BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013719
(437 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561389|ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative [Ricinus communis]
Length = 675
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 249/375 (66%), Gaps = 34/375 (9%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ LSSS++ LDK+RIMMELNYMLSYGAAES+I LL+R+NLL++ LPFHAAYL QQAG+
Sbjct: 256 IRKLSSSVKSLDKARIMMELNYMLSYGAAESTIYLLQRFNLLELFLPFHAAYLSQQAGET 315
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ +MLM+LFFNLD LVSCDRP +LWVGLL+FHQALV++PQDA V WVFASVLYHG
Sbjct: 316 FSLGSVMLMKLFFNLDTLVSCDRPCTSSLWVGLLAFHQALVTNPQDALVSWVFASVLYHG 375
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDL------- 173
KWK+GV+FAR+ AK VKF PEISGFSE +SDE+LA +V+ LA VQD V+ L
Sbjct: 376 KWKDGVEFARENAKMQVKFAPEISGFSEFKSDEELAEEVSHLASLVQDSVDALMDTDTLA 435
Query: 174 -------TKASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVE 226
+SSG VFVSKKI +V Q+F+VLV+ +ESY + + S +IDY +LGKGN E
Sbjct: 436 QSMSRFGVTSSSGLVFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHE 495
Query: 227 TRFVLGKIILKTISGGLVAGEEEIDEEEMPEVLDK-------DSVENYLAK-KNRKRGLQ 278
TRFVLGK+IL+T+SGGL G E E+ P+V+++ D V++Y+ + K L
Sbjct: 496 TRFVLGKVILETLSGGLTKGVEV--AEDGPKVIEEKHDSKLSDLVKDYMVEWKEEIPVLS 553
Query: 279 PSSAELKLKTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEI----HKAVKNCQLPDKE 334
P E K + S E KEDV+ K + E + K +K QLP+ E
Sbjct: 554 PLDHEHSQKKTGNKRKLVMTKSFYEEKVATKEDVL-KNKSEAVAKKPQKILKITQLPELE 612
Query: 335 LKVRTTEKHKWIENS 349
K KH ENS
Sbjct: 613 KK-----KHHLSENS 622
>gi|224084064|ref|XP_002307206.1| predicted protein [Populus trichocarpa]
gi|222856655|gb|EEE94202.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 188/255 (73%), Gaps = 19/255 (7%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
L SS++ L+K RI MELNYMLSYGAAES+I LL+R++LLKI LPFHAAYL +QA +++A+
Sbjct: 209 LQSSVKSLNKDRIKMELNYMLSYGAAESTILLLQRFHLLKIFLPFHAAYLHEQADEVSAQ 268
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWK 123
MLM+L ++LDK+VS DRP D +LWVGLL+FHQALV +PQDAFV+W FAS+LY G W+
Sbjct: 269 GSTMLMKLLYSLDKIVSSDRPCDCSLWVGLLAFHQALVLNPQDAFVIWAFASILYCGTWQ 328
Query: 124 EGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKASS----- 178
EGVKFAR+ AK +FVPEISGFSEI+SDE+LA +V++LA VQD VN T S
Sbjct: 329 EGVKFARENAKVEGRFVPEISGFSEIKSDEKLAEEVSQLASLVQDAVNAFTDEISLSESL 388
Query: 179 ---------GYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRF 229
+VFVSKKI + +F ++S + S IDYD+L KG+L ETRF
Sbjct: 389 SRYLDPPLDVFVFVSKKIGEHAGLLF-----HMQSCEYRRESFKIDYDLLVKGDLYETRF 443
Query: 230 VLGKIILKTISGGLV 244
VLGK+ILKT+SGGLV
Sbjct: 444 VLGKVILKTLSGGLV 458
>gi|449456945|ref|XP_004146209.1| PREDICTED: uncharacterized protein LOC101212579 [Cucumis sativus]
Length = 810
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/464 (39%), Positives = 259/464 (55%), Gaps = 56/464 (12%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+H S SI LDKSR+MMELNYMLSYGAA S+ LL+R+ LL LLPFHAAYLD+Q +
Sbjct: 280 IHKFSPSITSLDKSRLMMELNYMLSYGAAVPSLYLLQRFKLLGSLLPFHAAYLDKQGIEK 339
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
++ + +MLM+LFFNLDKLVSC P++ +WV LL+FH ALV++PQ++ VV FA+ LYHG
Sbjct: 340 SSLSSVMLMKLFFNLDKLVSCAHPSNCNIWVALLAFHLALVNNPQNSLVVLAFAATLYHG 399
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------ 174
+W EGV +AR+++ + PEI+ ++ +S+E+LA VT AL VQ C+ LT
Sbjct: 400 EWNEGVNYAREKSLVEINLRPEITRSAKFKSEEKLAEGVTRFALKVQGCIAALTSKDCLL 459
Query: 175 --------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKG-NLV 225
++SG VFVS K R+V IF+VL ++SY K+ IDY LGKG L
Sbjct: 460 EAMSTFPASSNSGLVFVSNKTARDVAIIFEVLAKHVKSYKDEKKDFKIDYKRLGKGLFLR 519
Query: 226 ETRFVLGKIILKTISGGLVAGEEEIDEEEMPEVLD-----------KDSVENYLAKKNRK 274
E R+VLGKIIL+T+ ++ G E I + +D D V+ L K N+K
Sbjct: 520 ENRYVLGKIILETLEDAILQGNENIPDRNQNLRIDAPTKETSDSPVADLVQEQLVKGNKK 579
Query: 275 RGLQPSSAELKLKTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAVKNCQLPDKE 334
+PS +E++LK KK K K SI+ ++ N + E K V+ QLP
Sbjct: 580 VRKRPSVSEVELKANKKYKLVRKEGSISDKVVENGRCI---NMTEMYKKGVEGSQLPLAP 636
Query: 335 LKVRTTEKHKWIENS--CHFDQELSINEELVQKEGSQQLGEETQK--AAKTCQSPEEE-- 388
++ E + I S CH L + +E + +G E +K K Q +E
Sbjct: 637 ME----ESMEPILESRKCH---HLEVRATENMRENPESMGNEVKKIIPKKAFQKVTKELL 689
Query: 389 --IKVNPEKI---------LEKKDRHSLSTEGTNKKRDKQKRAD 421
+++NP K+ EKK+ H +S KK K+KR D
Sbjct: 690 HPVEINPRKMDKVAGQEVKSEKKEHHRVS---QGKKNIKKKRRD 730
>gi|357484075|ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula]
gi|355513659|gb|AES95282.1| Poly(A) polymerase [Medicago truncatula]
Length = 675
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 214/340 (62%), Gaps = 17/340 (5%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+ SS +E L+K R+M+E+NYMLSYGAAE S+ LL ++ LL+ LLP AAYLD+QA K A
Sbjct: 227 TCSSLVEDLNKDRMMIEMNYMLSYGAAEPSLRLLWKFKLLQFLLPVQAAYLDEQATKEDA 286
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKW 122
++ MLM+LFF++D LV C RP+D TLW+GLL+FH ALV++PQDA VVW FASVLYHG W
Sbjct: 287 QDSNMLMKLFFHMDNLVGCGRPSDCTLWIGLLAFHLALVNNPQDALVVWAFASVLYHGDW 346
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVN------DLTKA 176
+ G+KFA++ AK V F PEI S +SDE +A VT+LA V D ++ L+++
Sbjct: 347 EGGIKFAKEHAKMSVNFEPEIKRSSICKSDEDIAEAVTKLASLVIDSIHPLVNIESLSQS 406
Query: 177 SSGY---------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVET 227
S Y + VSKK + V +IF+VLVN I+ Y S ++S I+YDMLG G+ ET
Sbjct: 407 LSRYPSVPPPHMVLVVSKKTGKAVSEIFEVLVNDIKFYKSERKSAKINYDMLGSGHTSET 466
Query: 228 RFVLGKIILKTISGGLVAGEEEIDEEEM-PEVLDKDSVENYLAKKNRKRGLQPSSAELKL 286
RFVLGKI+L+T+ G++ + E+ P+ + ++++++ L + E +
Sbjct: 467 RFVLGKIVLQTMQSGIIGDADGFGTEKCHPDTEGTKDFGQLVTREDKRKVLSTPNLEHRP 526
Query: 287 KTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAVK 326
+ KK K E + I + + E KE EE K VK
Sbjct: 527 QKLKKQKLAEN-ACIEEQKTGLDEFCKYKETNEEHQKPVK 565
>gi|356495323|ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794882 [Glycine max]
Length = 714
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/366 (44%), Positives = 217/366 (59%), Gaps = 38/366 (10%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
M SS ++ LDK++IM+ELNYMLSYGAAE S+ LL ++ LL+ LLP HAAYLD+QA K
Sbjct: 259 MWKYSSLVKSLDKNKIMIELNYMLSYGAAEPSLHLLWKFKLLEFLLPVHAAYLDEQAIKE 318
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
A MLM+LFF LD LV+CDRP D TLWVGLL+FH LV++PQDA VVW FASVLYHG
Sbjct: 319 DAPASNMLMKLFFYLDNLVACDRPCDCTLWVGLLAFHLTLVNNPQDALVVWAFASVLYHG 378
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCV------NDLT 174
+W++G+KFA++ AK V F PEI S +SDE++A VT+LA V + N L
Sbjct: 379 EWEKGIKFAKEHAKMYVNFAPEIRTSSIYKSDEEIAKAVTKLASLVMHSIPALVESNSLL 438
Query: 175 KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHI-IDYDMLGKGNLV 225
++ S Y +FV KK + IF +L + +E Y + +R + I+Y MLGKG+L
Sbjct: 439 QSMSRYPSFPQSDMIFVPKKAGKLASAIFKMLASDVEFYKTERRKNSKINYGMLGKGHLS 498
Query: 226 ETRFVLGKIILKTISGGLVA---------------GEEEIDEEEMPEVLDKDSV----EN 266
E FVLGKI+L+T+S G V G +EI + ++P++++ + E
Sbjct: 499 EIAFVLGKIVLETMSSGTVGDGEDSEAGQCHLKTEGTKEIAQSQLPDLVNHEVAAMNGEG 558
Query: 267 YLAKKNRKRGLQPSSAELKLKTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAVK 326
+L Q S + KL +C +K SS N ELS E KE EE K VK
Sbjct: 559 HLLSIPNSECRQGKSKKRKL-VKNRCIAKKKMSSGNQELS---EKFEYKENKEEQQKLVK 614
Query: 327 NCQLPD 332
Q D
Sbjct: 615 LSQKVD 620
>gi|26449498|dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 571
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 171/277 (61%), Gaps = 23/277 (8%)
Query: 6 SSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENP 65
SS+ LD+ R++ME+NYML+YGAA SI LL ++ LL +LLPF AAYLDQ A K + +
Sbjct: 94 SSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLDQ-ASKTSLSSS 152
Query: 66 MMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEG 125
+ML+RLF N+DKLVSCD+PAD LW+ +L+FH ALV +PQ+A VV FA++LYHG W +
Sbjct: 153 LMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKA 212
Query: 126 VKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS-------- 177
V+FAR+ + + PE+S S SDE LA V+E ++D LT
Sbjct: 213 VEFAREHGTSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYL 272
Query: 178 ------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVL 231
SG VF+ KK R+V + F + ++ +ESY S K IDY +LGKGN E RFVL
Sbjct: 273 YPDFKFSGLVFIPKKKGRDVAEGF-MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVL 331
Query: 232 GKIILKTISGGLVAGEEEIDEEEMPEVLDKDSVENYL 268
GKIIL TI+ G V E + V K S N++
Sbjct: 332 GKIILDTITEGTVI-------EPLNSVKKKQSTRNHI 361
>gi|42569106|ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
gi|330251561|gb|AEC06655.1| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
Length = 757
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 171/277 (61%), Gaps = 23/277 (8%)
Query: 6 SSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENP 65
SS+ LD+ R++ME+NYML+YGAA SI LL ++ LL +LLPF AAYLDQ A K + +
Sbjct: 280 SSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLDQ-ASKTSLSSS 338
Query: 66 MMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEG 125
+ML+RLF N+DKLVSCD+PAD LW+ +L+FH ALV +PQ+A VV FA++LYHG W +
Sbjct: 339 LMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKA 398
Query: 126 VKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS-------- 177
V+FAR+ + + PE+S S SDE LA V+E ++D LT
Sbjct: 399 VEFAREHETSVIGYAPEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYL 458
Query: 178 ------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVL 231
SG VF+ KK R+V + F + ++ +ESY S K IDY +LGKGN E RFVL
Sbjct: 459 YPDFKFSGLVFIPKKKGRDVAEGF-MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVL 517
Query: 232 GKIILKTISGGLVAGEEEIDEEEMPEVLDKDSVENYL 268
GKIIL TI+ G V E + V K S N++
Sbjct: 518 GKIILDTITEGTVI-------EPLNSVKKKQSTRNHI 547
>gi|297832374|ref|XP_002884069.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329909|gb|EFH60328.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 761
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 162/253 (64%), Gaps = 16/253 (6%)
Query: 6 SSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENP 65
SS+ LD+ R++ME+NYML+YGAA SI LL ++ LL +LLPF AAYLDQ A + + +
Sbjct: 284 SSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLDQ-ASETSLSSS 342
Query: 66 MMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEG 125
+ML+RLF N+DKLVSCD+PAD LW+ +L+FH ALV +PQ+A VV FA++LYH W +
Sbjct: 343 LMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHRNWSKA 402
Query: 126 VKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS-------- 177
VKFAR+ V + PE+S FS SDE LA V+E ++D LT
Sbjct: 403 VKFAREHETSVVGYAPEVSKFSRKRSDEDLAEAVSEFTCLLKDTQYVLTDIEALREALYL 462
Query: 178 ------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVL 231
SG VF+ K+ R+V + L + +ESY S K IDY +LGKGN E RFVL
Sbjct: 463 YPDFKFSGLVFIPKRKGRDVAEGLARL-SDVESYESKKEGFSIDYLLLGKGNPCEVRFVL 521
Query: 232 GKIILKTISGGLV 244
GKIIL TI+ G+V
Sbjct: 522 GKIILDTITEGIV 534
>gi|449495173|ref|XP_004159755.1| PREDICTED: uncharacterized LOC101212579 [Cucumis sativus]
Length = 647
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 221/418 (52%), Gaps = 65/418 (15%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+H S SI LDKSR+MMELNYMLSYGAA S+ LL+R+ LL LLPFHAAYLD+Q +
Sbjct: 204 IHKFSPSITSLDKSRLMMELNYMLSYGAAVPSLYLLQRFKLLGSLLPFHAAYLDKQGIEK 263
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
++ + +MLM+LFFNLDKLVSC P++ +WV LL+FH ALV++PQ++ VV FA+ LYHG
Sbjct: 264 SSLSSVMLMKLFFNLDKLVSCAHPSNCNIWVALLAFHLALVNNPQNSLVVLAFAATLYHG 323
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------ 174
+W EGV +AR+++ + PEI+ ++ +S+E+LA VT AL VQ C+ LT
Sbjct: 324 EWNEGVNYAREKSLVEINLRPEITRSAKFKSEEKLAEGVTRFALKVQGCIAALTSKDCLL 383
Query: 175 --------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVE 226
++SG VFVS K R+V IF+VL + N R+ + D
Sbjct: 384 EAMSTFPASSNSGLVFVSNKTARDVAIIFEVLAKH-GNENIPDRNQNLRID--------- 433
Query: 227 TRFVLGKIILKTISGGLVAGEEEIDEEEMPEVLDKDSVENYLAKKNRKRGLQPSSAELKL 286
A +E + + D V+ L K N+K +PS +E++L
Sbjct: 434 ------------------APTKETSDSPV-----ADLVQEQLVKGNKKVRKRPSVSEVEL 470
Query: 287 KTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAVKNCQLPDKELKVRTTEKHKWI 346
K KK K K SI+ ++ N + E K V+ QLP ++ E + I
Sbjct: 471 KANKKYKLVRKEGSISDKVVENGRCI---NMTEMYKKGVEGSQLPLAPME----ESMEPI 523
Query: 347 ENS--CHFDQELSINEELVQKEGSQQLGEETQK--AAKTCQSPEEE----IKVNPEKI 396
S CH L + +E + +G E +K K Q +E +++NP K+
Sbjct: 524 LESRKCH---HLEVRATENMRENPESMGNEVKKIIPKKAFQKVTKELLHPVEINPRKM 578
>gi|357120849|ref|XP_003562137.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 553
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 150/255 (58%), Gaps = 16/255 (6%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ LSSSI +DKSR+ ME+ YMLS+GAAESSI LL +Y LL ILLP AAYL Q
Sbjct: 265 IRDLSSSIINIDKSRLAMEMKYMLSHGAAESSIRLLGKYGLLDILLPLQAAYLSHQIKGQ 324
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+++ +MLM+L NLDKL S DRP +LW+ LL+FH ALV+ PQDA V+ FAS++Y G
Sbjct: 325 SSDRNLMLMKLLANLDKLTSADRPCHCSLWLALLAFHSALVNSPQDAQVIKAFASLMYFG 384
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------ 174
W +KF + PV FVPE S + + L K + LA V V+ LT
Sbjct: 385 TWDSTIKFLKQDTGAPVTFVPEALQPSGTKLN-NLMEKTSHLASLVNCSVDTLTCLDALQ 443
Query: 175 -------KAS--SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLV 225
KAS SG VFVS K + IF L + + Y+ + H I+Y +L G+
Sbjct: 444 QSLARYPKASQFSGLVFVSNKERSRILGIFKGLDSDLSLYDGRRGMHGINYKLLDDGHTG 503
Query: 226 ETRFVLGKIILKTIS 240
E RFVLGK+I+ T+S
Sbjct: 504 EVRFVLGKVIMDTMS 518
>gi|218192024|gb|EEC74451.1| hypothetical protein OsI_09859 [Oryza sativa Indica Group]
Length = 558
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS SI +DK+R+MMELNY+LSYGAA SS+ LLR+Y LL LLPF AAY+ Q + +
Sbjct: 270 LSLSITDIDKARLMMELNYLLSYGAAASSLRLLRKYGLLDFLLPFQAAYMSDQMKDKSND 329
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWK 123
+MLM+L NLDKL+S DRP LW+ LL+FH ALV+ P DA V+ FA+++Y G W+
Sbjct: 330 TDLMLMKLLANLDKLLSADRPCPSCLWLALLTFHSALVNSPHDAQVIRAFAALMYFGSWE 389
Query: 124 EGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT--------- 174
V F P F+PE G S + E L + + LA V+ V+ LT
Sbjct: 390 GAVNFLNQDIGAPAPFIPETLGPSRSKL-ENLMEQTSHLASLVKSSVDTLTSIDALQQSL 448
Query: 175 ----KAS--SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
KAS SG V VS + V +IF+ L + SY + IDY +L G+ E R
Sbjct: 449 AKYSKASQVSGLVLVSSRERERVLRIFEGLDTDLTSYEGTRGMQEIDYKLLKDGHPGEVR 508
Query: 229 FVLGKIILKTISGGLVAGEEEIDEEEM 255
FVLG++I+ T+S L E D+ M
Sbjct: 509 FVLGQVIMDTMSEELPRVSTEYDQLNM 535
>gi|414864625|tpg|DAA43182.1| TPA: hypothetical protein ZEAMMB73_451476 [Zea mays]
Length = 556
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 149/253 (58%), Gaps = 14/253 (5%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ SSSI +DK+R+MME+NY++SYGAA S+ LLR+Y LL ILLPF +AYL +Q
Sbjct: 274 IRDFSSSINNIDKARLMMEMNYIMSYGAAAPSVRLLRKYGLLDILLPFQSAYLSEQMKGG 333
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+++ +MLM+L NLD+L+S DRP +LW+ LL+FH LV PQD V+ FA+VLY G
Sbjct: 334 SSDRHLMLMKLLSNLDRLLSADRPCHSSLWLALLAFHSTLVIYPQDTLVIRAFAAVLYFG 393
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESD---EQLA--VKVTELALSVQDCVNDLTK 175
W+ VKF R+ V F PE G S + D EQ + + ++ + C +DL +
Sbjct: 394 TWETTVKFLREEVGAEVPFAPETMGPSRTKLDCLKEQTSHLASLVNSSVDILTCPHDLEQ 453
Query: 176 A---------SSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVE 226
+ SG V S + + +F+ L + + SY+ + IDY L G+L E
Sbjct: 454 SLARFSEPLQFSGVVVASNNDRKKLSAVFEGLASDLHSYDGRRGMRGIDYSSLKLGDLAE 513
Query: 227 TRFVLGKIILKTI 239
RFVLGK+I+ T+
Sbjct: 514 VRFVLGKVIMDTM 526
>gi|115450525|ref|NP_001048863.1| Os03g0131400 [Oryza sativa Japonica Group]
gi|108706021|gb|ABF93816.1| polyA polymerase family protein, expressed [Oryza sativa Japonica
Group]
gi|113547334|dbj|BAF10777.1| Os03g0131400 [Oryza sativa Japonica Group]
gi|222624145|gb|EEE58277.1| hypothetical protein OsJ_09295 [Oryza sativa Japonica Group]
Length = 558
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS SI +DK+R+MMELNY+LSYGAA SS+ LLR+Y LL LLPF AAY+ Q + +
Sbjct: 270 LSLSITDIDKARLMMELNYLLSYGAAASSLRLLRKYGLLDFLLPFQAAYMSDQMKDKSND 329
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWK 123
+MLM+L NLDKL+S D+P LW+ LL+FH ALV+ P DA V+ FA+++Y G W+
Sbjct: 330 TDLMLMKLLANLDKLLSADQPCPSCLWLALLTFHSALVNSPHDAQVIRAFAALMYFGSWE 389
Query: 124 EGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT--------- 174
V F P F+PE G S + E L + + LA V+ V+ LT
Sbjct: 390 GAVNFLNQDIGAPAPFIPETLGPSRSKL-ENLMEQTSHLASLVKSSVDTLTSIDALQQSL 448
Query: 175 ----KAS--SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
KAS SG V VS + V +IF+ L + SY + IDY +L G+ E R
Sbjct: 449 AKYSKASQVSGLVLVSSRERERVLRIFEGLDTDLTSYEGTRGMQEIDYKLLKDGHPGEVR 508
Query: 229 FVLGKIILKTISGGLVAGEEEIDEEEM 255
FVLG++I+ T+S L E D+ M
Sbjct: 509 FVLGQVIMDTMSEELPRVSTEYDQLNM 535
>gi|147844279|emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
Length = 693
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 175/332 (52%), Gaps = 77/332 (23%)
Query: 90 WVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEGVKFARDRAKEPVKFVPEISGFSEI 149
WVGLL+FH ALV+ PQDA VVW +SVLYHGKW EGVKFAR A P+ F PEI +
Sbjct: 343 WVGLLAFHMALVNKPQDASVVWTLSSVLYHGKWTEGVKFARKHALAPISFSPEILVECDS 402
Query: 150 ESDEQLAVKVTELALSVQDC------VNDLTKASSGY------------------VFVSK 185
+SDE+LA +V+ELA VQDC DL+ + S Y VFV K
Sbjct: 403 KSDEELAERVSELASLVQDCAISSTKTGDLSASMSDYPDYPCTGLLIWLKNVVLQVFVQK 462
Query: 186 KIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVLGKIILKTISGGLV- 244
++ V IF+VLVN IESY G+ S IDY +LGKG+L ETRFVLGK+I+ T+S LV
Sbjct: 463 RMAERVAHIFNVLVNGIESYEEGRESPDIDYYLLGKGDLRETRFVLGKVIMDTMSSELVQ 522
Query: 245 AGEEEIDE---------EEMPEVLDKDS------VENYL--AKKNRKRGLQPSSAELKLK 287
G E ++E E+ PE L++D V +L AK+++KR L + EL+ +
Sbjct: 523 MGTEVLEEKNQLHMSYNEQKPEALEQDCHPILYEVVKHLVVAKEDKKRSLSSFNPELQQE 582
Query: 288 TAKKCKWTE-KFSSINHELS--------------MNKEDVVPKEEVEEI----------- 321
KK K + +F + E++ K+++ E+ +E+
Sbjct: 583 RGKKQKLVDIEFDPLEQEIAKENQKEKNNKHQEIAKKQEMAENEQHQEMAKKHLKMVGKE 642
Query: 322 ---------HKAVKNCQLPDKELKVRTTEKHK 344
HK KN LP ++L + E+HK
Sbjct: 643 NLQKSAKRQHKVAKNSHLPQQKLARKQNEQHK 674
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 50 AAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVG 92
AYL QQ + +A++ MM M+LFFNLDKLV+CDRP D +LW G
Sbjct: 168 GAYLAQQTTEPSAQHSMMFMKLFFNLDKLVTCDRPCDCSLWAG 210
>gi|414864626|tpg|DAA43183.1| TPA: hypothetical protein ZEAMMB73_451476 [Zea mays]
Length = 477
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ SSSI +DK+R+MME+NY++SYGAA S+ LLR+Y LL ILLPF +AYL +Q
Sbjct: 274 IRDFSSSINNIDKARLMMEMNYIMSYGAAAPSVRLLRKYGLLDILLPFQSAYLSEQMKGG 333
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+++ +MLM+L NLD+L+S DRP +LW+ LL+FH LV PQD V+ FA+VLY G
Sbjct: 334 SSDRHLMLMKLLSNLDRLLSADRPCHSSLWLALLAFHSTLVIYPQDTLVIRAFAAVLYFG 393
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT 174
W+ VKF R+ V F PE G S + D L + + LA V V+ LT
Sbjct: 394 TWETTVKFLREEVGAEVPFAPETMGPSRTKLD-CLKEQTSHLASLVNSSVDILT 446
>gi|449484884|ref|XP_004157007.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 532
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 144/251 (57%), Gaps = 16/251 (6%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS S+ +LDK R++ME+NYML++G+AE+S+ LL R+ LL+ILLP A+Y Q +
Sbjct: 266 LSCSVLKLDKGRLLMEMNYMLAFGSAEASLRLLWRFGLLEILLPIQASYFVSQGFRRRDA 325
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKW 122
ML+ LF NLDK V+ +RP +LW+ LL+FH+ALV PQD VV F+ ++ G
Sbjct: 326 RSNMLLILFSNLDKFVAPNRPCHSSLWIALLAFHKALVDQPQDPVVVAAFSLAIHSGGSL 385
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS----- 177
E V+ A++ ++ V F EI + ESD L +V +LA SV + +T +
Sbjct: 386 YEAVEIAQNISQPHVSF-HEIVESNHKESDYSLVEQVIDLADSVNSVLWKMTNSQYVSRA 444
Query: 178 ---------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
S VF+S+ + +V +IFD + E+ + KRS I++D L GNL E R
Sbjct: 445 MIKYPQAPWSDLVFISQSLSISVCKIFDCVRRGNETGSVPKRSRRINHDSLAMGNLSEVR 504
Query: 229 FVLGKIILKTI 239
V +I+ T+
Sbjct: 505 HVFARIVFDTV 515
>gi|449468890|ref|XP_004152154.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 539
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 144/251 (57%), Gaps = 16/251 (6%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS S+ +LDK R++ME+NYML++G+AE+S+ LL R+ LL+ILLP A+Y Q +
Sbjct: 273 LSCSVLKLDKGRLLMEMNYMLAFGSAEASLRLLWRFGLLEILLPIQASYFVSQGFRRRDA 332
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKW 122
ML+ LF NLDK V+ +RP +LW+ LL+FH+ALV PQD VV F+ ++ G
Sbjct: 333 RSNMLLILFSNLDKFVAPNRPCHSSLWIALLAFHKALVDQPQDPVVVAAFSLAIHSGGSL 392
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKAS----- 177
E V+ A++ ++ V F EI + ESD L +V +LA SV + +T +
Sbjct: 393 YEAVEIAQNISQPHVSF-HEIVESNHKESDYSLVEQVIDLADSVNSVLWKMTNSQYVSRA 451
Query: 178 ---------SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
S VF+S+ + +V +IFD + E+ + KRS I++D L GNL E R
Sbjct: 452 MIKYPQAPWSDLVFISQSLSISVCKIFDCVRRGNETGSVPKRSRRINHDSLAMGNLSEVR 511
Query: 229 FVLGKIILKTI 239
V +I+ T+
Sbjct: 512 HVFARIVFDTV 522
>gi|225425222|ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
gi|296088167|emb|CBI35659.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 143/251 (56%), Gaps = 15/251 (5%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS S+ RLDK RI+ME+NYML+YG+AE+S+ LL ++ LL+ILLP AAYL Q + +
Sbjct: 271 LSCSVLRLDKGRILMEMNYMLAYGSAEASLRLLWKFGLLEILLPIQAAYLVSQGFRRRDQ 330
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKW 122
ML+ LF NLD+LV+ DRP +LW+G+L+FH+ALV P+ VV F+ +++ G
Sbjct: 331 RSNMLLSLFSNLDRLVAPDRPCHNSLWIGMLAFHKALVDQPRHPMVVAAFSLAVHNGGSL 390
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------KA 176
E V+ AR ++ + E+ +++SDE L ++ +LA SV+ + +T +A
Sbjct: 391 SEAVEIARRISQPHDQSFSELLEPQDLDSDESLIDEIMDLAASVKSALMKMTDEHFVSQA 450
Query: 177 SSGY--------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
S Y VF+S +IF + E K+ IDY+ L G+L E R
Sbjct: 451 MSKYPRAPYSDLVFISLASFLRASKIFQCVQGGAEKGFVPKQGSRIDYEFLALGSLREVR 510
Query: 229 FVLGKIILKTI 239
V +I+ T+
Sbjct: 511 HVFARIVFDTV 521
>gi|242042361|ref|XP_002468575.1| hypothetical protein SORBIDRAFT_01g048240 [Sorghum bicolor]
gi|241922429|gb|EER95573.1| hypothetical protein SORBIDRAFT_01g048240 [Sorghum bicolor]
Length = 353
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 122/226 (53%), Gaps = 17/226 (7%)
Query: 29 AESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENPMMLMRLFFNLDKLVSCDRPADYT 88
A S+ LLR+Y LL ILLPF AAYL Q +++ +MLM+L NLD+L+S DRP +
Sbjct: 93 AGPSVRLLRKYGLLDILLPFQAAYLSDQLKGGSSDRDLMLMKLLANLDRLLSADRPCHSS 152
Query: 89 LWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEGVKFARDRAKEPVKFVPEISGFSE 148
LW+ LL FH ALV PQD V+ FA++LY G W+ VKF + E V F PE G S
Sbjct: 153 LWLALLVFHSALVISPQDTLVIRAFAAMLYFGTWETTVKFLEEVGPE-VSFAPETMGPSR 211
Query: 149 IESDEQLAVKVTELALSVQDCVNDLT---------------KASSGYVFVSKKIERNVQQ 193
+ D+ L + + LA V V+ LT SG V S + +
Sbjct: 212 TKLDD-LMEQTSHLASLVNSSVDTLTCLHGLEQSLARFSEPPQFSGVVLTSNNDRKRLSV 270
Query: 194 IFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVLGKIILKTI 239
IF+ L + + SY+ + IDY L G+ E RFVLGK+I+ T+
Sbjct: 271 IFEGLASDLLSYDERRGMRGIDYWSLKHGDPAEVRFVLGKVIMDTM 316
>gi|224075475|ref|XP_002304649.1| predicted protein [Populus trichocarpa]
gi|222842081|gb|EEE79628.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 136/252 (53%), Gaps = 16/252 (6%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS S+ RLDK RI++ELNYM +YG+AE+S+ L+ R+ LL+ILLP A+Y Q + E
Sbjct: 258 LSHSVLRLDKGRILLELNYMFAYGSAEASLRLMWRFGLLEILLPIQASYFVSQGFRRRDE 317
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKW 122
ML+ LF NLD+LV+ DRP +LW+G+ +FH+ALV PQD VV F+ ++ G
Sbjct: 318 RSNMLLSLFSNLDRLVAPDRPCHSSLWLGIFAFHKALVDQPQDPLVVTAFSLAVHSGGSL 377
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTKA------ 176
E V+ AR ++ PE+ +S+ L K A V+ + ++T
Sbjct: 378 LESVEIARRISQPYQSSFPELLEAQNPDSNNALVHKTINFAALVKTALCNMTDGCYVSKA 437
Query: 177 --------SSGYVFVSKKIERNVQQIFD-VLVNSIESYNSGKRSHIIDYDMLGKGNLVET 227
SS VF+ + V +IF+ V +E+ ++ IDY+ L G+L E
Sbjct: 438 MAKYPKAPSSDLVFIPMALFLRVSKIFECVRRRGMETRFVRRQGRKIDYESLAMGSLEEV 497
Query: 228 RFVLGKIILKTI 239
R V +I+ T+
Sbjct: 498 RHVFARIVFDTV 509
>gi|297744918|emb|CBI38415.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 81/104 (77%)
Query: 66 MMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEG 125
MM M+LFFNLDKLV+CDRP D +LWVGLL+FH ALV+ PQDA VVW +SVLYHGKW EG
Sbjct: 1 MMFMKLFFNLDKLVTCDRPCDCSLWVGLLAFHMALVNKPQDASVVWTLSSVLYHGKWTEG 60
Query: 126 VKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDC 169
VKFAR A P+ F PEI + +SDE+LA +V+ELA VQDC
Sbjct: 61 VKFARKHALAPISFSPEILVECDSKSDEELAERVSELASLVQDC 104
>gi|297845758|ref|XP_002890760.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336602|gb|EFH67019.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 534
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 145/255 (56%), Gaps = 19/255 (7%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ LL R+ L++ILLP A+YL Q +
Sbjct: 276 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 335
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-HGKW 122
ML+ LF NLD+LV+ DRP + LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 336 RSNMLLSLFRNLDRLVAPDRPCNEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 395
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDC---VND---LT 174
E + AR +K+ E+SG + +S+ +L+ +V +LA S++ +ND +
Sbjct: 396 SEAIAIARSNSKQHNSHFQELSGHEKDSADSESKLSQQVIKLAESIRSAARKLNDRDYIA 455
Query: 175 KASSGY--------VFVSKKIERNVQQIFDVLV--NSIESYNSGKRSHIIDYDMLGKGNL 224
A S Y VF+S+ + V+++F + + E+ + I+Y L G+
Sbjct: 456 NAMSKYPQAPGSDMVFLSRPMLERVEKMFGSVRRKRNQETEDVPSLERRINYKSLALGDF 515
Query: 225 VETRFVLGKIILKTI 239
ETR V +I+ TI
Sbjct: 516 HETRRVFARIVFDTI 530
>gi|224119782|ref|XP_002318161.1| predicted protein [Populus trichocarpa]
gi|222858834|gb|EEE96381.1| predicted protein [Populus trichocarpa]
Length = 515
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 26/257 (10%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS + RLDK RIMME+NYML+YG+AE+S+ +L ++ LL++LLP AAY + K
Sbjct: 261 NLSRLLLRLDKPRIMMEMNYMLAYGSAEASLRILWKFGLLELLLPIQAAYFVRDGFKRRD 320
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF NLDKL++ DRP +LWVG+L+FH+AL P+D VV F +++ G
Sbjct: 321 KRSNMLLCLFSNLDKLLAPDRPCHSSLWVGILAFHKALADQPRDPMVVAAFCLAVHNGGD 380
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT-- 174
GV AR K P F E+ + L K V + A SV+ +N +T
Sbjct: 381 ILGGVNMARKITK------PHDISFHELTKPQDLDSKMLIDEVVDFAASVKQVLNWMTDE 434
Query: 175 ------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKG 222
S VF + V +IF+ + E K+ IDY+MLG G
Sbjct: 435 YYVSLAMAEYPQAPYSDLVFFPLAVYLRVCRIFECSRDGPEKGFLPKQGRKIDYEMLGLG 494
Query: 223 NLVETRFVLGKIILKTI 239
L E R +++ T+
Sbjct: 495 GLQEVRHTFARVVFDTV 511
>gi|357520559|ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula]
gi|355524590|gb|AET05044.1| Poly(A) polymerase [Medicago truncatula]
Length = 543
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 146/253 (57%), Gaps = 20/253 (7%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LS SI RLDK R++ME+NYML+YG+ E+S+ LL ++ LL ILLPF A Y + + +
Sbjct: 286 LSYSILRLDKGRLLMEMNYMLAYGSGEASLRLLWKFGLLDILLPFQALYFVRHGFRRRDK 345
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKW 122
ML+ LFFNLDKL++ + P +LWVG+L+ H++L P++ V+ F+ +++ G
Sbjct: 346 RTNMLLSLFFNLDKLLAPNSPCHSSLWVGILALHKSLSDQPRNPLVIAAFSLAVHNGGNL 405
Query: 123 KEGVKFARDRAKEP--VKFVPEISGFSEIES--------DEQLAVKVTELAL----SVQD 168
E V AR R +P ++F PE+S ++ + D +VKV+ L + SV
Sbjct: 406 LEAVDIAR-RINKPHDIRF-PELSDPCDLNAKALENEILDLVESVKVSLLQMTSRHSVAR 463
Query: 169 CVNDLTKAS-SGYVFVSKKIERNVQQIFDVL-VNSIESYNSGKRSHIIDYDMLGKGNLVE 226
+ D +A S VF+ + IFD L V+S + + S K+S IDY+ L +G+L E
Sbjct: 464 AMVDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLS-KKSRKIDYESLARGDLPE 522
Query: 227 TRFVLGKIILKTI 239
R + +++ T+
Sbjct: 523 IRHLFARVVFDTV 535
>gi|297808367|ref|XP_002872067.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297317904|gb|EFH48326.1| polynucleotide adenylyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 533
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 142/261 (54%), Gaps = 30/261 (11%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS ++RLDK RI+ME+NYML+YG+AE+S+ LL ++ LL+ILLP AAYL + +
Sbjct: 270 NLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGLLEILLPIQAAYLARSGFRRRD 329
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF NLDKL++ DRP +LW+ +L+FH+AL P+ VV F+ +++ G
Sbjct: 330 KRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADQPRSPLVVAAFSLAVHNCGD 389
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT-- 174
E VK + A+ K S F +E +E L + V +L S++D +N +T
Sbjct: 390 ILEAVKITKKIARPHDK-----SFFELVEPEENLDFQTLLDEVMDLDASIKDALNQMTDG 444
Query: 175 ----KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYNS----GKRSHIIDYDM 218
KA S Y VF+ ++ +IFD V E++ K+ I+Y
Sbjct: 445 YYISKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDC-VKKDETHTQMEFEAKKGSKIEYGS 503
Query: 219 LGKGNLVETRFVLGKIILKTI 239
L G+ E R V +++ T+
Sbjct: 504 LYSGDFPEIRHVFARVVFDTV 524
>gi|42571667|ref|NP_973924.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
gi|194272240|gb|ACF37205.1| At1g28090 [Arabidopsis thaliana]
gi|222424128|dbj|BAH20023.1| AT1G28090 [Arabidopsis thaliana]
gi|332192790|gb|AEE30911.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
Length = 505
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 141/259 (54%), Gaps = 27/259 (10%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ LL R+ L++ILLP A+YL Q +
Sbjct: 247 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 306
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-HGKW 122
ML+ LF NLD+LV+ DRP LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 307 RSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 366
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDCVNDL------T 174
E + AR +K+ E+S + +S+ +++ +V +LA S++ L
Sbjct: 367 SEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNRDYIA 426
Query: 175 KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHI------IDYDMLG 220
A S Y VF+S+ + V+++F ++ + +R + I+Y L
Sbjct: 427 NAMSKYPQAPGSDMVFLSRLMLERVEKMF----GNVRRKGNQERDDVPSLERRINYKSLA 482
Query: 221 KGNLVETRFVLGKIILKTI 239
G+ ETR V +I+ TI
Sbjct: 483 LGDFHETRRVFARIVFDTI 501
>gi|145324048|ref|NP_001077613.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
gi|332192791|gb|AEE30912.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
Length = 478
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 141/259 (54%), Gaps = 27/259 (10%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ LL R+ L++ILLP A+YL Q +
Sbjct: 220 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 279
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-HGKW 122
ML+ LF NLD+LV+ DRP LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 280 RSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 339
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDCVNDL------T 174
E + AR +K+ E+S + +S+ +++ +V +LA S++ L
Sbjct: 340 SEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNRDYIA 399
Query: 175 KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHI------IDYDMLG 220
A S Y VF+S+ + V+++F ++ + +R + I+Y L
Sbjct: 400 NAMSKYPQAPGSDMVFLSRLMLERVEKMF----GNVRRKGNQERDDVPSLERRINYKSLA 455
Query: 221 KGNLVETRFVLGKIILKTI 239
G+ ETR V +I+ TI
Sbjct: 456 LGDFHETRRVFARIVFDTI 474
>gi|42562367|ref|NP_174130.2| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
gi|332192789|gb|AEE30910.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
thaliana]
Length = 541
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 141/259 (54%), Gaps = 27/259 (10%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ LL R+ L++ILLP A+YL Q +
Sbjct: 283 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 342
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-HGKW 122
ML+ LF NLD+LV+ DRP LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 343 RSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 402
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDCVNDL------T 174
E + AR +K+ E+S + +S+ +++ +V +LA S++ L
Sbjct: 403 SEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNRDYIA 462
Query: 175 KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYNSGKRSHI------IDYDMLG 220
A S Y VF+S+ + V+++F ++ + +R + I+Y L
Sbjct: 463 NAMSKYPQAPGSDMVFLSRLMLERVEKMF----GNVRRKGNQERDDVPSLERRINYKSLA 518
Query: 221 KGNLVETRFVLGKIILKTI 239
G+ ETR V +I+ TI
Sbjct: 519 LGDFHETRRVFARIVFDTI 537
>gi|356507386|ref|XP_003522448.1| PREDICTED: uncharacterized protein LOC100796540 [Glycine max]
Length = 540
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 136/254 (53%), Gaps = 20/254 (7%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LSSS+ LDK R++ME+NYML++G+ E+S+ LL ++ LL ILLPF AAY Q +
Sbjct: 270 NLSSSVLSLDKGRLLMEMNYMLAFGSGEASLRLLWKFGLLDILLPFQAAYFAQHGFQRRD 329
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
ML+ LF NLDKL++ +RP +LWVG+L+ H+AL P++ V F+ +++ G
Sbjct: 330 RRTNMLLSLFSNLDKLLAPNRPCHNSLWVGILALHKALSDRPRNPLAVAAFSLAVHNGGN 389
Query: 122 WKEGVKFARDRAKEP--VKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLTK---- 175
E V A +P V+F PE+ S +++ E L ++ +LA SV+ + +T
Sbjct: 390 LLEAVSMA-GMINKPHDVRF-PELLDPSGLDA-EALEAEILDLAESVRGTILQMTNEYFV 446
Query: 176 ----------ASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLV 225
S VF+ + V +FD + S K+ IDY L GNL
Sbjct: 447 SQAMADYPQAPRSNLVFIPITLYVKVYNMFDCVRRSTVKKFLSKQHRKIDYQSLALGNLQ 506
Query: 226 ETRFVLGKIILKTI 239
E R V +I+ T+
Sbjct: 507 EVRHVFARIVFDTV 520
>gi|8809691|dbj|BAA97232.1| unnamed protein product [Arabidopsis thaliana]
Length = 499
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 139/260 (53%), Gaps = 26/260 (10%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +LS ++RLDK RI+ME+NYML+YG+AE+S+ LL ++ +L+ILLP AAYL + +
Sbjct: 236 IKNLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRR 295
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH- 119
+ ML+ LF NLDKL++ DRP +LW+ +L+FH+AL P+ VV F+ +++
Sbjct: 296 RDKRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADKPRSPIVVAAFSLAVHNC 355
Query: 120 GKWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT 174
G E V+ + + K S F +E +E L + V +L S++D +N +T
Sbjct: 356 GDILEAVEITKKITRPHDK-----SFFELVEPEENLDFQTLLDEVMDLDASIEDALNQMT 410
Query: 175 ------KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYN-SGKRSHIIDYDML 219
KA S Y VF+ ++ +IFD + N K+ I+Y L
Sbjct: 411 DAYFISKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRIGFEAKQGSKIEYGSL 470
Query: 220 GKGNLVETRFVLGKIILKTI 239
G E R V +++ T+
Sbjct: 471 NSGYFPEIRHVFARVVFDTV 490
>gi|18377862|gb|AAL67117.1| AT5g23690/MQM1_4 [Arabidopsis thaliana]
gi|22137254|gb|AAM91472.1| AT5g23690/MQM1_4 [Arabidopsis thaliana]
Length = 527
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 26/258 (10%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS ++RLDK RI+ME+NYML+YG+AE+S+ LL ++ +L+ILLP AAYL + +
Sbjct: 266 NLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRRRD 325
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF NLDKL++ DRP +LW+ +L+FH+AL P+ VV F+ +++ G
Sbjct: 326 KRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADKPRSPIVVAAFSLAVHNCGD 385
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT-- 174
E V+ + + K S F +E +E L + V +L S++D +N +T
Sbjct: 386 ILEAVEITKKITRPHDK-----SFFELVEPEENLDFQTLLDEVMDLDASIEDALNQMTDA 440
Query: 175 ----KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYN-SGKRSHIIDYDMLGK 221
KA S Y VF+ ++ +IFD + N K+ I+Y L
Sbjct: 441 YFISKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRIGFEAKQGSKIEYGSLNS 500
Query: 222 GNLVETRFVLGKIILKTI 239
G E R V +++ T+
Sbjct: 501 GYFPEIRHVFARVVFDTV 518
>gi|22327016|ref|NP_197758.2| Polynucleotide adenylyltransferase family protein [Arabidopsis
thaliana]
gi|332005816|gb|AED93199.1| Polynucleotide adenylyltransferase family protein [Arabidopsis
thaliana]
Length = 527
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 26/258 (10%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS ++RLDK RI+ME+NYML+YG+AE+S+ LL ++ +L+ILLP AAYL + +
Sbjct: 266 NLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRRRD 325
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF NLDKL++ DRP +LW+ +L+FH+AL P+ VV F+ +++ G
Sbjct: 326 KRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADKPRSPIVVAAFSLAVHNCGD 385
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT-- 174
E V+ + + K S F +E +E L + V +L S++D +N +T
Sbjct: 386 ILEAVEITKKITRPHDK-----SFFELVEPEENLDFQTLLDEVMDLDASIEDALNQMTDA 440
Query: 175 ----KASSGY--------VFVSKKIERNVQQIFDVLVNSIESYN-SGKRSHIIDYDMLGK 221
KA S Y VF+ ++ +IFD + N K+ I+Y L
Sbjct: 441 YFISKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRIGFEAKQGSKIEYGSLNS 500
Query: 222 GNLVETRFVLGKIILKTI 239
G E R V +++ T+
Sbjct: 501 GYFPEIRHVFARVVFDTV 518
>gi|356511530|ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
Length = 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 16/252 (6%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS S+ RLD+SR++ME+NYML+YG+ E+S+ LL R+ LL ILLPF AAY + +
Sbjct: 269 NLSYSVLRLDRSRLLMEINYMLAYGSGEASLRLLWRFGLLDILLPFQAAYFVRGGFRRRD 328
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ +L+ F N+DKL++ +RP +LWV +L+ H+AL P+D+ VV F+ L++ G
Sbjct: 329 KRTNLLLSFFSNVDKLLAPNRPCHSSLWVVILALHKALSDKPRDSSVVAAFSLALHNGGN 388
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQ-------------D 168
E + AR K PE+ S ++ +E L ++ +LA SV+
Sbjct: 389 LSEAISIARRINKTHDARFPELLDPSGLD-EEDLEAEILDLAESVKGSLLQMKDRHFVSG 447
Query: 169 CVNDLTKAS-SGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVET 227
+ D +A S V + + FD + S K+ IDY+ L +G+L+E
Sbjct: 448 AMADYPQAPHSDLVLIPIPMYLRALNFFDCVRVSASKNFLSKQGRQIDYESLARGDLLEV 507
Query: 228 RFVLGKIILKTI 239
R V +I+ T+
Sbjct: 508 RHVFARIVFDTV 519
>gi|356527592|ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
Length = 527
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 138/253 (54%), Gaps = 18/253 (7%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS S+ RLDK R+ ME+NYML+YG+ E+S+ LL R+ LL ILLPF AAY +
Sbjct: 269 NLSYSVLRLDKGRLWMEINYMLAYGSGEASLRLLWRFGLLDILLPFQAAYFVCGGFRRRD 328
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ +L+ F N+DKL++ +RP +LWV +L+ H+AL P+D+ VV F+ L++ G
Sbjct: 329 KRTNLLLSFFSNVDKLLAPNRPCHSSLWVAILALHKALSDKPRDSSVVAAFSLALHNGGN 388
Query: 122 WKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT------- 174
E + AR K PE+ S ++ +E L ++ +LA SV+ + +T
Sbjct: 389 LSEAINIARRINKAHDARFPELLDPSGLD-EENLEAEILDLAESVKGSLLQMTDRHLVSG 447
Query: 175 -------KASSGYVFVSKKIERNVQQIFDVL-VNSIESYNSGKRSHIIDYDMLGKGNLVE 226
S V + + FD + V++ ++Y S K+ IDY+ L +G+L+E
Sbjct: 448 AMADYPQAPHSNLVLIPLSMFLKALNFFDCVNVSTGKNYLS-KQGRQIDYESLARGDLLE 506
Query: 227 TRFVLGKIILKTI 239
R V +I+ T+
Sbjct: 507 VRHVFARIVFDTV 519
>gi|224134120|ref|XP_002321741.1| predicted protein [Populus trichocarpa]
gi|222868737|gb|EEF05868.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 133/259 (51%), Gaps = 26/259 (10%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +LS S+ RLD RIMME+NYML+YG+AE+S+ +L ++ LL++LLPF AAY + K
Sbjct: 223 IKNLSRSLLRLDNQRIMMEMNYMLAYGSAEASLRILWKFGLLELLLPFQAAYFVRDGFKR 282
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH- 119
+ ML+ LF NLDK ++ DRP +LWVG+L+FH+AL P+D VV F +++
Sbjct: 283 QDKRSNMLLCLFSNLDKHLAPDRPCHNSLWVGILAFHKALSDQPRDPMVVAAFCLAVHNG 342
Query: 120 GKWKEGVKFARDRAKEPVKFVPEISGFSEIE-----SDEQLAVKVTELALSVQDCVNDLT 174
G GVK + K P F E+ + E L +V + A SV+ + +T
Sbjct: 343 GDILGGVKMVKKFTK------PHDVSFHELSEPQNLNSEALVDEVVDFAASVKQVLYWMT 396
Query: 175 --------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLG 220
S VF + V +IF+ + K+ I+Y+ML
Sbjct: 397 DEYCVSQAMAEYPQAPCSDLVFFPLAVYLKVCRIFECSREGSQKVFMPKQGRKINYEMLA 456
Query: 221 KGNLVETRFVLGKIILKTI 239
G+L E R +++ T+
Sbjct: 457 LGSLQEVRHTFARVVFDTV 475
>gi|255540089|ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative [Ricinus communis]
Length = 524
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 16/251 (6%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
+ SI RLDK R++ME+NYML+YG++E+S+ LL ++ LL+ILLP AAY K +
Sbjct: 269 FAHSILRLDKGRLLMEMNYMLAYGSSEASLRLLWKFGLLEILLPIQAAYFVHCGFKRRDK 328
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGK-W 122
ML+ L N+DKL++ DRP LW+G+L+FH+AL P+D VV F +++G
Sbjct: 329 RSNMLLSLLSNMDKLLAPDRPCHSCLWIGILAFHKALSEQPRDPLVVAAFCLAVHNGGDM 388
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT-------- 174
E V A+ K E+ ++++D QL +V +LA S++ ++ +T
Sbjct: 389 SEAVNIAKRIDKPHDMSFHELCKPGDMDTD-QLVDEVMDLAQSIKRVLSMMTDEHYVSQA 447
Query: 175 ------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVETR 228
S VF+S + V ++F+ + E K+ I+Y +L G+L E R
Sbjct: 448 MAEYPQAPYSDLVFISFALYLRVGRVFECVRQGKEKGFVPKQGGKINYQLLALGSLKEVR 507
Query: 229 FVLGKIILKTI 239
+I+ T+
Sbjct: 508 HTFARIVFDTV 518
>gi|12322982|gb|AAG51472.1|AC069471_3 hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
LSSS+ RLD SRI ME+NYML+YG+AE+S+ LL R+ L++ILLP A+YL Q +
Sbjct: 241 LSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFRRRDG 300
Query: 64 NPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-HGKW 122
ML+ LF NLD+LV+ DRP LW+G+L+FH+ALV P+D VV F +Y
Sbjct: 301 RSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYSEVSL 360
Query: 123 KEGVKFARDRAKEPVKFVPEISGFSE--IESDEQLAVKVTELALSVQDCVNDLT 174
E + AR +K+ E+S + +S+ +++ +V +LA S++ L
Sbjct: 361 SEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLN 414
>gi|357163185|ref|XP_003579651.1| PREDICTED: uncharacterized protein LOC100821667 [Brachypodium
distachyon]
Length = 541
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 133/259 (51%), Gaps = 25/259 (9%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK R++ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 275 VRTLACSVARLDKGRLLMEVNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTHFKR 334
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ +L+FH+ALV P+D VV FA +Y G
Sbjct: 335 KDKGTNMLLILFSKLDSFLAPNRPCHNSLWISILAFHEALVRQPRDPLVVATFALAMYLG 394
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT- 174
+ A D + + +GFSE + SD+ L +V LA S++ + ++T
Sbjct: 395 G---DLSLAVDIGQSINR--RHDAGFSELLEPQVWSDKHLVAEVQGLATSMRRALTEMTD 449
Query: 175 -------------KASSGYVFVSKKIERNVQQIFDVLVNS-IESYNSGKRSHIIDYDMLG 220
SS VF+ + V ++ + + + E KR IDY L
Sbjct: 450 EYYVANAMAKIPQAPSSDLVFIPLQAYLKVLKLIECVQHGKKECGYEPKRDGNIDYHSLS 509
Query: 221 KGNLVETRFVLGKIILKTI 239
G E R + +I TI
Sbjct: 510 HGTPAEVRNLFTLVIFDTI 528
>gi|125548115|gb|EAY93937.1| hypothetical protein OsI_15711 [Oryza sativa Indica Group]
Length = 542
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 33/263 (12%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 276 VRTLACSVARLDKGRILMEINYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 335
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ +L+ H+ALV P+D VV FA LY G
Sbjct: 336 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISILALHEALVRQPRDPLVVATFALALYLG 395
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLTK 175
+ A D K + +GFSE + D+ L +V LA+S++ + ++T
Sbjct: 396 G---DMSLALDIGKSINR--QHNTGFSELLEPQVWDDKHLVGEVQSLAVSMRRALTEMTD 450
Query: 176 ASSGYVFVSKKIERNVQ-----------QIFDVLVNSIESYNSGKRSHI--------IDY 216
FV+ + + Q Q + ++ IE GK+ H IDY
Sbjct: 451 E----YFVANAMAKIPQAPSSDLVFIPLQAYLKVLKLIECVQHGKKEHGYEPKRDGNIDY 506
Query: 217 DMLGKGNLVETRFVLGKIILKTI 239
L G E R V ++ T+
Sbjct: 507 HDLSYGTPAEVRNVFTLVVFDTL 529
>gi|115458124|ref|NP_001052662.1| Os04g0395900 [Oryza sativa Japonica Group]
gi|21742315|emb|CAD40772.1| OSJNBb0039F02.3 [Oryza sativa Japonica Group]
gi|113564233|dbj|BAF14576.1| Os04g0395900 [Oryza sativa Japonica Group]
gi|215767631|dbj|BAG99859.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 33/263 (12%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 276 VRTLACSVARLDKGRILMEINYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 335
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ +L+ H+ALV P+D VV FA LY G
Sbjct: 336 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISILALHEALVRQPRDPLVVATFALALYLG 395
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLTK 175
+ A D K + +GFSE + D+ L +V LA+S++ + ++T
Sbjct: 396 G---DMSLALDIGKSINR--QHNTGFSELLEPQVWDDKHLVGEVQSLAVSMRRALTEMTD 450
Query: 176 ASSGYVFVSKKIERNVQ-----------QIFDVLVNSIESYNSGKRSHI--------IDY 216
FV+ + + Q Q + ++ IE GK+ H IDY
Sbjct: 451 E----YFVANAMAKIPQAPSSDLVFIPLQAYLKVLKLIECVQHGKKEHGYEPKRDGNIDY 506
Query: 217 DMLGKGNLVETRFVLGKIILKTI 239
L G E R V ++ T+
Sbjct: 507 HDLSYGTPAEVRNVFTLVVFNTL 529
>gi|222628784|gb|EEE60916.1| hypothetical protein OsJ_14629 [Oryza sativa Japonica Group]
Length = 555
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 33/263 (12%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 289 VRTLACSVARLDKGRILMEINYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 348
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ +L+ H+ALV P+D VV FA LY G
Sbjct: 349 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISILALHEALVRQPRDPLVVATFALALYLG 408
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLTK 175
+ A D K + +GFSE + D+ L +V LA+S++ + ++T
Sbjct: 409 G---DMSLALDIGKSINR--QHNTGFSELLEPQVWDDKHLVGEVQSLAVSMRRALTEMTD 463
Query: 176 ASSGYVFVSKKIERNVQ-----------QIFDVLVNSIESYNSGKRSHI--------IDY 216
FV+ + + Q Q + ++ IE GK+ H IDY
Sbjct: 464 E----YFVANAMAKIPQAPSSDLVFIPLQAYLKVLKLIECVQHGKKEHGYEPKRDGNIDY 519
Query: 217 DMLGKGNLVETRFVLGKIILKTI 239
L G E R V ++ T+
Sbjct: 520 HDLSYGTPAEVRNVFTLVVFNTL 542
>gi|449501476|ref|XP_004161378.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 571
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 31/259 (11%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS + L+K+R+ ME+NY+LSYG+AE+S+ LL +Y LL+ILLP AAY + + +
Sbjct: 319 NLSCLVFTLNKARLQMEMNYLLSYGSAEASLRLLWKYGLLEILLPIQAAYFIRNGFRRSD 378
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF +LDKL++ +RP +LWV +L+ H AL P+ VV F +++ G
Sbjct: 379 KGSNMLLSLFSSLDKLLAPNRPCHSSLWVAVLALHVALSDQPRSPLVVAAFGLAVHNGGN 438
Query: 122 WKEGVKFAR--DRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT 174
E + A+ +RA + F E+ E L V+ V +L V+ ++ +T
Sbjct: 439 MMEAISIAKSINRAHN--------ANFCELLEPENLEVQALIDEVMDLTTFVKAALHKMT 490
Query: 175 --------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLG 220
+S VF+ + V +IF+ +V E KR I+Y+ L
Sbjct: 491 DEHFVSLALETYPQAPASDLVFIPLVVYLKVCKIFECVVEGAERGFVPKRGK-INYECLA 549
Query: 221 KGNLVETRFVLGKIILKTI 239
GNL+E R V +I+ T+
Sbjct: 550 LGNLLELRHVFARIVFDTV 568
>gi|449440506|ref|XP_004138025.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 31/259 (11%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITA 62
+LS + L+K+R+ ME+NY+LSYG+AE+S+ LL +Y LL+ILLP AAY + + +
Sbjct: 189 NLSCLVFTLNKARLQMEMNYLLSYGSAEASLRLLWKYGLLEILLPIQAAYFIRNGFRRSD 248
Query: 63 ENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GK 121
+ ML+ LF +LDKL++ +RP +LWV +L+ H AL P+ VV F +++ G
Sbjct: 249 KGSNMLLSLFSSLDKLLAPNRPCHSSLWVAVLALHVALSDQPRSPLVVAAFGLAVHNGGN 308
Query: 122 WKEGVKFAR--DRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT 174
E + A+ +RA + F E+ E L V+ V +L V+ ++ +T
Sbjct: 309 MMEAISIAKSINRAHN--------ANFCELLEPENLEVQALIDEVMDLTTFVKAALHKMT 360
Query: 175 --------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLG 220
+S VF+ + V +IF+ +V E KR I+Y+ L
Sbjct: 361 DEHFVSLALETYPQAPASDLVFIPLVVYLKVCKIFECVVEGAERGFVPKRGK-INYECLA 419
Query: 221 KGNLVETRFVLGKIILKTI 239
GNL+E R V +I+ T+
Sbjct: 420 LGNLLELRHVFARIVFDTV 438
>gi|293332685|ref|NP_001168693.1| hypothetical protein [Zea mays]
gi|223950275|gb|ACN29221.1| unknown [Zea mays]
gi|414587498|tpg|DAA38069.1| TPA: hypothetical protein ZEAMMB73_877949 [Zea mays]
Length = 535
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 25/259 (9%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK+RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 269 VRTLACSVARLDKARILMEMNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 328
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ LL+FH+AL P D +V FA Y G
Sbjct: 329 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISLLAFHEALARKPCDPLIVATFALAFYLG 388
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT- 174
+ A D K + +GF E + +D+ LA +V A ++ + ++T
Sbjct: 389 G---DMSLAVDIGKSINR--QHDTGFRELLEPKVWTDKHLAGEVQSFAALMKQALTEMTD 443
Query: 175 -------------KASSGYVFVSKKIERNVQQIFD-VLVNSIESYNSGKRSHIIDYDMLG 220
SS VF+ + V + + V E + KR +I+Y L
Sbjct: 444 EYHVANAMAKIPQAPSSDLVFIPLQAYLKVLKFIECVQYGKKERGHEPKRDGMINYHNLS 503
Query: 221 KGNLVETRFVLGKIILKTI 239
G E R + ++ T+
Sbjct: 504 NGTHAEIRNLFTLVVFDTL 522
>gi|414587499|tpg|DAA38070.1| TPA: hypothetical protein ZEAMMB73_877949 [Zea mays]
Length = 471
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 25/259 (9%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK+RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 205 VRTLACSVARLDKARILMEMNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 264
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ LL+FH+AL P D +V FA Y G
Sbjct: 265 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISLLAFHEALARKPCDPLIVATFALAFYLG 324
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT- 174
+ A D K + +GF E + +D+ LA +V A ++ + ++T
Sbjct: 325 G---DMSLAVDIGKSINR--QHDTGFRELLEPKVWTDKHLAGEVQSFAALMKQALTEMTD 379
Query: 175 -------------KASSGYVFVSKKIERNVQQIFD-VLVNSIESYNSGKRSHIIDYDMLG 220
SS VF+ + V + + V E + KR +I+Y L
Sbjct: 380 EYHVANAMAKIPQAPSSDLVFIPLQAYLKVLKFIECVQYGKKERGHEPKRDGMINYHNLS 439
Query: 221 KGNLVETRFVLGKIILKTI 239
G E R + ++ T+
Sbjct: 440 NGTHAEIRNLFTLVVFDTL 458
>gi|414587500|tpg|DAA38071.1| TPA: hypothetical protein ZEAMMB73_877949 [Zea mays]
Length = 329
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 25/259 (9%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK+RI+ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 63 VRTLACSVARLDKARILMEMNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 122
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ LL+FH+AL P D +V FA Y G
Sbjct: 123 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISLLAFHEALARKPCDPLIVATFALAFYLG 182
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT- 174
+ A D K + +GF E + +D+ LA +V A ++ + ++T
Sbjct: 183 G---DMSLAVDIGKSINR--QHDTGFRELLEPKVWTDKHLAGEVQSFAALMKQALTEMTD 237
Query: 175 -------------KASSGYVFVSKKIERNVQQIFD-VLVNSIESYNSGKRSHIIDYDMLG 220
SS VF+ + V + + V E + KR +I+Y L
Sbjct: 238 EYHVANAMAKIPQAPSSDLVFIPLQAYLKVLKFIECVQYGKKERGHEPKRDGMINYHNLS 297
Query: 221 KGNLVETRFVLGKIILKTI 239
G E R + ++ T+
Sbjct: 298 NGTHAEIRNLFTLVVFDTL 316
>gi|242075570|ref|XP_002447721.1| hypothetical protein SORBIDRAFT_06g014480 [Sorghum bicolor]
gi|241938904|gb|EES12049.1| hypothetical protein SORBIDRAFT_06g014480 [Sorghum bicolor]
Length = 542
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 39/266 (14%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK RI++E+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 276 VRTLAYSVARLDKGRILLEMNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKR 335
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
+ ML+ LF LD ++ +RP +LW+ LL+FH+AL P D VV FA Y G
Sbjct: 336 KDKGTNMLLVLFSKLDNFLAPNRPCHNSLWISLLAFHEALARKPCDPLVVATFALAFYLG 395
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT- 174
+ A D K + +GF E + +D+ LA +V A ++ + ++T
Sbjct: 396 G---DMSLAVDIGKSINR--QHDTGFRELLEPKVWTDKHLAGEVQSFAALMKRALTEMTD 450
Query: 175 -------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSG--------KRSHI 213
SS VF+ Q++ ++ SIES G KR +
Sbjct: 451 EYHVGNAMAKIPQAPSSDLVFIP-------LQVYLKVLKSIESVQYGKKERGYEPKRDGM 503
Query: 214 IDYDMLGKGNLVETRFVLGKIILKTI 239
I+Y L G+ E + ++ T+
Sbjct: 504 INYHNLSNGSHAEITNLFTLVVFDTL 529
>gi|326509581|dbj|BAJ87006.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 130/267 (48%), Gaps = 41/267 (15%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK R++ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 124 VRNLACSVARLDKGRLLMEVNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTLFKR 183
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLY-H 119
ML+ LF LD ++ +RP +LW+ +L+FH+ALV P+D VV FA +Y
Sbjct: 184 KDNGTNMLLVLFSKLDSFLAPNRPCHNSLWISILAFHEALVRKPRDPLVVATFALAVYLG 243
Query: 120 GKWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT 174
G V + ++ +GFSE + + L +V +LA+S++ + ++T
Sbjct: 244 GDLPLAVDIGQSINRQ------HDAGFSELLEPRVRGKKGLLAEVKDLAISMRQALTEMT 297
Query: 175 --------------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKR--------SH 212
SS VF+ +Q VL +E GK+
Sbjct: 298 DEYYVANAMAKIPQAPSSDLVFIP------LQAYLKVL-KLVERVQHGKKEIGYEPKSDG 350
Query: 213 IIDYDMLGKGNLVETRFVLGKIILKTI 239
IDY L G E R + ++ TI
Sbjct: 351 NIDYYNLANGTPAEVRNLFTLVVFDTI 377
>gi|326518838|dbj|BAJ92580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +L+ S+ RLDK R++ME+NYML+YG+AE+S+ LL R+ LL+ LLPF AAY K
Sbjct: 137 VRNLACSVARLDKGRLLMEVNYMLAYGSAEASLRLLWRFGLLEHLLPFQAAYFSSTLFKR 196
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHG 120
ML+ LF LD ++ +RP +LW+ +L+FH+ALV P+D VV FA +Y G
Sbjct: 197 KDNGTNMLLVLFSKLDSFLAPNRPCHNSLWISILAFHEALVRKPRDPLVVATFALAVYLG 256
Query: 121 KWKEGVKFARDRAKEPVKFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT 174
+ A D + + +GFSE + + L +V +LA+S++ + ++T
Sbjct: 257 G---DLPLAVDIGQSINR--QHDAGFSELLEPRVRGKKGLLAEVKDLAISMRQALTEMT 310
>gi|297816090|ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321766|gb|EFH52187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 610
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 121/213 (56%), Gaps = 16/213 (7%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +LS ++RL + RI+ME+NYML+YG+AE+S+ LL ++ +L+ILLP AAYL K
Sbjct: 259 LKNLSFLVQRLHRGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLVHTGFKR 318
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH- 119
+ +L+ LF NLDKL++ DRP +LW+ +L+ H+AL P+ VV F+ +++
Sbjct: 319 RDKRSNLLLSLFGNLDKLLAPDRPCHSSLWLTILALHKALADQPRYPSVVAAFSLAVHNG 378
Query: 120 GKWKEGVKFARDRAKEPVKFVPEISGFSEIESDEQLAVKVTELALSVQDCVNDLT----- 174
G E VK R K + E+ E++S + L +V + S+++ + +T
Sbjct: 379 GDVLEAVKITRKVTKPHNRSFFELLEPEELDS-QTLLDEVMDFDSSIKEALGQMTDGRFI 437
Query: 175 -KASSGY--------VFVSKKIERNVQQIFDVL 198
KA + Y VF+ ++ + ++IF+ +
Sbjct: 438 SKAMAAYPQAPYSDMVFIPLQLYLDARRIFECV 470
>gi|15229038|ref|NP_190452.1| polynucleotide adenylyltransferase domain and RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|7576221|emb|CAB87911.1| putative protein [Arabidopsis thaliana]
gi|332644940|gb|AEE78461.1| polynucleotide adenylyltransferase domain and RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 881
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 120/217 (55%), Gaps = 17/217 (7%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 60
+ +LS ++RL + RI++E+NYML+YG+AE+S+ LL ++ +L+ILLP AAYL + K
Sbjct: 260 LKNLSFLVQRLHRGRILLEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLVRTGFKR 319
Query: 61 TAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH- 119
+ +L+ LF NLDKL++ D+P +LW+ +L+ H+AL P+ VV F+ +++
Sbjct: 320 RDKRSNLLLSLFGNLDKLLAPDKPCHSSLWLTILALHKALADQPRYPSVVAAFSLAVHNG 379
Query: 120 GKWKEGVKFARDRAKEPVKFVPEISGFSEI----ESDEQ-LAVKVTELALSVQDCVNDLT 174
G E VK R K P F E+ E D Q L +V + S+++ + +T
Sbjct: 380 GDVLEAVKNTRKVTK------PHNRSFFELLEPEEMDSQTLLDEVMDFDSSIKEALGQMT 433
Query: 175 KASSGYVFVSKKIERNVQQIF-DVLVNSIESYNSGKR 210
F+SK + Q + D++ ++ Y +R
Sbjct: 434 DGR----FISKAMAAYPQAPYSDMVFIPLQLYLDARR 466
>gi|297744919|emb|CBI38416.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAG 58
+ SL+SS++ LDKSRIM+ELNYMLSYG+A+ S+CLL R+NLL ILLPFH + G
Sbjct: 204 IRSLASSVKSLDKSRIMLELNYMLSYGSAKPSLCLLWRFNLLDILLPFHVGSIPCSTG 261
>gi|307136008|gb|ADN33864.1| poly(A) polymerase [Cucumis melo subsp. melo]
Length = 439
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 10 RLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENPMMLM 69
R K+R+ ME+NY+LSYG+AE+S+ LL +Y LL+ILLP Q G I E+
Sbjct: 208 RQAKARLQMEMNYLLSYGSAEASLRLLWKYGLLEILLPI-------QIGLIHLES----- 255
Query: 70 RLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYH-GKWKEGVKF 128
FF V + + V +L+ H AL P+ VV F +++ G E +
Sbjct: 256 -HFFGFSPGVKRSQTV-LSYRVAVLALHVALSDQPRSPLVVATFGLAVHNGGNMMEAISI 313
Query: 129 AR--DRAKEPVKFVPEISGFSEIESDEQLAVK-----VTELALSVQDCVNDLT------- 174
A+ +RA + F E+ + + V+ V +L SV+ ++ +T
Sbjct: 314 AKSINRAHN--------ANFYELLEPQNMEVQALIDEVMDLTTSVKVALHKMTDEHFVSL 365
Query: 175 -------KASSGYVFVSKKIERNVQQIFDVLVNSIESYNSGKRSHIIDYDMLGKGNLVET 227
+S VF+ + V +IF+ +V E KR I+Y+ L GN+ E
Sbjct: 366 ALESYPQAPASDLVFIPLVVYLKVCKIFECVVEGAERGFVPKRGK-INYECLALGNVPEL 424
Query: 228 RFVLGKIILKTI 239
R V +I+ T+
Sbjct: 425 RHVFARIVFDTV 436
>gi|440577418|emb|CCI55441.1| PH01B031C15.24 [Phyllostachys edulis]
Length = 736
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 10 RLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENPMMLM 69
R +K+R+MME+ YMLS+GAAESS+ LLR+Y LL ILLPF AAYL Q +++ +MLM
Sbjct: 149 RNNKTRLMMEMKYMLSHGAAESSVRLLRKYGLLDILLPFQAAYLSDQIKGKSSDRDLMLM 208
>gi|168013056|ref|XP_001759217.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689530|gb|EDQ75901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 33/137 (24%)
Query: 1 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHA---------- 50
+ L SSI L+K+R+ +E+N M++YG++E S+ LL RY +L+ LLPF A
Sbjct: 278 IRQLKSSILTLNKTRLQLEVNTMMAYGSSERSVRLLWRYGVLEYLLPFQARQHFGLLARY 337
Query: 51 ---AYLDQQAGK-------ITAENPMMLMRLFF-------------NLDKLVSCDRPADY 87
L +QA + A++ +++ L F NLDK+ + +RP
Sbjct: 338 FSNTNLKRQARRSDILLIIFKAQSVCLVIYLVFFRSAFVAIQKLLANLDKVTAPNRPCHG 397
Query: 88 TLWVGLLSFHQALVSDP 104
LWV +L+FH ALV P
Sbjct: 398 GLWVAILAFHLALVERP 414
>gi|307104614|gb|EFN52867.1| hypothetical protein CHLNCDRAFT_58740 [Chlorella variabilis]
Length = 911
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 7 SIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAENPM 66
+I L + R+ MEL +L YGA+E S+ L+ R LL +LLP HA YL + P
Sbjct: 471 TIGLLPQGRLQMELGSLLGYGASERSLALMWRLGLLDMLLPQHALYLKRHRVPRAPRAPS 530
Query: 67 --------MLMRLFFNLDKLVSCDRPADYTLWVGLLS 95
+L L LD+ V +P D ++WV LL+
Sbjct: 531 SKRRHKRDLLFELAGELDRHVHPQKPVDPSVWVALLA 567
>gi|414871085|tpg|DAA49642.1| TPA: hypothetical protein ZEAMMB73_390853 [Zea mays]
Length = 373
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 3 SLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGK 59
+L+ + RLDK RI+ME+NYML+YG+ E+S+ LL R+ L+ LLPF D +G+
Sbjct: 317 TLACLVARLDKGRILMEMNYMLAYGSTEASLWLLWRFVHLEHLLPFQVTNTDYLSGR 373
>gi|413955383|gb|AFW88032.1| hypothetical protein ZEAMMB73_729308 [Zea mays]
Length = 274
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Query: 78 LVSCDRPADYTLWVGLLSFHQALVSDPQDAFVVWVFASVLYHGKWKEGVKFARDRAKEPV 137
LVSCD P + LL+FH+AL P D +V FA Y G + A D ++ +
Sbjct: 85 LVSCDLPKAKLSRISLLAFHEALARKPCDPLIVATFALAFYLGG---DMSLAVD-IRKSI 140
Query: 138 KFVPEISGFSE-----IESDEQLAVKVTELALSVQDCVNDLT--------------KASS 178
+I GF E + +D+ LA +V A ++ + +T SS
Sbjct: 141 NRQHDI-GFRELLEPKVWTDKHLAGEVQSFAALMKQALTKMTDEYHVANAMAKIHQAPSS 199
Query: 179 GYVFVSKKIERNVQQIFD-VLVNSIESYNSGKRSHIIDYDMLGKGNLVETRFVLGKIILK 237
VF+ + V + + V E + KR +I+Y L G E R + ++
Sbjct: 200 DLVFIPLQAYLKVLKFIECVQYGKKERGHEPKRDGMINYHSLSNGTHAEIRNLFTLVVFD 259
Query: 238 TI 239
T+
Sbjct: 260 TL 261
>gi|329114045|ref|ZP_08242809.1| Hypothetical protein APO_0819 [Acetobacter pomorum DM001]
gi|326696584|gb|EGE48261.1| Hypothetical protein APO_0819 [Acetobacter pomorum DM001]
Length = 695
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 316 EEVEEIHKAVKNCQLPD----KELKVRTTEKHKWIENSCHFDQELSINEELVQKEGSQQL 371
EEVEEI + + D +L +R K + N + D E+ + +V+ GS++L
Sbjct: 212 EEVEEIKAGLDSTPPEDVDGVSDLIIRGMPKFVYYSNYGNLDSEIYL-PHVVENLGSRKL 270
Query: 372 GEETQKAAKTCQSPEEEIKVNPEKILEKKDRHSLSTEGTNKKRDKQKRADDKKKNGLLLS 431
G + A+T ++ +++ PE+ILE ++ + T + + + A K++ +LL
Sbjct: 271 GSREEARARTLRTLFSFVRLKPEEILELGQEVEMTGKATTDEAEIARVATRKRERTILLH 330
Query: 432 S 432
S
Sbjct: 331 S 331
>gi|359435327|ref|ZP_09225542.1| poly(A) polymerase [Pseudoalteromonas sp. BSi20652]
gi|357918042|dbj|GAA61791.1| poly(A) polymerase [Pseudoalteromonas sp. BSi20652]
Length = 430
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 4 LSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKITAE 63
L+S ++ + +R+ E+ + G AE++ +LR+Y L + L P LD+ G +
Sbjct: 204 LASLLDNIPPARLFEEILKLFLNGKAEANFLMLRKYGLFRSLFPELDKILDKNPGGLEH- 262
Query: 64 NPMMLMRLFFNLDKLVSCDR---PA---DYTLWVGLL 94
++ ++F N DK ++ D+ PA LW LL
Sbjct: 263 --ALIQQMFQNTDKRINTDKKVTPAFIFAALLWFPLL 297
>gi|403331247|gb|EJY64561.1| Cast multi-domain protein [Oxytricha trifallax]
Length = 4572
Score = 38.1 bits (87), Expect = 8.6, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 271 KNRKRGLQPSSAELKLKTAKKCKWTEKFSSINHELSMNKEDVVPKEEVEEIHKAV---KN 327
K RK+ Q + ++L AK+ + T+ FS +M+K +EE++++ K + K
Sbjct: 3733 KRRKKKEQLAEVMIQLNVAKQ-EDTKHFSE-----NMDKIAEKEQEEIDKLEKEIDKEKQ 3786
Query: 328 CQLPDKELKVRTTEKHKWIENSCHFDQELSINEELVQKEGSQQLGEETQKAAKTCQSPEE 387
L D E +++++ + + +Q + E K G + G+ + K + EE
Sbjct: 3787 LGLKDIEQQLKSSRNERLADMEKKLEQMRKLREG-SSKNGGVEFGDMLNEYGKLVKKVEE 3845
Query: 388 EIKVNPEKIL---------EKKDRHSLSTEGTNKKRDKQKRADDKKKNGLLLSSL 433
E++ + +K + K+DR + + + K+R+++ D KN L ++
Sbjct: 3846 ELENSKQKQMNELDDKLKRRKQDRLK-AIQASKKEREEKFHQDQSSKNKTLTDNI 3899
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,498,988,926
Number of Sequences: 23463169
Number of extensions: 270758312
Number of successful extensions: 873825
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 3403
Number of HSP's that attempted gapping in prelim test: 845225
Number of HSP's gapped (non-prelim): 20285
length of query: 437
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 291
effective length of database: 8,933,572,693
effective search space: 2599669653663
effective search space used: 2599669653663
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)