS 190 (437)
Q Consensus 115 G~~~-g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~-~--i~~~~i~pl~~~~~l~~l~~~s 190 (437)
|+++ + ..+.....+........+....++++...++. . ....+. + +...+++-....+..+...+++
T Consensus 81 G~~~~~-g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~ 151 (444)
T 3gia_A 81 GDNIIT-GALSILLWMSYVISIALFAKGFAGYFLPLINA----P----INTFNIAITEIGIVAFFTALNFFGSKAVGRAE 151 (444)
T ss_dssp CSSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----C----CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred CcchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----C----CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9863 2 12234444444445555666666666554321 1 111221 1 1111122222234566666665
Q ss_pred HHHHHHHHHHHHHHhhhheeccCCCCccccccccCccchHhHHHHhhhhhhhhcccceeeccccccCCcCCCCCCCcccc
Q 013718 191 LAAAVMSLSYSTIAWSASVRKGVQPDVAYGYKAKTAAGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMW 270 (437)
Q Consensus 191 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~faf~~~~~i~~i~~~m~~~~k~p~~~~~~ 270 (437)
.+.....+...++.+...+.....+ ++.+...+.++.+++.++....|+|.|.+.+....+|+ |||+| +.+
T Consensus 152 ~~~~~~~i~~~~~~ii~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~----k~P~r-~ip 222 (444)
T 3gia_A 152 FFIVLVKLLILGLFIFAGLITIHPS----YVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHI----ENPKK-NVP 222 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCGG----GTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGB----SSHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChh----hcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHc----cCccc-chh
Confidence 5554433332222222222221111 11112234556788999999999999999999999999 88975 677
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhcccccc----hhhhhhC-CCC--chHHHHHHHHHHHHHHHhhcceeccchHHHHHHH
Q 013718 271 RGVVVAYIVVALCYFPVALIGYWMFGNKV----EDNILLS-LEK--PTWLIVMANFFVVVHVIGSYQIYAMPVFDMIETL 343 (437)
Q Consensus 271 ~~~~~~~~~~~~~y~~~g~~gy~~fg~~~----~~~il~~-~~~--~~~~~~~~~~~~~i~~~~s~pl~~~~~~~~~~~~ 343 (437)
|++..+..++.++|+...+......+.+. +++.+.. ..+ .++...+..+...+..+.+.--......+.+..+
T Consensus 223 ~ai~~~~~~~~~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~ 302 (444)
T 3gia_A 223 RAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSL 302 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988876655554221 0111100 100 1233334444445555555444455555655555
Q ss_pred HhhhcC---C-CccchhhhhhhHHHHHHHHHHHhhccchhhhhhhhhcchhhhhHhhhcceeeec-cCCcccchhhhhhh
Q 013718 344 LVKKLN---F-SPTRLLRFVVRNLYVASTMFIGITFPFFGGLLGFFGGFAFAPTTYFVSQILPLQ-SSKTFSFLSFFFFG 418 (437)
Q Consensus 344 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ia~~~p~~~~i~~~~G~~~~~~l~~ilP~l~~l~-~~~~~~~~w~~~~g 418 (437)
-+++.- . +.++...........+++.+++. ..+++.+.++.+ .+..+.|.++++.+++ +++++..+|...+|
T Consensus 303 a~dg~lP~~f~~~~~~~P~~a~~~~~~~~~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 379 (444)
T 3gia_A 303 AKDGELPEFFERKVWFKSTEGLYITSALGVLFAL-LFNMEGVASITS--AVFMVIYLFVILSHYILIDEVGGRKEIVIFS 379 (444)
T ss_dssp HHHSSCCSSCCTTSCCSCTHHHHHHHHHHHHHHH-HSCHHHHHHHHH--HHHHHHHHHHHHHHHHTHHHHCCCHHHHHHH
T ss_pred HHCCCCCHHHhCCCCCCCcHHHHHHHHHHHHHHH-HcCHHHHHHHHH--HHHHHHHHHHHHHHHHhhhcCCCcchHHHHH
Confidence 444320 0 00110011111111122222222 346777777644 2346777777766662 22222234554444
Q ss_pred hH
Q 013718 419 TV 420 (437)
Q Consensus 419 ~~ 420 (437)
.+
T Consensus 380 ~~ 381 (444)
T 3gia_A 380 FI 381 (444)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.35 E-value=6e-11 Score=120.35 Aligned_cols=295 Identities=9% Similarity=0.024 Sum_probs=158.3
Q ss_pred cccCCCchhhHHHHhhhcccccccchHHHHHHhcCchhHHHHHHHHHHHHH-HHHHHHHHcch--hCCCccccCHHHHHH
Q 013718 35 TSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMAQLGWGPGVAILILSWIITL-YTLWQMVEMHE--MVPGKRFDRYHELGQ 111 (437)
Q Consensus 35 ~~~~~~s~~~~~~~l~~~~iG~GiL~LP~~f~~~G~~~g~i~l~~~~~~~~-~t~~~l~~~~~--~~~~~~~~~y~~l~~ 111 (437)
+.+|+.+.++.++..++.++| +.++|. .+..|. .+++..++.+++.. .....+.|... +.| .. ......+
T Consensus 8 ~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~-~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~G--G~y~~~~ 80 (511)
T 4djk_A 8 GKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGF-SLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EG--GVFAWVS 80 (511)
T ss_dssp ----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTT-HHHHHHHHHHHHTHHHHHHHHHHHHTTSCC------CHHHHHH
T ss_pred ccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CC--ChhhhHH
Confidence 356889999999999999986 677776 455664 34444444444332 36777888777 777 55 8899999
Q ss_pred HHhCccccchhhHHHHHHHHhHHhhhhHhhhccchHHHH--HHHhcCCCCCccchhhhHHHHHHHHHHhCCCCchhhHHH
Q 013718 112 HAFGEKLGLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVH--ELLCKEPCKEIKLSYFIMIFASVHFVLSHLPNFNAIAGV 189 (437)
Q Consensus 112 ~~~G~~~g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~--~~~~~~~~~~~~~~~~~~i~~~~i~pl~~~~~l~~l~~~ 189 (437)
+.+||++| ++......+.......++....++.+..++ +... ...+....+.+++..++..+. .+..+...++
T Consensus 81 ~~~g~~~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~in-~~g~~~~~~~ 155 (511)
T 4djk_A 81 NTLGPRWG-FAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALN---EDPITKTIAALIILWALALTQ-FGGTKYTARI 155 (511)
T ss_dssp HHHCHHHH-HHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGGT---SCSSHHHHHHHHHHHHHHHHH-HTCSSSHHHH
T ss_pred hhcCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc---cCcHHHHHHHHHHHHHHHHHH-HhChHHHHHH
Confidence 99999888 777777777666655556555555543321 1111 111111111222222222222 2344555555
Q ss_pred HHHHHHHH----HHHHHHHhhhheeccCCCCccccccccCccchHhHHHHhhhhhhhhcccceeeccccccCCcCCCCCC
Q 013718 190 SLAAAVMS----LSYSTIAWSASVRKGVQPDVAYGYKAKTAAGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPS 265 (437)
Q Consensus 190 s~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~faf~~~~~i~~i~~~m~~~~k~p~ 265 (437)
+.+..... ++.+++........+...+...+.....+.....+...++...+|+|.|.+.+....+|+ |||+
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~----k~P~ 231 (511)
T 4djk_A 156 AKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEM----SNPG 231 (511)
T ss_dssp THHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSS----SCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhc----cCcc
Confidence 44432221 111111111111111111100111111111111233456778899999999999999999 8998
Q ss_pred CcccchhhhhHHHHHHHHHHHHHhhhhhcccccchh----------hhhhCCC-CchHHHHHHHHHHHHHHHhhcceecc
Q 013718 266 KGPMWRGVVVAYIVVALCYFPVALIGYWMFGNKVED----------NILLSLE-KPTWLIVMANFFVVVHVIGSYQIYAM 334 (437)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~y~~~g~~gy~~fg~~~~~----------~il~~~~-~~~~~~~~~~~~~~i~~~~s~pl~~~ 334 (437)
| +.+|++..+..++.++|++..+......+++... .+..+.. ...+...+..+...+..+.+......
T Consensus 232 k-~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (511)
T 4djk_A 232 R-DYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIV 310 (511)
T ss_dssp T-THHHHHHHHHHHHHHHHHHHHHHHHTTSCTTSCCSSSTHHHHHHHHHSSSCSSCTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred c-chhHHHHHHHHHHHHHHHHHHHHHHeecCHhhccccchHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 7789999999999999999888777666543211 1112221 02344555555555555555443444
Q ss_pred chHHHHHHHHhh
Q 013718 335 PVFDMIETLLVK 346 (437)
Q Consensus 335 ~~~~~~~~~~~~ 346 (437)
...+.+..+-++
T Consensus 311 ~~sR~l~a~ard 322 (511)
T 4djk_A 311 GPSRGMYVTAQK 322 (511)
T ss_dssp HHHHHTCHHHHG
T ss_pred HHHHHHHHHccC
Confidence 445555444433
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.56 E-value=1e-05 Score=81.42 Aligned_cols=335 Identities=9% Similarity=0.023 Sum_probs=169.9
Q ss_pred cCCCchhhHHHHhhhcccccccchHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHcchhCCCccccCHHHHHHHHh
Q 013718 37 SRNAKWWYSAFHNVTAMVGAGVLSLPYAMAQLGW--GPGVAILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAF 114 (437)
Q Consensus 37 ~~~~s~~~~~~~l~~~~iG~GiL~LP~~f~~~G~--~~g~i~l~~~~~~~~~t~~~l~~~~~~~~~~~~~~y~~l~~~~~ 114 (437)
+|+.++++-+..-++..++.+.+.+...+.. |+ .-+++..++..++...-+.+......+. + .++.++.+..|
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~-GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~-G---l~~~v~~R~~F 98 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTS-SFQVWQVIVAIAAGCTIAVILLFFTQSAAIRW-G---INFTVAARMPF 98 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-C---CCHHHHTTTTS
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhc-C---CChhhhhHhhc
Confidence 4667888888888888887777777766654 54 4444444444444333333333333222 2 27999999999
Q ss_pred CccccchhhHHHHHHHHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhhHHHHHHHHHHhCCCCchhhHHHHHHHH
Q 013718 115 GEKLGLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFIMIFASVHFVLSHLPNFNAIAGVSLAAA 194 (437)
Q Consensus 115 G~~~g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~pl~~~~~l~~l~~~s~~~~ 194 (437)
|++ |..+..+...+.+.|-...-....++.+..++....+.+ +...+.+++.++.++..+. ..+.++++..+..
T Consensus 99 G~~-Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~g~~----~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~ 172 (501)
T 2jln_A 99 GIR-GSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFT----NLPLWIVIFGAIQVVTTFY-GITFIRWMNVFAS 172 (501)
T ss_dssp CTT-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc----hHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 975 557888888888888877777778888888776543111 1234556677777777754 5777777777766
Q ss_pred HHHHHHHHHHhhhheeccCCC-CccccccccCccchHhHHHHhhhhh-hhhcccceeeccccccCCcCCCCCCC---cc-
Q 013718 195 VMSLSYSTIAWSASVRKGVQP-DVAYGYKAKTAAGTVFNFFSALGDV-AFAYAGHNVVLEIQATIPSTPEKPSK---GP- 268 (437)
Q Consensus 195 ~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~-~faf~~~~~i~~i~~~m~~~~k~p~~---~~- 268 (437)
...++.++...+..+.+.... +.....++ ......+..++... .+.-....+.+...+.+ |++++ ++
T Consensus 173 p~~~i~~i~~~~~~l~~~g~~~~~~~~~~~---~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~----~~~~~~~~~~~ 245 (501)
T 2jln_A 173 PVLLAMGVYMVYLMLDGADVSLGEVMSMGG---ENPGMPFSTAIMIFVGGWIAVVVSIHDIVKEC----KVDPNASREGQ 245 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHTTCCC---SSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTB----CCCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhccCC---ccchHHHHHHHHHHHHHHHHHHhccCcccccC----CCCccccccch
Confidence 544433332222222221110 00001000 11122333333331 22223346678888888 44433 01
Q ss_pred ------cchhhhhHHHHHHHHHHHHHhhhhhcccccchhhhhhC-CCCchHHHHHHH-HHHHHHHHhhcc-eeccchHHH
Q 013718 269 ------MWRGVVVAYIVVALCYFPVALIGYWMFGNKVEDNILLS-LEKPTWLIVMAN-FFVVVHVIGSYQ-IYAMPVFDM 339 (437)
Q Consensus 269 ------~~~~~~~~~~~~~~~y~~~g~~gy~~fg~~~~~~il~~-~~~~~~~~~~~~-~~~~i~~~~s~p-l~~~~~~~~ 339 (437)
.......+..+...+...+|+..-...+...+..++.. ++.......+.- +.+.+..+.+-- -..++....
T Consensus 246 ~~~~~~~~~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~ 325 (501)
T 2jln_A 246 TKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYT 325 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHH
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 11223344555555555555543333333333444444 322222133333 444444433322 245566555
Q ss_pred HHHHHhhhcCCCccchhhhhhhHHHHHHHHHHHhhc--cchhhhhhhhhcchhhhhHhh
Q 013718 340 IETLLVKKLNFSPTRLLRFVVRNLYVASTMFIGITF--PFFGGLLGFFGGFAFAPTTYF 396 (437)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~--p~~~~i~~~~G~~~~~~l~~i 396 (437)
+....++. -++ + ....+..++.++++... .++..++++.|.+.....+..
T Consensus 326 l~~~~~~~----i~~-~--~~~~i~~vi~~~i~~~~~~~~f~~FL~~lg~~l~P~~gI~ 377 (501)
T 2jln_A 326 LCSTFPRV----FTF-K--TGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIM 377 (501)
T ss_dssp HHHHSTTT----CCH-H--HHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHhCccc----cch-h--HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554221 011 1 11122223333333332 346677777777776555544
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.70 E-value=0.0013 Score=66.56 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=79.2
Q ss_pred cccCCCchhhHHHHhhhccccc-ccchHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHcchhCCCccccCHHHHHHHH
Q 013718 35 TSSRNAKWWYSAFHNVTAMVGA-GVLSLPYAMAQLGWGPGVAILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHA 113 (437)
Q Consensus 35 ~~~~~~s~~~~~~~l~~~~iG~-GiL~LP~~f~~~G~~~g~i~l~~~~~~~~~t~~~l~~~~~~~~~~~~~~y~~l~~~~ 113 (437)
-..|+.+++...+.+..+.+++ .++++|....+.|+......... ++........+....++. +..|.+|.-++-
T Consensus 17 laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~-~~~~~i~~~~~~p~~~~~---~~~T~~e~l~~R 92 (530)
T 3dh4_A 17 XAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIEK---GIYTIPEFVEKR 92 (530)
T ss_dssp CCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHH-HHHHHHHHHHTHHHHHHT---TCCSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHHc---CCccHHHHHHHH
Confidence 4568889999999988888877 56899998888897543211111 111111122222222222 345999999999
Q ss_pred hCccccchhhHHHHHH-HHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhhHHHHHHHHHHhCCCCchhhHHHHHH
Q 013718 114 FGEKLGLYIVVPQQLI-VEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFIMIFASVHFVLSHLPNFNAIAGVSLA 192 (437)
Q Consensus 114 ~G~~~g~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~pl~~~~~l~~l~~~s~~ 192 (437)
||++.+ .+..+...+ +.+....+-+...+..++.+ . .++....+++.++++..-.....++...+...+
T Consensus 93 fg~~~~-~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~----~-----Gi~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~i 162 (530)
T 3dh4_A 93 FNKKLK-TILAVFWISLYIFVNLTSVLYLGGLALETI----L-----GIPLMYSILGLALFALVYSIYGGLSAVVWTDVI 162 (530)
T ss_dssp TCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHHHHHHH----T-----TCCHHHHHHHHHHHHHHTTC------CCSHHHH
T ss_pred cCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-----CCCHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 998654 444443322 22211222222223333332 2 233344455566666666777777777777777
Q ss_pred HHHHHHH
Q 013718 193 AAVMSLS 199 (437)
Q Consensus 193 ~~~~~~~ 199 (437)
-.+..+.
T Consensus 163 Q~~im~~ 169 (530)
T 3dh4_A 163 QVFFLVL 169 (530)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6664443
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.10 E-value=0.037 Score=56.60 Aligned_cols=149 Identities=15% Similarity=0.144 Sum_probs=75.5
Q ss_pred ccCCCchhhHHHHhhhccccc-ccchHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHcchhCCCccccCHHHHHHHHh
Q 013718 36 SSRNAKWWYSAFHNVTAMVGA-GVLSLPYAMAQLGWGPGVAILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAF 114 (437)
Q Consensus 36 ~~~~~s~~~~~~~l~~~~iG~-GiL~LP~~f~~~G~~~g~i~l~~~~~~~~~t~~~l~~~~~~~~~~~~~~y~~l~~~~~ 114 (437)
..|+.+++...+.+..+.+++ ..++.|....+.|+......+.. ++........+..-.++. +..|.+|.-++=|
T Consensus 47 aGR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~-~~~~~~~~~~~~p~~~r~---~~~T~~e~l~~Rf 122 (593)
T 2xq2_A 47 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIEK---GIYTIPEFVEKRF 122 (593)
T ss_dssp ----CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHH-HHHHHHHHHTHHHHHHHT---TCCSHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHHhC---CCCCcHHHHHHHc
Confidence 457788888888888777776 45799988888887432221111 111111122222222222 2459999999999
Q ss_pred CccccchhhHHHHHH-HHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhhHHHHHHHHHHhCCCCchhhHHHHHHH
Q 013718 115 GEKLGLYIVVPQQLI-VEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFIMIFASVHFVLSHLPNFNAIAGVSLAA 193 (437)
Q Consensus 115 G~~~g~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~pl~~~~~l~~l~~~s~~~ 193 (437)
|++.+ .+..+...+ +.+.....-+...+..++.+++ ++....+++.++++........++...+.-.+-
T Consensus 123 g~~~~-~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G---------i~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ 192 (593)
T 2xq2_A 123 NKKLK-TILAVFWISLYIFVNLTSVLYLGGLALETILG---------IPLMYSILGLALFALVYSIYGGLSAVVWTDVIQ 192 (593)
T ss_dssp CHHHH-HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHTTC---CCHHHHHH
T ss_pred cCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------ccHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 97654 444333222 2221112222223333433331 333444555666667777777777777776666
Q ss_pred HHHHH
Q 013718 194 AVMSL 198 (437)
Q Consensus 194 ~~~~~ 198 (437)
.+..+
T Consensus 193 ~iiml 197 (593)
T 2xq2_A 193 VFFLV 197 (593)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=85.76 E-value=29 Score=34.31 Aligned_cols=32 Identities=28% Similarity=0.288 Sum_probs=27.3
Q ss_pred CchhhHHHHhhhcccccc-cchHHHHHHhcCch
Q 013718 40 AKWWYSAFHNVTAMVGAG-VLSLPYAMAQLGWG 71 (437)
Q Consensus 40 ~s~~~~~~~l~~~~iG~G-iL~LP~~f~~~G~~ 71 (437)
.|..+-.+..++..+|-| +-=.||-..+-|..
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGg 41 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGG 41 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTH
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCc
Confidence 566888999999999998 78999999888843
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=42.04 E-value=62 Score=32.01 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=59.1
Q ss_pred ccCCCchhhHHHHhhhcccccccchH----HHHHHhc---Cc-----hhHHHHHHHHHHHHHHHHHHHHHc---chhCCC
Q 013718 36 SSRNAKWWYSAFHNVTAMVGAGVLSL----PYAMAQL---GW-----GPGVAILILSWIITLYTLWQMVEM---HEMVPG 100 (437)
Q Consensus 36 ~~~~~s~~~~~~~l~~~~iG~GiL~L----P~~f~~~---G~-----~~g~i~l~~~~~~~~~t~~~l~~~---~~~~~~ 100 (437)
++++-|.++-+..+..+-+|+|++-- |....+. |. -.+.-...+=+-+.-|+.+.+.-. .-.+++
T Consensus 92 ~kPefS~~sW~aMlF~AGmGiGl~FwgvaEPl~h~~~pP~~~~~eAa~~Am~~t~fHWG~~~WAiYav~glalaY~~yrk 171 (539)
T 4ain_A 92 EAPEFRTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIVGLAIAYSTFRV 171 (539)
T ss_dssp CCCSSCHHHHHHHHHTTSCCTHHHHHHHHHHHHHHHTCCTTSCSSCHHHHHHHHHHHHSHHHHHHHHHHHHHHHCCCCCT
T ss_pred CCCCCcchHHHHHHHHHhhcchheeehhhhhHHHhcCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhcC
Confidence 35667889999999999999999843 3322211 11 112222233233333444443332 111222
Q ss_pred ccc-----cCHHHHHHH-HhCccccchhhHHHHHHHHhHHhhhhHhhhccchHHHHHHHhc
Q 013718 101 KRF-----DRYHELGQH-AFGEKLGLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVHELLCK 155 (437)
Q Consensus 101 ~~~-----~~y~~l~~~-~~G~~~g~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~ 155 (437)
++. .=|+-++++ .-|+ +| .++|+.-.+...+....-+-+....+..-++...+
T Consensus 172 ~~pl~iss~l~PllG~r~~~G~-~G-~~IDilav~atv~GvatSLGlg~~Qi~~Gl~~lfG 230 (539)
T 4ain_A 172 GRKQLLSSAFVPLIGEKGAEGW-LG-KLIDILAIIATVFGTACSLGLGALQIGAGLSAANI 230 (539)
T ss_dssp CCCSCTTGGGHHHHHHHHTTSH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCcHHHHhHhhcCCCccCCc-ch-hhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC
Confidence 211 125666666 5664 67 67777755554444443444444444444555443
No 9
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=17.35 E-value=5e+02 Score=22.55 Aligned_cols=25 Identities=8% Similarity=0.086 Sum_probs=18.4
Q ss_pred CchHHHHHHHHHHHHHHHhhcceec
Q 013718 309 KPTWLIVMANFFVVVHVIGSYQIYA 333 (437)
Q Consensus 309 ~~~~~~~~~~~~~~i~~~~s~pl~~ 333 (437)
-+++...+.+......+..-.|+..
T Consensus 146 i~~Yl~fv~~l~l~fGl~FelPvi~ 170 (249)
T 4b4a_A 146 VDMYISFVLKLVVAFGIAFEMPIVL 170 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577777788888888888777643
No 10
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=16.15 E-value=7.6e+02 Score=24.08 Aligned_cols=160 Identities=14% Similarity=0.102 Sum_probs=75.6
Q ss_pred ccCCCchhhHHHHhhhcccccccchHH----HHHHhc---C----chh----HHHHHHHHHHHHHHHHHHHHH-----cc
Q 013718 36 SSRNAKWWYSAFHNVTAMVGAGVLSLP----YAMAQL---G----WGP----GVAILILSWIITLYTLWQMVE-----MH 95 (437)
Q Consensus 36 ~~~~~s~~~~~~~l~~~~iG~GiL~LP----~~f~~~---G----~~~----g~i~l~~~~~~~~~t~~~l~~-----~~ 95 (437)
++++-|.++-+..+..+-+|.|++--. ....+. | -.- +.-...+=+-+.-|+.+.+.- ..
T Consensus 87 ~kPefs~~sW~aMlF~aGmGiGl~fwgvaEP~~h~~~pP~~~~~~s~eAa~~Am~~tffHWG~~~WaiYal~~lalayf~ 166 (509)
T 2wsw_A 87 EKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFF 166 (509)
T ss_dssp SCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCSTTCCTTCHHHHHHHHHHHHHHTSHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHhhhhHHhhhhhhhhHHHccCCCCCCCCCcHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 556688899999999999999987653 222211 1 111 111111111122233222222 11
Q ss_pred h-hC--CC-ccccCHHHHH-HHHhCccccchhhHHHHHH-HHhHHhhhhHhhhccchHHHHHHHhcCCCCCccchhhhHH
Q 013718 96 E-MV--PG-KRFDRYHELG-QHAFGEKLGLYIVVPQQLI-VEVGVCIVYMVTGGKSLHKVHELLCKEPCKEIKLSYFIMI 169 (437)
Q Consensus 96 ~-~~--~~-~~~~~y~~l~-~~~~G~~~g~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 169 (437)
. ++ |. -|..=|+-++ ++.-|+ .| .++|+.-.+ ..+|..++ +-+....+..-++...+-+.. ......+++
T Consensus 167 y~r~~~pl~iss~l~PllG~~r~~G~-~G-~~IDilav~at~~G~ats-LGlg~~qi~~Gl~~lfGi~~~-~~~qi~ii~ 242 (509)
T 2wsw_A 167 FVRKMEVIRPSSTLVPLVGEKHVNGL-FG-TVVDNFYLVALILAMGTS-LGLATPLVTECIQYLFGIPHT-LQLDAIIIS 242 (509)
T ss_dssp HTSCCCCCSGGGGCHHHHHHHHHHSH-HH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCC-HHHHHHHHH
T ss_pred HHcCCCCcchHHHhHhhcCCcccCCc-hh-hhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCc-cHHHHHHHH
Confidence 1 11 11 1122366677 677774 78 566766544 44455543 333333444444444332221 111111222
Q ss_pred HHHHHHHHhCCCCc-hhhHHHHHHHHHHHHH
Q 013718 170 FASVHFVLSHLPNF-NAIAGVSLAAAVMSLS 199 (437)
Q Consensus 170 ~~~~i~pl~~~~~l-~~l~~~s~~~~~~~~~ 199 (437)
...++.-.+....+ |..+++|.+.+.+.+.
T Consensus 243 vit~~~~~Sa~sGl~kGIk~LS~~N~~la~~ 273 (509)
T 2wsw_A 243 CWILLNAICVAFGLQKGVKIASDVRTYLSFL 273 (509)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 22333445555666 6777777766664443
Done!