Your job contains 1 sequence.
>013719
MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI
TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG
KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKASSGY
VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVLGKIILKTIS
GGLVAGEEEIDEEEMPEVLDKDSVENYLAKKNRKRGLQPSSAELKLKTAKKCKWTEKFSS
INHELSMNKEDVVPKEEVEEIHKAVKNCQLPDKELKVRTTEKHKWIENSCHFDQELSINE
ELVQKEGSQQLGEETQKAAKTCQSPEEEIKVNPEKILEKKDRHSLSTEGTNKKRDKQKRA
DDKKKNGLLLSSLFKEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013719
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053913 - symbol:AT2G17580 species:3702 "Arabi... 515 1.1e-51 2
TAIR|locus:2171641 - symbol:AT5G23690 species:3702 "Arabi... 293 2.6e-25 1
TAIR|locus:2010439 - symbol:AT1G28090 species:3702 "Arabi... 272 1.1e-21 1
TAIR|locus:2099473 - symbol:AT3G48830 species:3702 "Arabi... 226 1.2e-15 1
>TAIR|locus:2053913 [details] [associations]
symbol:AT2G17580 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006396 "RNA processing"
evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002646 Pfam:PF01743 GO:GO:0009507 EMBL:CP002685
GO:GO:0003723 GO:GO:0006396 GO:GO:0016779 IPI:IPI00525115
RefSeq:NP_179349.2 UniGene:At.40128 ProteinModelPortal:F4INK3
SMR:F4INK3 PRIDE:F4INK3 EnsemblPlants:AT2G17580.1 GeneID:816265
KEGG:ath:AT2G17580 OMA:KEDCARI Uniprot:F4INK3
Length = 757
Score = 515 (186.3 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 117/253 (46%), Positives = 154/253 (60%)
Query: 6 SSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXXPFHAAYLDQQAGKITAENP 65
SS+ LD+ R++ME+NYML+YGAA SI PF AAYLDQ A K + +
Sbjct: 280 SSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLDQ-ASKTSLSSS 338
Query: 66 MMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEG 125
+ML+RLF N+DKLVSCD+PAD LW+ +L+FH ALV +PQ+A VV FA++LYHG W +
Sbjct: 339 LMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKA 398
Query: 126 VKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS-------- 177
V+FAR+ + + PE+S S SDE LA V+E ++D LT
Sbjct: 399 VEFAREHETSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYL 458
Query: 178 ------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVL 231
SG VF+ KK R+V + F + ++ +ESY S K IDY +LGKGN E RFVL
Sbjct: 459 YPDFKFSGLVFIPKKKGRDVAEGF-MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVL 517
Query: 232 GKIILKTISGGLV 244
GKIIL TI+ G V
Sbjct: 518 GKIILDTITEGTV 530
Score = 43 (20.2 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 328 CQLPDKELKVRTTEKH-KWIENSCHFDQELSINEELVQKEGSQQLGEETQKAAKTCQSPE 386
C+LP K +T++ H K H D L + E KE Q + K+
Sbjct: 677 CELP----KQKTSKNHSKESRKVKHND--LPVKEI---KEAKQGFVSD-----KSMSDLL 722
Query: 387 EEIKVNPEKILEKKDRHSLSTEGTN 411
+ ++ + +++ K++ +SLS+E TN
Sbjct: 723 QVLEKSSQQVSSKEENNSLSSEKTN 747
>TAIR|locus:2171641 [details] [associations]
symbol:AT5G23690 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0006396 "RNA
processing" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
EMBL:CP002688 GO:GO:0003723 GO:GO:0006396 GO:GO:0016779
IPI:IPI00531764 RefSeq:NP_197758.2 UniGene:At.30996
ProteinModelPortal:F4KE92 SMR:F4KE92 PRIDE:F4KE92 DNASU:832434
EnsemblPlants:AT5G23690.1 GeneID:832434 KEGG:ath:AT5G23690
OMA:CHNSLWI Uniprot:F4KE92
Length = 527
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 79/253 (31%), Positives = 126/253 (49%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXXPFHAAYLDQQAGKITA 62
+LS ++RLDK RI+ME+NYML+YG+AE+S+ P AAYL + +
Sbjct: 266 NLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRRRD 325
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF NLDKL++ DRP +LW+ +L+FH+AL P+ VV F+ +++ G
Sbjct: 326 KRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADKPRSPIVVAAFSLAVHNCGD 385
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------K 175
E V+ + + K E+ E + L +V +L S++D +N +T K
Sbjct: 386 ILEAVEITKKITRPHDKSFFELVEPEENLDFQTLLDEVMDLDASIEDALNQMTDAYFISK 445
Query: 176 ASSGY--------VFVSKKIERNVQQIFDVLVNSIESYN-SGKRSHIIDYDMLGKGNLVE 226
A S Y VF+ ++ +IFD + N K+ I+Y L G E
Sbjct: 446 AMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRIGFEAKQGSKIEYGSLNSGYFPE 505
Query: 227 TRFVLGKIILKTI 239
R V +++ T+
Sbjct: 506 IRHVFARVVFDTV 518
>TAIR|locus:2010439 [details] [associations]
symbol:AT1G28090 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006396 "RNA processing"
evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002646 Pfam:PF01743 EMBL:CP002684
GO:GO:0003723 GO:GO:0006396 GO:GO:0016779 IPI:IPI00536358
RefSeq:NP_174130.2 UniGene:At.40938 ProteinModelPortal:F4HUW0
SMR:F4HUW0 PRIDE:F4HUW0 EnsemblPlants:AT1G28090.1 GeneID:839702
KEGG:ath:AT1G28090 OMA:LPIQASY PhylomeDB:F4HUW0 Uniprot:F4HUW0
Length = 541
Score = 272 (100.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 65/173 (37%), Positives = 96/173 (55%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXXPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ P A+YL Q +
Sbjct: 283 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 342
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG-KW 122
ML+ LF NLD+LV+ DRP LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 343 RSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 402
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDCVNDL 173
E + AR +K+ E+S + +S+ +++ +V +LA S++ L
Sbjct: 403 SEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKL 455
>TAIR|locus:2099473 [details] [associations]
symbol:AT3G48830 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006396 "RNA processing" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002646
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01743 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
eggNOG:COG0617 EMBL:AL132963 GO:GO:0016779 IPI:IPI00528017
PIR:T49279 RefSeq:NP_190452.1 UniGene:At.35678
ProteinModelPortal:Q9M300 SMR:Q9M300 PaxDb:Q9M300 PRIDE:Q9M300
EnsemblPlants:AT3G48830.1 GeneID:824044 KEGG:ath:AT3G48830
TAIR:At3g48830 HOGENOM:HOG000240765 InParanoid:Q9M300 OMA:FTISKET
PhylomeDB:Q9M300 ProtClustDB:CLSN2913480 Genevestigator:Q9M300
Uniprot:Q9M300
Length = 881
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 62/212 (29%), Positives = 111/212 (52%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICXXXXXXXXXXXXPFHAAYLDQQAGKI 60
+ +LS ++RL + RI++E+NYML+YG+AE+S+ P AAYL + K
Sbjct: 260 LKNLSFLVQRLHRGRILLEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLVRTGFKR 319
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ +L+ LF NLDKL++ D+P +LW+ +L+ H+AL P+ VV F+ +++G
Sbjct: 320 RDKRSNLLLSLFGNLDKLLAPDKPCHSSLWLTILALHKALADQPRYPSVVAAFSLAVHNG 379
Query: 121 -KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKASSG 179
E VK R K + E+ E++S + L +V + S+++ + +T
Sbjct: 380 GDVLEAVKNTRKVTKPHNRSFFELLEPEEMDS-QTLLDEVMDFDSSIKEALGQMTDGR-- 436
Query: 180 YVFVSKKIERNVQQIF-DVLVNSIESYNSGKR 210
F+SK + Q + D++ ++ Y +R
Sbjct: 437 --FISKAMAAYPQAPYSDMVFIPLQLYLDARR 466
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 388 0.00093 117 3 11 23 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 615 (65 KB)
Total size of DFA: 250 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.71u 0.08s 32.79t Elapsed: 00:00:01
Total cpu time: 32.71u 0.08s 32.79t Elapsed: 00:00:01
Start: Sat May 11 16:02:18 2013 End: Sat May 11 16:02:19 2013