BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013722
(437 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/440 (73%), Positives = 370/440 (84%), Gaps = 3/440 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDND C HATVI+VDS NRHGILL+V+Q L DLNL+ITKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ ++Y++ T+ET A FLNS+R SVGV+PSKE TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEVSAVLTDL C+VV+AEIWTHNARAAA++HV DQ++GCAIED KRL I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSAR--VLHGERRLHQMLFADRDFERLDCV-NYNSRPHV 237
KK L NV + N RTP M+ISS ++ +RRLHQM+FA RDFERL+ V + NSRPHV
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYVQDKNSRPHV 240
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
T+LDCSDRDYT VTIRS+DRPKLLFDTVC LTDMQYVV+HGTV+TGRMEAYQE+YI+HVD
Sbjct: 241 TVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVD 300
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G P+ SEAERQRV CLEAAIERRA EGL LEL T+DRFGLLSD+TR+ RE GLCI+RA
Sbjct: 301 GLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAV 360
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFF 417
I+T K KDTFFVTD SGN VD K V+ I+ QIG+TIL+VKGNLN PKLPQE RSF
Sbjct: 361 ITTKCGKAKDTFFVTDVSGNTVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPQEGTRSFP 420
Query: 418 FTNFFKGRSFQSFKLIKSCS 437
F N FKGRSFQ+FKLIKS S
Sbjct: 421 FGNLFKGRSFQTFKLIKSYS 440
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/440 (72%), Positives = 367/440 (83%), Gaps = 3/440 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDND C HATVI+VDS NRHGILL+V+Q L DLNL+ITKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ ++Y++ T+ET A FLNS+R SVGV+PSKE TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEVSAVLTDL C+VV+AEIWTHN RAAA++HV DQ++GCAIED KRL I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSAR--VLHGERRLHQMLFADRDFERLD-CVNYNSRPHV 237
KK L NV + N RTP M+ISS ++ +RRLHQM+FA RDFERL+ + NSRPHV
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYAQDTNSRPHV 240
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
T+LDCSDRDYT VTIRS+DRPKLLFDTVC LTDMQYVV+HGTV+TGRMEAYQE+YI+HVD
Sbjct: 241 TVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVD 300
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G P+ SEAERQRV CLEAAIERRA EGL LEL T+DRFGLLSD+TR+ RE GLCI+RA
Sbjct: 301 GLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAV 360
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFF 417
I+T K KDTFFVTD SGN VD K V+ I+ QIG+TIL+VKGNLN PKLP E RSF
Sbjct: 361 ITTKCGKAKDTFFVTDVSGNXVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPXEGTRSFX 420
Query: 418 FTNFFKGRSFQSFKLIKSCS 437
F N FKGRSFQ+FKLIKS S
Sbjct: 421 FGNLFKGRSFQTFKLIKSYS 440
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/441 (69%), Positives = 366/441 (82%), Gaps = 5/441 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDND E ATVIQVDSVN+HGILLEV+Q L D+NLVITKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF V D +G KI D+ I+YI T+E +ASF+ MR +VGV+PS+++TSIE
Sbjct: 61 SSDGGWFMDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L+GTDRPGLLSEV AVL DL C+VV+AEIWTHNARAAA++HV D S+GCAIED RL KI
Sbjct: 121 LSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV----NYNSRPH 236
K+LLCNVL+ N DL+T M++S H ERRLHQ++FADRD++R++ + +SRPH
Sbjct: 181 KELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGKDKSSRPH 240
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
VT+LDC ++DYT +T+RSKDRPKLLFDTVC LTDMQYVV+HG V TGRMEAYQEYYI+HV
Sbjct: 241 VTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIRHV 300
Query: 297 DGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356
DG P+SS+AER+RV+ CLEAAIERRASEGLELEL T+DRFGLLSDITR+ RE LCI+RA
Sbjct: 301 DGLPMSSDAERERVIECLEAAIERRASEGLELELRTEDRFGLLSDITRVFRENSLCIKRA 360
Query: 357 EISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSF 416
EIST G K KDTF+VTD +GNPV+P+I+DSI+ QIG +ILQVK N N PK PQE SF
Sbjct: 361 EISTEGGKAKDTFYVTDVTGNPVNPQIIDSIRQQIGHSILQVK-NSNLSPKAPQETTMSF 419
Query: 417 FFTNFFKGRSFQSFKLIKSCS 437
F N FK R+ Q+FKLI+S S
Sbjct: 420 LFGNIFKCRTLQNFKLIRSYS 440
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/442 (66%), Positives = 350/442 (79%), Gaps = 5/442 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDN+ CE+ATVIQVDSVN+HGILL+V+Q + D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF VTD NG KI D+ I YI+ +E N SF SMR SVGVVP++E+T IE
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSE+ AVL DL C+VV+AEIWTHN RAAA++HV D SSGCAIED RL I
Sbjct: 121 LTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR-----P 235
+ LLCNVLR + D +T ++S V + +RRLHQ++FADRD+ER++ R P
Sbjct: 181 RDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKGPFP 240
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
HVT+ DC++RDYT V +R+KDRPKLLFD VC LTDMQYVV+HG V T R AYQE+YI+H
Sbjct: 241 HVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRH 300
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
VDGFPISSEAER+R++ CLEAAIERRASEG+ELEL T+DR GLLSDITRI RE LCI+R
Sbjct: 301 VDGFPISSEAERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS 415
AEIST K KDTF+VTD +GNPVDPK +DSI+ QIG T+LQVK N + PK PQ
Sbjct: 361 AEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIG 420
Query: 416 FFFTNFFKGRSFQSFKLIKSCS 437
F F +FFK RSFQ+FKLI+S S
Sbjct: 421 FLFGSFFKARSFQNFKLIRSYS 442
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/444 (66%), Positives = 355/444 (79%), Gaps = 8/444 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDNDVCE ATVIQVDSVN+HGILL+V+Q L D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF V D +G KI D+ I YI+ +E+NASF S+R SVGV+PS+++TSIE
Sbjct: 61 SSDGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L+G DRPGLLSEV AVL DL C+VV+AEIWTHNARAAA++HV D S+GCA++D KRL I
Sbjct: 121 LSGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV------NYNSR 234
K+LLCNVL+ N DL+ M++S + ERRLHQ++FADRD+ER+D V + +SR
Sbjct: 181 KELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSR 240
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYI 293
PHVT+L+ ++DY+ +T+RSKDRPKLLFD VC LTDM+YVV+HG V GR EAYQE+YI
Sbjct: 241 PHVTVLNI-EKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYI 299
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+HVDG PISS+AER+RV+ CLEAAIERRASEGLELEL T+DR GLLSDITR RE LCI
Sbjct: 300 RHVDGLPISSDAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRTFRENSLCI 359
Query: 354 RRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
+RAEIST G KDTF+VTD +G+PVDPKIVDSI QIG+T LQVK NL PK QE
Sbjct: 360 KRAEISTKGGIAKDTFYVTDVTGSPVDPKIVDSICRQIGQTRLQVKQNLTLSPKPAQETT 419
Query: 414 RSFFFTNFFKGRSFQSFKLIKSCS 437
+ FK R+FQ+FKLI+S S
Sbjct: 420 MGYLLGTLFKARTFQNFKLIRSYS 443
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/447 (65%), Positives = 346/447 (77%), Gaps = 12/447 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+AKLIRRMN PRVVIDND CEHAT++QVD++NR+G LL+V+Q L DLNL+ITKAYISS
Sbjct: 6 DEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYISS 65
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVFYVT +G K+ D++ ++YIK +E + +NS+RSS+ ++PSKE+TSIEL+
Sbjct: 66 DGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIELS 125
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDRPGLLSEVSAVLTDL CSVV+AEIWTHN R AA++H+ +QS+GCA+E+ KRL IK+
Sbjct: 126 GTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIKE 185
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
LL NVL+ N R+P +SISS H RRLHQM+FA RDFERL+ P V + D
Sbjct: 186 LLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESAKEKGVEPCVIVSD 245
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
C+D+DYT VT+R DRPKLLFDTV LTDMQYVV+HGTV+TG EAYQEYYI+HVDG PI
Sbjct: 246 CADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVDGLPI 305
Query: 302 SSEAERQRVMACLEAAIERRASE-----------GLELELYTDDRFGLLSDITRILREYG 350
SSEAERQRV CLEAAIERRASE GLELEL TDDRFGLLSDITRI RE G
Sbjct: 306 SSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDITRIFRENG 365
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
L I+RAEIST K KDTFFVTD +GN VDP V I+ QIG+TIL KG LN K PQ
Sbjct: 366 LSIQRAEISTKNGKAKDTFFVTDVAGNSVDPTTVRMIREQIGQTILHAKGKLNVLSKFPQ 425
Query: 411 EPARSFFFTNFFKGRSFQSFKLIKSCS 437
E RSF F +FFKGRSF F L+KS S
Sbjct: 426 ETPRSFLFGSFFKGRSFHHFGLVKSYS 452
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/443 (66%), Positives = 356/443 (80%), Gaps = 10/443 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+AKLIRR+NPPRVVIDND CE ATVIQVDSVN+HGILL+V+Q L D+NLVITKAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF V D +G+KI D+ + YI+ +E+NASF S+R SVGV+PS+E+T+IE
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSEV AVLTDL C+VV+AEIWTHN RAAA++HV D S+GCAI+D KRL I
Sbjct: 121 LTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV------NYNSR 234
++LLCNVL+ N D +T + ++S V ERRLHQ++FADRD+ER++ + +SR
Sbjct: 181 RELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSR 240
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
PHVT+L+ +RDYT V++RSKDRPKLLFD VC LTDM+YVV+HG V TGRMEAYQE+YI+
Sbjct: 241 PHVTVLNI-ERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIR 299
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HVDG P+SS+AER+RV+ CLEAAIERRASEGLELEL T+DR GLLSDITRI RE LCI+
Sbjct: 300 HVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIK 359
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAEI T G K KDTF+VTD +GNPVDPKI+DSI QIG+T L VK N PK PQE
Sbjct: 360 RAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTM 419
Query: 415 SFFFTNFFKGRSFQSFKLIKSCS 437
+ F N FK R +FKLI+S S
Sbjct: 420 GYIFGNLFKAR---TFKLIRSYS 439
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/445 (65%), Positives = 349/445 (78%), Gaps = 8/445 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDN+ CE+ATVIQVDSVN+HGILL+V+Q + D+NLVITKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF V D G KI D+ I YI+ +E N SF+ S+R SVGVVP++E+T IE
Sbjct: 61 SSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSE+ AVLTDL C+VV+AEIWTHN RAAA++HV D SSGCAI+D RL I
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV--------NYN 232
+ LL NVLR + D +T ++S V + +RRLHQ++FADRD+ER++ +
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDRDKR 240
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
PHVT+ DC ++DYT VT+R++DRPKLLFD VC LTDMQYVV+HG V T RMEA+QE+Y
Sbjct: 241 PLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFY 300
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLC 352
I+HVDGFPISSEAER+R+M CLEAAIERRASEG+ LEL T+DR GLLSDITR RE LC
Sbjct: 301 IRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLC 360
Query: 353 IRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP 412
I+RAEIST K +DTF+VTD +GNPVDPKI+DSI+ QIG +L+VK N N PK PQ
Sbjct: 361 IKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPPQPT 420
Query: 413 ARSFFFTNFFKGRSFQSFKLIKSCS 437
F NFFK RSFQ+FKLIKS S
Sbjct: 421 TIGFLLGNFFKARSFQNFKLIKSYS 445
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 294/445 (66%), Positives = 356/445 (80%), Gaps = 12/445 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+AKLIRR+NPPRVVIDND CE ATVIQVDSVN+HGILL+V+Q L D+NLVITKAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTT--VETNASFLNSMRSSVGVVPSKEYTS 118
SSDG + MDVF V D +G+KI D+ + YI+ +E+NASF S+R SVGV+PS+E+T+
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTA 120
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IELTGTDRPGLLSEV AVLTDL C+VV+AEIWTHN RAAA++HV D S+GCAI+D KRL
Sbjct: 121 IELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLS 180
Query: 179 KIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV------NYN 232
I++LLCNVL+ N D +T + ++S V ERRLHQ++FADRD+ER++ + +
Sbjct: 181 TIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKS 240
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
SRPHVT+L+ +RDYT V++RSKDRPKLLFD VC LTDM+YVV+HG V TGRMEAYQE+Y
Sbjct: 241 SRPHVTVLNI-ERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFY 299
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLC 352
I+HVDG P+SS+AER+RV+ CLEAAIERRASEGLELEL T+DR GLLSDITRI RE LC
Sbjct: 300 IRHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLC 359
Query: 353 IRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP 412
I+RAEI T G K KDTF+VTD +GNPVDPKI+DSI QIG+T L VK N PK PQE
Sbjct: 360 IKRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQET 419
Query: 413 ARSFFFTNFFKGRSFQSFKLIKSCS 437
+ F N FK R +FKLI+S S
Sbjct: 420 TMGYIFGNLFKAR---TFKLIRSYS 441
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 288/445 (64%), Positives = 349/445 (78%), Gaps = 8/445 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDN+ CE+ATVIQVDSVN+HGILL+V+Q + D+NLVITKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSD + MDVF V D NG KI D+ I YI+ +E N SF S+R SVGVVP++E+T IE
Sbjct: 61 SSDAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSE+ AVLTDL C+VV+AEIWTHN RAAA++HV D SSGCAI+D RL I
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV--------NYN 232
+ LL NVLR + D +T ++S V + +RRLHQ++FADRD+ER++ +
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKR 240
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
PHVT++DC ++DYT VT+R++DRPKLLFD VC LTDMQYVV+HG V T R EA+QE+Y
Sbjct: 241 PLPHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFY 300
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLC 352
I+HVDGFPISSEAER+R++ CLEAAIERRASEG+ELEL T+DR GLLSDITRI RE LC
Sbjct: 301 IRHVDGFPISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLC 360
Query: 353 IRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP 412
I+RAEIST K +DTF+VTD +GNPVDPKI+DSI+ QIG +L+VK N N PK Q
Sbjct: 361 IKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPT 420
Query: 413 ARSFFFTNFFKGRSFQSFKLIKSCS 437
F NFFK RSFQ+FKLI+S S
Sbjct: 421 TIGFLLGNFFKARSFQNFKLIRSYS 445
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 295/475 (62%), Positives = 350/475 (73%), Gaps = 38/475 (8%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+AKLIRRMNPPRVVIDN+ CE+ATVIQVDSVN+HGILL+V+Q + D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTT--------------------------- 93
SSDG + MDVF VTD NG KI D+ I YI+
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDF 120
Query: 94 ------VETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
+E N SF SMR SVGVVP++E+T IELTGTDRPGLLSE+ AVL DL C+VV+A
Sbjct: 121 TVLYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTA 180
Query: 148 EIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVL 207
EIWTHN RAAA++HV D SSGCAIED RL I+ LLCNVLR + D +T ++S V
Sbjct: 181 EIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVT 240
Query: 208 HGERRLHQMLFADRDFERLDCVNYNSR-----PHVTILDCSDRDYTAVTIRSKDRPKLLF 262
+ +RRLHQ++FADRD+ER++ R PHVT+ DC++RDYT V +R+KDRPKLLF
Sbjct: 241 YRDRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLF 300
Query: 263 DTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRA 322
D VC LTDMQYVV+HG V T R AYQE+YI+HVDGFPISSEAER+R++ CLEAAIERRA
Sbjct: 301 DIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRA 360
Query: 323 SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
SEG+ELEL T+DR GLLSDITRI RE LCI+RAEIST K KDTF+VTD +GNPVDPK
Sbjct: 361 SEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPK 420
Query: 383 IVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
+DSI+ QIG T+LQVK N + PK PQ F F +FFK RSFQ+FKLI+S S
Sbjct: 421 SIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFKLIRSYS 475
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/434 (65%), Positives = 345/434 (79%), Gaps = 4/434 (0%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+AKL+RRMN PRVVI+ND CEHATVIQ+D+V R G LLEV+Q L DLNLVITKAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGT 124
G+ M+VF+VTD +G KI D+ ++ IK +ET+A + SM ++ SKE+T IELTGT
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGK---MLLSKEHTLIELTGT 127
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
DRPGLLSEV AVLTDLSC+VV+AE+W HNARAAA++H+ DQS+G AIED ++L IK+LL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELL 187
Query: 185 CNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN-YNSRPHVTILDCS 243
NVL+ GD RTP++SISS +H RRLHQM+FA RDFER V+ RP+VT+ DC
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVSVDDIRVRPYVTVSDCP 247
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
DR+YT VT RS DRPKLLFDTVC LTDMQY+V+HGTV+T EAYQEYYI+H DG P+SS
Sbjct: 248 DRNYTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGLPMSS 307
Query: 304 EAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR 363
EAERQRVM C++AAIERR SEGL+LEL+TDD FGLLSDITRILRE GLC +RA+IST
Sbjct: 308 EAERQRVMECIQAAIERRVSEGLQLELFTDDHFGLLSDITRILRENGLCPKRAKISTKNG 367
Query: 364 KVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFK 423
K + F VTD SGNPV+PK + I+ Q+G+T++QVKGNL+ PK PQE RSF F +FFK
Sbjct: 368 KARHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNLSMSPKFPQETPRSFLFGSFFK 427
Query: 424 GRSFQSFKLIKSCS 437
SFQ+ +LIKS S
Sbjct: 428 CPSFQNSRLIKSLS 441
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 343/442 (77%), Gaps = 7/442 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRR+NPPRVVIDN+ C+ ATVIQVDS+N+HGILL+V+Q L+D+NL+ITKAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF V G KI DQ I+ I+ +E ASF+ S+R SVGV+PS+++TSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L+GTDRPGLLSEV AVL DL C+VV+A++WTHN RAAA++HV D ++G AI D +RLL I
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-----LDCVNYNSRP 235
K+LLCNVLR NG+L+ M++S V +RRLHQ++ ADRD+ER L+ + N RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
HVT+ DC+++DYT +T R++DRPKLLFD +C LTDM+YVV+HG V TGRMEA+ E+YI+H
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRH 298
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
DG PISS+AER RV+ CLEAAIERR SEGL+LEL +DR GLLSDITRI RE LCIRR
Sbjct: 299 KDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRR 358
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS 415
AEI+T K KD F+VTD +G +D K+V+SI+ QIG +LQVK N P+E
Sbjct: 359 AEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEMTAG 418
Query: 416 FFFTNFFKGRSFQSFKLIKSCS 437
FF FFK R+FQ+FKLI+S S
Sbjct: 419 FFLGYFFKARTFQNFKLIRSYS 440
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/447 (60%), Positives = 344/447 (76%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRR+NPPRVVIDN+ C+ ATVIQVDS+N+HGILL+V+Q L+D+NL+ITKAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF V G KI DQ I+ I+ +E ASF+ S+R SVGV+PS+++TSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L+GTDRPGLLSEV AVL DL C+VV+A++WTHN RAAA++HV D ++G AI D +RLL I
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-----LDCVNYNSRP 235
K+LLCNVLR NG+L+ M++S V +RRLHQ++ ADRD+ER L+ + N RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-----AYQE 290
HVT+ DC+++DYT +T R++DRPKLLFD +C LTDM+YVV+HG V TGRME ++QE
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQE 298
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
+YI+H DG PISS+AER RV+ CLEAAIERR SEGL+LEL +DR GLLSDITRI RE
Sbjct: 299 FYIRHKDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENS 358
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
LCIRRAEI+T K KD F+VTD +G +D K+V+SI+ QIG +LQVK N P+
Sbjct: 359 LCIRRAEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPK 418
Query: 411 EPARSFFFTNFFKGRSFQSFKLIKSCS 437
E FF FFK R+FQ+FKLI+S S
Sbjct: 419 EMTAGFFLGYFFKARTFQNFKLIRSYS 445
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/427 (63%), Positives = 327/427 (76%), Gaps = 4/427 (0%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+AKL+RRMN PRVVI+NDVCEHATVIQVD+V R G LLEV+Q L DLNLVITKAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGT 124
G+ M+VF+VTD G KI D+ ++ I+ +ET+A + SM ++ SKE+T +ELTGT
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGK---MLLSKEHTLVELTGT 127
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
DRPGLLSEV AVLTDLSC+VV+AEIW HNARAAA++HV DQS+G AIED ++L IK+LL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELL 187
Query: 185 CNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILDCS 243
NVL+ GD RTP++SISS +H RRLHQM+FA RDFER + NS RP VT+ DC
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSEDDNSVRPSVTVSDCP 247
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
DRDYT VT S DRPKLLFDTVC LTDMQY+V+HGTV T EAYQEYYI+HVDG P+SS
Sbjct: 248 DRDYTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGLPVSS 307
Query: 304 EAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR 363
EAERQRVM C++AAIERRA+EGL LEL+TDD FGL+SDITRILRE GLC +RAEIST
Sbjct: 308 EAERQRVMECIQAAIERRATEGLHLELFTDDHFGLISDITRILRENGLCPKRAEISTKNG 367
Query: 364 KVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFK 423
K K F VTD SGNPV+PK + I+ Q+G+T++QVKGN ++ + F F+
Sbjct: 368 KAKHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNFKYVSEISPAETKKFPLWELFQ 427
Query: 424 GRSFQSF 430
F F
Sbjct: 428 MPRFPKF 434
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/427 (61%), Positives = 327/427 (76%), Gaps = 13/427 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KLIRRMNPPRVVIDN+ C++A+VI+VDS N+HGILLEV+Q L+DLNL+ITKAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G KI D+ + YI+ ++ ++A F++SMR SVGV+PS ++TSIE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEVSAVLT L CSVV+AE+WTHN RAAA++HV D+ +GCAI D +RL K+
Sbjct: 121 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 180
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVNYNSRPHVT 238
K+LLCN LR S+ V H ERRLHQM+FADRD+ER+ D + RP+V
Sbjct: 181 KQLLCN-------LRLWSLH----GVTHTERRLHQMMFADRDYERIYNDGSDEAQRPNVN 229
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ D+DY+ VTIRSKDRPKLLFDTVC LTDMQYVV+H V EAYQEYYI+H+DG
Sbjct: 230 VVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDG 289
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ S+AERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE+
Sbjct: 290 SPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEV 349
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T K +TF V DASG PVD K +DSI+ IG+TILQVKG+ ++PQE F
Sbjct: 350 TTRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLL 409
Query: 419 TNFFKGR 425
F+ R
Sbjct: 410 VGLFRSR 416
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/439 (59%), Positives = 331/439 (75%), Gaps = 4/439 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RR+NPPRVVIDN+ C++ATVI+VDS N+HGILLEV+Q L DLNL+ITKAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF V D +G KI D+A + YI+ ++ + F +SMRS VGV+PS ++TSIE
Sbjct: 67 SSDGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMRS-VGVIPSMDHTSIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSE+SAVLT L C+VVSAE+WTHN RAAA++ V D+ +G AI D +RL +I
Sbjct: 126 LTGSDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRI 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD--CVNYNSRPHVT 238
K+LLCNVL+ + R +S V H ERRLHQM+FADRD+ER D ++ RP+V+
Sbjct: 186 KELLCNVLKGSNKFRGAKTVVSHG-VTHTERRLHQMMFADRDYERADDEVLDEKQRPNVS 244
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ D+DY+ VTIRSKDRPKLLFDTVC LTDM+YVV+H + EAYQEYYI+H+DG
Sbjct: 245 VVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRHIDG 304
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ S+AER RV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE+
Sbjct: 305 SPVKSDAERMRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 364
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T K +TF+V DASG VD K ++SI+ IG+TIL+VK N + + QE F F
Sbjct: 365 TTRDGKAINTFYVRDASGYLVDGKTIESIRQVIGQTILKVKSNPDELKPVSQESPTRFLF 424
Query: 419 TNFFKGRSFQSFKLIKSCS 437
FK RSF +F L++S S
Sbjct: 425 GGLFKSRSFVNFGLVRSYS 443
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/437 (61%), Positives = 328/437 (75%), Gaps = 8/437 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKLIRRMNPPRVVIDN+ + ATVIQVDSVN+HG LLEV+Q L D+NLVI KAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-FLNSMRSSVGVVPSKEYTSIE 120
SDGG+ MDVF V D +G KI D + YI+ +E+NA F+ +RSSVGV+P+ EYT+IE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIE 122
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L GTDRPGLLSEVSAVLTDL C+VV+AEIWTHN RAAA++HV D + AI D RL I
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTI 182
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN-SRPHVTI 239
K+LLCNV+RTN R + ++ S H ERRLHQ++F DRD+E + + SRP VT+
Sbjct: 183 KELLCNVVRTNSGSRA-AKTVFSCSDTHRERRLHQIMFDDRDYEGVKRAKTSASRPSVTL 241
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++ ++DYT VT+RSKDRPKL+FD VC LTDMQYVV+HG V T +EAYQE+YI+HVDG
Sbjct: 242 MNI-EKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGL 300
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PI+SEAE++RV+ CLEAAIERRASEGLELEL +DR GLLSDITR RE L I RAEIS
Sbjct: 301 PINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEIS 360
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTP----PKLPQEPARS 415
T K KDTF+VTD +GNPV+ KIV+SI+ QIG + L+VK + + E
Sbjct: 361 TREGKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEDCSVLGTSRPSHETTMG 420
Query: 416 FFFTNFFKGRSFQSFKL 432
+ +N FK +S QSFKL
Sbjct: 421 YLLSNIFKPKSLQSFKL 437
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/399 (65%), Positives = 317/399 (79%), Gaps = 4/399 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DD +AKL+RR+N PRVV+DND CEHATVIQVD+V R G LLEV+Q L DLNLV+TKAY+S
Sbjct: 2 DDAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMS 61
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIEL 121
SDG + M+VFYVTD +G KI D+ ++ I+ +ET+A + +S+ ++PSKE+T IEL
Sbjct: 62 SDGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACMV---KSTGKMLPSKEHTLIEL 118
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
TGTDRPGLLSEV AVLTDL C+VV+AEIW HN RAAA++H+ DQS+G AIED ++L IK
Sbjct: 119 TGTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIK 178
Query: 182 KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTIL 240
+LL NVL+ +GD RTP +SISS +H RRLHQM+FA RDFER N NS RP+VT+
Sbjct: 179 ELLYNVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERPGSENDNSVRPYVTVF 238
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
DC DRDYT VT S DRPKL+FDTVC LTDMQY+V+HGTV+T +AYQEYYI+HVDGFP
Sbjct: 239 DCPDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHVDGFP 298
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
SSEAERQRV+ C++AAIERRASEGL LEL+TDD FGLLS ITRILRE GL + AEIST
Sbjct: 299 TSSEAERQRVIECIQAAIERRASEGLPLELFTDDHFGLLSYITRILRENGLWPKSAEIST 358
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
K K ++ VTD SGNPVDPK + I Q+G+T+LQVK
Sbjct: 359 RNGKAKHSYIVTDVSGNPVDPKTILLIHQQMGQTVLQVK 397
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/439 (58%), Positives = 330/439 (75%), Gaps = 4/439 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RR+NPPRVVIDN+ C++ATVI+VDS N+HGILLEV+Q L DLNL+ITKAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+A + YI ++ + F +SMRS VGV S ++T+IE
Sbjct: 67 SSDGGWFMDVFNVTDPDGNKVTDEAILDYITKSLGPESCFTSSMRS-VGVKQSMDHTAIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEVSAVLT L C+VV+AE+WTHN RAAA++ V D+ +G AI D ++L +I
Sbjct: 126 LTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRI 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVNYNSRPHVT 238
K+LLCNVL+ + R +S V H ERRLHQM+FADRD+ER D ++ RP+V+
Sbjct: 186 KELLCNVLKGSNKSRGAKTVVSHG-VTHTERRLHQMMFADRDYERANNDELDEKQRPNVS 244
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ ++DY+ VTI SKDRPKLLFDTVC LTDM+YVV+H + EA+QEYYIKH+DG
Sbjct: 245 VVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHIDG 304
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ SEAERQR++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE+
Sbjct: 305 SPVKSEAERQRIIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 364
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T K +TF+V+DASG PVD K +DSI+ IG+TIL+VK + + QE F F
Sbjct: 365 TTRAGKAVNTFYVSDASGYPVDAKTIDSIRQAIGQTILKVKSSPEEQKPVSQESPTRFLF 424
Query: 419 TNFFKGRSFQSFKLIKSCS 437
FK RSF +F L++S S
Sbjct: 425 GGLFKSRSFVNFGLVRSYS 443
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/439 (57%), Positives = 327/439 (74%), Gaps = 4/439 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDE+ KL RR+NPPRVVIDN+ C++ATVI+VDS N+HG LLEV+Q L DLNL+ITKAY+
Sbjct: 7 LDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYV 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+A + YI ++ T + F +SM S GV S ++T+IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSM-GSFGVKQSIDHTAIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEVSAVL L C+V++AE+WTHN RAAA++ V D +G AI D ++L ++
Sbjct: 126 LTGSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRV 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVNYNSRPHVT 238
K+LLCNVL+ + R +S V H ERRLHQM+FADRD+ER D ++ RP+V+
Sbjct: 186 KELLCNVLKGSNKYRGARTVVSHG-VTHTERRLHQMMFADRDYERANNDVLDEKQRPNVS 244
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ ++DY+ +TIRSKDRPKLLFDTVC LTDM+YVV+H + EA+QEYYIKHVDG
Sbjct: 245 VVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHVDG 304
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ SEAERQR++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE+
Sbjct: 305 SPVKSEAERQRIIQCLEAAIERRVSEGLKLELCTKDRIGLLSDVTRIFRENSLTVTRAEV 364
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T K +TF+V+DASG PVD K +DSI+ G+TIL+VKG+ + QE F F
Sbjct: 365 TTRAGKAVNTFYVSDASGYPVDAKTIDSIRQATGQTILKVKGSPEELKPVSQESPTRFLF 424
Query: 419 TNFFKGRSFQSFKLIKSCS 437
FK RSF +F L+KS S
Sbjct: 425 GGLFKSRSFVNFGLVKSYS 443
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/441 (58%), Positives = 330/441 (74%), Gaps = 7/441 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN+ C++ATVI+VDS N+HGILLEV+Q L DLNL+ITKAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VT +G K+ D+A + YI+ ++ + + MRS VGV + ++T+IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTMDHTAIE 130
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L GTDRPGLLSEVSAVLT+L C++++AE+WTHN RAAA++HV D+ +G AI D +RL I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSII 190
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL---DCVNYNSRPHV 237
K+LLCNVL G+ + + ++ + H ERRLHQM+FADRD+ER+ D RP+V
Sbjct: 191 KELLCNVL-GGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFAEKQRPNV 249
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
+++ SD+DY+ VTI+ KDRPKLLFDTVC LTDMQYVV+H + EAYQEYYIKH+D
Sbjct: 250 NVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHID 309
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G P+ S+AERQRV+ CL AAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE
Sbjct: 310 GSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAE 369
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE-PARSF 416
++T G K +TF+V ASG PVD K ++SI+ IG TIL+VKG+ +PQ+ P RS
Sbjct: 370 VATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRS- 428
Query: 417 FFTNFFKGRSFQSFKLIKSCS 437
F+ FK RSF +F L+KS S
Sbjct: 429 LFSGLFKSRSFVNFGLVKSYS 449
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/441 (58%), Positives = 330/441 (74%), Gaps = 7/441 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN+ C++ATVI+VDS N+HGILLEV+Q L DLNL+ITKAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VT +G K+ D+A + YI+ ++ + + MRS VGV + ++ +IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTTDHIAIE 130
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L GTDRPGLLSEVSAVLT+L C++V+AE+WTHN RAAA++HV D+ SG AI D +RL I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSII 190
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL---DCVNYNSRPHV 237
K+LLCNVL G+ + + ++ + H ERRLHQM+FADRD+ER+ D + RP+V
Sbjct: 191 KELLCNVL-GGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFDEKQRPNV 249
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
+++ SD+DY+ VTI+ KDRPKLLFDTVC LTDMQYVV+H + EAYQEYYIKH+D
Sbjct: 250 NVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHID 309
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G P+ S+AERQRV+ CL AAI+RR SEGL+LEL T DR GLLSD+TRI RE L + RAE
Sbjct: 310 GSPVKSDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAE 369
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE-PARSF 416
++T G K +TF+V ASG PVD K ++SI+ IG TIL+VKG+ +PQ+ P RS
Sbjct: 370 VATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRS- 428
Query: 417 FFTNFFKGRSFQSFKLIKSCS 437
F+ FK RSF +F L+KS S
Sbjct: 429 LFSGLFKSRSFVNFGLVKSYS 449
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/441 (59%), Positives = 326/441 (73%), Gaps = 9/441 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDE+ KLIRRMNPPRVVIDND C+ ATVI+VDS N+HGILLEV+Q L DLNL++TKAYI
Sbjct: 7 IDDEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
S DG + MDVF VTD +G K+ D+ + YIK ++E+++ F +SMRS VGV PS +YT IE
Sbjct: 67 SCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRS-VGVKPSVDYTVIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G DR GLLSEVSAVLT L C+VV AE+WTHN RAAA++HV D +G AI D +RL +I
Sbjct: 126 LIGNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRI 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD--CVNYNSRPHVT 238
K LL NVLR + + ++ S V H ERRLHQM+FADRD+E LD + +P+V
Sbjct: 186 KGLLSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDVMEDQQKPNVK 245
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ D DY+ VTIRSKDRPKLLFDTVC LTDMQYVV+H VV EAYQEYYI+H+DG
Sbjct: 246 VVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDG 305
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ S+AERQRV+ CLEAAI RR SEGL+LEL T DR GLLSD+TRI RE L + RAE+
Sbjct: 306 SPVKSDAERQRVIHCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 365
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ----EPAR 414
+T K +TF+V D SG PVD K +DSI+ IG+TIL+VKG+ ++P + Q P R
Sbjct: 366 TTKAGKAINTFYVRDPSGYPVDSKTIDSIRELIGQTILKVKGS-SSPKEQKQASQDSPTR 424
Query: 415 SFFFTNFFKGRSFQSFKLIKS 435
F F F+ RSF +F LI+S
Sbjct: 425 -FLFGGLFRSRSFVNFGLIRS 444
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + + P V I + + +D T + + S ++ +L + V LTD+ +V
Sbjct: 6 DIDDEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAY 65
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEA----AIERRASEGLE-------L 328
+ + + DG ++ E + LE+ A R S G++ +
Sbjct: 66 ISCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMR-SVGVKPSVDYTVI 124
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
EL +DR GLLS+++ +L + AE+ T + VTD
Sbjct: 125 ELIGNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTD 169
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 309/393 (78%), Gaps = 4/393 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKLIRRMNPPRVVIDN+ + ATVIQVDSVN+HG LLEV+Q L D+NLVI KAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-FLNSMRSSVGVVPSKEYTSIE 120
SDGG+ MDVF V D +G KI D + YI+ +E+NA F+ +RSSVGV+P+ EYTSIE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIE 122
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L GTDRPGLLSEVSAVLTDL C+VV+AEIWTHN RAAA++HV D S+ AI D RL I
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTI 182
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN-SRPHVTI 239
K+LLCNV+RTN R + ++ S H ERRLHQ++F DRD+E + + SRP VT+
Sbjct: 183 KELLCNVVRTNSGSRA-AKTVFSCSDTHRERRLHQIMFDDRDYEGVKRARTSASRPSVTL 241
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++ ++DYT VT+RSKDRPKL+FD VC LTDMQYVV+HG V T +EAYQE+YI+HVDG
Sbjct: 242 MNI-EKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGL 300
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PI+SEAE++RV+ CLEAAIERRASEGLELEL +DR GLLSDITR RE L I RAEIS
Sbjct: 301 PINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEIS 360
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
T K KDTF+VTD +GNPV+ KIV+SI+ QIG
Sbjct: 361 TREGKAKDTFYVTDVTGNPVESKIVESIRQQIG 393
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/440 (57%), Positives = 330/440 (75%), Gaps = 8/440 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN ++ATVI+VDS N+ GILLEV+Q L DLNL+ITKAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + F +MRS VGV + ++T+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRS-VGVKQTPDHTAIE 135
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G+DRPGLLSEVSAVLT+L C++V+AE+WTHN RAAA++HV D+ +G AI D +RL I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS--RPHVT 238
K+LLCNVL G+ + + ++ + H +RRLHQM+F DRD+ER+D +++ RP+V
Sbjct: 196 KELLCNVL-GGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVD 254
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ SD+DY+ VTI +DRPKL+FDTVC LTDMQYVV+H + +AYQEYYIKH+DG
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDG 314
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+ S+AERQRV+ CLEAAIERR SEGL+LEL T DR GLLS++TRI RE L + RAE+
Sbjct: 315 SPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 374
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE-PARSFF 417
+T G K +TF+V ASG VD K ++SI+ IG TIL+VKG +P LPQ+ P RS
Sbjct: 375 TTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKG---SPESLPQDSPTRSSI 431
Query: 418 FTNFFKGRSFQSFKLIKSCS 437
F+ FK RSF +F L+KS S
Sbjct: 432 FSGLFKSRSFVNFGLVKSYS 451
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/444 (57%), Positives = 324/444 (72%), Gaps = 24/444 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN+ C++ATVI+VDS N+HGILLEV+Q L DLNL+ITKAYI
Sbjct: 7 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP---SKEYT 117
SSDGG+ MDVF VT +G K+ D+A + YI+ VGV P + ++T
Sbjct: 67 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIR---------------KVGVSPFGQTMDHT 111
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+IEL GTDRPGLLSEVSAVLT+L C++++AE+WTHN RAAA++HV D+ +G AI D +RL
Sbjct: 112 AIELMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRL 171
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL---DCVNYNSR 234
IK+LLCNVL G+ + + ++ + H ERRLHQM+FADRD+ER+ D R
Sbjct: 172 SIIKELLCNVL-GGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFAEKQR 230
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+V +++ SD+DY+ VTI+ KDRPKLLFDTVC LTDMQYVV+H + EAYQEYYIK
Sbjct: 231 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 290
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ S+AERQRV+ CL AAIERR SEGL+LEL T DR GLLSD+TRI RE L +
Sbjct: 291 HIDGSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVT 350
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE-PA 413
RAE++T G K +TF+V ASG PVD K ++SI+ IG TIL+VKG+ +PQ+ P
Sbjct: 351 RAEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPT 410
Query: 414 RSFFFTNFFKGRSFQSFKLIKSCS 437
RS F+ FK RSF +F L+KS S
Sbjct: 411 RS-LFSGLFKSRSFVNFGLVKSYS 433
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/447 (57%), Positives = 322/447 (72%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F SMRS VGV+PS + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE+SAVLT L CSV++AE+WTHN RAAA++ V D S+GC I D +RL +I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RL-----DCVNYNSR 234
K LL NVL+ + R +S V H +RRLHQM+F DRD+E RL + R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVSHGEV-HTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EAYQEYY++
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ SEAE+QRV+ CLEAAI+RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTSDRVGLLSNVTRIFRENSLTVT 368
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P+
Sbjct: 369 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 428
Query: 415 S----FFFTNFFKGRSFQSFKLIKSCS 437
F F FK +SF +F L++S S
Sbjct: 429 ESPTRFLFGGLFKSKSFVNFGLVRSYS 455
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/447 (56%), Positives = 326/447 (72%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDE+ KLIRRMNPPRVVIDND C++ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 7 VDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F +SMR+ VGV+PS + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMRT-VGVIPSTDSTVIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE++AVLT L CSV++AE+WTHN RAAA++ V D S+GCAI D +RL +I
Sbjct: 126 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS------R 234
K LL NVL+ + R +S V H +RRLHQM+F DRD+E + +S R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVSQGEV-HTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQR 244
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EAYQEYY++
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ SEAE+QRV+ CLEAAI+RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 364
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P++
Sbjct: 365 RAEVKTKGGKALNTFYVSDASGYSIDAKTLDSIRQTIGQTILKVKNNPEEQQQRQKSPSQ 424
Query: 415 S----FFFTNFFKGRSFQSFKLIKSCS 437
F F FK +SF +F L++S S
Sbjct: 425 ESPTRFLFGGLFKSKSFVNFGLVRSYS 451
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/448 (56%), Positives = 323/448 (72%), Gaps = 13/448 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KLIRRMNPPRVVIDND C++ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F MR+ +GV PS + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMRT-IGVTPSTDSTVIE 119
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE++AVLT L CSV++AE+WTHN RAAA++ V D S+GCAI D +RL +I
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS------- 233
K LL NVL+ + R +S V H +RRLHQM+F DRD+E V+ +S
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLSHGEV-HTDRRLHQMMFEDRDYEHRAVVDDDSSIQDERQ 238
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
RP V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EAYQEYY+
Sbjct: 239 RPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYV 298
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+H+DG P+ SEAE+QRV+ CLEAAI RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 299 RHIDGSPVKSEAEKQRVIQCLEAAINRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTV 358
Query: 354 RRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P+
Sbjct: 359 TRAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPEEQQQRQKPPS 418
Query: 414 RS----FFFTNFFKGRSFQSFKLIKSCS 437
+ F F FK +SF +F L++S S
Sbjct: 419 QDSPTRFLFGGLFKSKSFVNFGLVRSYS 446
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/447 (57%), Positives = 321/447 (71%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 1 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F SMRS VGV+PS + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 119
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE+SAVLT L CSV++AEIWTHN RAAA++ V D +GC I D +RL +I
Sbjct: 120 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 179
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RL-----DCVNYNSR 234
K LL NVL+ + R +S V H +RRLHQM+F DRD+E RL + R
Sbjct: 180 KNLLRNVLKGSNTPREAKTVVSHGEV-HTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 238
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EA+QEYY++
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ SEAE+QRV+ CLEAAI+RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 358
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P+
Sbjct: 359 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 418
Query: 415 S----FFFTNFFKGRSFQSFKLIKSCS 437
F F FK +SF +F L++S S
Sbjct: 419 ESPTRFLFGGLFKSKSFVNFGLVRSYS 445
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/447 (57%), Positives = 321/447 (71%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F SMRS VGV+PS + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 125
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE+SAVLT L CSV++AEIWTHN RAAA++ V D +GC I D +RL +I
Sbjct: 126 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 185
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RL-----DCVNYNSR 234
K LL NVL+ + R +S V H +RRLHQM+F DRD+E RL + R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVSHGEV-HTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 244
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EA+QEYY++
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ SEAE+QRV+ CLEAAI+RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 364
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P+
Sbjct: 365 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 424
Query: 415 S----FFFTNFFKGRSFQSFKLIKSCS 437
F F FK +SF +F L++S S
Sbjct: 425 ESPTRFLFGGLFKSKSFVNFGLVRSYS 451
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/447 (57%), Positives = 321/447 (71%), Gaps = 12/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A F SMRS VGV+PS + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE+SAVLT L CSV++AEIWTHN RAAA++ V D +GC I D +RL +I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RL-----DCVNYNSR 234
K LL NVL+ + R +S V H +RRLHQM+F DRD+E RL + R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVSHGEV-HTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EA+QEYY++
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+DG P+ SEAE+QRV+ CLEAAI+RR SEGL+LEL T DR GLLS++TRI RE L +
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 368
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ T G K +TF+V+DASG +D K +DSI+ IG+TIL+VK N + + P+
Sbjct: 369 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 428
Query: 415 S----FFFTNFFKGRSFQSFKLIKSCS 437
F F FK +SF +F L++S S
Sbjct: 429 ESPTRFLFGGLFKSKSFVNFGLVRSYS 455
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 325/441 (73%), Gaps = 8/441 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I++MNPPRVVIDN C++ATV+ VDS N++GILLEV+Q L +L L++ KAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGYLMDVFYVTDINGQKIGDQAT----ISYIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VTD NGQKI D++ + YI + ++ FL S R SVGV PS +YT
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT+L C+VV+AE+WTHN RAAA++ V D+ +G AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 195
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRP 235
+IK+ L V + + + +++ + H ERRLHQ++ DRD+ER D N N P
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTMG-ITHTERRLHQLMLEDRDYERYDKDRTNVNPTP 254
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V++++ D+DY+ V IR KDRPKLLFDTVC LTDMQYVV+HG+V + EAYQEYYI+H
Sbjct: 255 VVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRH 314
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
+DG P++SEAERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + R
Sbjct: 315 IDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTR 374
Query: 356 AEISTMGRKVKDTFFVTDASG-NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
AE+ST G K +TF+V DA+G + VD K +++I+ +IG+T+LQVKG+ + PQE
Sbjct: 375 AEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS 434
Query: 415 SFFFTNFFKGRSFQSFKLIKS 435
F F++ F+ RS S LI+S
Sbjct: 435 RFLFSSLFRPRSLYSLGLIRS 455
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P V I + S ++ T V + S ++ +L + V LT++Q +V
Sbjct: 14 DSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAY 73
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVM----ACLEA----AIERRASEGLE---- 327
+ + + + +G I E+ ++ CL A RR S G+E
Sbjct: 74 ISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T ++ V D
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 182
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 325/441 (73%), Gaps = 8/441 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I++MNPPRVVIDN C++ATV+ VDS N++GILLEV+Q L +L L++ KAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGYLMDVFYVTDINGQKIGDQAT----ISYIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VTD NGQKI D++ + YI + ++ FL S R SVGV PS +YT
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT+L C+VV+AE+WTHN RAAA++ V D+ +G AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQRL 195
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRP 235
+IK+ L V + + + +++ + H ERRLHQ++ DRD+ER D N N P
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTMG-ITHTERRLHQLMLEDRDYERYDKDRTNVNPTP 254
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V++++ D+DY+ V IR KDRPKLLFDTVC LTDMQYVV+HG+V + EAYQEYYI+H
Sbjct: 255 VVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRH 314
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
+DG P++SEAERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + R
Sbjct: 315 IDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTR 374
Query: 356 AEISTMGRKVKDTFFVTDASG-NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
AE+ST G K +TF+V DA+G + VD K +++I+ +IG+T+LQVKG+ + PQE
Sbjct: 375 AEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS 434
Query: 415 SFFFTNFFKGRSFQSFKLIKS 435
F F++ F+ RS S LI+S
Sbjct: 435 RFLFSSLFRPRSLYSLGLIRS 455
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P V I + S ++ T V + S ++ +L + V LT++Q +V
Sbjct: 14 DSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAY 73
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVM----ACLEA----AIERRASEGLE---- 327
+ + + + +G I E+ ++ CL A RR S G+E
Sbjct: 74 ISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T ++ V D
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 182
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 325/441 (73%), Gaps = 8/441 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I++MNPPRVVIDN C++ATV+ VDS N++GILLEV+Q L +L L++ KAYIS
Sbjct: 13 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 72
Query: 62 SDGGYLMDVFYVTDINGQKIGDQAT----ISYIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VTD NGQKI D++ + YI + ++ FL S R SVGV PS +YT
Sbjct: 73 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 132
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT+L C+VV+AE+WTHN RAAA++ V D+ +G AI D +RL
Sbjct: 133 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 192
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRP 235
+IK+ L V + + + +++ + H ERRLHQ++ DRD+ER D N N P
Sbjct: 193 ARIKERLSYVFKGSNRSQDTKTTVTMG-ITHTERRLHQLMLEDRDYERYDKDRTNVNPTP 251
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V++++ D+DY+ V IR KDRPKLLFDTVC LTDMQYVV+HG+V + EAYQEYYI+H
Sbjct: 252 VVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRH 311
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
+DG P++SEAERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + R
Sbjct: 312 IDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTR 371
Query: 356 AEISTMGRKVKDTFFVTDASG-NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
AE+ST G K +TF+V DA+G + VD K +++I+ +IG+T+LQVKG+ + PQE
Sbjct: 372 AEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS 431
Query: 415 SFFFTNFFKGRSFQSFKLIKS 435
F F++ F+ RS S LI+S
Sbjct: 432 RFLFSSLFRPRSLYSLGLIRS 452
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P V I + S ++ T V + S ++ +L + V LT++Q +V
Sbjct: 11 DSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAY 70
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVM----ACLEA----AIERRASEGLE---- 327
+ + + + +G I E+ ++ CL A RR S G+E
Sbjct: 71 ISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSD 130
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T ++ V D
Sbjct: 131 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 179
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/422 (60%), Positives = 309/422 (73%), Gaps = 33/422 (7%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKLIRRMNPPRVVIDN+ + ATVIQVDSVN+HG LLEV+Q L D+NLVI KAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTT---------------------------- 93
SDGG+ MDVF V D +G KI D + YI+
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQ 122
Query: 94 -VETNAS-FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
+E+NA F+ +RSSVGV+P+ EYTSIEL GTDRPGLLSEVSAVLTDL C+VV+AEIWT
Sbjct: 123 RIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWT 182
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGER 211
HN RAAA++HV D S+ AI D RL IK+LLCNV+RTN R + ++ S H ER
Sbjct: 183 HNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRA-AKTVFSCSDTHRER 241
Query: 212 RLHQMLFADRDFERLDCVNYN-SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTD 270
RLHQ++F DRD+E + + SRP VT+++ ++DYT VT+RSKDRPKL+FD VC LTD
Sbjct: 242 RLHQIMFDDRDYEGVKRARTSASRPSVTLMNI-EKDYTVVTMRSKDRPKLVFDVVCTLTD 300
Query: 271 MQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELEL 330
MQYVV+HG V T +EAYQE+YI+HVDG PI+SEAE++RV+ CLEAAIERRASEGLELEL
Sbjct: 301 MQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASEGLELEL 360
Query: 331 YTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQ 390
+DR GLLSDITR RE L I RAEIST K KDTF+VTD +GNPV+ KIV+SI+ Q
Sbjct: 361 SAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVTDVTGNPVESKIVESIRQQ 420
Query: 391 IG 392
IG
Sbjct: 421 IG 422
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/440 (55%), Positives = 320/440 (72%), Gaps = 15/440 (3%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
MN PRVVIDN VC +AT+++VDS N+HGILLE +Q L DL L I KA +SSDG + MDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 72 YVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGV-VPSKEYTSIELTGTDRPGLL 130
YVTD NG+K+ D+ I YI+ T+ETN L S SVGV V + ++T+IELTGTDRPGLL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRT 190
SE+ AVL+DL C+VV AE+WTHN R A L++V D+ +G I+D +++ KI++LL NV+R
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 NGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV----------NYNSRPHVTIL 240
N ++R + +++S + H ERRLHQ++FADRD+E+LD N N++PHVT+
Sbjct: 181 NSNIRG-AKTVASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVE 239
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+C +R Y+ V ++ KDRPKLLFD VC LTDM+YVV+H T+ + + +QEYYI+H DG P
Sbjct: 240 NCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHTDGCP 299
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
++SEAERQRV+ CLEAAI RRASEG+ LEL T+DR GLLSD+TRI RE G+ + RAE+ST
Sbjct: 300 VNSEAERQRVIQCLEAAIRRRASEGVRLELCTNDRVGLLSDVTRIFRENGMSVTRAEVST 359
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTN 420
G K + F+VTDA+GNPVDPK V++++ +IG TILQVK N +EPA F F N
Sbjct: 360 RGDKAVNVFYVTDAAGNPVDPKTVEAVRREIGLTILQVKDNCMDTKSPRREPAIPFSFGN 419
Query: 421 FFKGRS---FQSFKLIKSCS 437
FK +S S LIKS S
Sbjct: 420 LFKSKSERFLYSLGLIKSYS 439
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/430 (55%), Positives = 314/430 (73%), Gaps = 9/430 (2%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
MNPPRV IDN C +ATVI VDS N++G+LLEV+Q L DL L++ KAYISSDGG+ MDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 YVTDINGQKIGDQATISYIK----TTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRP 127
VT+ G KI D++ + IK ++ ++ L S R ++GV PS +YT IELTGTDRP
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRP 120
Query: 128 GLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNV 187
GLLSEVSAVLT+L C+VV+AE+WTHN RAAA++ V D+ SG AI D +RL +IK+ LCNV
Sbjct: 121 GLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERLCNV 180
Query: 188 LRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP--HVTILDCSDR 245
+ G R +++ + H ERRLHQM+ DRD++R D + P V++++ +
Sbjct: 181 FK--GRSRDAKTTVAMG-ITHTERRLHQMMLEDRDYDRHDKDRASGSPTSMVSVVNWLQK 237
Query: 246 DYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEA 305
DY+ VTIR KDRPKLLFDTVC LTDMQYVV+HG+V T +AYQ+YYI+H+DG P++SEA
Sbjct: 238 DYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSPVNSEA 297
Query: 306 ERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKV 365
ER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + RAE+ST G K
Sbjct: 298 ERKRIIHCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTKGDKA 357
Query: 366 KDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGR 425
+TF+V DA+G+ V+ K +++I+ +IG+T+LQVKG+ + P L QE F F++ F+ R
Sbjct: 358 INTFYVRDAAGSSVELKTLEAIRQEIGQTVLQVKGHPDQPKSLTQESPTRFLFSSLFRPR 417
Query: 426 SFQSFKLIKS 435
S + LI S
Sbjct: 418 SLCNLGLIGS 427
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 314/440 (71%), Gaps = 16/440 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I+ MNPPRV IDN C +ATVI VDS N++GILLEV+Q L DL L++ KAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VT+ +G KI D++ + YI ++ ++ FL S R +VGV PS ++T
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHT 135
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT L C+VVSAE+WTHN RAAA++ V D+ SG A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-------LDCVN 230
+IK L NV R G R ++++ H ERRLHQM+F DRD+ER
Sbjct: 196 GRIKGRLYNVFR--GRSRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
N P V++++ + Y+ VT+R +DRPKLLFDTVC LTDMQYVV+HG+V T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
YYI+H+DG P++SEAER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE G
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 373
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN--TPPKL 408
L + RAE+ST G + +TF+V DA+G+ V+ + +++I+ +IG+T+LQVKG+ PP
Sbjct: 374 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVA 433
Query: 409 PQE-PARSFFFTNFFKGRSF 427
Q+ P R F + F+ RS
Sbjct: 434 AQDSPTRFLFSSLLFRPRSL 453
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P VTI + S + T + + S ++ +L + V LTD++ +V
Sbjct: 14 DSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAY 73
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI--------ERRASEGLE---- 327
+ + + + + G I+ E+ Q + + +I RR + G+E
Sbjct: 74 ISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSD 133
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T + VTD
Sbjct: 134 HTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 182
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 314/440 (71%), Gaps = 16/440 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I+ MNPPRV IDN C +ATVI VDS N++GILLEV+Q L DL L++ KAYIS
Sbjct: 17 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 76
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VT+ +G KI D++ + YI ++ ++ FL S R +VGV PS ++T
Sbjct: 77 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 136
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT L C+VVSAE+WTHN RAAA++ V D+ SG A+ D +R+
Sbjct: 137 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 196
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-------LDCVN 230
+IK L NV R G R ++++ H ERRLHQM+F DRD+ER
Sbjct: 197 GRIKGRLYNVFR--GRSRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 254
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
N P V++++ + Y+ VT+R +DRPKLLFDTVC LTDMQYVV+HG+V T EAYQ+
Sbjct: 255 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 314
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
YYI+H+DG P++SEAER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE G
Sbjct: 315 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 374
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN--TPPKL 408
L + RAE+ST G + +TF+V DA+G+ V+ + +++I+ +IG+T+LQVKG+ PP
Sbjct: 375 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVA 434
Query: 409 PQE-PARSFFFTNFFKGRSF 427
Q+ P R F + F+ RS
Sbjct: 435 AQDSPTRFLFSSLLFRPRSL 454
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P VTI + S + T + + S ++ +L + V LTD++ +V
Sbjct: 15 DSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAY 74
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI--------ERRASEGLE---- 327
+ + + + + G I+ E+ Q + + +I RR + G+E
Sbjct: 75 ISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSD 134
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T + VTD
Sbjct: 135 HTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 183
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 314/440 (71%), Gaps = 16/440 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I+ MNPPRV IDN C +ATVI VDS N++GILLEV+Q L DL L++ KAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VT+ +G KI D++ + YI ++ ++ FL S R +VGV PS ++T
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 135
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT L C+VVSAE+WTHN RAAA++ V D+ SG A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-------LDCVN 230
+IK L NV R G R ++++ H ERRLHQM+F DRD+ER
Sbjct: 196 GRIKGRLYNVFR--GRSRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
N P V++++ + Y+ VT+R +DRPKLLFDTVC LTDMQYVV+HG+V T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
YYI+H+DG P++SEAER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE G
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 373
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN--TPPKL 408
L + RAE+ST G + +TF+V DA+G+ V+ + +++I+ +IG+T+LQVKG+ PP
Sbjct: 374 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVA 433
Query: 409 PQE-PARSFFFTNFFKGRSF 427
Q+ P R F + F+ RS
Sbjct: 434 AQDSPTRFLFSSLLFRPRSL 453
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
D D E + + P VTI + S + T + + S ++ +L + V LTD++ +V
Sbjct: 14 DSDDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAY 73
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI--------ERRASEGLE---- 327
+ + + + + G I+ E+ Q + + +I RR + G+E
Sbjct: 74 ISSDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSD 133
Query: 328 ---LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L + AE+ T + VTD
Sbjct: 134 HTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 182
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/440 (55%), Positives = 314/440 (71%), Gaps = 14/440 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+AKL+R MNPPRVVIDND + ATVI+VDSVN HG LL V+Q + DLNLVI KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF VTD +G K+ D TISYI+ T+E + +R++VG+VPS++YTSIELT
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD--QSSGCAIEDQKRLLKI 180
GTDRPGLLSEV AVL + C+V SAE+WTHN R AA++ V D +++G AIED R+ I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTIL 240
+ L N+LR +R + ++A + H ERRLHQM+F DRD+ + R V++
Sbjct: 188 SRRLDNLLRGQNGVR----AAAAASLTHKERRLHQMMFEDRDYGAAGPP--DPRTEVSVT 241
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYIKHVDGF 299
C++R YT V +R +DRPKLLFDTVC +TDMQYVV+HGTV + AYQEYYI+HVDG
Sbjct: 242 HCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQEYYIRHVDGH 301
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
P+S+EAER+RV+ CLEAA+ERR ++GLELE+ TDDR GLLSD+TRI RE GL IRRAEIS
Sbjct: 302 PVSTEAERRRVVQCLEAAVERRTADGLELEVRTDDRAGLLSDVTRIFRENGLTIRRAEIS 361
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGN-LNTPPKLPQEPAR---S 415
+ + DTF+++D G+PV+ K +++I+ QIG L+VK N L E A +
Sbjct: 362 SEDGEAVDTFYLSDPQGHPVEAKTIEAIRAQIGEATLRVKNNPLADDGGSTSEVAAGSTA 421
Query: 416 FFFTNFFK-GRSFQSFKLIK 434
F F N FK R FQ+F LIK
Sbjct: 422 FLFGNLFKFYRPFQNFGLIK 441
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/448 (55%), Positives = 314/448 (70%), Gaps = 15/448 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE AK IRR+NPPRVVIDN+VC+ TVI+VDS N+HGILLEV+Q L +LNL I KAYI
Sbjct: 1 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 60
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS--FLNSMRSSVGVVPSKEYTS 118
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + S F SMRS++GV S +YT
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 120
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
+ELTGTDRPGLLSE+ AVL DL C+VV+AEIWTH A+AAA+L V D+ + AI D +RL
Sbjct: 121 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 180
Query: 179 KIKKLLCNVLRTNGD----LRTPSMSISSA-RVLHGERRLHQMLFADRDFER----LDCV 229
KI+KLL VL T G R P ++SSA H +R+LHQ++FADRD++ +D
Sbjct: 181 KIRKLLGYVL-TGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 239
Query: 230 NYNSR--PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA 287
+ R P V + + D DY+ V I+ KDRPKLLFDTV LTDM YVV H ++ +A
Sbjct: 240 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 299
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILR 347
YQEYYI+H DG P+ SEAERQRV+ CL+AAI+RR SEGL+LEL T DR GLLSD+TRI R
Sbjct: 300 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 359
Query: 348 EYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPK 407
E L + RAE+ T G K +TF+V DASG VD K ++SI+ IG+TILQVKG
Sbjct: 360 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKP 419
Query: 408 LPQEPARSFFFTNFFKGRSFQSFKLIKS 435
PQ+ F F FK RSF +F LI+S
Sbjct: 420 SPQDSPTGFLF-GVFKSRSFVNFGLIRS 446
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/448 (56%), Positives = 313/448 (69%), Gaps = 15/448 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE AK IRR+NPPRVVIDN+VC+ TVI+VDS N+HGILLEV+Q L +LNL I KAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS--FLNSMRSSVGVVPSKEYTS 118
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + S F SMRS++GV S +YT
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IELTGTDRPGLLSE+ AVL DL C+VV+AEIWTH A+AAA+L V D+ + AI D +RL
Sbjct: 131 IELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 KIKKLLCNVLRTNGD----LRTPSMSISSA-RVLHGERRLHQMLFADRDFER----LDCV 229
KI+KLL VL T G R P +SSA H +R+LHQ++FADRD++ +D
Sbjct: 191 KIRKLLGYVL-TGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 230 NYNSR--PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA 287
+ R P V + + D DY+ V I+ KDRPKLLFDTV LTDM YVV H ++ EA
Sbjct: 250 DKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEA 309
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILR 347
YQEYYI+H DG P+ SEAERQRV+ CL+AAI+RR SEGL+LEL T DR GLLSD+TRI R
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 348 EYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPK 407
E L + RAE+ T G K +TF+V DASG VD K ++SI+ IG+TILQVKG
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQVIGQTILQVKGGNTDAKT 429
Query: 408 LPQEPARSFFFTNFFKGRSFQSFKLIKS 435
PQ+ F F FK RSF +F LI+S
Sbjct: 430 SPQDSPTGFLF-GVFKSRSFVNFGLIRS 456
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/448 (55%), Positives = 314/448 (70%), Gaps = 15/448 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE AK IRR+NPPRVVIDN+VC+ TVI+VDS N+HGILLEV+Q L +LNL I KAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS--FLNSMRSSVGVVPSKEYTS 118
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + S F SMRS++GV S +YT
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
+ELTGTDRPGLLSE+ AVL DL C+VV+AEIWTH A+AAA+L V D+ + AI D +RL
Sbjct: 131 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 KIKKLLCNVLRTNGD----LRTPSMSISSA-RVLHGERRLHQMLFADRDFER----LDCV 229
KI+KLL VL T G R P ++SSA H +R+LHQ++FADRD++ +D
Sbjct: 191 KIRKLLGYVL-TGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 230 NYNSR--PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA 287
+ R P V + + D DY+ V I+ KDRPKLLFDTV LTDM YVV H ++ +A
Sbjct: 250 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 309
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILR 347
YQEYYI+H DG P+ SEAERQRV+ CL+AAI+RR SEGL+LEL T DR GLLSD+TRI R
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 348 EYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPK 407
E L + RAE+ T G K +TF+V DASG VD K ++SI+ IG+TILQVKG
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKP 429
Query: 408 LPQEPARSFFFTNFFKGRSFQSFKLIKS 435
PQ+ F F FK RSF +F LI+S
Sbjct: 430 SPQDSPTGFLF-GVFKSRSFVNFGLIRS 456
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 310/441 (70%), Gaps = 8/441 (1%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMNPPRV IDN AT+I+VDS NRHG LLEV+Q L DLNL+I +AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG+K+ D I+ ++ A S+R SVGV + E+T+IEL+
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLLSEV AVLTDL C+VV+AE+WTHN+R A+++++ D +SG I+D L KIK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE--RLDCV-NYNSRPHVTI 239
LL VL+ + D + + ++S H ERRLHQM++ADRDF+ C +Y SRP VT+
Sbjct: 191 LLLYVLKGDRDKHSANTAVS-MNSTHKERRLHQMMYADRDFDLNYTSCSESYQSRPLVTV 249
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
+C ++ YT V +R DRPKLLFDTVC LTDMQYVVYH T++ EAYQEY+I+HVDG
Sbjct: 250 ENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVDGS 309
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAERQRV+ CLEAAI RR +EG++LEL ++DR GLL+D+TRI RE GL + RAE++
Sbjct: 310 PISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAEVT 369
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFT 419
T G + + F+VTDASGN V + + +++ IG TIL VK + K P + F
Sbjct: 370 TRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDD-EQQSKCPPQEGSGFSLG 428
Query: 420 NFFKGRS---FQSFKLIKSCS 437
N F+ RS + LIKSCS
Sbjct: 429 NLFRSRSEKVLYNLGLIKSCS 449
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/439 (52%), Positives = 308/439 (70%), Gaps = 8/439 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ IR+MNPP +V+DND C AT+++VDS N +GILLEVIQ L+DLNLVI+KAYI+
Sbjct: 14 DDEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF +TD G+K+ D+AT++ YI+ ++ ++ +L + R SV V S +
Sbjct: 74 SDGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN 133
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVL +L C+VVSAEIWTHN RAAA++ V DQ +G A+ D +RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERL 193
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSA-RVLHGERRLHQMLFADRDFERLD--CVNYNSR 234
+IK+ L +LR R +M++SS H ERRLHQM+ D D E+L N + R
Sbjct: 194 ERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQRHASNQSQR 253
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+VT+ + +D+DY+ VTIR KDRPKLLFDTVC LTD+ YVV+H + +AYQE+Y++
Sbjct: 254 PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEFYVR 313
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G P+++EAER RV+ CLEAAIERR EG++LEL T+D+ GLLS++TRI RE L +
Sbjct: 314 HVNGSPMNTEAERLRVVQCLEAAIERRVWEGMKLELCTNDKVGLLSEVTRIFRENSLTVT 373
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ST GR +TF+V ++G VD K +DSI+ +IG I QVKG +E
Sbjct: 374 RAEVSTRGRTAVNTFYVCGSAGEAVDQKTIDSIRQEIGHNI-QVKGQPEPSEPQKKESPT 432
Query: 415 SFFFTNFFKGRSFQSFKLI 433
F F N F+ RS S +
Sbjct: 433 WFLFANLFRPRSLYSLGMF 451
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 309/441 (70%), Gaps = 8/441 (1%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMNPPRV IDN AT+I+VDS NRHG LLEV+Q L DLNL+I +AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDV +VTD NG+K+ D I+ ++ A S+R SVGV + E+T+IEL+
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLLSEV AVLTDL C+VV+AE+WTHN+R A+++++ D +SG I+D L KIK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE--RLDCV-NYNSRPHVTI 239
LL VL+ + D + + ++S H ERRLHQM++ADRDF+ C +Y SRP VT+
Sbjct: 191 LLLYVLKGDRDKHSANTAVS-MNSTHKERRLHQMMYADRDFDLNYTSCSESYQSRPLVTV 249
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
+C ++ YT V +R DRPKLLFDTVC LTDMQYVVYH T++ EAYQEY+I+HVDG
Sbjct: 250 ENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVDGS 309
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAERQRV+ CLEAAI RR +EG++LEL ++DR GLL+D+TRI RE GL + RAE++
Sbjct: 310 PISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAEVT 369
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFT 419
T G + + F+VTDASGN V + + +++ IG TIL VK + K P + F
Sbjct: 370 TRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDD-EQQSKCPPQEGSGFSLG 428
Query: 420 NFFKGRS---FQSFKLIKSCS 437
N F+ RS + LIKSCS
Sbjct: 429 NLFRSRSEKVLYNLGLIKSCS 449
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/438 (52%), Positives = 308/438 (70%), Gaps = 8/438 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ IR+MNPPR+ IDND C AT+++VDS N +GILLEVIQ L+DLNLVI+KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG++MDVF +TD GQK+ D+ATI+ YI ++ ++ ++ S R SV V S ++
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVL L C+VVSAEIWTHN RAAA++ V D+ +G A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARV-LHGERRLHQMLFADRDFERLD--CVNYNSR 234
+I+ L +LR R +M++S+ H ERRLHQM+ D D E+L N + R
Sbjct: 194 ERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHRHPPNQSQR 253
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+VT+ + +D+DY+ VTIR KDRPKLLFDTVC LTD+ YVV+H + +AYQE+Y++
Sbjct: 254 PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVR 313
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G P+ +EA+R RV+ CLEAAIERR SEG++LEL T+D+ GLLS++TRI RE L +
Sbjct: 314 HVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVT 373
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ST GR +TF+V D++G VD K +DSI+ IG+ I QVKG +E
Sbjct: 374 RAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQNI-QVKGQPEPSEPQKKESPT 432
Query: 415 SFFFTNFFKGRSFQSFKL 432
F F N F+ RS SF +
Sbjct: 433 WFLFANLFRPRSLYSFGM 450
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/444 (52%), Positives = 311/444 (70%), Gaps = 10/444 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDEF KL+ RMNPPRV +DN AT+I+VDS N+ G LLEV+Q L DL+L+I +AYI
Sbjct: 10 MDDEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD +G K+ + I+ ++ A S+R SVGV + E T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV AVL DL C+VV+AE+WTHN+R A+++++ D+ +G I + RL KI
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLTKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD----CVNYNSRPH 236
K+LL VL+ + D R+ + ++S H ERRLHQM++ADRD++ D + +P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVSVGST-HKERRLHQMMYADRDYDIDDGEGGSTSERRKPL 248
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
VT+ +C+D+ YT V +R DRPKLLFDTVC LTDMQYVVYH T++ EAYQEYYI+H+
Sbjct: 249 VTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIRHM 308
Query: 297 DGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356
DG PISSEAERQRV+ CLEAAI RR EG+ LEL ++DR GLLS++TRI RE GL + RA
Sbjct: 309 DGSPISSEAERQRVINCLEAAIRRRNPEGIRLELCSEDRIGLLSEVTRIFRENGLSVTRA 368
Query: 357 EISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSF 416
E++T + + F+VTDASG PV + +++++ +IG TIL+VK + N+PP PQE F
Sbjct: 369 EVTTRDSQAVNAFYVTDASGYPVKSETIEAVRKEIGLTILRVKDDSNSPP--PQEERGRF 426
Query: 417 FFTNFFKGRS---FQSFKLIKSCS 437
N F+ RS + LIKS S
Sbjct: 427 SLGNIFRSRSEKFLYNLGLIKSYS 450
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/438 (52%), Positives = 308/438 (70%), Gaps = 8/438 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ IR+MNPPR+ IDND C AT+++VDS N +GILLEVIQ L+DLNLVI+KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG++MDVF +TD GQK+ D+ATI+ YI ++ ++ ++ S R SV V S ++
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVL L C+VVSAEIWTHN RAAA++ V D+ +G A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARV-LHGERRLHQMLFADRDFERLD--CVNYNSR 234
+I+ L +LR R +M++S+ H ERRLHQM+ D D E+L N + R
Sbjct: 194 ERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHRHPPNQSQR 253
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+VT+ + +D+DY+ VTIR KDRPKLLFDTVC LTD+ YVV+H + +AYQE+Y++
Sbjct: 254 PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVR 313
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G P+ +EA+R RV+ CLEAAIERR SEG++LEL T+D+ GLLS++TRI RE L +
Sbjct: 314 HVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVT 373
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE+ST GR +TF+V D++G VD K +DSI+ IG+ I QVKG +E
Sbjct: 374 RAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQNI-QVKGQPEPSEPQKKESPT 432
Query: 415 SFFFTNFFKGRSFQSFKL 432
F F N F+ RS SF +
Sbjct: 433 WFLFANLFRPRSLYSFGM 450
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/424 (55%), Positives = 300/424 (70%), Gaps = 12/424 (2%)
Query: 24 CEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGD 83
C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYISSDGG+ MDVF VTD +G K+ D
Sbjct: 4 CKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTD 63
Query: 84 QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCS 143
+ + YI+ ++ A F SMRS VGV+PS + T IELTG DRPGLLSE+SAVLT L CS
Sbjct: 64 EVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLKCS 122
Query: 144 VVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
V++AEIWTHN RAAA++ V D +GC I D +RL +IK LL NVL+ + R +S
Sbjct: 123 VLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVVSH 182
Query: 204 ARVLHGERRLHQMLFADRDFE-RL-----DCVNYNSRPHVTILDCSDRDYTAVTIRSKDR 257
V H +RRLHQM+F DRD+E RL + RP V + + D+DY+ VT+R KDR
Sbjct: 183 GEV-HTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDR 241
Query: 258 PKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAA 317
PKLLFDTVC LTDMQYVV+HG+V T EA+QEYY++H+DG P+ SEAE+QRV+ CLEAA
Sbjct: 242 PKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLEAA 301
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
I+RR SEGL+LEL T DR GLLS++TRI RE L + RAE+ T G K +TF+V+DASG
Sbjct: 302 IKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDASGY 361
Query: 378 PVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS----FFFTNFFKGRSFQSFKLI 433
+D K +DSI+ IG+TIL+VK N + + P+ F F FK +SF +F L+
Sbjct: 362 SIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFLFGGLFKSKSFVNFGLV 421
Query: 434 KSCS 437
+S S
Sbjct: 422 RSYS 425
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V +DN + + +V+ V +R +L + + L D+ V+ + ++G +YV
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVS 134
I+G + +A + +E R S G+ +EL TDR GLLS V+
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEAAI----KRRVSEGL-------KLELCTTDRVGLLSNVT 327
Query: 135 AVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
+ + S +V AE+ T +A +V D +SG +I D K + I++ +
Sbjct: 328 RIFRENSLTVTRAEVKTKGGKALNTFYVSD-ASGYSI-DAKTIDSIRQTI 375
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/430 (54%), Positives = 307/430 (71%), Gaps = 16/430 (3%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
MNPPRV IDN C +ATVI VDS N++GILLEV+Q L DL L++ KAYISSDGG+ MDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 YVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRP 127
VT+ +G KI D++ + YI ++ ++ FL S R +VGV PS ++T IELTGTDRP
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRP 120
Query: 128 GLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNV 187
GLLSEVSAVLT L C+VVSAE+WTHN RAAA++ V D+ SG A+ D +R+ +IK L NV
Sbjct: 121 GLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNV 180
Query: 188 LRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER-------LDCVNYNSRPHVTIL 240
R G R ++++ H ERRLHQM+F DRD+ER N P V+++
Sbjct: 181 FR--GRSRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVV 238
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+ + Y+ VT+R +DRPKLLFDTVC LTDMQYVV+HG+V T EAYQ+YYI+H+DG P
Sbjct: 239 NWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCP 298
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
++SEAER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + RAE+ST
Sbjct: 299 VNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 358
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN--TPPKLPQE-PARSFF 417
G + +TF+V DA+G+ V+ + +++I+ +IG+T+LQVKG+ PP Q+ P R F
Sbjct: 359 RGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVAAQDSPTRFLF 418
Query: 418 FTNFFKGRSF 427
+ F+ RS
Sbjct: 419 SSLLFRPRSL 428
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 8/440 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ IR+MNPPR+VIDN+ AT+++VDS N +GILLEVIQ ++DLNLVI+KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYIT 74
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VTD G+KI D+AT++ YI+ ++ ++ ++ S R SV V + ++
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVL L C+VVSAEIWTHNARAAA++ V D+ + A+ D +RL
Sbjct: 135 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERL 194
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVL-HGERRLHQMLFADRDFERLDCV--NYNSR 234
+I++ L +LR R +M++SS H ERRLHQM+ D D+E+L + + R
Sbjct: 195 ERIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLAPGQSQR 254
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+VT+ + +D+DY+ VTIR KDRPKLLFDTVC LTD+QYVV+H + +AYQE+Y++
Sbjct: 255 PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 314
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G P+++E ER RV+ CLEAAIERR SEG++LEL T+D+ GLLS++TRI RE L +
Sbjct: 315 HVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVT 374
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAE++T GR +TF+V ++G VD K +DSI+ IG + LQVKG +E
Sbjct: 375 RAEVTTRGRMAVNTFYVRGSTGEDVDQKAIDSIRQAIGHS-LQVKGQPEPQEAQKKESPT 433
Query: 415 SFFFTNFFKGRSFQSFKLIK 434
F F N F+ RS SF ++
Sbjct: 434 WFLFANLFRPRSLYSFGFMR 453
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 308/439 (70%), Gaps = 8/439 (1%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ IR+MNPPR+VIDN+ AT+++VDS N +GILLEVIQ ++DLNLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYIT 74
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYT 117
SDGG+ MDVF VTD G+KI D+AT++ YI+ ++ ++ ++ S R SV V + ++
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IELTGTDRPGLLSEVSAVLT L C+VVSAEIWTHN RAAA++ V D+ +G A+ D +RL
Sbjct: 135 IIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERL 194
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD--CVNYNSRP 235
+I++ L + R G+L + S H ERRLHQM+ D D+E+L + RP
Sbjct: 195 ERIREKLSYLFR-GGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQRP 253
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
+VT+ + +D+DY+ VTIR KDR KLLFDTVC LTD+QYVV+H + +AYQE+Y++H
Sbjct: 254 NVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRH 313
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
V+G P+++E ER RV+ CLEAAIERR SEG++LEL T+D+ GLLS++TRI RE L + R
Sbjct: 314 VNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTR 373
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS 415
AE++T GR +TF+V ++G VD K +DSI+ IG + LQVKG P +E
Sbjct: 374 AEVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPPEPQKKESPTW 432
Query: 416 FFFTNFFKGRSFQSFKLIK 434
F F N F+ RS SF ++
Sbjct: 433 FLFANLFRPRSLYSFGFMR 451
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/444 (53%), Positives = 316/444 (71%), Gaps = 9/444 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF KL+ RMNPPRV +DND AT+I+VDS N+ G LLEV+Q L DLNL+I +AYI
Sbjct: 10 LDDEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD G K+ + I+ ++ S+R SVGV ++E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV AVL DL C+VV+AE+WTHN+R A+++++ D+++G I+D RL KI
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLGKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD--CVNYNSR--PH 236
K+LL VL+ + D R+ + ++S H ERRLHQM++ADRD+++ D C + + R P
Sbjct: 190 KQLLLFVLKGDRDKRSANTAVSVGST-HKERRLHQMMYADRDYDQDDLDCGSTSERRKPL 248
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
VT+ C+D+ YT V +RS DRPKLLFDTVC LTDMQYVVYH TV+ EA QEYYI+H+
Sbjct: 249 VTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIRHM 308
Query: 297 DGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356
DG PISSEAERQRV+ CLEAAI RR SEG+ LEL +DDR GLLSD+TRI RE GL + RA
Sbjct: 309 DGSPISSEAERQRVIHCLEAAIRRRTSEGIRLELCSDDRAGLLSDVTRIFRENGLSVTRA 368
Query: 357 EISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSF 416
E++T G + + F+VTDASGNPV +++++++ +IG T+L VK + K P + F
Sbjct: 369 EVTTRGTQAVNVFYVTDASGNPVKSEMIEAVRKEIGLTVLCVKDD-EFCMKSPSPESSRF 427
Query: 417 FFTNFFKGRS---FQSFKLIKSCS 437
N F+ RS + LIKSCS
Sbjct: 428 SLGNLFRSRSEKFLYNLGLIKSCS 451
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/428 (53%), Positives = 308/428 (71%), Gaps = 6/428 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF KL+ RMNPPRV +DN AT+I+VDS NR G LLEV+Q L D++L+I +AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD G K+ + I+ ++ A S+R SVGV + E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV AVL DL C+VV+AE+WTHN+R A+++++ D +G I+D RL+KI
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRPHVT 238
K+LL VL+ + D R+ + ++S + +RRLHQM++ADRD++ +D N S+P VT
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVSVGST-NTQRRLHQMMYADRDYD-MDSGSTNDRSKPLVT 247
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ + +D+ YT V +R DRPKLLFDTVC LTDMQYVV+H TV+ EAYQEYYI+HVDG
Sbjct: 248 VENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRHVDG 307
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
PISSEAE+QRV+ CLEAAI RR SEG+ LEL ++DR GLLSD+TRI RE GL + RAE+
Sbjct: 308 CPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEV 367
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T G + + F+VTD+SGNPV + +++++ +IG TIL+VK + + PQE R F
Sbjct: 368 TTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDAYSKSP-PQESGR-FSL 425
Query: 419 TNFFKGRS 426
N F+ RS
Sbjct: 426 GNLFRSRS 433
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/428 (53%), Positives = 308/428 (71%), Gaps = 6/428 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF KL+ RMNPPRV +DN AT+I+VDS NR G LLEV+Q L D++L+I +AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD G K+ + I+ ++ A S+R SVGV + E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV AVL DL C+VV+AE+WTHN+R A+++++ D +G I+D RL+KI
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRPHVT 238
K+LL VL+ + D R+ + ++S + +RRLHQM++ADRD++ +D N S+P VT
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVSVGST-NTQRRLHQMMYADRDYD-MDSGSTNDRSKPLVT 247
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ + +D+ YT V +R DRPKLLFDTVC LTDMQYVV+H TV+ EAYQEYYI+HVDG
Sbjct: 248 VENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRHVDG 307
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
PISSEAE+QRV+ CLEAAI RR SEG+ LEL ++DR GLLSD+TRI RE GL + RAE+
Sbjct: 308 CPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEV 367
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T G + + F+VTD+SGNPV + +++++ +IG TIL+VK + + PQE R F
Sbjct: 368 TTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDAYSKSP-PQESGR-FSL 425
Query: 419 TNFFKGRS 426
N F+ RS
Sbjct: 426 GNLFRSRS 433
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/454 (52%), Positives = 309/454 (68%), Gaps = 22/454 (4%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKL+R MNPPRVV+DN+ C+ ATVI+VDSV+ HG LL V+Q + DL LVI KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIEL 121
SDG + MDVF VTD +G K+ D TISYI+TT+E + + +R++VG+VP++EYT IEL
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ-SSGCAIEDQKRLLKI 180
TGTDRPGLLSEV AVL + C+V SAE+WTHN R AA++HV D SG AIED+ R+ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS------- 233
L N+LR +R + + + H ERRLHQM+F DRD++ +S
Sbjct: 195 STRLGNLLRGQSGVRAAAAAAPGG-LTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPT 253
Query: 234 -RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEAYQEY 291
V++ C++R YTAV +R +DRPKLLFDTVC +TDM YV++HG V + R AYQEY
Sbjct: 254 PATEVSVTPCAERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEY 313
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
YI+HVDG P+ SEAERQRV+ CLEAAIERR ++GL LE+ T DR GLLSD+TRI RE GL
Sbjct: 314 YIRHVDGDPVRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGL 373
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGN---------- 401
IRRAEIS+ + DTF+++D G+PV+ K +D+I+ QIG L+VK N
Sbjct: 374 TIRRAEISSERGEAVDTFYLSDPQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGG 433
Query: 402 LNTPPKLPQEPARSFFFTNFFK-GRSFQSFKLIK 434
+ +F F N FK R FQ+F LIK
Sbjct: 434 GGGGATDDVAGSTAFLFGNLFKFYRPFQNFSLIK 467
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 301/440 (68%), Gaps = 11/440 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+AKL+RRMNPPRVVIDN+ + ATVI+VDSVN HG LL V+Q + DLNLVI KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MD F VTD +G K+ D +TISYI+ T+E + + ++VG+VPS +YTSIELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDRPGLLSEV AVL + +V SAE+WTHN R AA++HV D +G AIED R+ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV---NYNSRPHVTI 239
L N+LR + D+R + S A LH ERRLHQM+F DR E + + R V++
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVEGHAAAAPPDGSLRTEVSV 249
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV-VTGRMEAYQEYYIKHVDG 298
++R YTAV +R +DRPKLLFDTVC +TDM+YVV+HGTV AYQEYYI+HVDG
Sbjct: 250 TH-AERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIRHVDG 308
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
I E E+QR++ CL AAIERR ++GLELE+ T DR GLLSDITRI RE GL IRRAEI
Sbjct: 309 HAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEI 368
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGN---LNTPPKLPQEPARS 415
S+ + DTF+++D G PV+ K +++I+ QIG L+V+ N + +
Sbjct: 369 SSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPFGTGDDADMAGAGTTA 428
Query: 416 FFFTNFFK-GRSFQSFKLIK 434
F F N FK R FQSF LIK
Sbjct: 429 FIFGNLFKFYRPFQSFSLIK 448
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 301/440 (68%), Gaps = 11/440 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+AKL+RRMNPPRVVIDN+ + ATVI+VDSVN HG LL V+Q + DLNLVI KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MD F VTD +G K+ D +TISYI+ T+E + + ++VG+VPS +YTSIELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDRPGLLSEV AVL + +V SAE+WTHN R AA++HV D +G AIED R+ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV---NYNSRPHVTI 239
L N+LR + D+R + S A LH ERRLHQM+F DR E + + R V++
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVEGHAATAPPDGSLRTEVSV 249
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV-VTGRMEAYQEYYIKHVDG 298
++R YTAV +R +DRPKLLFDTVC +TDM+YVV+HGTV AYQEYYI+HVDG
Sbjct: 250 TH-AERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIRHVDG 308
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
I E E+QR++ CL AAIERR ++GLELE+ T DR GLLSDITRI RE GL IRRAEI
Sbjct: 309 HAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEI 368
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGN---LNTPPKLPQEPARS 415
S+ + DTF+++D G PV+ K +++I+ QIG L+V+ N + +
Sbjct: 369 SSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNSFGTGDHADVAGAGTTA 428
Query: 416 FFFTNFFK-GRSFQSFKLIK 434
F F N FK R FQSF LIK
Sbjct: 429 FIFGNLFKFYRPFQSFSLIK 448
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/426 (53%), Positives = 303/426 (71%), Gaps = 16/426 (3%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
RV IDN C +ATVI VDS N++GILLEV+Q L DL L++ KAYISSDGG+ MDVF VT+
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 76 INGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLS 131
+G KI D++ + YI ++ ++ FL S R +VGV PS ++T IELTGTDRPGLLS
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLLS 131
Query: 132 EVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
EVSAVLT L C+VVSAE+WTHN RAAA++ V D+ SG A+ D +R+ +IK L NV R
Sbjct: 132 EVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNVFR-- 189
Query: 192 GDLRTPSMSISSARVLHGERRLHQMLFADRDFER-------LDCVNYNSRPHVTILDCSD 244
G R ++++ H ERRLHQM+F DRD+ER N P V++++
Sbjct: 190 GRSRDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVVNWLQ 249
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSE 304
+ Y+ VT+R +DRPKLLFDTVC LTDMQYVV+HG+V T EAYQ+YYI+H+DG P++SE
Sbjct: 250 KYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCPVNSE 309
Query: 305 AERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
AER+R++ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + RAE+ST G +
Sbjct: 310 AERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDE 369
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN--TPPKLPQE-PARSFFFTNF 421
+TF+V DA+G+ V+ + +++I+ +IG+T+LQVKG+ PP Q+ P R F +
Sbjct: 370 AVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPPVAAQDSPTRFLFSSLL 429
Query: 422 FKGRSF 427
F+ RS
Sbjct: 430 FRPRSL 435
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 13 NP-PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
NP P V + N + ++ +V+ V +R +L + + L D+ V+ + ++G +
Sbjct: 237 NPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDY 296
Query: 72 YVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLS 131
Y+ I+G + +A I +E R S G+ +EL+ DR GLLS
Sbjct: 297 YIRHIDGCPVNSEAERKRIIQCLEAAI----ERRVSEGL-------KLELSTGDRVGLLS 345
Query: 132 EVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+V+ + + +V AE+ T A +V+D ++G A+E + +++ VL+
Sbjct: 346 DVTRIFRENGLTVTRAEVSTRGDEAVNTFYVRD-AAGSAVELRTLEAIRQEIGQTVLQVK 404
Query: 192 GDLRTPSMSISS 203
G P +++
Sbjct: 405 GHPEQPKPPVAA 416
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/447 (51%), Positives = 304/447 (68%), Gaps = 13/447 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D +F L +R++PP V IDND CE ++++V+S NRHGILLEV+Q L DL+L+I+KAYI
Sbjct: 9 FDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVE-----TNASFLNSMRSSVGVVPSKE 115
SSDG + MDVF+VTD G K+ DQ I YI+ + + + +VGV E
Sbjct: 69 SSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGE 128
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T+IELTGTDRPGLLSE+SAVLT+L C+VV+AE+WTHN R A +++V D+S+ IE+ +
Sbjct: 129 HTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPE 188
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNS 233
+L IK+ L NVL+ N D R S + H ERRLHQM+FADRD+E D + N
Sbjct: 189 QLAAIKEQLSNVLKGNDDRRGVKTDFSMG-LTHTERRLHQMMFADRDYEGPDTRSLGENG 247
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
RP + I +C+++ Y+ VT+ KDRPKLLFDTVC LTDMQYVV H T+ + A QEYYI
Sbjct: 248 RPIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYI 307
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+H+DG + +E E+QRV+ CLEAAIERR SEG+ LEL T DR GLLSDITRI RE GL +
Sbjct: 308 RHMDGCTLDTEGEKQRVIKCLEAAIERRVSEGVRLELCTSDRVGLLSDITRIFRENGLSV 367
Query: 354 RRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
RA+++T K + F+VTD SGNPVD KIV++++ +IG TILQVK ++P P +
Sbjct: 368 TRADVTTRADKAVNVFYVTDTSGNPVDMKIVEAMRREIGHTILQVKSIPSSPRPCPTDTG 427
Query: 414 --RSFFFTNFFKG---RSFQSFKLIKS 435
F F + K R +F LIKS
Sbjct: 428 DKAKFSFGSLLKSQLERLSYNFGLIKS 454
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/444 (52%), Positives = 312/444 (70%), Gaps = 10/444 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ DEF KL+ RMNPPRV +DN TVI+VDS N+ G LLEV+Q L D+NL + +AYI
Sbjct: 10 LHDEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD NG+K I+ ++ AS S+R SVGV E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV AVL DL C+VV+AE+WTHN+R A+++++ D+++G +I+D RL KI
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH---- 236
K+LL VL+ + D ++ + ++S H +RRLHQ+++ADRD++ D + ++
Sbjct: 190 KQLLLYVLKGDIDKKSANTAVSVGST-HKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLL 248
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
VT+ DC D+ YT V +R DRPKLLFDTVC LTDMQYVVYHGTV+ EAYQEYYI+HV
Sbjct: 249 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 308
Query: 297 DGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356
DG PISSEAERQRV+ CLEAA+ RR SEG++LEL +DR GLLSD+TRI RE GL + RA
Sbjct: 309 DGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRA 368
Query: 357 EISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSF 416
E++T G + + F+VTD SGNPV + +++++ +IG TIL VK ++ + P PQE + F
Sbjct: 369 EVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIGLTILHVKDDVCSKPP-PQESGK-F 426
Query: 417 FFTNFFKGRS---FQSFKLIKSCS 437
+N F+ S + L+KS S
Sbjct: 427 SLSNLFRSSSEKFLYNLGLMKSYS 450
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/447 (51%), Positives = 310/447 (69%), Gaps = 15/447 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF KL+ RMNPPRV +DN T+I+VDS N+ G LLEV+Q L D+NL++ +AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF+VTD NG+KI + I+ ++ S+R SVGV + E+T+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV A+L DL C+VV+AE+WTHN+R A+++++ D ++G I++ RL KI
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLAKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD-----CVNYNSRP 235
K LL VLR + D + + ++S H +RRLHQ+++ADRD++ D N ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCST-HKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
+VT+ DC D+ YT V +R DRPKLLFDTVC +TDMQYVVYHGTV EAYQEYYI+H
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
VDG+PISSEAERQRV+ CLEAA+ RR SEG++LEL +DR GLLSD+TRI RE GL + R
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCR 368
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPP--KLPQEPA 413
AE++T G + + F+VTD SGNPV + +++++ +IG TIL+VK + P K P +
Sbjct: 369 AEVTTRGSQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILRVKDD----PCLKSPTRES 424
Query: 414 RSFFFTNFFKGRS---FQSFKLIKSCS 437
F + + RS + L+KS S
Sbjct: 425 GKFSLRDLVRSRSERFLYNLGLMKSSS 451
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/437 (50%), Positives = 303/437 (69%), Gaps = 12/437 (2%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
+F +LI R R+VIDN+ AT+++VDS N +GILLEVIQ ++DLNLVI KAYI+SD
Sbjct: 12 QFWRLIGR----RIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITSD 67
Query: 64 GGYLMDVFYVTDINGQKIGDQATIS----YIKTTVETNASFLNSMRSSVGVVPSKEYTSI 119
GG+ MDVF VTD G+KI D+AT++ YI+ ++ ++ ++ S R SV V + ++ I
Sbjct: 68 GGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNII 127
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
ELTGTDRPGLLSEVSAVLT L C+VVSAEIWTHN RAAA++ V D+ +G A+ D +RL +
Sbjct: 128 ELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLER 187
Query: 180 IKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD--CVNYNSRPHV 237
I++ L + R G+L + S H ERRLHQM+ D D+E+L + RP+V
Sbjct: 188 IREKLSYLFR-GGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQRPNV 246
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
T+ + +D+DY+ VTIR KDR KLLFDTVC LTD+QYVV+H + +AYQE+Y++HV+
Sbjct: 247 TVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHVN 306
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G P+++E ER RV+ CLEAAIERR SEG++LEL T+D+ GLLS++TRI RE L + RAE
Sbjct: 307 GSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 366
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFF 417
++T GR +TF+V ++G VD K +DSI+ IG + LQVKG P +E F
Sbjct: 367 VTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPPEPQKKESPTWFL 425
Query: 418 FTNFFKGRSFQSFKLIK 434
F N F+ RS SF ++
Sbjct: 426 FANLFRPRSLYSFGFMR 442
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/450 (50%), Positives = 303/450 (67%), Gaps = 29/450 (6%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+AKL+RRMNPPRVVIDND C +ATVI+VD VN+HGILLE +Q LVDLNLVITKAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGT 124
+ M VF VTD +G K+ ++ I +I+ +E++ + +P ++TSIELTG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGA 133
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
DRPGLLSEV AVL LSC++V AE+WTH+ R AA++ V D+++G A+ D RL ++++LL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 CNVLRTNGDLRTPSMSISSARVLHGERRLHQMLF------------ADRDFERLDCVNYN 232
+V+R +G IS+ ERRLH ++ RD E C
Sbjct: 194 RDVMRGDGTCNRGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRD-ESGGC--GV 244
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV----VTGRMEAY 288
+RP V ++DC++R YT V +R +DRPKLLFDT+C L D+QYVV+HGTV + EAY
Sbjct: 245 ARPKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAY 304
Query: 289 QEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILRE 348
QEYYI+HVDG P+ S+AER R++ CLEAA+ERRAS GLELE++T+DR GLLS+ITR+ RE
Sbjct: 305 QEYYIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRE 364
Query: 349 YGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK-GNLNTPPK 407
L I RA I+T K +DTF+V+DA GNPVD + +D++ Q+G +L+VK G + P K
Sbjct: 365 NSLSIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVK 424
Query: 408 LPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
E + K SFQ +LI+S S
Sbjct: 425 HEAEGGAVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/455 (49%), Positives = 302/455 (66%), Gaps = 39/455 (8%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+AKL+RRMNPPRVVIDND C +ATVI+VD VN+HGILLE +Q LVDLNLVITKAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGT 124
+ M VF VTD +G K+ ++ I +I+ +E++ + +P ++TSIELTG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGA 133
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
DRPGLLSEV AVL LSC++V AE+WTH+ R AA++ V D+++G A+ D RL ++++LL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 CNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN------------ 232
+V+R +G IS+ ERRLH ++ LD V
Sbjct: 194 RDVMRGDGTCNHGGTGISA------ERRLHTLM--------LDSVGGGGAEEAGGGGDES 239
Query: 233 -----SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV----VTG 283
+RP V ++DC++R YT V +R +DRPKLLFDT+C L D+QYVV+HGTV +
Sbjct: 240 GGCGVARPKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASK 299
Query: 284 RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDIT 343
EAYQEYYI+HVDG P+ S+AER R++ CLEAA+ERRAS GLELE++T+DR GLLS+IT
Sbjct: 300 DKEAYQEYYIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEIT 359
Query: 344 RILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK-GNL 402
R+ RE L I RA I+T K +DTF+V+DA GNPVD + +D++ Q+G +L+VK G
Sbjct: 360 RVFRENSLSIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGH 419
Query: 403 NTPPKLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
+ P K E + K SFQ +LI+S S
Sbjct: 420 DAPVKHEAEGGAVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/442 (51%), Positives = 310/442 (70%), Gaps = 9/442 (2%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDEF KL+ RMNPPRV +DN AT+I+VDS N+ G LLEV+Q L DLNL+I +AYIS
Sbjct: 10 DDEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYIS 69
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIEL 121
SDG + MDVFYVTD +G K+ + I+ ++ S+R SVGV + E T+IEL
Sbjct: 70 SDGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIEL 129
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
TG DRPGLLSE+ A+LTDL C+VV++E+WTHN+R A+++++ D+++G I+D RL KIK
Sbjct: 130 TGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLTKIK 189
Query: 182 KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS---RPHVT 238
+LL VL+ + D R+ + ++ S H ERRLHQM++ADRD++ D ++ +P VT
Sbjct: 190 QLLLYVLKGDRDKRSANTAV-SVDSTHKERRLHQMMYADRDYDMDDADFGSASERKPFVT 248
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ +C D+ YT V +R DRPKLLFDTVC LTDMQYVVYHGT++ EA QEY+I+H+DG
Sbjct: 249 LENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIRHMDG 308
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
P+SSEAERQRV+ CLEAAI RR SEG+ LEL ++DR GLLSD+TRI RE GL + RAE+
Sbjct: 309 SPVSSEAERQRVINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRAEV 368
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFF 418
+T G + + F+VTD+SG PV + +++++ +IG TIL V + ++ K P + F
Sbjct: 369 TTRGSQAVNVFYVTDSSGYPVKNETIEAVRKEIGLTILHVNDDAHS--KSPPQERGLFSL 426
Query: 419 TNFFKGRS---FQSFKLIKSCS 437
N F+ RS + LI+S S
Sbjct: 427 GNIFRSRSEKFLYNLGLIRSYS 448
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 288/398 (72%), Gaps = 10/398 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVV+DN VC T+++VDS +HGILLE +Q L DLNL I KAYISS
Sbjct: 11 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 70
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ D++ I+YI E + ++ +RS+ T++ELT
Sbjct: 71 DGRWFMDVFHVTDLNGNKLTDESVINYI----EQSLGCIHHVRSN----SFNGLTALELT 122
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C+VV +++WTHN R A+L++VKD SG IED +++ +I+
Sbjct: 123 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 182
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR-PHVTILD 241
L NVL+ + D+R+ S+S A V H ERRLHQM+FADRD+ER + S P VT+ +
Sbjct: 183 RLRNVLKGDNDIRSAKTSVSLA-VTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQN 241
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V ++ KDR KLLFD VC LTDMQYVV+H T+ T +AY E+YI+H DG PI
Sbjct: 242 WVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPI 301
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSEAERQRV+ CL+AAIERRASEG+ LEL T+DR GLL+D+TR RE GL + RAEIST
Sbjct: 302 SSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTT 361
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
+ F+VTDA GNP DPKI+++++ +IG + L+VK
Sbjct: 362 SEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVK 399
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 288/398 (72%), Gaps = 10/398 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVV+DN VC T+++VDS +HGILLE +Q L DLNL I KAYISS
Sbjct: 7 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 66
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ D++ I+YI E + ++ +RS+ T++ELT
Sbjct: 67 DGRWFMDVFHVTDLNGNKLTDESVINYI----EQSLGCIHHVRSN----SFNGLTALELT 118
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C+VV +++WTHN R A+L++VKD SG IED +++ +I+
Sbjct: 119 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 178
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR-PHVTILD 241
L NVL+ + D+R+ S+S A V H ERRLHQM+FADRD+ER + S P VT+ +
Sbjct: 179 RLRNVLKGDNDIRSAKTSVSLA-VTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQN 237
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V ++ KDR KLLFD VC LTDMQYVV+H T+ T +AY E+YI+H DG PI
Sbjct: 238 WVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPI 297
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSEAERQRV+ CL+AAIERRASEG+ LEL T+DR GLL+D+TR RE GL + RAEIST
Sbjct: 298 SSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTT 357
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
+ F+VTDA GNP DPKI+++++ +IG + L+VK
Sbjct: 358 SEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVK 395
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/412 (53%), Positives = 292/412 (70%), Gaps = 13/412 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM PRVVIDN VC ATV++VDS +HGILLE +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTDING K+ D++ I+YI+ ++ T ++ R+ T++ELT
Sbjct: 68 DGRWFMDVFHVTDINGNKLTDESVINYIEQSLGT----IHYGRTH----DFNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C VV A++WTHN R A+L++VKD +SG IED + + +I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHIDRIEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ S+S A V H ERRLHQM+FADRD+ER + +++ P VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSMA-VTHTERRLHQMMFADRDYERKPILRFSADSPVVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V ++ KDR KLLFD VC LTDM+YVV+H T+ T +AY E+YIKH DG PI
Sbjct: 239 WVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFYIKHTDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERRASEG+ LEL T DR GLL+D+TR RE GL + RAEIST
Sbjct: 299 SSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEISTS 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
+ + F+VTDA GNP D KI++S++ +IG + L+VK PP + + A
Sbjct: 359 TKTATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVK---ELPPLMYHQEA 407
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/451 (49%), Positives = 306/451 (67%), Gaps = 23/451 (5%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+AKL+RRMNPPRVVIDND C++ATVI+VD V +HGILLE +Q LVDLNLVITKAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGT 124
+ MDVF VTD +G K+ ++ I +I+ +E++ +L + V P ++TSIELTG
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDG-YLPPPANGGFVPPEDQFTSIELTGA 134
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
DRPGLLSEV AVL LSC++V AE+WTH+ RAAA++ + D+++G AI D RL + ++LL
Sbjct: 135 DRPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELL 194
Query: 185 CNVLRTNG--DLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY----------- 231
N+++++G + +S+ +AR ERRLH+M+ DR + V
Sbjct: 195 SNLMQSDGRCNRGATGVSVGTART---ERRLHKMMLDDRVGGGEEAVGGGEERGGCGKAR 251
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT--GRMEAYQ 289
+ V ++DC++R YT V +R +DRPKLLFDT+C L D+QYVV+HGTV EAYQ
Sbjct: 252 HKAAKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAYQ 311
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELEL--YTDDRFGLLSDITRILR 347
EYYI+HVDG P+ ++AER R++ CLEAA+ERRAS GLELEL T+DR GLLS+ITR+ R
Sbjct: 312 EYYIRHVDGHPVRADAERTRLVRCLEAAVERRASNGLELELEVRTEDRVGLLSEITRVFR 371
Query: 348 EYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK-GNLNTPP 406
E L I RA I+T K +DTF+V+D GNPVD + +D++ Q+G +L+VK +
Sbjct: 372 ENSLSIIRAAITTKDGKAEDTFYVSDTYGNPVDGRTIDAVGEQLGHAVLRVKRRGHDASV 431
Query: 407 KLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
K E + KG SFQ +LI+S S
Sbjct: 432 KHEAEGGAVSVLGSLLKG-SFQGLRLIRSYS 461
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 307/451 (68%), Gaps = 16/451 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKL+RRMNPP VVIDND C+ ATVI+VD V +HGILLE +Q LVDLNLVITKAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF-LNSMRSSVGVVPSKEYTSIE 120
SDG + MDVF VTD +G K+ ++ IK +E+ L + + G PS+E T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSEV AVL L C++V+AE+WTH+ RAAA++ + D+++G + D RL ++
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVL---HGERRLHQMLFADRDF-----ERLDCVNYN 232
++LL NV++ +GD S S+A L + ERRLH+++ D D ER
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAK 253
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT---GRMEAYQ 289
++ V ++DC++R YT V +R +DRP+LLFDT+C LTD+ YVV+HGTV EAYQ
Sbjct: 254 AKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQ 313
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EYY++HVDG P+ +AER R++ CLEAA+ERRAS+GLELE+ T+DR GLLS+ITR+ RE
Sbjct: 314 EYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFREN 373
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLP 409
L I RA I+T + DTF+V+DA GNPVD K ++++ Q+G +L+VK N
Sbjct: 374 SLSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRA 433
Query: 410 QEP---ARSFFFTNFFKGRSFQSFKLIKSCS 437
++ + N KG SFQ F+LI+S S
Sbjct: 434 EDSGGGGAAAIIGNLLKG-SFQGFRLIRSYS 463
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 306/451 (67%), Gaps = 16/451 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKL+RRMNPP VVIDND C+ ATVI+VD V +HGILLE +Q LVDLNLVITKAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVG-VVPSKEYTSIE 120
SDG + MDVF VTD +G K+ ++ IK +E+ + S G PS+E T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIE 133
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSEV AVL L C++V+AE+WTH+ RAAA++ + D+++G + D RL ++
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVL---HGERRLHQMLFADRDF-----ERLDCVNYN 232
++LL NV++ +GD S S+A L + ERRLH+++ D D ER
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAK 253
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT---GRMEAYQ 289
++ V ++DC++R YT V +R +DRP+LLFDT+C LTD+ YVV+HGTV EAYQ
Sbjct: 254 AKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQ 313
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EYY++HVDG P+ +AER R++ CLEAA+ERRAS+GLELE+ T+DR GLLS+ITR+ RE
Sbjct: 314 EYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFREN 373
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLP 409
L I RA I+T + DTF+V+DA GNPVD K ++++ Q+G +L+VK N
Sbjct: 374 SLSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRA 433
Query: 410 QE---PARSFFFTNFFKGRSFQSFKLIKSCS 437
++ + N KG SFQ F+LI+S S
Sbjct: 434 EDSGGGGAASIIGNLLKG-SFQGFRLIRSYS 463
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/451 (50%), Positives = 290/451 (64%), Gaps = 51/451 (11%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DL+L ITKAYI
Sbjct: 12 MDDEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYI 71
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VT +G K+ D+ + YI+ ++ A F S+R SVGV+PS + T IE
Sbjct: 72 SSDGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLR-SVGVIPSTDSTVIE 130
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE++AVLT L CSV++AE+WTHN RAAA++ V D +G A+ D +RL I
Sbjct: 131 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLI 190
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS------- 233
K LL NVL+ + + +S V H +RRLHQM+F DRD+E V+ +S
Sbjct: 191 KSLLRNVLKGSNTPKEAKTVVSQGEV-HTDRRLHQMMFEDRDYENGVMVDDDSSNVQDER 249
Query: 234 -RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
RP V + + D+DY+ VT+R KDRPKLLFDTVC LTDMQYVV+HG+V T EA+QEY
Sbjct: 250 QRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEY- 308
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLC 352
GL+LEL T DR GLLS++TRI RE L
Sbjct: 309 --------------------------------GLKLELCTTDRVGLLSNVTRIFRENSLT 336
Query: 353 IRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKG------NLNTPP 406
+ RAE+ T G K +TF+V+DASG +D K +DSI+ IG+T+L+VK PP
Sbjct: 337 VTRAEVKTKGGKAVNTFYVSDASGYSIDAKTIDSIRQTIGKTLLKVKNKPKDQQQREKPP 396
Query: 407 KLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
QE F F FK +SF +F L++S S
Sbjct: 397 S--QESPTRFLFGGLFKSKSFVNFGLVRSYS 425
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 297/446 (66%), Gaps = 23/446 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KLI RMN PRVVIDN V AT+++VDS RHGILL+ ++ L DLNL I KAYIS+
Sbjct: 8 DEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAYISA 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG KI D++ + YI E + ++ R+++ S T++ELT
Sbjct: 68 DGKWFMDVFHVTDQNGNKIIDESVLKYI----EQSLGNIHYGRTNL----SNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C VV +++WTHN R A+L++VKD SSG AIED +++ KI+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIEL 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ +S S A V+H ERRLHQ++F DRD+ER + S VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKISFSMA-VMHTERRLHQLMFVDRDYERAPILKLTSDNASVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
R Y+ V ++ KDR KLLFD VC LTDM+YVV+H T+ T AY E+YI+H DG PI
Sbjct: 239 WEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERRASEG+ LEL T+DR GLL+++ R RE GL + RAEIST+
Sbjct: 299 SSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRAEISTI 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS------ 415
G K+ F+VTDA GNP D KI++S++ +IG + L+VK P QE R
Sbjct: 359 GNMAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVK---ELPLINHQEAEREDQAVGM 415
Query: 416 ----FFFTNFFKGRSFQSFKLIKSCS 437
R+ LIKSCS
Sbjct: 416 GGAVLLSIGSLVRRNLYHLGLIKSCS 441
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/447 (50%), Positives = 297/447 (66%), Gaps = 25/447 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KLI RM+ PRVVIDN VC AT+++VDS RHGILL+ +Q L DLNL I KAYIS+
Sbjct: 8 DEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISA 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG KI D++ + YI+ ++ N + + RS+ T++ELT
Sbjct: 68 DGKWFMDVFHVTDQNGNKIMDESVLKYIEQSL-GNIHYGRTNRSN-------GLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G+DR GLLSEV AVL DL C V A++WTHN R A+L++VKD SSG AIED +++ KI+
Sbjct: 120 GSDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIEL 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ MS+S A V+H ERRLHQ++F DRD+ER + S P VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKMSVSMA-VMHTERRLHQLMFVDRDYERTPILKLTSDNPLVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
R Y+ V ++ KDR KLLFD VC LTDM+YVV+H T+ T AY E+YI+H DG PI
Sbjct: 239 WEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIRHKDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERRASEG+ LEL T+DR GLL+++ R RE GL + RAEIST+
Sbjct: 299 SSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTI 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS------ 415
G + F+VTDA G P D KI++S++ +IG + L+VK P + + A
Sbjct: 359 GNMATNIFYVTDAIGIPADSKIIESVRQKIGLSNLEVK----ELPLINHQEAEGEDQAVG 414
Query: 416 -----FFFTNFFKGRSFQSFKLIKSCS 437
R+ LIKSCS
Sbjct: 415 IGGAVLLSIGSLLRRNLYHLGLIKSCS 441
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/435 (51%), Positives = 303/435 (69%), Gaps = 10/435 (2%)
Query: 10 RRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMD 69
+ +P V +DN TVI+VDS N+ G LLEV+Q L D+NL + +AYISSDG + MD
Sbjct: 125 KPWDPVLVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMD 184
Query: 70 VFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGL 129
VF+VTD NG+K I+ ++ AS S+R SVGV E+T+IELTG DRPGL
Sbjct: 185 VFHVTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGL 244
Query: 130 LSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
LSEV AVL DL C+VV+AE+WTHN+R A+++++ D+++G +I+D RL KIK+LL VL+
Sbjct: 245 LSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLK 304
Query: 190 TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH----VTILDCSDR 245
+ D ++ + ++S H +RRLHQ+++ADRD++ D + ++ VT+ DC D+
Sbjct: 305 GDIDKKSANTAVSVGST-HKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDK 363
Query: 246 DYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEA 305
YT V +R DRPKLLFDTVC LTDMQYVVYHGTV+ EAYQEYYI+HVDG PISSEA
Sbjct: 364 GYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEA 423
Query: 306 ERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKV 365
ERQRV+ CLEAAI RR SEG++LEL +DR GLLSD+TRI RE GL + RAE++T G +
Sbjct: 424 ERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQA 483
Query: 366 KDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGR 425
+ F+VTD SGNPV+ + +++++ +IG TIL VK ++ + P PQE + F +N F+
Sbjct: 484 MNVFYVTDVSGNPVNSETIEAVRKEIGLTILHVKDDVCSKPP-PQESGK-FSLSNLFRSS 541
Query: 426 S---FQSFKLIKSCS 437
S + L+KS S
Sbjct: 542 SEKFLYNLGLMKSYS 556
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/412 (52%), Positives = 290/412 (70%), Gaps = 13/412 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM PRVVIDN V ATV++VDS +H ILLE +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ D++ I+YI+ ++ T ++ +++ S T++ELT
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGT----IHPGKTT----GSNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL CSVV A++WTHN R A+L++VKD +SG IED + + +I+
Sbjct: 120 GTDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ +S A V H ERRLHQ++FADRD+ER + + P VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKTMVSMA-VTHTERRLHQVMFADRDYERKPILQPSGDSPVVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V ++ KDR KLLFD VC LTDM+Y+V+H T+ T AY E+YI+H DG PI
Sbjct: 239 WVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERRASEG+ LEL T DR GLL+D+TR RE GL + RAEIST
Sbjct: 299 SSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEISTA 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
G + F+VTDA GNP DPK+++S++ +IG + L+VK PP + + A
Sbjct: 359 GDMALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVK---ELPPLIYHQEA 407
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 300/443 (67%), Gaps = 9/443 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDEF KL+ RMNPPRV +DN AT+I+VDS N+ G LLEV+Q L DLNL+I +AYI
Sbjct: 9 MDDEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD +G K+ + I+ ++ S+R SV V + E+T+IE
Sbjct: 69 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIE 128
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSE+ AVL L C+VV++EIWTHN+R A+++++ D+++G I+D RL KI
Sbjct: 129 LTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLTKI 188
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQML--FADRDFERLDCVNYNSRPH-V 237
K+LL +L + D R+ + ++S H ERRLHQM+ D D + DC + + R V
Sbjct: 189 KQLLLCILIGDRDKRSANTAVSVGST-HKERRLHQMMYADRDYDVDDADCSSASERNRFV 247
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
T+ +C D+ YT V +R DRPKL+FDTVC LTDMQYVVYH ++ EA QEY+I+H+D
Sbjct: 248 TVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHMD 307
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G PI+SEAERQR++ CLEAAI RR SEG+ LEL ++DR GLLSD+TRI RE GL + RAE
Sbjct: 308 GSPINSEAERQRLINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRAE 367
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFF 417
++T G + + FFVTD+SG+PV + +++++ +IG TIL V N + K P +
Sbjct: 368 VTTRGSQAVNVFFVTDSSGHPVKSETIEAVRKEIGLTILNV--NDDAYSKSPPQERGLLS 425
Query: 418 FTNFFKGRS---FQSFKLIKSCS 437
N F+ +S LIKS S
Sbjct: 426 LGNIFRSKSEKFLYHLGLIKSNS 448
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/458 (49%), Positives = 305/458 (66%), Gaps = 25/458 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L RR+NPP V IDND C T+I+VDS N+HGILLEV+Q L DL+L I+KAYI
Sbjct: 9 FDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLTISKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTT-----VETNASFLNSMRSSVGVVPSKE 115
SSDGG+ MDVF+VTD G K+ D++ I YI+ + V ++ + VGV E
Sbjct: 69 SSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGE 128
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
YT+IELTGTDRPGLLSE+SAVLT SC+VV+AE WTHN R A +++V D+SS IED+
Sbjct: 129 YTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEV 188
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE------RLDCV 229
RL IK L NVL+ N D + S + H ERRLHQ++FADRD+E +
Sbjct: 189 RLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSSDSSNPSLL 248
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ N +P +T+ +C+++ Y+ V I+ +DRPKLLFDTVC LTDMQYVV+H ++ A Q
Sbjct: 249 DENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQ 308
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EYYI+H+DG + +E E+ RV+ CLEAAI RRASEGL LEL DR GLLSD+TR+ RE
Sbjct: 309 EYYIRHMDGCTLDTEGEKHRVIKCLEAAIGRRASEGLSLELSASDRIGLLSDVTRMFREN 368
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDA-SGN---PVDPKIVDSIQHQIGRTI-LQVK---GN 401
GL + RA+++T G K + F+V DA SGN +D K+V++++ +IG T+ LQVK G+
Sbjct: 369 GLSVTRADVTTRGDKAINVFYVRDASSGNLAINIDMKVVEAMRREIGHTMFLQVKNMPGD 428
Query: 402 L--NTPPKLPQEPARSFFFTNFFKG---RSFQSFKLIK 434
+ N+ P + R F F + FK R +F++IK
Sbjct: 429 IAYNSLPIDSRSKFR-FSFASLFKAQLDRISYNFRMIK 465
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/410 (49%), Positives = 291/410 (70%), Gaps = 12/410 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ LI R+N P VVIDN C+ AT+++VDS N+HGILLEV+Q L DL+L I+KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ DQ I YI+ ++ T + S+ +VG S +
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL+G DRPGLLSE+S VLT ++C+VV+AE+WTHN R A +++V D+++GC I+D ++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE------RLDCV- 229
L ++K+ L VLR + + R + SS + H ERRLHQM+ ADRD++ ++ V
Sbjct: 189 LARMKEQLSQVLRGDDENRLATTDFSSG-LTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ RP +++ +C ++ Y+ V+++ KDRPKLLFDTVC LTDM+YVV+H + AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EYYI+H+DG + +AE++RV+ CLEAAIERR SEGL LEL T DR GLLSD+TR+ RE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREK 367
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
GL + RA++ST G + + F+VTD SG V K+V++++ +IG+ IL+VK
Sbjct: 368 GLSVTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVK 417
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/410 (49%), Positives = 291/410 (70%), Gaps = 12/410 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ LI R+N P VVIDN C+ AT+++VDS N+HGILLEV+Q L DL+L I+KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ DQ I YI+ ++ T + S+ +VG S +
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL+G DRPGLLSE+S VLT ++C+VV+AE+WTHN R A +++V D+++GC I+D ++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE------RLDCV- 229
L ++K+ L VLR + + R + SS + H ERRLHQM+ ADRD++ ++ V
Sbjct: 189 LARMKERLSQVLRGDDENRLATTDFSSG-LTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ RP +++ +C ++ Y+ V+++ KDRPKLLFDTVC LTDM+YVV+H + AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EYYI+H+DG + +AE++RV+ CLEAAIERR SEGL LEL T DR GLLSD+TR+ RE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREK 367
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
GL + RA++ST G + + F+VTD SG V K+V++++ +IG+ IL+VK
Sbjct: 368 GLSVTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVK 417
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/398 (52%), Positives = 285/398 (71%), Gaps = 10/398 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM+ PRVVIDN VC AT+++VDS +HGIL++ +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG K+ D++ +SYI+ ++ S N+ + S T +ELT
Sbjct: 68 DGRWFMDVFHVTDENGDKLTDKSVLSYIEQSL---GSIHNAKTNH-----SNGLTILELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL + C VV A++WTHN R A+L++VKD +SG IED +R+ I+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R S+++A VLH ERRLHQM++ DRD++R + + S P VT+ +
Sbjct: 180 RLRNVLKGDNDIRNAKTSVTNA-VLHAERRLHQMMYTDRDYQRNPILKFASVTPIVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
++R Y+ V I+ KDR KLLFD VC LTDM+YVV+H T+ T +AY E+YI+H DG PI
Sbjct: 239 WAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHRDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ER RV+ CL+AA+ERRA EG+ LEL T+DR GLL+++ R RE G+ + RAEIST+
Sbjct: 299 SSEPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGMNVTRAEISTI 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
G + F+VTDA G PVDPKIV+S++ ++G + L+VK
Sbjct: 359 GNMASNVFYVTDAVGYPVDPKIVESVRQKVGLSNLKVK 396
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/412 (52%), Positives = 287/412 (69%), Gaps = 13/412 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM PRVVIDN VC ATV++VDS +HGILLE +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ D++ I+YI+ ++ T ++ R + S T++ELT
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVT----IHYGRKT----GSNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C+VV A++WTHN R AAL+ VKD +SG IED +++ +I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ +S A V H ERRLHQM+FADRD+ER + + P VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKTMVSMA-VTHTERRLHQMMFADRDYERNPILQPSGDSPVVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V ++ +DR KLLFD VC LTDM+Y+V+H T+ T AY E+YI+H DG PI
Sbjct: 239 WVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERR SEG+ LEL T DR LL+D+TR RE GL + RAEIST
Sbjct: 299 SSEPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGLNVTRAEISTT 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
+ F+VTDA GN DPK+++S++ +IG + L+VK PP + + A
Sbjct: 359 RDMALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVK---ELPPLVYHQEA 407
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/439 (49%), Positives = 292/439 (66%), Gaps = 29/439 (6%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
RVVIDND C +ATVI+VD VN+HGILLE +Q LVDLNLVITKAYISSDG + M VF VTD
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 76 INGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSA 135
+G K+ ++ I +I+ +E++ + +P ++TSIELTG DRPGLLSEV A
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGADRPGLLSEVCA 128
Query: 136 VLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLR 195
VL LSC++V AE+WTH+ R AA++ V D+++G A+ D RL ++++LL +V+R +G
Sbjct: 129 VLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCN 188
Query: 196 TPSMSISSARVLHGERRLHQMLF------------ADRDFERLDCVNYNSRPHVTILDCS 243
IS+ ERRLH ++ RD E C +RP V ++DC+
Sbjct: 189 RGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRD-ESGGC--GVARPKVVVMDCA 239
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV----VTGRMEAYQEYYIKHVDGF 299
+R YT V +R +DRPKLLFDT+C L D+QYVV+HGTV + EAYQEYYI+HVDG
Sbjct: 240 ERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIRHVDGH 299
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
P+ S+AER R++ CLEAA+ERRAS GLELE++T+DR GLLS+ITR+ RE L I RA I+
Sbjct: 300 PVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSIIRAAIT 359
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK-GNLNTPPKLPQEPARSFFF 418
T K +DTF+V+DA GNPVD + +D++ Q+G +L+VK G + P K E
Sbjct: 360 TRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEGGAVSVL 419
Query: 419 TNFFKGRSFQSFKLIKSCS 437
+ K SFQ +LI+S S
Sbjct: 420 GSLLKS-SFQGLRLIRSYS 437
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY----LMDV 70
P+VV+ + TV+ + +R +L + + L DL V+ + ++G
Sbjct: 231 PKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQE 290
Query: 71 FYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLL 130
+Y+ ++G + A + + +E R+S G+ +E+ DR GLL
Sbjct: 291 YYIRHVDGHPVRSDAERARLVRCLEAAV----ERRASNGL-------ELEVWTEDRVGLL 339
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
SE++ V + S S++ A I T + +A +V D
Sbjct: 340 SEITRVFRENSLSIIRAAITTRDGKAEDTFYVSD 373
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 300/451 (66%), Gaps = 24/451 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN C AT+++VDS R G LLE +Q L DLNL I KAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG+K+ D++ ISY++ ++ T N + T++ELT
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTT-------TALELT 120
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C VV A++WTHN R A+L++VKD +SG IED++++ I
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER--LDCVNYNSRPHVTIL 240
L +VL+ + D+R+ S+S A V H ERRLHQM+FADRD+ER + +N ++ P VT+
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMA-VTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQ 239
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+C++R Y+ V ++ KDR KLLFD + LTDMQYVV+H + T + AY E+YI+H DG P
Sbjct: 240 NCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTP 299
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
ISSEAERQRV+ CL+AAI+RRASEG+ LEL T+DR GLL+D+ R RE GL + RAEIST
Sbjct: 300 ISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFRENGLNVTRAEIST 359
Query: 361 MGRKVKDT-------FFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA 413
++ T F+VTD GN D K ++S++ +IG + L+VK +T + +
Sbjct: 360 TRAEISTTRDMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREE 419
Query: 414 RSF-------FFTNFFKGRSFQSFKLIKSCS 437
++F F R+ + LI+SCS
Sbjct: 420 QTFGVGGAVLFTLGSMVRRNLYNLGLIRSCS 450
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/463 (46%), Positives = 300/463 (64%), Gaps = 29/463 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRVVIDN V EHAT+I++DS NRHGILL+V+Q L DL+L I KA+I
Sbjct: 14 FDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFI 73
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF+VTD +G K+ D+ I++I+ A S ++GV E+T+IE
Sbjct: 74 SSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIE 133
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD-QSSGCAIEDQKRLLK 179
LTG DRPGLLSE+SAVL L C+VV+AE+WTHN R A +++V D + G ++D +L
Sbjct: 134 LTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCH 193
Query: 180 IKKLLCNVLRTNG-DLRTPSMSISSARVLHGERRLHQMLFADRDFERL------------ 226
IK++L V++ + D +T + + H ERRLHQM+ AD++ E
Sbjct: 194 IKQMLGQVMKGDSLDGKTARTDFAMG-LTHTERRLHQMMSADKEEEMEVAEEEAALSPAP 252
Query: 227 ----DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
D V+Y RP VT+ +C ++ Y+ VT++ DRPKLLFDTVC LTDM+YVV+H T+ +
Sbjct: 253 TSISDSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDS 312
Query: 283 GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDI 342
A+QEYYI+H+DG+ +++E ERQRV+ CLEAAI RRAS+G+ LEL T DR GLLSD+
Sbjct: 313 EGPNAFQEYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQGVRLELSTQDRIGLLSDV 372
Query: 343 TRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNL 402
TRI RE GL + RAE++T + F+VTDA+G VD ++V++I+ ++G IL+V
Sbjct: 373 TRIFRENGLSVARAEVTTRDDMAVNVFYVTDANGGSVDMRVVEAIREEVGLAILKVTQER 432
Query: 403 NTPPKLPQEPARS-------FFFTNFFKGRS---FQSFKLIKS 435
P L P S F +FF+ S + L+KS
Sbjct: 433 FPPKMLHSSPTESADKSAARFSLGSFFRSHSERLLYTLGLLKS 475
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y ET A+ +N R + S+ T I+L ++R G+L +V VLTDL S++ A
Sbjct: 13 YFDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAF 72
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK-KLLCNVLRTNGDLRT 196
I + + HV D+ G + D+K + I+ K +C RT RT
Sbjct: 73 ISSDGGWFMDVFHVTDR-DGNKLSDEKVIAHIEHKGVCQAYRTCSGART 120
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/378 (54%), Positives = 274/378 (72%), Gaps = 6/378 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF KL+ RMNPPRV +DN T+I+VDS N+ G LLEV+Q L D+NL++ +AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF+VTD NG+KI + I+ ++ S+R SVGV + E+T+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG DRPGLLSEV A+L DL C+VV+AE+WTHN+R A+++++ D ++G I++ RL KI
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKI 189
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD-----CVNYNSRP 235
K LL VLR + D + + ++S H +RRLHQ+++ADRD++ D N ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCST-HKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
+VT+ DC D+ YT V +R DRPKLLFDTVC +TDMQYVVYHGTV EAYQEYYI+H
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
VDG+PISSEAERQRV+ CLEAA+ RR SEG++LEL +DR GLLSD+TRI RE GL + R
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCR 368
Query: 356 AEISTMGRKVKDTFFVTD 373
AE++T G + + F+VTD
Sbjct: 369 AEVTTRGSQAMNVFYVTD 386
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 290/438 (66%), Gaps = 11/438 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C +T+I+VDS+N+ GILLEV+Q L DL+L+ITKAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSS--VGVVPSKEYTS 118
SSDGG+ MDVF+VTD G+KI D TI YI+ + + S VGV ++T+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTA 128
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IELTG DRPGLLSE+SAVL +L +VV+AE+WTHN R A +++V D ++ A++D RL
Sbjct: 129 IELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLS 188
Query: 179 KIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY-----NS 233
++ L N+LR D + S H +RRLHQMLFADRD+E +
Sbjct: 189 AMEDQLKNILRGCDDDEKEGRTSFSMGFTHVDRRLHQMLFADRDYEGGIVATEIHDPPSF 248
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
+P +T+ C ++ Y+ VT+R KDR KL+FD VC LTDMQYVV+H T+ + A QEYYI
Sbjct: 249 KPKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYI 308
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+H+DG + +E E+ RV+ CLEAAI RR SEGL LEL DR GLLS++TRILRE GL +
Sbjct: 309 RHMDGCVLDTEGEKDRVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLSV 368
Query: 354 RRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP- 412
RA + T+G + + F+V DASGNPVD KI+++++ +IG T++ N+ PP +EP
Sbjct: 369 SRAGVMTIGEQAMNVFYVRDASGNPVDMKIIEALRREIGHTMML---NVKKPPVSSREPE 425
Query: 413 ARSFFFTNFFKGRSFQSF 430
AR + T+FF G + F
Sbjct: 426 ARGWAKTSFFFGNLLERF 443
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV + T I++ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
I + + HV DQ G I D K + I+K L
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKIADLKTIDYIEKAL 102
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 298/446 (66%), Gaps = 23/446 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM+ PRVVIDN VC AT+++V S R+G LL IQ L+DLNL+I KAYISS
Sbjct: 8 DEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VT NG KI D+ + YI+ ++ + +++R++ S T +EL+
Sbjct: 68 DGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGST----HNVRTNC----SNGLTVLELS 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C VV A++WTHN R A+L++VKD SG IED +++ KI+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEV 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R+ S+S + V+H ERRLHQM+FADRD+ER + S VT+ +
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSMS-VMHSERRLHQMMFADRDYERTPILKLTSDNTLVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
++R Y+ V I+ KDR KLLFD VC LTDM+YVV+H T+ T +AY E+YI+H DG PI
Sbjct: 239 WAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+A++ERRASEG++L+L T+D+ GLL+++ R RE GL + RAEIST+
Sbjct: 299 SSEPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRAEISTL 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS------ 415
+ F+VTD +G P DP ++S++ +IG + L+VK P Q+ R
Sbjct: 359 ENMATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVK---ELPLIYHQKTEREDQTVGI 415
Query: 416 ----FFFTNFFKGRSFQSFKLIKSCS 437
+F R+ S LIKSCS
Sbjct: 416 GGAVLWFIGSLVRRNLYSLGLIKSCS 441
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/447 (48%), Positives = 295/447 (65%), Gaps = 25/447 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM+ PRVVIDN VC AT+++VDS +HGIL++ +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG K+ D++ +SYI+ ++ S N S S T +ELT
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLSYIEQSL---GSIHNGKTSH-----SNGLTILELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL + C VV A++WTHN R A+L++VKD +S IED +R+ I+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+R S+++A VLH ERRLHQM++ DRD++R ++S P VT+ +
Sbjct: 180 RLRNVLKGDNDIRNAKTSVTNA-VLHAERRLHQMMYTDRDYQRNPIFKFSSDTPIVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
++R Y+ V ++ KDR KLLFD VC LT+M+YVV+H T+ T +AY E+YI+H DG PI
Sbjct: 239 WAERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHKDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ER RV+ CL+AA+ERRA EG+ LEL T+DR GLL+++ R RE GL + RAEIST+
Sbjct: 299 SSEPERHRVIQCLQAAVERRAFEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTI 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS------ 415
G + F+VTDA G P DPKIV+S++ ++G + L+VK P + E A
Sbjct: 359 GDMASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVK----ELPLVCHEKAEREDQPVG 414
Query: 416 -----FFFTNFFKGRSFQSFKLIKSCS 437
R+ + LIKSCS
Sbjct: 415 VGGAVLLCLGSLVRRNLYNLGLIKSCS 441
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/450 (48%), Positives = 298/450 (66%), Gaps = 23/450 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN C AT+++VDS R G LLE +Q L DLNL I KAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG+K+ D++ ISY++ ++ T N + T++ELT
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTT-------TALELT 120
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL DL C VV A++WTHN R A+L++VKD +SG IED++++ I
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER--LDCVNYNSRPHVTIL 240
L +VL+ + D+R+ S+S A V H ERRLHQM+FADRD+ER + +N ++ P VT+
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMA-VTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQ 239
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+C++R Y+ V ++ KDR KLLFD + LTDMQYVV+H + T + AY E+YI+H DG P
Sbjct: 240 NCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTP 299
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLS------DITRILREYGLCIR 354
ISSEAERQRV+ CL+AAI+RRASEG+ LEL T+DR GLL+ D+ R RE GL +
Sbjct: 300 ISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFDVMRTFRENGLNVT 359
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
RAEIST + F+VTD GN D K ++S++ +IG + L+VK +T + + +
Sbjct: 360 RAEISTTRHMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREEQ 419
Query: 415 SF-------FFTNFFKGRSFQSFKLIKSCS 437
+F F R+ + LI+SCS
Sbjct: 420 TFGVGGAVLFTLGSMVRRNLYNLGLIRSCS 449
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/398 (52%), Positives = 278/398 (69%), Gaps = 10/398 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE++KLI RMN PRVVIDN VCE AT+++VDS RHGILLE +Q L DLNL I KAYISS
Sbjct: 15 DEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLSIQKAYISS 74
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+ G K+ D+ ISY++ ++ T ++ + + S + T++ELT
Sbjct: 75 DGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLAT----IHCGKPAT----SNDLTALELT 126
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL +L C VV A++WTHN R A+L++VKD +SG I++ +R+ I
Sbjct: 127 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTIVG 186
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTILD 241
L NVL+ + D+ S+S V H ERRLHQM+FADRD+ER + P VT+ +
Sbjct: 187 RLRNVLKGDDDILYAKTSVSMT-VTHTERRLHQMMFADRDYERKPVQQHTEDSPVVTVQN 245
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ V I+ KDR KLLFD +C +TDM YVV+HGT+ T R AY E+YI+H DG PI
Sbjct: 246 LVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFYIRHTDGTPI 305
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSEAERQRV+ CL+A+IERR S G+ LEL T DR LL+D+TR RE GL + RAE+ST
Sbjct: 306 SSEAERQRVIQCLQASIERRTSRGVRLELCTTDRPCLLADVTRTFRENGLNVTRAEVSTS 365
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
+ F+VTD G+ D K++DS++ +IG + L+VK
Sbjct: 366 QEVALNLFYVTDGHGSAADTKMIDSVREKIGMSNLKVK 403
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 291/438 (66%), Gaps = 12/438 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C +T+++VDS+N+ GILLEV+Q L DL+L+ITKAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV--ETNASFLNSMRSSVGVVPSKEYTS 118
SSDGG+ MDVF+VTD G+KI D TI YI+ + ++ VGV +T+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTA 128
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IEL G DRPGLLSE+SAVL +L +VV+AE+WTHN+R A +++V D ++ A+ D RL
Sbjct: 129 IELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLS 188
Query: 179 KIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER---LDCVNY--NS 233
++ L N+LR + S S H +RRLHQMLFADRD+E V+Y +
Sbjct: 189 IMEDQLKNILRGCENDEAGRTSFSMG-FTHVDRRLHQMLFADRDYEGGIVATEVDYPPSI 247
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
+P +T+ C D+ Y+ VT+R KDR KL+FD VC LTDMQYVV+H T+ + A QEYYI
Sbjct: 248 KPKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYI 307
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+H+DG + +E E++RV+ CLEAAI RR SEGL LEL DR GLLS++TRILRE GL +
Sbjct: 308 RHMDGCVLDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLAV 367
Query: 354 RRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP- 412
RA + T+G + + F+V DASGNPVD KI+++++ +IG T++ N+ P +EP
Sbjct: 368 SRAGVMTIGEQATNVFYVRDASGNPVDTKIIEALRKEIGHTMML---NVKKTPASSREPE 424
Query: 413 ARSFFFTNFFKGRSFQSF 430
AR + T+FF G + F
Sbjct: 425 ARGWAKTSFFFGNLLERF 442
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV + T +++ ++PG+L EV VLTDL + A
Sbjct: 8 YFDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
I + + HV DQ G I D K + I+K L
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKITDIKTIDYIEKAL 102
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/375 (54%), Positives = 269/375 (71%), Gaps = 8/375 (2%)
Query: 68 MDVFYVTDINGQKIGDQAT----ISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTG 123
M VF VTD NGQKI D++ + YI + ++ FL S R SVGV PS +YT IELTG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
TDRPGLLSEVSAVLT+L C+VV+AE+WTHN RAAA++ V D+ +G AI D +RL +IK+
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC--VNYNSRPHVTILD 241
L V + + + +++ + H ERRLHQ++ DRD+ER D N N P V++++
Sbjct: 121 LSYVFKGSNRSQDTKTTVTMG-ITHTERRLHQLMLEDRDYERYDKDRTNVNPTPVVSVVN 179
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
D+DY+ V IR KDRPKLLFDTVC LTDMQYVV+HG+V + EAYQEYYI+H+DG P+
Sbjct: 180 WLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDGSPV 239
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
+SEAERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE GL + RAE+ST
Sbjct: 240 NSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTR 299
Query: 362 GRKVKDTFFVTDASG-NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTN 420
G K +TF+V DA+G + VD K +++I+ +IG+T+LQVKG+ + PQE F F++
Sbjct: 300 GDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFLFSS 359
Query: 421 FFKGRSFQSFKLIKS 435
F+ RS S LI+S
Sbjct: 360 LFRPRSLYSLGLIRS 374
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 12 MNP-PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
+NP P V + N + + +V+ + +R +L + + L D+ V+ + S+G
Sbjct: 169 VNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQE 228
Query: 71 FYVTDINGQKIGDQA----TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDR 126
+Y+ I+G + +A I ++ +E S E +EL+ DR
Sbjct: 229 YYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS---------------EGLKLELSTGDR 273
Query: 127 PGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCN 186
GLLS+V+ + + +V AE+ T +A +V+D + A+ D K L I++ +
Sbjct: 274 VGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIRQEIGQ 332
Query: 187 -VLRTNG 192
VL+ G
Sbjct: 333 TVLQVKG 339
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 284/398 (71%), Gaps = 10/398 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RM+ PRVVIDN VC ++T+++ DS +HGILLE +Q L DLNL I KAY+SS
Sbjct: 8 DEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD NG K+ D++ + YI+ ++ + + + R+ + T++EL
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL--------TALELK 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSEV AVL +L C VV A++WTHN R A+L++VKD +G +IED +++ +++
Sbjct: 120 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEA 179
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR-PHVTILD 241
L VL+ + D+R+ + SIS A V+H ERRLHQM+FADRD++ ++S P VT+ +
Sbjct: 180 RLRYVLQGDSDIRSATTSISDA-VIHPERRLHQMMFADRDYQMNPIFKFSSETPVVTVQN 238
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
++R Y+ V ++ KDR KLLFD VC LTDM+YVV+H T+ T +AY E+YI+H DG PI
Sbjct: 239 WAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKDGTPI 298
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SSE ERQRV+ CL+AA+ERR+ EG+ LEL T+DR GLL+++ R RE GL + RA+I+T
Sbjct: 299 SSEPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRADITTT 358
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
G + F+ TDA G P D KI++S++ +IG T L+VK
Sbjct: 359 GDLAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVK 396
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 265/352 (75%), Gaps = 12/352 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN ++ATVI+VDS N+ GILLEV+Q L DLNL+ITKAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + F +MR SVGV + ++T+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G+DRPGLLSEVSAVLT+L C++V+AE+WTHN RAAA++HV D+ +G AI D +RL I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN--SRPHVT 238
K+LLCNVL G+ + + ++ + H +RRLHQM+F DRD+ER+D +++ RP+V
Sbjct: 196 KELLCNVL-GGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVD 254
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+++ SD+DY+ VTI +DRPKL+FDTVC LTDMQYVV+H + +AYQEYYIKH+DG
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDG 314
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
P+ S+AERQRV+ CLEAAIERR SE +L L +LSDI+ I ++G
Sbjct: 315 SPVKSDAERQRVIHCLEAAIERRVSEVRDLML-------VLSDIS-IASKFG 358
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
++ G+L ++ +IL + L I +A IS+ G D F VTD GN V D I+D I+ +G
Sbjct: 52 NKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLG 111
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 292/440 (66%), Gaps = 13/440 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C T+I+VDS+N+ GILLEV+Q L D++L+ITKAYI
Sbjct: 27 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 86
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS----SVGVVPSKEY 116
SSDGG+ MDVF+VTD G KI D I YI+ + ++ +++ VGV ++
Sbjct: 87 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 146
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL DL +VV AE+WTHN R A +++V D ++ A++D R
Sbjct: 147 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 206
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC---VNY-- 231
L +++ L NVLR D + + S H +RRLHQMLFADRD+E +Y
Sbjct: 207 LSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEADYPP 266
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ +P +TI C D+ Y+AV++ KDRPKL+FD VC LTDMQYVV+H ++ + A QEY
Sbjct: 267 SFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEY 326
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+H+DG + +E E++RV+ CLEAAI RR SEGL LEL DR GLLS++TR+LRE+GL
Sbjct: 327 FIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGL 386
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
+ RA +ST+G + + F+V DASG PVD K +++++ +IG T++ N+ P +
Sbjct: 387 SVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMML---NVKKEPSSAKT 443
Query: 412 P-ARSFFFTNFFKGRSFQSF 430
P A + T+FF G F+ F
Sbjct: 444 PEASGWAKTSFFFGSLFERF 463
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E + +N R SV + + T I++ ++PG+L EV +LTD+ + A
Sbjct: 26 YFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAY 85
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G I D K + I+K L GD +I +
Sbjct: 86 ISSDGGWFMDVFHVTDQ-QGNKITDGKIIDYIEK----ALGPKGD------TIDGVKTWP 134
Query: 209 GER-RLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
G+R +H + D+TA+ + KDRP LL +
Sbjct: 135 GKRVGVHSV----------------------------GDHTAIELIGKDRPGLLSEISAV 166
Query: 268 LTDMQYVVYHGTVVT 282
L D+ + V V T
Sbjct: 167 LADLHFNVVGAEVWT 181
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 291/442 (65%), Gaps = 16/442 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT+++VDS R+GILLE +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ DQ+ + YI+ ++ET N + T++ELT
Sbjct: 68 DGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGEN--------IEVNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSE+ AVL+DL+C VV A++WTHN R A++++++D SSG I D +R+ KI+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEG 179
Query: 183 LLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHV--TI 239
L NVL + D+ + + + +S ++H ERRLHQ++F DRD+ER S P V T+
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYERRSNKQETS-PTVVVTV 238
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
+ ++R Y+ V + +DR KLLFD VC LTDM+Y V+H T+ T +A+ E+YI+H DG
Sbjct: 239 QNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGS 298
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAERQRV+ CLEAA+ERRA EG+ LEL D+ GLL+++TR RE GL + R EIS
Sbjct: 299 PISSEAERQRVILCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRTEIS 358
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKG----NLNTPPKLPQEPARS 415
T + F+VTDA+G+ D K+++S++ +IG L+VK N Q+
Sbjct: 359 TSSEMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMNHKKGDGEEQQTKAV 418
Query: 416 FFFTNFFKGRSFQSFKLIKSCS 437
R+ +F LIKSCS
Sbjct: 419 LVSLGSLVWRNLFNFGLIKSCS 440
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 292/440 (66%), Gaps = 13/440 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C T+I+VDS+N+ GILLEV+Q L D++L+ITKAYI
Sbjct: 28 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 87
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS----SVGVVPSKEY 116
SSDGG+ MDVF+VTD G KI D I YI+ + ++ +++ VGV ++
Sbjct: 88 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 147
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL DL +VV AE+WTHN R A +++V D ++ A++D R
Sbjct: 148 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 207
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC---VNY-- 231
L +++ L NVLR D + + S H +RRLHQMLFADRD+E +Y
Sbjct: 208 LSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEADYPP 267
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ +P +TI C D+ Y+AV++ KDRPKL+FD VC LTDMQYVV+H ++ + A QEY
Sbjct: 268 SFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEY 327
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+H+DG + +E E++RV+ CLEAAI RR SEGL LEL DR GLLS++TR+LRE+GL
Sbjct: 328 FIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGL 387
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
+ RA +ST+G + + F+V DASG PVD K +++++ +IG T++ N+ P +
Sbjct: 388 SVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMML---NVKKEPSSAKT 444
Query: 412 P-ARSFFFTNFFKGRSFQSF 430
P A + T+FF G F+ F
Sbjct: 445 PEASGWAKTSFFFGSLFERF 464
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E + +N R SV + + T I++ ++PG+L EV +LTD+ + A
Sbjct: 27 YFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAY 86
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G I D K + I+K L GD +I +
Sbjct: 87 ISSDGGWFMDVFHVTDQ-QGNKITDGKIIDYIEK----ALGPKGD------TIDGVKTWP 135
Query: 209 GER-RLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
G+R +H + D+TA+ + KDRP LL +
Sbjct: 136 GKRVGVHSV----------------------------GDHTAIELIGKDRPGLLSEISAV 167
Query: 268 LTDMQYVVYHGTVVT 282
L D+ + V V T
Sbjct: 168 LADLHFNVVGAEVWT 182
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 292/440 (66%), Gaps = 13/440 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C T+I+VDS+N+ GILLEV+Q L D++L+ITKAYI
Sbjct: 9 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS----SVGVVPSKEY 116
SSDGG+ MDVF+VTD G KI D I YI+ + ++ +++ VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL DL +VV AE+WTHN R A +++V D ++ A++D R
Sbjct: 129 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 188
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC---VNY-- 231
L +++ L NVLR D + + S H +RRLHQMLFADRD+E +Y
Sbjct: 189 LSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEADYPP 248
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ +P +TI C D+ Y+AV++ KDRPKL+FD VC LTDMQYVV+H ++ + A QEY
Sbjct: 249 SFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEY 308
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+H+DG + +E E++RV+ CLEAAI RR SEGL LEL DR GLLS++TR+LRE+GL
Sbjct: 309 FIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGL 368
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
+ RA +ST+G + + F+V DASG PVD K +++++ +IG T++ N+ P +
Sbjct: 369 SVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMML---NVKKEPSSAKT 425
Query: 412 P-ARSFFFTNFFKGRSFQSF 430
P A + T+FF G F+ F
Sbjct: 426 PEASGWAKTSFFFGSLFERF 445
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E + +N R SV + + T I++ ++PG+L EV +LTD+ + A
Sbjct: 8 YFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G I D K + I+K L GD +I +
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGNKITDGKIIDYIEK----ALGPKGD------TIDGVKTWP 116
Query: 209 GER-RLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
G+R +H + D+TA+ + KDRP LL +
Sbjct: 117 GKRVGVHSV----------------------------GDHTAIELIGKDRPGLLSEISAV 148
Query: 268 LTDMQYVVYHGTVVT 282
L D+ + V V T
Sbjct: 149 LADLHFNVVGAEVWT 163
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 287/440 (65%), Gaps = 13/440 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPPRV +DN C T+I+VDS+N+ GILLEV+Q L DL+ +ITKAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV---ETNASFLNSMRSS-VGVVPSKEY 116
SSDGG+ MD+F+VTD G+KI D TI YI+ + E N L + VGV +Y
Sbjct: 69 SSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDY 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE++AVL +L +V +AE+WTHN R A +++V D ++ ++D R
Sbjct: 129 TAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTR 188
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN---YNS 233
L +++ L N+LR D S + S H +RRLHQM FADRD+E N Y S
Sbjct: 189 LSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEGGGVTNEVEYPS 248
Query: 234 --RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+P +T+ C ++ Y+ V++ KDR KLLFD VC LTDMQYVV+H T+ + A QEY
Sbjct: 249 SFKPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEY 308
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
YI+H+DG + +E E++RV+ CLEAAI RR EGL LEL DR GLLS++TR+LRE GL
Sbjct: 309 YIRHMDGCTLDTEGEKERVIKCLEAAIRRRVCEGLSLELCAKDRVGLLSEVTRVLRENGL 368
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRT-ILQVKGNLNTPPKLPQ 410
+ RA ++T+G + + F+V D+SGNPVD K +++++ +IG T +L VK TP Q
Sbjct: 369 SVTRAGVTTVGEQAMNVFYVRDSSGNPVDMKTIEALRKEIGHTMMLNVK---KTPVSASQ 425
Query: 411 EPARSFFFTNFFKGRSFQSF 430
A+ + T+FF G + F
Sbjct: 426 PEAKGWAKTSFFFGNLLERF 445
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV E T I++ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRT-PSMSISSARVL 207
I + + HV DQ G I D K + I+K L +L+T P + V
Sbjct: 68 ISSDGGWFMDIFHVTDQ-QGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSV- 125
Query: 208 HGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
DYTA+ + +DRP LL +
Sbjct: 126 -------------------------------------GDYTAIELIGRDRPGLLSEITAV 148
Query: 268 LTDMQYVVYHGTVVT 282
L ++ + V V T
Sbjct: 149 LANLHFNVAAAEVWT 163
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/454 (46%), Positives = 291/454 (64%), Gaps = 39/454 (8%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT+++VDS R+GILLE +Q L DLNL I KAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD+NG K+ DQ+ + YI+ ++ET N + T++ELT
Sbjct: 68 DGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGEN--------IEVNGLTALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
GTDR GLLSE+ AVL+DL+C VV A++WTHN R A+++++KD SG I D R+ KI+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEG 179
Query: 183 LLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH----- 236
L NVL + D+ + + + ++ ++H ERRLHQ++F DRD+ER S+ H
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYER------RSKKHERSPM 233
Query: 237 --VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
VT+ + ++R Y+ V + +DR KLLFD VC LTDM+Y V+H T+ T +A+ E+YI+
Sbjct: 234 VVVTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIR 293
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H DG PISSEAERQRV+ CLEAA+ERRA EG+ LEL D+ GLL+++TR RE GL +
Sbjct: 294 HKDGSPISSEAERQRVIQCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVT 353
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK-----------GNLN 403
R EIST + F+VTDA+G+ D K+++S++ +IG L+VK G
Sbjct: 354 RTEISTSSDMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMYHKKGDGEEQ 413
Query: 404 TPPKLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
K S + N F +F LIKSCS
Sbjct: 414 QQTKAVLVSLGSLVWRNLF------NFGLIKSCS 441
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/446 (47%), Positives = 287/446 (64%), Gaps = 31/446 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQ-----VDSVNRHGILLEVIQFLVDLNLVI 55
D E+ L R++PP VVIDN C AT+I+ VDS N+HGILLEV+Q L DL+L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 TKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLNSM 104
+KAYISSDGG+ MDVF+VTD G K+ D+ I YI+ T V+T S+
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSL 122
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
RS+ E T+IEL G DRPGLLS++S VL D+ C+VV+AE+WTHN R A +++V D
Sbjct: 123 RSNT------EQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTD 176
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE 224
+ +G IED+K+L IK L L+ + + I A VLH ERRLHQ++ AD
Sbjct: 177 EVTGGPIEDEKKLAVIKARLSQALQGDESGKGSKTDIPMA-VLHTERRLHQIMSADFAAI 235
Query: 225 RLDCVNY------NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHG 278
+ + N +RP +++ +C+++ Y+ V +R KDRPKLLFDTVC LTDM+YVV+H
Sbjct: 236 QPESTNTFVAAADKTRPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHA 295
Query: 279 TVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL 338
+ + AYQEYYI+ +DG + SEAE++ V+ CLEAAIERR G+ LEL T DR GL
Sbjct: 296 AIRSEGSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGL 355
Query: 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
LSD+TRI RE GL + RA++ST G K + F+VTDASGNPVD +IV++ + +IG++ILQV
Sbjct: 356 LSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQV 415
Query: 399 KGNLNTPPKLPQEPARS--FFFTNFF 422
K + P E A F F F
Sbjct: 416 KDLTPSSPNSQHEVASKSRFSFGTFL 441
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 286/446 (64%), Gaps = 31/446 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQ-----VDSVNRHGILLEVIQFLVDLNLVI 55
D E+ L R++PP VVIDN C AT+I+ VDS N+HGILLEV+Q L DL+L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 TKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLNSM 104
+KAYISSDGG+ MDVF+VTD G K+ D+ I YI+ T V+T S+
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSL 122
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
RS+ E T+IEL G DRPGLLS++S VL D+ C+VV+AE+WTHN R A +++V D
Sbjct: 123 RSNT------EQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTD 176
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE 224
+ +G IED+K+L IK L L+ + + I A VLH ERRLHQ++ AD
Sbjct: 177 EVTGGPIEDEKKLAVIKARLSQALQGDESGKGSKTDIPMA-VLHTERRLHQIMSADFAAI 235
Query: 225 RLDCVNY------NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHG 278
+ + N +RP +++ +C+++ Y+ V +R DRPKLLFDTVC LTDM+YVV+H
Sbjct: 236 QPESTNTFVAAADKTRPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHA 295
Query: 279 TVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL 338
+ + AYQEYYI+ +DG + SEAE++ V+ CLEAAIERR G+ LEL T DR GL
Sbjct: 296 AIRSEGSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGL 355
Query: 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
LSD+TRI RE GL + RA++ST G K + F+VTDASGNPVD +IV++ + +IG++ILQV
Sbjct: 356 LSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQV 415
Query: 399 KGNLNTPPKLPQEPARS--FFFTNFF 422
K + P E A F F F
Sbjct: 416 KDLTPSSPNSQHEVASKSRFSFGTFL 441
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/441 (46%), Positives = 288/441 (65%), Gaps = 13/441 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ R+NPPRV +DND C T+I+ DS+N+ GILLEV+Q L DL+ +ITKAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS----SVGVVPSKEY 116
SSDGG+ MDVF+VTD G+KI D TI +I+ T+ ++S VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T IEL G DRPGLLSE+SAVL L +V++AE+WTHN R A +L+V D ++ A++D KR
Sbjct: 129 TVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQ-AMDDSKR 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS--- 233
L I++ L ++LR D + + S + H +RRLHQMLFADRD+E +
Sbjct: 188 LSIIEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGVTTTDVDCP 247
Query: 234 ---RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
RP++ I ++ Y+ V+++ KDR KL+FD VC LTDM+YVV+H T+ + A QE
Sbjct: 248 PCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQE 307
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
Y+I+H+DG + +E E++R + C+EAAI+RR SEG+ LEL DR GLLS++TRILRE G
Sbjct: 308 YFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENG 367
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL-QVKGNLNTPPKLP 409
L + RA +ST+G K + F+V DASGNPVD KI++++ +IG+T++ VK K P
Sbjct: 368 LTVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKAP 427
Query: 410 QEPARSFFFTNFFKGRSFQSF 430
E R + T+FF G + F
Sbjct: 428 VE-TRGWARTSFFFGNLLERF 447
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV + T I+ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
I + + HV DQ G I D K + I+K L
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKITDSKTIDFIEKTL 102
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 285/445 (64%), Gaps = 26/445 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPP V IDN C+ T+++VDS+N+ GILLEV+Q L DL+L ITKAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ D TI YI+ + +AS VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
TSIE+ DRPGLLSEVSAVL DL+ +VV+AE WTHN R A +L+V D ++ A++D +R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LLKIKKLLCNVLR----TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL----DC 228
L +++ L NVLR + S+SI S H +RRLHQM FADRD+E + D
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLSIGST---HVDRRLHQMFFADRDYEAVTKLDDS 245
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
+ P +T+ C ++ Y+ + + +DRPKL+FD VC LTDMQY+V+H T+ + A
Sbjct: 246 ASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHAS 305
Query: 289 QEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILRE 348
QEY+I+H DG + +E E++RV+ CLEAAI RR SEG LEL DR GLLS++TRILRE
Sbjct: 306 QEYFIRHKDGCTLDTEGEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILRE 365
Query: 349 YGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
+GL + RA ++T+G + + F+V DASGNPVD K +++++ +IG +++ + P +
Sbjct: 366 HGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMM-IDFKNKVPSRK 424
Query: 409 PQEPAR----------SFFFTNFFK 423
+E + SFFF N +
Sbjct: 425 WKEEGQAGTGGGWAKTSFFFGNLLE 449
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E +S +N S+ KE T +++ ++PG+L EV VLTDL ++ A
Sbjct: 8 YFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G + D K + I+K+L P S+++
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGNKVTDSKTIDYIEKVL-----------GPKGHASASQ--- 112
Query: 209 GERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCL 268
N+ P + S D+T++ I ++DRP LL + L
Sbjct: 113 -----------------------NTWPGKRVGVHSLGDHTSIEIIARDRPGLLSEVSAVL 149
Query: 269 TDMQ 272
D+
Sbjct: 150 ADLN 153
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/426 (46%), Positives = 283/426 (66%), Gaps = 13/426 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ LI R++PPRV IDND C+ T+++VDS N+HGILLE++Q L DL LVI+K+YI
Sbjct: 9 FDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--ASFLNSMRSSVG--VVP---S 113
SDGG+ MDVF+VTD G K+ D++ I YI+ + N +++ +G + P S
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVS 128
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
E+T+ E+TGTDRPGL+SE+SAVL +LSC V +A WTHN+R A ++ ++D+ G I D
Sbjct: 129 TEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRD 188
Query: 174 QKRLLKIKKLLCNVLRT---NGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DC 228
+RL +++ L NV+ +G+ R ++ A H +RRLHQ++FAD+D+ER C
Sbjct: 189 PERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGC 248
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
+ R V+I +C ++ Y+ V ++S+DRPKLLFDTVC LTDMQYVV+H V + A
Sbjct: 249 DGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAV 308
Query: 289 QEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILRE 348
QEY+I+ +DG + +++ER RV CL AAIERR + GL L++ +R GLLSDITR+ RE
Sbjct: 309 QEYFIRQMDGCTLGTQSERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRE 368
Query: 349 YGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
GL IR AEI G + +F+VTD SG V P V+ I+ +IG TI+ V + + PP L
Sbjct: 369 NGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKS-SVPPSL 427
Query: 409 PQEPAR 414
P P+R
Sbjct: 428 PASPSR 433
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 284/445 (63%), Gaps = 26/445 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPP V IDN C+ T+++VDS+N+ GILLEV+Q L DL+L ITKAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ D TI YI+ + +AS VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
TSIE+ DRPGLLSEVSAVL DL+ +VV+AE WTHN R A +L+V D ++ A++D +R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LLKIKKLLCNVLR----TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL----DC 228
L +++ L NVLR + S+SI S H +RRLHQM FADRD+E + D
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLSIGST---HVDRRLHQMFFADRDYEAVTKLDDS 245
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
+ P +T+ C ++ Y+ + + +DRPKL+FD VC LTDMQY+V+H T+ + A
Sbjct: 246 ASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHAS 305
Query: 289 QEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILRE 348
QEY+I+H DG + +E E++R + CLEAAI RR SEG LEL DR GLLS++TRILRE
Sbjct: 306 QEYFIRHKDGCTLDTEGEKERXVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILRE 365
Query: 349 YGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
+GL + RA ++T+G + + F+V DASGNPVD K +++++ +IG +++ + P +
Sbjct: 366 HGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMM-IDFKNKVPSRK 424
Query: 409 PQEPAR----------SFFFTNFFK 423
+E + SFFF N +
Sbjct: 425 WKEEGQAGTGGGWAKTSFFFGNLLE 449
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E +S +N S+ KE T +++ ++PG+L EV VLTDL ++ A
Sbjct: 8 YFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G + D K + I+K+L P S+++
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGNKVTDSKTIDYIEKVL-----------GPKGHASASQ--- 112
Query: 209 GERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCL 268
N+ P + S D+T++ I ++DRP LL + L
Sbjct: 113 -----------------------NTWPGKRVGVHSLGDHTSIEIIARDRPGLLSEVSAVL 149
Query: 269 TDMQ 272
D+
Sbjct: 150 ADLN 153
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 285/439 (64%), Gaps = 13/439 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ RMNPPRV +DN C T+I+VDSVN+ GILLEV+Q L DL+ +ITKAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G+KI D TI +I+ + ++ N VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL +L +V +AE+WTHN R A +L+V D ++ A+++ R
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQ-AVDEANR 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY----- 231
L +++ L N+LR + S S H +RRLHQMLFADRD+E
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFSMGST-HMDRRLHQMLFADRDYESYAVAREVDSPP 246
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ RP +TI C ++ Y+ V+++ KDR KL+FD VC LTDMQYVV+H TV + A QEY
Sbjct: 247 SLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEY 306
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+H+DG + ++ E++RV+ C+EAAI RR SEG+ LEL DR GLLS++TRILRE GL
Sbjct: 307 FIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGL 366
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
+ RA +ST G + + F+V DASGNPVD K +++++ +IG+T++ + + K P+
Sbjct: 367 TVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPE- 425
Query: 412 PARSFFFTNFFKGRSFQSF 430
R + T+FF G + F
Sbjct: 426 -TRGWAKTSFFFGNLLERF 443
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 72/195 (36%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R S+ + T I++ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC-NVLRTNGDLRTPSMSISSARVL 207
I + + HV DQ G I D K + I+K L T G PS + V
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSV- 125
Query: 208 HGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
D+TA+ + +DRP LL +
Sbjct: 126 -------------------------------------GDHTAIELIGRDRPGLLSEISAV 148
Query: 268 LTDMQYVVYHGTVVT 282
L ++ + V+ V T
Sbjct: 149 LANLHFNVFAAEVWT 163
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 283/439 (64%), Gaps = 13/439 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ RMNPPRV +DN C T+I++DSVN+ GILLEV+Q L DL+ VITKAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G+KI D TI I+ + ++ N VGV +Y
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDY 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL +L +V +AE+WTHN R A +L+V D ++ A +D KR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQVA-DDPKR 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY----- 231
L +++ L N+LR + S S H +RRLHQMLFADRD+E
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFSMGST-HMDRRLHQMLFADRDYESYAVAREVDSPP 246
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ RP +TI C ++ Y+ V+++ KDR KL+FD VC LTDMQYVV+H TV + A QEY
Sbjct: 247 SLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEY 306
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+H+DG + ++ E++RV+ C+EAAI RR SEG+ LEL DR GLLS++TRILRE GL
Sbjct: 307 FIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGL 366
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
+ RA +ST G + + F+V DASGNPVD K ++++ +IG+T++ + + K P+
Sbjct: 367 SVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVPSNTKAPE- 425
Query: 412 PARSFFFTNFFKGRSFQSF 430
R + T+FF G + F
Sbjct: 426 -TRGWAKTSFFFGNLLERF 443
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 38/194 (19%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV + T I++ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G I D K + I+K L ++ ++
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKITDSKTIDLIEKALGPKSKSTEGVK------------- 113
Query: 209 GERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCL 268
N+ S+ HV + DYTA+ + +DRP LL + L
Sbjct: 114 ---------------------NWPSK-HVGVHSVG--DYTAIELIGRDRPGLLSEISAVL 149
Query: 269 TDMQYVVYHGTVVT 282
++ + V+ V T
Sbjct: 150 ANLHFNVFAAEVWT 163
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/438 (46%), Positives = 286/438 (65%), Gaps = 17/438 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ R+NPPRV +DND C T+I+ DS+N+ GILLEV+Q L DL+ +ITKAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMR----SSVGVVPSKEY 116
SSDGG+ MDVF+VTD G+KI D TI +I+ T+ + VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IEL G DRPGLLSE+SAVL L +V++AE+WTHN R A +L+V D ++ A++D KR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQ-AMDDSKR 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL-------DCV 229
L +++ L ++LR D + + + H +RRLHQMLFADRD+E + DC
Sbjct: 188 LSIMEEQLNHILRGCEDDEKVARTSFTMGFTHMDRRLHQMLFADRDYESVGLTTTDVDCP 247
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ RP + I ++ Y+ V++R KDR KL+FD VC LTDM+YVV+H T+ + A Q
Sbjct: 248 P-SFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQ 306
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
EY+I+H+DG + +E E++RV+ C+EAAI+RR SEG+ LEL DR GLLS++TRILRE
Sbjct: 307 EYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILREN 366
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL----QVKGNLNTP 405
GL + RA +ST+G K + F+V DASGNPVD KI++++ +IG+ ++ +V G + P
Sbjct: 367 GLRVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQIMMVNVKRVPGYVKAP 426
Query: 406 PKLPQEPARSFFFTNFFK 423
+ SFFF N +
Sbjct: 427 AETRGWAKTSFFFGNLLE 444
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 40/195 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N R SV + T I+ ++PG+L EV +LTDL + A
Sbjct: 8 YFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G I D K + I+K L S
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGKKITDSKTIDFIEKT----------LGPKGQSTEGVNCWQ 116
Query: 209 GER-RLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
G+R +H + D+TA+ + +DRP LL +
Sbjct: 117 GKRVGVHSI----------------------------GDHTAIELIGRDRPGLLSEISAV 148
Query: 268 LTDMQYVVYHGTVVT 282
L +Q+ V V T
Sbjct: 149 LASLQFNVIAAEVWT 163
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/461 (46%), Positives = 287/461 (62%), Gaps = 31/461 (6%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DEF KL+ RMNPPRV +DN AT+++VDS N++G LLEV+Q L +L L I +AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYISS 71
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLNSMRSSVGVVPSKE--YTSI 119
DG + MDVF+V D +G K+ D I I+ ++ + SF SV V T+I
Sbjct: 72 DGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAI 131
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
EL G DRPGLLSEV AVLTDL C++VS+E+WTH+AR AAL+HV D + AI+DQ RL
Sbjct: 132 ELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDT 191
Query: 180 IKKLLCNVLRTNG------------DLRTPSMSISSARVLHGERRLHQMLFADR------ 221
+K+LL ++LR G D+ P ++A H RRLHQM+ DR
Sbjct: 192 VKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAA---HAPRRLHQMMHDDRAAAAPQ 248
Query: 222 DFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVV 281
RP V ++DC++R YT V +R +DRPKLLFDTVC LTDMQYVV+HGTV+
Sbjct: 249 PSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVI 308
Query: 282 TGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSD 341
EAYQEYYI+H+D P++S ER R+ CLEAAI+RR +EGL LEL +DR GLLSD
Sbjct: 309 AEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELCCEDRVGLLSD 368
Query: 342 ITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGN 401
+TRI RE+GL + AE++T G + + F+V ASG PV+ V++++ +IG +L V+ +
Sbjct: 369 VTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVRED 428
Query: 402 L--NTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
P P RS N + RS + LI+SCS
Sbjct: 429 AGGGEPRSPPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 467
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/459 (46%), Positives = 282/459 (61%), Gaps = 24/459 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMNPPRV +DND AT+++VDSVN++G LLEV+Q L DL L I +AYISS
Sbjct: 18 DEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYISS 77
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLNSMR--SSVGVVPSKEYTSI 119
DG + MDVF+V D +G K+ D I I+ ++ + SF +V + T+I
Sbjct: 78 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 137
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
EL G DRPGLLSEV AVLTDL C++V++E+WTH+ R AAL++V D + AIED RL
Sbjct: 138 ELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDT 197
Query: 180 IKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVNYNSR--- 234
+K+LL +VLR + + S + S V H RRLHQM+ ADR R D R
Sbjct: 198 VKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVGERGEA 257
Query: 235 -------PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA 287
P V + DC++R YT V +R +DRPKLLFDTVC LTDMQYVV+HGTV+ EA
Sbjct: 258 SGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEA 317
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILR 347
YQEYYI+H+D S +R R+ CLEAAI+RR +EGL LEL +DR GLLSD+TRI R
Sbjct: 318 YQEYYIRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRIFR 377
Query: 348 EYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLN---- 403
E+GL + AE+ T G + + F+V DASG PV VD+++ +IG L V+ +
Sbjct: 378 EHGLSVTHAEVDTRGAQAANVFYVVDASGEPVQGHAVDAVRAEIGEQFLFVREQHDAAAG 437
Query: 404 --TPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
PK P N + RS + LI+SCS
Sbjct: 438 AGAGPKSPVGGGGRRSLGNMIRSRSEKFLYNLGLIRSCS 476
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 283/446 (63%), Gaps = 11/446 (2%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DEF KL+ MNPPRV +DN AT+++VDS N++G LLEV+Q L DL L I +AYISS
Sbjct: 13 DEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYISS 72
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKE--YTSIE 120
DG + MDVF+V D G K+ D I I+ ++ + VGV E T IE
Sbjct: 73 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRCVGVEAEAEAAQTVIE 132
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G DRPGLLSEV AVLT+L C++ ++E+WTH+ R AAL++V D +G +IE+ +RL +
Sbjct: 133 LIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDTV 192
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVL--HGERRLHQMLFADRDFERLDCVNY----NSR 234
K+LL +VLR + + + + SAR H +RRLHQM+ ADR R D + S
Sbjct: 193 KRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVADDRSL 252
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + DC++R YT V +R +DRPKLLFDTVC LTDMQY+V+HGTV+ EAYQEYYI+
Sbjct: 253 PVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQEYYIR 312
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
H+D +S+ +R+++ CLEAAI+RR +EGL LEL +DR GLLSD+TRI RE+GL +
Sbjct: 313 HLDDGAAASDEDREQLRRCLEAAIQRRNTEGLGLELCCEDRVGLLSDVTRIFREHGLSVT 372
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
AE++T G + + F+V ASG PV + V++++ +IG IL VK + P
Sbjct: 373 HAEVATRGERAANVFYVVTASGMPVQAQAVEAVRAEIGDEILLVKEDAAAPKSPLGRDGG 432
Query: 415 SFFFTNFFKGRS---FQSFKLIKSCS 437
N + RS + LI+SCS
Sbjct: 433 GRSLGNMIRSRSEKFLYNLGLIRSCS 458
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 289/466 (62%), Gaps = 33/466 (7%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQ--------VDSVNRHGILLEVIQFLVDLNLV 54
DEF KL+ RMNPPRV +DN AT+++ VDS N++G LLEV+Q L +L L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 ITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLNSMRSSVGVVPS 113
I +AYISSDG + MDVF+V D +G K+ D I I+ ++ + SF SV V
Sbjct: 72 IKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAE 131
Query: 114 KEY--TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
T+IEL G DRPGLLSEV AVLTDL C++VS+E+WTH+AR AAL+HV D + AI
Sbjct: 132 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAI 191
Query: 172 EDQKRLLKIKKLLCNVLRTNG----DLR-TPSMSISSAR----VLHGERRLHQMLFADR- 221
+DQ RL +K+LL ++LR G D + T +I + R H RRLHQM+ DR
Sbjct: 192 DDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRA 251
Query: 222 -----DFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
RP V ++DC++R YT V +R +DRPKLLFDTVC LTDMQYVV+
Sbjct: 252 AAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVF 311
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRF 336
HGTV+ EAYQEYYI+H+D P++S ER R+ CLEAAI+RR +EGL LELY +DR
Sbjct: 312 HGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCEDRV 371
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
GLLSD+TRI RE+GL + AE++T G + + F+V ASG PV+ V++++ +IG +L
Sbjct: 372 GLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVL 431
Query: 397 QVKGNL--NTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
V+ + P P RS N + RS + LI+SCS
Sbjct: 432 FVREDAGGGEPRSPPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 475
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/447 (45%), Positives = 288/447 (64%), Gaps = 31/447 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L R+NPP V IDN C+ T+++VDS+N+ GILLEV+Q L DL+L ITKAYI
Sbjct: 9 FDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ D TI YI+ + +AS VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
TSIE+ DRPGLLSEVSA+L DL+ +VV+AE WTHN R A +L+V D ++ A++D +R
Sbjct: 129 TSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LLKIKKLLCNVLR----TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE---RLDCV 229
L +++ L NVLR + S+SI S H +RRLHQM FAD+D+E +LD
Sbjct: 189 LSAMEEQLNNVLRGCEQEDEKFARTSLSIGST---HVDRRLHQMFFADKDYEAVTKLD-- 243
Query: 230 NYNSR---PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
++ SR P +T+ C ++ Y+ + + +DRPKL+FD VC LTDMQY+V+H T+ +
Sbjct: 244 DFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRIL 346
A QEY+I+H DG + + E++RV+ CLEAAI RR SEG LEL DR GLLS++TRIL
Sbjct: 304 ASQEYFIRHKDGCTLDT-GEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRIL 362
Query: 347 REYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPP 406
RE+GL + RA ++T+G + + F+V DASGNPVD K +++++ +IG +++ + P
Sbjct: 363 REHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMM-IDFKNKVPS 421
Query: 407 KLPQEPARS----------FFFTNFFK 423
+ +E ++ FFF N +
Sbjct: 422 RKGKEEGQAGTGGGWAKTTFFFGNLLE 448
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y E ++ +N S+ KE T +++ ++PG+L EV VLTDL ++ A
Sbjct: 8 YFDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAY 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLH 208
I + + HV DQ G + D K + I+K+L P S+++
Sbjct: 68 ISSDGGWFMDVFHVTDQ-QGNKVTDSKTIDYIEKVL-----------GPKGHASASQ--- 112
Query: 209 GERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCL 268
N+ P + S D+T++ I ++DRP LL + L
Sbjct: 113 -----------------------NTWPGKRVGVHSLGDHTSIEIIARDRPGLLSEVSAIL 149
Query: 269 TDMQ 272
D+
Sbjct: 150 ADLN 153
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 270/423 (63%), Gaps = 60/423 (14%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KLIRRMNPPRVVIDN+ C++A+VI+VDS N+HGILLEV+Q L+DLNL+ITKAYI
Sbjct: 7 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G KI D+ + YI+ ++ ++A F++SMR SVGV+PS ++TSIE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 126
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTG+DRPGLLSEV +A L H+K
Sbjct: 127 LTGSDRPGLLSEV----------------------SAVLTHLK----------------- 147
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTIL 240
C+V+ N ++ T + +A V+H + A D ERL V + +L
Sbjct: 148 ----CSVV--NAEVWT--HNTRAAAVMHVTD--EETGCAITDPERLSKVK---QLLCNVL 194
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
S++ S++ LLFDTVC LTDMQYVV+H V EAYQEYYI+H+DG P
Sbjct: 195 KGSNK--------SREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSP 246
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
+ S+AERQRV+ CLEAAIERR SEGL+LEL T DR GLLSD+TRI RE L + RAE++T
Sbjct: 247 VKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTT 306
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTN 420
K +TF V DASG PVD K +DSI+ IG+TILQVKG+ ++PQE F
Sbjct: 307 RAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLVG 366
Query: 421 FFK 423
F+
Sbjct: 367 LFR 369
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 284/450 (63%), Gaps = 27/450 (6%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D +F L R+N P RV IDN+ E T+++VDS+N+ G+LLEV+Q L DLNL I+K+
Sbjct: 9 FDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTDLNLSISKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP------ 112
YIS D G+ MDVF+V D N K+ DQ I+ I+ + T NS ++ V
Sbjct: 69 YISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDN 128
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S E+T+IE+TGTDRPGL SE+SA L DL C+VV A W+HNAR A + ++ DQS+ IE
Sbjct: 129 SGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIE 188
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMS--------ISSARVLHGERRLHQMLFADRDFE 224
D RL I++ L VLR S + IS+ + ERRLHQ+L + +D++
Sbjct: 189 DPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYD 248
Query: 225 RLDCVNYNSRPH---------VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVV 275
+ + RP V+I C + Y+ V+I KDRP+L+FDTVC LTDMQYV+
Sbjct: 249 -WTSESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCTLTDMQYVI 307
Query: 276 YHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDR 335
+H ++ + + A+QEY+I+HV+G+ ++S+ ++ RV+ CLEAAIERR EG+ LEL ++R
Sbjct: 308 FHASISSKKDNAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCEGVRLELCANNR 367
Query: 336 FGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTI 395
GLLSDITR+LRE GL + RA+I+T G K + F+V D SG VD ++V+S++ +IG +
Sbjct: 368 VGLLSDITRVLRENGLNVVRADIATQGEKAINAFYVKDISGKEVDMEMVESVKKEIGPVV 427
Query: 396 LQVKGNLNTPPKLPQEPARSFFFTNFFKGR 425
L+VK N +PP PQ F F++ K +
Sbjct: 428 LRVK-NETSPPSTPQITRSRFSFSDMLKSQ 456
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 289/489 (59%), Gaps = 56/489 (11%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVI-------------------------------Q 31
DEF KL+ RMNPPRV +DN AT++ +
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTGE 71
Query: 32 VDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
VDS N++G LLEV+Q L +L L I +AYISSDG + MDVF+V D +G K+ D I I+
Sbjct: 72 VDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIE 131
Query: 92 TTVETNA-SFLNSMRSSVGVVPSKEY--TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
++ + SF SV V T+IEL G DRPGLLSEV AVLTDL C++VS+E
Sbjct: 132 LSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 191
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG----DLR-TPSMSISS 203
+WTH+AR AAL+HV D + AI+DQ RL +K+LL ++LR G D + T +I +
Sbjct: 192 VWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPA 251
Query: 204 AR----VLHGERRLHQMLFADR------DFERLDCVNYNSRPHVTILDCSDRDYTAVTIR 253
R H RRLHQM+ DR RP V ++DC++R YT V +R
Sbjct: 252 PRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVR 311
Query: 254 SKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMAC 313
+DRPKLLFDTVC LTDMQYVV+HGTV+ EAYQEYYI+H+D P++S ER R+ C
Sbjct: 312 CRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRC 371
Query: 314 LEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
LEAAI+RR +EGL LELY +DR GLLSD+TRI RE+GL + AE++T G + + F+V
Sbjct: 372 LEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVA 431
Query: 374 ASGNPVDPKIVDSIQHQIGRTILQVKGNL--NTPPKLPQEPARSFFFTNFFKGRS---FQ 428
ASG PV+ V++++ +IG +L V+ + P P RS N + RS
Sbjct: 432 ASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRSPPGRDRRS--LGNMIRSRSEKFLY 489
Query: 429 SFKLIKSCS 437
+ LI+SCS
Sbjct: 490 NLGLIRSCS 498
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/462 (46%), Positives = 287/462 (62%), Gaps = 30/462 (6%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMNPPRV +DND AT+++VDS N++G LLEV+Q L DL L I +AYISS
Sbjct: 15 DEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLNSMR--SSVGVVPSKEYTSI 119
DG + MDVF+V D +G K+ D I I+ ++ + SF +V + T+I
Sbjct: 75 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 134
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
EL G DRPGLLSEV AVL DL C+VV++E+WTH+ R AAL+HV D + AI+D RL
Sbjct: 135 ELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDT 194
Query: 180 IKKLLCNVLR-TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV--------- 229
+K+LL +VLR ++ D + ++SSARV H RRLHQM+ ADR R
Sbjct: 195 VKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDGEEERE 254
Query: 230 ------NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG 283
N N P V + DC++R YT V +R +DRPKLLFDTVC LTDMQYVV+HGTV+
Sbjct: 255 RGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAE 314
Query: 284 RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDIT 343
EAYQEYYI+H+D SS +R R+ LEAAI+RR +EGL LEL +DR GLLSD+T
Sbjct: 315 GSEAYQEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTEGLRLELCCEDRVGLLSDVT 371
Query: 344 RILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK-IVDSIQHQIGRTIL----QV 398
RI RE+GL + AE+ T G + + F+V DASG PV + VD+++ +IG +L +
Sbjct: 372 RIFREHGLSVTHAEVETRGARAANVFYVVDASGEPVQAQAAVDAVRAEIGEQVLLLVREQ 431
Query: 399 KGNLNTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
+ + PK P N + RS + LI+SCS
Sbjct: 432 QQDAAGGPKSPAGAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 473
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 270/399 (67%), Gaps = 12/399 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+E+ KL+ RMN PRVVIDN VC ++TV+++DS GILLE +Q L D+NL I KAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+V+D+NG K+ D+ I YI+ ++ET S G+ T++ELT
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE-DQKRLLKIK 181
GTDR GLLSEV AVL DL C VV A+ WTHN R A++++VKD +SG I+ D R+ +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 KLLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTIL 240
L N+L+ + + + + +S H ERRLHQ +F DRD+E+ + P V++
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKK--FDIEKSPIVSVQ 237
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+ R Y+ V ++ KDR KLLFD VC LTDM Y+V+H + T A+ E+Y++H DG P
Sbjct: 238 NLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSDGHP 297
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
+SSE ERQR++ CL+AAIERR +G+ LEL T DR GLL+++TRILRE GL I RAEIST
Sbjct: 298 VSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAEIST 357
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
++ F+VTDA+GN +DP+I+ SI+ +IG L VK
Sbjct: 358 KDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 270/399 (67%), Gaps = 12/399 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+E+ KL+ RMN PRVVIDN VC ++TV+++DS GILLE +Q L D+NL I KAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+V+D+NG K+ D+ I YI+ ++ET S G+ T++ELT
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE-DQKRLLKIK 181
GTDR GLLSEV AVL DL C VV A+ WTHN R A++++VKD +SG I+ D R+ +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 KLLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTIL 240
L N+L+ + + + + +S H ERRLHQ +F DRD+E+ + P V++
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKK--FDIEKSPIVSVQ 237
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+ R Y+ V ++ KDR KLLFD VC LTDM Y+V+H + T A+ E+Y++H DG P
Sbjct: 238 NLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSDGHP 297
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
+SSE ERQR++ CL+AAIERR +G+ LEL T DR GLL+++TRILRE GL I RAEIST
Sbjct: 298 VSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAEIST 357
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
++ F+VTDA+GN +DP+I+ SI+ +IG L VK
Sbjct: 358 KDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/399 (48%), Positives = 270/399 (67%), Gaps = 12/399 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+E+ KL+ RMN PRVVIDN VC ++TV+++DS GILLE +Q L D+NL I KAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+V+D+NG K+ D+ I YI+ ++ET S G+ T++ELT
Sbjct: 68 DGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE-DQKRLLKIK 181
GTDR GLLSEV AVL DL C VV A+ WTHN R A++++VKD +SG I+ D R+ +++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 KLLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTIL 240
L N+L+ + + + + +S H ERRLHQ +F DRD+E+ + P V++
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKK--FDIEKSPIVSVQ 237
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
+ R Y+ V ++ KDR KLLFD VC LTDM Y+V+H + T A+ E+Y++H DG P
Sbjct: 238 NLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSDGHP 297
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
+SSE ERQR++ CL+AAIERR +G+ LEL T DR GLL+++TR+LRE GL I RAEIST
Sbjct: 298 VSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLNIARAEIST 357
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
++ F+VTDA+GN +DP+I+ SI+ +IG L VK
Sbjct: 358 KDGVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVK 396
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/427 (44%), Positives = 280/427 (65%), Gaps = 18/427 (4%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D EF LI R+ PPRV IDN+ C+ TV++VDS N+HGILLE++Q L DL+LVI+K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--ASFLNSMRSSVG--VVP---S 113
SDGG+ MDVF+VTD G K+ D++ I YI+ + TN A +++ + V P S
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVS 128
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
++T++E+TG DRPG+LSE+SAVL +L C V +A WTHN+RAA +++++D SG I D
Sbjct: 129 TDHTAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITD 188
Query: 174 QKRLLKIKKLLCNVLRTN---GDLRTPSMSISSARVLHGERRLHQMLFADRDFERL-DCV 229
+L +++ L NV+ + G++R+ ++ H ERRLHQ++ A D+E C
Sbjct: 189 SNKLAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYEPCCGCT 248
Query: 230 NYNS-------RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
+ ++ + HV+I C ++ Y+ V +RS DRPKLLFDT+C LTDMQYVV+H V +
Sbjct: 249 DGDAAHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSS 308
Query: 283 GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDI 342
A QEY+I+H DG + +E+ER ++ CL AA ERRAS GL L++ T +R GLLSD+
Sbjct: 309 KGTMARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLLSDV 368
Query: 343 TRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNL 402
TR+ RE GL I RAEI G + +F++TDASG+ + ++ ++ +IG ++L V +
Sbjct: 369 TRVFRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVNKSP 428
Query: 403 NTPPKLP 409
P+ P
Sbjct: 429 GWTPRTP 435
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 208/464 (44%), Positives = 286/464 (61%), Gaps = 36/464 (7%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L +NPPRVVI+N ATVI++DSVNRHGILLEV+Q L DL+L I+KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSD G+ MDVF+VTDI+G KI D+ + +I+ + R S+G P ++T+IE
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEGGEIT--RVSLGTGP-HQHTAIE 129
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ-SSGCAIEDQKRLLK 179
L+G +RPGLLSEV + L+ ++C+V SA +WTHN R A ++ V + SSG IED +L
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IKKLLCNVLRTNGDLRTPSMSISS---ARVLHGERRLHQMLFADRDFE--------RLD- 227
IK LC V+R N R ++ + + H ERRLHQM+ AD D RL
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 228 -----CVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
VN RP VT+ +C +R Y+ V I +DR KLLFDTVC LTDM Y+++H T+++
Sbjct: 250 ETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILS 309
Query: 283 GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDI 342
AYQE+YI+H DG + ++ ERQR++ L AAI+RR EGL LEL T DR GLLSD+
Sbjct: 310 EGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLRLELCTYDRVGLLSDV 369
Query: 343 TRILREYGLCIRRAEISTM-GRKVKDTFFVTD-ASGNPVDPKIVDSIQHQIGRTILQVKG 400
T++ +GLC+ RA +ST V +TF+VTD ASG+ VD + V++I+ ++G+ +L V+
Sbjct: 370 TKVFHRHGLCVTRAHVSTTRAGTVANTFYVTDAASGDAVDMRTVEAIREELGQAMLNVR- 428
Query: 401 NLNTPPKLPQ------EPARSFFFTNFFK---GRSFQSFKLIKS 435
+ P PQ P+ F FFK R S LI S
Sbjct: 429 ---SAPVCPQLLGLDDSPSPRFSLAAFFKLHSERILYSLGLITS 469
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/483 (43%), Positives = 293/483 (60%), Gaps = 53/483 (10%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ L +NPPRVVI+N ATVI++DSVNRHGILLEV+Q L DL+L I+KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM---------------- 104
SSD G+ MDVF+VTDI+G KI D+ + +I+ ++E A+ + +
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGG 132
Query: 105 ---RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
R S+G P ++T+IEL+G +RPGLLSEV + L+ ++C+V SA +WTHN R A ++
Sbjct: 133 EITRVSLGTGP-HQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIF 191
Query: 162 VKDQ-SSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS---ARVLHGERRLHQML 217
V + SSG IED +L IK LC V+R N R ++ + + H ERRLHQM+
Sbjct: 192 VDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMM 251
Query: 218 FAD-------RDFERLDC-------VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFD 263
AD R+ E C VN RP VTI +C +R Y+ V I +DR KLLFD
Sbjct: 252 SADEDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFD 311
Query: 264 TVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRAS 323
TVC LTDM Y+++H T+++ AYQE+YI+H DG + ++ ERQR++ L AAI+RR
Sbjct: 312 TVCTLTDMDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRRFP 371
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM-GRKVKDTFFVTD-ASGNPVDP 381
EGL LEL T DR GLLSD+T++ +GLC+ RA IST V +TF+VTD ASG+ VD
Sbjct: 372 EGLRLELCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAVDM 431
Query: 382 KIVDSIQHQIGRTILQVKGNLNTPPKLPQ------EPARSFFFTNFFK---GRSFQSFKL 432
+ V++I+ ++G+ +L N+ + P PQ P+ F FFK R S L
Sbjct: 432 RTVEAIREELGQAML----NVRSAPVCPQLLGLDDSPSPRFSLAAFFKLHSERILYSLGL 487
Query: 433 IKS 435
I S
Sbjct: 488 ITS 490
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 212/466 (45%), Positives = 300/466 (64%), Gaps = 35/466 (7%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+AKL+R MNPPRV IDN++ + T IQVDSVN HG LL ++Q + DLNLV+ KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMR-SSVGVVPSK------E 115
DG + MDVFYVTD +G+K+ D+AT++YI+TT+E++ + R +S +VPS+ +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE-DQ 174
Y+SIELTGTDRPGLLSEV AVL+D+ C+VVSA++WT N R AA++ V D ++G AI D
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 KRLLKIKKLLCNVLRTNGDLR-TPSMSIS---SARVLHGERRLHQMLFADRDFERLDCVN 230
R+ +I + L ++LR+ T + S++ S +H ERRLHQ++ AD + ++
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDG 247
Query: 231 YNSRPH--------VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
+P V + DC+ R YT V +R +D PKLLFDTVC +TD QYVVYHG V T
Sbjct: 248 AYLQPAPGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVST 307
Query: 283 --GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLS 340
+ AYQEYY+++ G ++E ER + LEAA+ERR ++G+ELE+ + DR GLLS
Sbjct: 308 EPDGVTAYQEYYVRNKAGLA-ATEPERLLLKRQLEAAVERRFADGIELEVRSGDRAGLLS 366
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG--NPVDPKIVDSIQHQIGRTILQV 398
D+TRI+RE GL I RA + + G + DTF+V+D G PV+P+ +D+I+ QIG L+V
Sbjct: 367 DVTRIIRENGLTILRAGVKSQGGEAVDTFYVSDPMGLDYPVEPRTIDTIRAQIGEATLRV 426
Query: 399 KGN---------LNTPPKLPQEPARSFFFTNFFK-GRSFQSFKLIK 434
K N A +F + +K R FQS L+K
Sbjct: 427 KKNPFADADQQQQQHDAAASVVGAIAFILGSVYKFYRPFQSLALVK 472
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 276/437 (63%), Gaps = 29/437 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D EF LI R+ PPRV IDN+ + T+++ DS N+HGILLE++Q L DL+LVI+K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP-------- 112
SSDGG+ MDVF+VTD G K+ D++ I YI+ A N R +P
Sbjct: 69 SSDGGWFMDVFHVTDQLGNKLTDESLILYIQ-----QALCANRRRGVSKELPTCLNREVR 123
Query: 113 ----SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
S E+T++E+ GTDRPGLLSE+SAVL +L C V +A WTHN RAA++++++D G
Sbjct: 124 PRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRG 183
Query: 169 CAIEDQKRLLKIKKLLCNVLRTN---GDLRTPSMSISS-ARVLHGERRLHQMLFADRDFE 224
I D KRL +++ L NV+ G+ R+ ++ + + H ERRLHQ+++A+ D+E
Sbjct: 184 GPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYE 243
Query: 225 RLDCVNYN--------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
N ++ HV I C ++ Y+ V +RS+DRPKLLFDT+C LTDMQYVV+
Sbjct: 244 PCQGCNGGGAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVF 303
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRF 336
H V + A QEY+I+ DG + +++ER ++ CL AAIERR S GL L++ T +R
Sbjct: 304 HAVVSSKGTMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTHNRM 363
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
GLLSD+TR RE GL I AEI T G + +F+VTDASG +P++++ ++ +IG +I+
Sbjct: 364 GLLSDLTRAFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGSIV 423
Query: 397 QVKGNLNTPPKLPQEPA 413
V + PK + P+
Sbjct: 424 VVNKSPGWTPKTSKTPS 440
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 270/408 (66%), Gaps = 21/408 (5%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQV---------DSVNRHGILLEVIQFLVDLNL 53
+E+ KL+ RMN PRVVIDN VC ++TV++V DS GILLE +Q L D+NL
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNL 67
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPS 113
I KAYISSDG + MDVF+V+D+NG K+ D+ I YI+ ++ET S G+
Sbjct: 68 WIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL--- 122
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE- 172
T++ELTGTDR GLLSEV AVL DL C VV A+ WTHN R A++++VKD +SG I+
Sbjct: 123 ---TALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDG 179
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMS-ISSARVLHGERRLHQMLFADRDFERLDCVNY 231
D R+ +++ L N+L+ + + + + +S H ERRLHQ +F DRD+E+ +
Sbjct: 180 DSDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKK--FDI 237
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V++ + R Y+ V ++ KDR KLLFD VC LTDM Y+V+H + T A+ E+
Sbjct: 238 EKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEF 297
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
Y++H DG P+SSE ERQR++ CL+AAIERR +G+ LEL T DR GLL+++TRILRE GL
Sbjct: 298 YVRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGL 357
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
I RAEIST ++ F+VTDA+GN +DP+I+ SI+ +IG L VK
Sbjct: 358 NIARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 405
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 190/416 (45%), Positives = 277/416 (66%), Gaps = 16/416 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D + LI R+ PPRV IDND + T+++VDS N+HGILLE++Q L DL+LVI+K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ D++ I YIK + + + M ++ + S E+
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+ E+TG DRPGLLSE+ AVL +L C+V +A WTH+ +AA+++++++ +G I+D KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LLKIKKLLCNVLRT-NGDLRTPSMSIS--SARVLHGERRLHQMLFADRDFERLDCVNYN- 232
L +++ L NV+ NG T S+ ++ SA H ERRLHQ+++A+ D+E+ C + +
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSK 250
Query: 233 ------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
+R HV I C ++ Y+ + IRS+DRPKLLFDTVC LTD+QYVV+H V +
Sbjct: 251 SCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTV 310
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRIL 346
AYQEY+I+ G + SE+ER+R++ L AAIERR S GL LEL +R GLLSDITR+
Sbjct: 311 AYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVF 370
Query: 347 REYGLCIRRAEISTMGRKVKDTFFVTDASGN--PVDPKIVDSIQHQIGRTILQVKG 400
RE G I ++ T G++ + F+TDASG+ VDP I+D + +IG +I V+G
Sbjct: 371 RENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGSIAVVQG 426
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/416 (45%), Positives = 276/416 (66%), Gaps = 16/416 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D + LI R+ PPRV IDND + T+++VDS N+HGILLE++Q L DL+LVI+K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SSDGG+ MDVF+VTD G K+ D++ I YIK + + + M ++ + S E+
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+ E+TG DRPGLLSE+ AVL +L C++ +A WTH+ +AA+++++++ +G I+D KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LLKIKKLLCNVLRT-NGDLRTPSMSIS--SARVLHGERRLHQMLFADRDFERLDCVNYN- 232
L +++ L NV+ NG T S+ ++ SA H ERRLHQ+++A+ D+E+ C + +
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSK 250
Query: 233 ------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
+R HV I C ++ Y+ + IRS+DRPKLLFDTVC LTD+QYVV+H V +
Sbjct: 251 SCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTV 310
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRIL 346
AYQEY+I+ G + SE ER+R++ L AAIERR S GL LEL +R GLLSDITR+
Sbjct: 311 AYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVF 370
Query: 347 REYGLCIRRAEISTMGRKVKDTFFVTDASGN--PVDPKIVDSIQHQIGRTILQVKG 400
RE G I ++ T G++ + F+TDASG+ VDP I+D + +IG +I V+G
Sbjct: 371 RENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGSIAVVQG 426
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 277/435 (63%), Gaps = 25/435 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D EF L+ R+ PPRV +DN+ + T+I+VDS N+ GILLE++Q L DL+LVI+K+YI
Sbjct: 10 IDAEFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----------ETNASFLNSMRSSVGV 110
SSDGG+ M+VF+VTD G K+ D + I YI+ + E+ S +R
Sbjct: 70 SSDGGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYA- 128
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
S ++T++E+TGTDRPGLLSE+SAVL+ L C V ++ +WTHN RAA++++++D G
Sbjct: 129 --STDHTAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGP 186
Query: 171 IEDQKRLLKIKKLLCNVLRTN---GDLRTPSMSISS-ARVLHGERRLHQMLFADRDFERL 226
I D KRL +++ L NV+ + G+ R+ ++ + + H RRLHQ+++A+ D+E
Sbjct: 187 ITDPKRLAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPC 246
Query: 227 DCVNYN--------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHG 278
N ++ HV+I C ++ Y+ V +RS+DRPKLLFDT+C LTDMQYVV+H
Sbjct: 247 QGCNGGGLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHA 306
Query: 279 TVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL 338
V A QEY+I+ DG + +E+ER ++ CL AAIERR S G L++ T +R GL
Sbjct: 307 AVSAKGTMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGL 366
Query: 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
LS++TR RE GL I RAEI T G + +F+VTDASG +P+ +D ++ ++G +++ V
Sbjct: 367 LSNVTRAFRENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVV 426
Query: 399 KGNLNTPPKLPQEPA 413
+ PK + P+
Sbjct: 427 NKSPGWTPKTSRTPS 441
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/419 (46%), Positives = 272/419 (64%), Gaps = 16/419 (3%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ NPPRV I+N+ E+ATV+QV S NRHGILL V+Q L DL+LVITK+ +
Sbjct: 9 FDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDM 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK---------TTVETNASFLNSMRSSVGVV 111
SDGG+ +DVF+V D +G K+ DQ+ + YI+ T +E +++ L +R S G+
Sbjct: 69 FSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADL--LRRSSGLT 126
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
+ ++T +ELTG DRPGLLSE+SAVLT + C+V +AE+WTHN R A +++ + ++G I
Sbjct: 127 -TADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPI 185
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSA-RVLHGERRLHQMLFADRDFERLDC-V 229
E Q L IK+ L VL+ + D + I A + H ERRLHQ+++ DR DC
Sbjct: 186 ESQSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHGEQDCDR 245
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
N RP + I S+R Y+ V+I+ KDRPKLLFD VC LTDMQYV++H + + E Q
Sbjct: 246 NSQGRPKIQIKK-SERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETTQ 304
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
E++I+H +G + + AE Q + CLEAAI RR +EGL LEL +DR GLLSD+T+I RE
Sbjct: 305 EFFIRHENGCVLDTAAE-QHLKVCLEAAINRRTTEGLRLELCMNDRVGLLSDVTKIFREN 363
Query: 350 GLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
GL + RA+++T K + F+V DASG VD K+V++++ IG ILQVKG P+L
Sbjct: 364 GLSVARADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVKGVPRQEPEL 422
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 39/219 (17%)
Query: 89 YIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
Y ET +S N R ++ + T +++ +R G+L V VLTDL + ++
Sbjct: 8 YFDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSD 67
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPS-MSISSARVL 207
+++ + HV D SG + DQ L I+K+ G P+ + SSA +L
Sbjct: 68 MFSDGGWFLDVFHVVD-DSGNKVRDQSVLDYIQKVC-------GGHSIPTQLEQSSADLL 119
Query: 208 HGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCC 267
RR + A D+T V + DRP LL +
Sbjct: 120 ---RRSSGLTTA--------------------------DHTVVELTGPDRPGLLSEISAV 150
Query: 268 LTDMQYVVYHGTVVTGRME-AYQEYYIKHVDGFPISSEA 305
LT M+ V V T A Y+ G PI S++
Sbjct: 151 LTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIESQS 189
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/418 (44%), Positives = 271/418 (64%), Gaps = 24/418 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E LI R++PPRV I+ND C TV++VDS NR GILLE++Q L DL+L+I+K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV--------ETNASFLNSMRSSVGVVP 112
SSDGG+ MDVF+VTD G+K+ D+ + +I+ + +T + ++ VP
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVP 128
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
KE T++E++ TDRPGLLSE+SAVL +L CSV SA WTHN R A ++ ++D SS I
Sbjct: 129 -KENTALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPIS 187
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS----MSISSARVLHGERRLHQMLFADRDFERLDC 228
D +RL +++ L NV+ +G+ ++ + R H ERRLHQ+++ADRD+E
Sbjct: 188 DPERLGLVEEQLENVVAAHGETGQKKSVRVTTLGTGRT-HTERRLHQLMYADRDYESCRA 246
Query: 229 VNYNSR---------PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+ +S HV++ C D+ Y V +RS+DRPKLLFDTVC LTDMQYVV+H
Sbjct: 247 CDGDSSGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAA 306
Query: 280 VVTGRMEAYQEYYIKHVDG-FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL 338
+ + R A+QEY+I++ G + SE E++ + CL AAIERR S GL +++ TD+R GL
Sbjct: 307 ISSKRSMAHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVSHGLMVDIRTDNRMGL 366
Query: 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
LS++TR+ RE GL I R EI T G K +FFVTD+SG V+P IV+ ++ G +++
Sbjct: 367 LSNVTRVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEEVNPDIVELVRQASGGSVV 424
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/475 (41%), Positives = 294/475 (61%), Gaps = 46/475 (9%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D +F +L R+ P RV IDN+ E +V++VDSVN+ G+LLEV+Q L DLNL I+K+
Sbjct: 9 FDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTDLNLTISKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIK----TTVETNA-----SFLNSMRSSVG 109
YISSD G+ MDVF+V D G+K+ DQ I YI TT ET + S++N +
Sbjct: 69 YISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATPKSYVNDVFEGE- 127
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
S E+T+IE++GTDRPGL SE+SA L DL C++V A W+HNAR A + ++ DQS+
Sbjct: 128 --HSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDT 185
Query: 170 AIEDQKRLLKIKKLLCNVLRTNG------DLRTPSMSISSARVLHGERRLHQMLFADRDF 223
I+D RL I+ L V+R G +++T + V + ERRLHQ++ + RDF
Sbjct: 186 PIDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDF 245
Query: 224 ER--------------------LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFD 263
+ LD + + V+I +C ++ Y+ V+I KDRP+L+FD
Sbjct: 246 DGPLGSSITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRPRLMFD 305
Query: 264 TVCCLTDMQYVVYHGTVVTGR-MEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRA 322
TVC LTDMQYV++H ++ G A+QEY+I+++DG+ +++E+E++RV+ CLEAAIERR
Sbjct: 306 TVCTLTDMQYVIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAAIERRV 365
Query: 323 SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
EG+++EL ++R GLLSDITR+LRE GL + RA+++T G K + F+V D SGN VD
Sbjct: 366 CEGVKVELCAENRVGLLSDITRVLRENGLTVVRADVATQGEKAVNAFYVRDISGNEVDMG 425
Query: 383 IVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFK---GRSFQSFKLIK 434
V S++ ++G L+VK +++ P + ++ F + K GR +F IK
Sbjct: 426 FVKSMKKEMGAINLEVKKDISRP--ISRDQRARFSIGDMLKSQIGRFSHNFIQIK 478
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 200/452 (44%), Positives = 277/452 (61%), Gaps = 32/452 (7%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G K+ D + I+YI+ + L + + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQS-------LGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GL+SEV AVL D+ C+VV A WTH R L+ ++D+ + D +R+ +I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLCNVLRTNG-DLRTPSMSISSARVLHGERRLHQMLFADRDFER--LDCVNYNSRPHVTI 239
L ++LR + ++ +A V H ERRLHQ++ ADRD E + P V++
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++R Y+ VT++ +DRPKLLFD VC LTDM YVV+HGT+ T +A+QE+YI+H DG
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAER RV CL+ AIERR+ EG+ LEL T DR LLSD+TR RE GL + +AE+S
Sbjct: 293 PISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS---- 415
T G + F+VTDA+G+ V+ +D+++ ++G L + P+L Q+
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHR--PQLYQKAGPRDAVD 410
Query: 416 ----------FFFTNFFKGRSFQSFKLIKSCS 437
F+ NF K R+ S LIKSCS
Sbjct: 411 GNGGGGGIGLFYLGNFVK-RNLVSLGLIKSCS 441
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 211/462 (45%), Positives = 282/462 (61%), Gaps = 27/462 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
M DE+ KL+ RMNPPRV +DND AT+++VDS N++G LLEV+Q L DL L I +AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLN--SMRSSVGVVPSKEYT 117
SSDG + MDVF+V D +G K+ D I I+ ++ + SF +V + T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+IEL G DRPGLLSEV AVL DL C+VV++E+WTH+ R AAL+HV D + AIED RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 LKIKKLLCNVLR-TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN---- 232
++LL +VLR ++ D + ++S+ V H RRLHQM+ ADR R
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 233 ------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
P V + DC++R YT V +R +DR KLLFDTVC LTDMQYVV+HGTV+ E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRIL 346
AYQEYYI+H+D SS ER+R+ LEAAI+RR +EGL LEL +DR GLLSD+TR+
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVF 371
Query: 347 REYGLCIRRAEISTMGRKVKDTFFVTDA-SGNPVDPKIVDSIQHQIGRTILQVKGN---- 401
RE+GL + AE+ T G + + F+V DA SG PV + V +++ +IG +L V+ +
Sbjct: 372 REHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAA 431
Query: 402 ---LNTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
N RS N + RS + LI+SCS
Sbjct: 432 AAAANGTRSTVAGGRRS--LGNMIRSRSEKFLYNLGLIRSCS 471
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 272/433 (62%), Gaps = 29/433 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E L+ R++PPRV IDND C TV++VDS NR GILLE++Q L DL+L+I+K+YI
Sbjct: 9 IDREIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK-----TTVETNASFLNSMRSSVGVVPSK- 114
SSDGG+ MDVF+VTD G+K+ D+ + +I+ T + S + S G +
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQ 128
Query: 115 ----EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
E T++E++ TDR GLLSE+SAVL +L SV SA WTHN R A ++ ++D SS
Sbjct: 129 NVAMENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGP 188
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPS----MSISSARVLHGERRLHQMLFADRDFERL 226
I D KRL +++ L NV+ +G+ + ++ + R H ERRLHQ+++ADRD+E
Sbjct: 189 ISDPKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRT-HTERRLHQLMYADRDYESC 247
Query: 227 DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
+ R HV++ C D+ Y V +RS+DRPKLLFDTVC LTDMQYVV+H + + R
Sbjct: 248 RACD---RTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSM 304
Query: 287 AYQEYYIKHVDG-FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRI 345
A QEY+I+H G + SE+E + + CL AAIERR S GL +++ T++R GLLS++TR+
Sbjct: 305 ADQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVSRGLMVDIRTENRMGLLSNVTRV 364
Query: 346 LREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL--------- 396
RE GL I R EI T G K +FFVTD+SG V+P IV+ ++ G +++
Sbjct: 365 FRENGLSISRFEIGTEGEKAVGSFFVTDSSGEQVNPNIVELVRQASGGSVVTDHKSPHRV 424
Query: 397 -QVKGNLNTPPKL 408
Q + ++ PK
Sbjct: 425 RQSQSDIEAKPKF 437
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 272/436 (62%), Gaps = 37/436 (8%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D +F L R+ P RV IDN+ E TV++VDSVN+ G+LLEV+Q L DLNL I K
Sbjct: 1747 FDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKG 1806
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIK----TTVETNASFLNSMRSSVGVVP-- 112
YISSD G+ MDVF+V D +G+K+ DQ I+YI+ TT E+ S N+ + +
Sbjct: 1807 YISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTNNIFEAD 1866
Query: 113 -SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
S E+T+IE++GTDRPGL SE+SA L DL C++V W+HNAR A + ++ D SS I
Sbjct: 1867 HSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPI 1926
Query: 172 EDQKRLLKIKKLLCNVLRTNG-------------DLRTPSMSISSARVLHGERRLHQMLF 218
ED RL I+ L VLR N +++T V + ERRLHQ++
Sbjct: 1927 EDPHRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLML 1986
Query: 219 ADRDFER----------LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCL 268
+ RDF+ L+ S+ V+I +C ++Y+ V I KDR +L+FDT+C L
Sbjct: 1987 SVRDFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTL 2046
Query: 269 TDMQYVVYHGTVVT---GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEG 325
DMQYV++H +V + GR A+QEY+I+H DG+ ++E+E++RV+ CLEAAIERR SEG
Sbjct: 2047 NDMQYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEG 2104
Query: 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVD 385
+ L+L ++R GLLSDITR+LRE GL + RA+++T G K + F+V D SGN VD +
Sbjct: 2105 VLLKLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIK 2164
Query: 386 SIQHQIGRTILQVKGN 401
S++ ++G T L+V N
Sbjct: 2165 SMKKEMGLTDLEVIKN 2180
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 271/433 (62%), Gaps = 34/433 (7%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D +F L R+ P V IDN+ E TV++VDSVN+ G+LLEV+Q L DLNL I K YI
Sbjct: 9 FDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV--ETNASFLNSMRSSVGVV----PSK 114
SSD G+ MDVF+V D +G+K+ DQ I+YI+ + + + S+ + R+ + S
Sbjct: 69 SSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSS 128
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
E+T+IE++GTDRPGL SE+SA L DL C++V W+HNAR A + ++ D SS IED
Sbjct: 129 EHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDP 188
Query: 175 KRLLKIKKLLCNVLRTNG-------------DLRTPSMSISSARVLHGERRLHQMLFADR 221
RL I+ L VLR N +++T V + ERRLHQ++ + R
Sbjct: 189 HRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVR 248
Query: 222 DFER----------LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDM 271
DF+ L+ S+ V+I +C ++Y+ V I KDR +L+FDT+C L DM
Sbjct: 249 DFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDM 308
Query: 272 QYVVYHGTVVT---GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLEL 328
QYV++H +V + GR A+QEY+I+H DG+ ++E+E++RV+ CLEAAIERR SEG+ L
Sbjct: 309 QYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVLL 366
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQ 388
+L ++R GLLSDITR+LRE GL + RA+++T G K + F+V D SGN VD + S++
Sbjct: 367 KLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSMK 426
Query: 389 HQIGRTILQVKGN 401
++G T L+V N
Sbjct: 427 KEMGLTDLEVIKN 439
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/450 (41%), Positives = 270/450 (60%), Gaps = 36/450 (8%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D EF +L R+ P RV IDN+ E T+++V+S+N+ GILLEV++ L D+NL I+K+
Sbjct: 12 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 71
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV---PSKE 115
YISSD G+ M VF+V D +G K+ DQ I+YI+ + T NS+ V+ P+ E
Sbjct: 72 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 131
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T+IE++G DRPGL SE+SA L DL ++V A WTHN R A + ++ DQS+ IED
Sbjct: 132 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 191
Query: 176 RLLKIKKLLCNVL------RTN-GDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC 228
RL KI+ L VL R N +++ + + A ERRLHQ++ + DFE
Sbjct: 192 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 251
Query: 229 V---------------NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQY 273
+ S+ V+I C++R Y+ V+I KDR +L+FD VC +TDMQY
Sbjct: 252 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 311
Query: 274 VVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD 333
+++HG+ + A QEY+I+H+DG ++SE E++ V+ CLEAAIERR EG+ LEL +
Sbjct: 312 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCAN 371
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD---------PKIV 384
+R GLLSDITR+LRE GL + RA++ T G K + F+V D SGN VD K +
Sbjct: 372 NRLGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFI 431
Query: 385 DSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
+S++ ++G L VK + + P P R
Sbjct: 432 ESVKKEMGPIDLAVKKEITSSPSSPDHRPR 461
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/450 (41%), Positives = 270/450 (60%), Gaps = 36/450 (8%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D EF +L R+ P RV IDN+ E T+++V+S+N+ GILLEV++ L D+NL I+K+
Sbjct: 9 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV---PSKE 115
YISSD G+ M VF+V D +G K+ DQ I+YI+ + T NS+ V+ P+ E
Sbjct: 69 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 128
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T+IE++G DRPGL SE+SA L DL ++V A WTHN R A + ++ DQS+ IED
Sbjct: 129 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 188
Query: 176 RLLKIKKLLCNVL------RTN-GDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDC 228
RL KI+ L VL R N +++ + + A ERRLHQ++ + DFE
Sbjct: 189 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 248
Query: 229 V---------------NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQY 273
+ S+ V+I C++R Y+ V+I KDR +L+FD VC +TDMQY
Sbjct: 249 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 308
Query: 274 VVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD 333
+++HG+ + A QEY+I+H+DG ++SE E++ V+ CLEAAIERR EG+ LEL +
Sbjct: 309 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCAN 368
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD---------PKIV 384
+R GLLSDITR+LRE GL + RA++ T G K + F+V D SGN VD K +
Sbjct: 369 NRLGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFI 428
Query: 385 DSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
+S++ ++G L VK + + P P R
Sbjct: 429 ESVKKEMGPIDLAVKKEITSSPSSPDHRPR 458
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 210/462 (45%), Positives = 282/462 (61%), Gaps = 27/462 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
M DE+ KL+ RMNPPRV +DND AT+++VDS N++G LLEV+Q L DL L I +AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLN--SMRSSVGVVPSKEYT 117
SSDG + MDVF+V D +G K+ D I I+ ++ + SF +V + T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+IEL G DRPGLLSEV AVL DL C+VV++E+WTH+ R AAL+HV D + AIED RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 LKIKKLLCNVLR-TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN---- 232
++LL +VLR ++ D + ++S+ V + RRLHQM+ ADR R
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 233 ------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
P V + DC++R YT V +R +DR KLLFDTVC LTDMQYVV+HGTV+ E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRIL 346
AYQEYYI+H+D SS ER+R+ LEAAI+RR +EGL LEL +DR GLLSD+TR+
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVF 371
Query: 347 REYGLCIRRAEISTMGRKVKDTFFVTDA-SGNPVDPKIVDSIQHQIGRTILQVKGN---- 401
RE+GL + AE+ T G + + F+V DA SG PV + V +++ +IG +L V+ +
Sbjct: 372 REHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAA 431
Query: 402 ---LNTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
N RS N + RS + LI+SCS
Sbjct: 432 AAAANGTRSTVAGGRRS--LGNMIRSRSEKFLYNLGLIRSCS 471
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 267/415 (64%), Gaps = 10/415 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ N PRV ++ + E+AT+++V+S NRHGILL V+Q L DL+L ITK+ I
Sbjct: 9 FDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
D G+ MDVF+V D NG K D+ T +I ++ +S+R S G+ + ++
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTGLTVA-DH 127
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T IELTG DRPGLLSE+SAVLT L C+V +AE+WTHN RAA++++ D S+G I +Q +
Sbjct: 128 TVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSK 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSA-RVLHGERRLHQMLFADRDFERLD-CVNYNSR 234
L IK+ L V++ + D I A + H ERRLHQ+++ DR E D N R
Sbjct: 188 LDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANEVPDRSGNMQGR 247
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P + I ++R Y+ V+I KDRPKLLFD VC LTDMQYV+YH + E QE++I+
Sbjct: 248 PAIHI-KRNERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIR 306
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G + + AE Q + ACLEAAI RR SEGL LEL +DR GLLSD+TRI RE GL +
Sbjct: 307 HVNGCTLDTAAE-QHLKACLEAAISRRTSEGLRLELCMNDRVGLLSDVTRIFRENGLSVA 365
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLP 409
RA+I+T K + F+V DASG PV+ K+V++++ IG + L+VKG + P+LP
Sbjct: 366 RADITTRHDKAINVFYVVDASGRPVNMKVVEAMRETIGSS-LEVKGLPRSEPELP 419
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 40/225 (17%)
Query: 83 DQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSC 142
D Y ET S NS R +V S+ T +++ +R G+L V VLTDL
Sbjct: 2 DNPKWPYFDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDL 61
Query: 143 SVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSIS 202
++ ++I+ + HV D + A++ Q C+ + + RT S
Sbjct: 62 TITKSDIFHDLGWFMDVFHVVDSNGNKALDKQT---------CDHIMNSLGYRTRREQFS 112
Query: 203 SARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLF 262
+ + RR + A D+T + + DRP LL
Sbjct: 113 ADSL----RRSTGLTVA--------------------------DHTVIELTGPDRPGLLS 142
Query: 263 DTVCCLTDMQYVVYHGTVVTGRMEAYQ-EYYIKHVDGFPISSEAE 306
+ LT ++ V V T + A Y+ G PI+++++
Sbjct: 143 ELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSK 187
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 277/442 (62%), Gaps = 25/442 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ +PPRV I+ND ++ TV+QV S +RHGILL V+Q L DL+LVI K+ +
Sbjct: 9 FDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDM 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSVGVVPSKEY 116
SD G+ DVF+V D +G K+ D++ + +I+ ++ S + +R S G+ S ++
Sbjct: 69 FSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSGLSVS-DH 127
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +ELTG DRPGLLSE+SA+LT L C+V +AE+WTHN R A ++++ D ++G I+ Q R
Sbjct: 128 TVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSR 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSA-RVLHGERRLHQMLFADR-----DFERLDCVN 230
L IK+ L VLR D I A + H ERRLHQ+++ DR D+ R +
Sbjct: 188 LELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDRRHAGQDYSR----S 243
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
RP + I ++R Y+ V+I+ KDRPKLLFD VC LTDMQYV++H + + + QE
Sbjct: 244 SEDRPKIQI-KRNERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQE 302
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
++I+H +G + + AE Q ++ CLEAAI RR ++GL LEL +DR GLLS++T+I RE G
Sbjct: 303 FFIRHENGCTLETPAE-QHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFRENG 361
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
L + RA++ST K + F+V DASG PV+ K+V+ ++ IG ILQVKG TPP+ +
Sbjct: 362 LSVARADVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVKG---TPPQESE 418
Query: 411 EPARSFFFTNFFKG--RSFQSF 430
P NFF G R+F
Sbjct: 419 LPNPG---ANFFGGLYRTFSGL 437
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/458 (41%), Positives = 273/458 (59%), Gaps = 42/458 (9%)
Query: 1 MDDEFAKLIRRMNPP--RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D EF L R++ P RV +DN+ E TV++VDSVN+ G+LLEV+Q L D+NL I K+
Sbjct: 9 FDPEFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV------- 111
+ISSD G+ MDVF+V D NG K+ DQ I+ I+ + + + S + S
Sbjct: 69 FISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIGRSRASSPSQQHSNNNNNNSVFTT 128
Query: 112 -----------------PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA 154
P+ ++T+IE+TG DRPGL SE+SA L DL C++V A W+HNA
Sbjct: 129 MTNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNA 188
Query: 155 RAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRT----NG-------DLRTPSMSISS 203
R A + ++ DQS+ AI+D RL I+ L VLR NG D++T +
Sbjct: 189 RLACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGE 248
Query: 204 ARVLHGERRLHQMLFADRDFERLDCVNYNS--RPHVTILDCSDRDYTAVTIRSKDRPKLL 261
++ ERRLHQ++ + RDFE + V++ C + Y+ V+I KDRP+L+
Sbjct: 249 GQMTTVERRLHQLMLSVRDFETPSSPKEKKGRKRMVSVESCEQKGYSIVSIECKDRPRLM 308
Query: 262 FDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERR 321
FDTVC LTDMQYV++H ++ + A QEY+I+HVDG + + +E++RVM CLEAAIERR
Sbjct: 309 FDTVCTLTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAIERR 368
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
EG+ LEL D+R GLLSDITR+LRE GL + RA++ T G K + F+V D SGN VD
Sbjct: 369 VCEGIRLELCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVRDISGNEVDI 428
Query: 382 K-IVDSIQHQIGR-TILQVKGNLN-TPPKLPQEPARSF 416
+ +S++ ++G L VK + N P P++ SF
Sbjct: 429 EYFSNSVKKEMGPIATLHVKNDTNRRKPNSPKQAPLSF 466
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 275/440 (62%), Gaps = 41/440 (9%)
Query: 1 MDDEFAKLIRRM-NPP-RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D +F L R+ PP RV IDND + TV++V+S N+ G+LLEV+Q L D+NL+ITK+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--------ASFLNSMRSSVGV 110
YISSDGG+ MDVF+V D +G K+ D++ I++IK + T+ AS N+ +
Sbjct: 69 YISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANNNSLEPQL 128
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
E+T+IE+TGTDRPGL SE+ A DL C+V+ A W+HNAR A + +V D ++
Sbjct: 129 ADHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTP 188
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSAR-----VLHG----------ERRLHQ 215
I+D RL I+ L V+R D + S + L G ERRLHQ
Sbjct: 189 IDDPSRLASIEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSNMERRLHQ 248
Query: 216 MLFADRDFE--------------RLDCVNYNSRPH--VTILDCSDRDYTAVTIRSKDRPK 259
++ + RDF+ +L+ ++ R V+I +C +R Y+ VT++SKDR +
Sbjct: 249 LMLSVRDFDEPFCEPSSLSLLSSKLEYCDHKERKTTIVSIGNCEERGYSIVTVKSKDRRR 308
Query: 260 LLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319
L+FDT+C L DMQYV++H + + +A+QEY+I+H+DG +++E E++RV+ CLEAAIE
Sbjct: 309 LMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCLEAAIE 368
Query: 320 RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
RR EG++LEL ++R GLLSDITR+LRE GL + RA++ T G+K + F+V D SGN +
Sbjct: 369 RRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRDISGNKI 428
Query: 380 DPKIVDSIQHQIGRTILQVK 399
D + V+S++ ++ L+VK
Sbjct: 429 DMEFVESVKKEMRPIHLEVK 448
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 271/448 (60%), Gaps = 58/448 (12%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKL+RRMNPP VVIDND C+ ATVI+VD V +HGILLE +Q LVDLNLVITKAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF-LNSMRSSVGVVPSKEYTSIE 120
SDG + MDVF VTD +G K+ ++ IK +E+ L + + G PS+E T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
LTGTDRPGLLSEV AVL L C++V+AE+WTH+ RAAA++ + D+++G + D RL ++
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVL---HGERRLHQMLFADRDF-----ERLDCVNYN 232
++LL NV++ +GD S S+A L + ERRLH+++ D D ER
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAK 253
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
++ V ++DC++R YT V +R +DRP+LLFDT+ LTD+ YVV+HGT
Sbjct: 254 AKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT------------- 300
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLC 352
GLELE+ T+DR GLLS+ITR+ RE L
Sbjct: 301 --------------------------------GLELEVKTEDRAGLLSEITRVFRENSLS 328
Query: 353 IRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP 412
I RA I+T + DTF+V+DA GNPVD K ++++ Q+G +L+VK N ++
Sbjct: 329 IIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDS 388
Query: 413 ---ARSFFFTNFFKGRSFQSFKLIKSCS 437
+ N KG SFQ F+LI+S S
Sbjct: 389 GGGGAAAIIGNLLKG-SFQGFRLIRSYS 415
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 277/446 (62%), Gaps = 22/446 (4%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ +R+NPPRV IDND TV++VDS+N++GILLEV+Q L DL+L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYI 64
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS------SVGVVPSK 114
+SDGG+ MDVF+V + GQK+ D TI YI+ + ++ ++ + SVG+
Sbjct: 65 TSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMHSIG 124
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE-D 173
++T+IEL G DR GLLSE+ AVL +L C+V++AE+WTH AR A +++V D ++G I+ D
Sbjct: 125 DHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDVD 184
Query: 174 QKRLLKIKKLLCNVLRTNG---DLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
+R+ I+ L NVLR +G + T + + + H +RRLHQ++ A D E +D
Sbjct: 185 TRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFAVGSTHVDRRLHQLMNA--DMELVDAQG 242
Query: 231 YNSRP-----HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
VT+ C ++DY+ V +R +DR KLLFD VC LTDMQYVV H V + +
Sbjct: 243 EGEEVADDGMSVTVGYCKEKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGL 302
Query: 286 EAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRI 345
QE +I+ DG + + E +V+ CL+AAI RR SEG LE+ DR GLLS++TR+
Sbjct: 303 YGVQELFIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSEGFTLEVCGRDRVGLLSEVTRV 361
Query: 346 LREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTP 405
LRE+GL + RA+++T+G + + F+V DASG VD K ++ ++ QIG+T++ + P
Sbjct: 362 LREHGLTVTRADVATVGEQAMNVFYVRDASGQTVDMKTIEGLRGQIGQTVMLNVKKVPAP 421
Query: 406 PKLPQEPARSFFF-TNFFKGRSFQSF 430
P EPAR T FF SF S
Sbjct: 422 AVKPPEPARGGVAKTGFF---SFGSL 444
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 184/393 (46%), Positives = 256/393 (65%), Gaps = 15/393 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G K+ D + I+YI+ + L + + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQS-------LGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GL+SEV AVL D+ C+VV A WTH R L+ ++D+ + D +R+ +I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLCNVLRTNG-DLRTPSMSISSARVLHGERRLHQMLFADRDFER--LDCVNYNSRPHVTI 239
L ++LR + ++ +A V H ERRLHQ++ ADRD E + P V++
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++R Y+ VT++ +DRPKLLFD VC LTDM YVV+HGT+ T +A+QE+YI+H DG
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAER RV CL+ AIERR+ EG+ LEL T DR LLSD+TR RE GL + +AE+S
Sbjct: 293 PISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
T G + F+VTDA+G+ V+ +D+++ ++G
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVG 385
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/393 (46%), Positives = 256/393 (65%), Gaps = 15/393 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G K+ D + I+YI+ + L + + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQS-------LGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GL+SEV AVL D+ C+VV A WTH R L+ ++D+ + D +R+ +I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLCNVLRTNG-DLRTPSMSISSARVLHGERRLHQMLFADRDFER--LDCVNYNSRPHVTI 239
L ++LR + ++ +A V H ERRLHQ++ ADRD E + P V++
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++R Y+ VT++ +DRPKLLFD VC LTDM YVV+HGT+ T +A+QE+YI+H DG
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PISSEAER RV CL+ AIERR+ EG+ LEL T DR LLSD+TR RE GL + +AE+S
Sbjct: 293 PISSEAERHRVSQCLQYAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
T G + F+VTDA+G+ V+ +D+++ ++G
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVG 385
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/295 (56%), Positives = 223/295 (75%), Gaps = 4/295 (1%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MDDE+ KL RRMNPPRVVIDN ++ATVI+VDS N+ GILLEV+Q L DLNL+ITKAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ + F +MR SVGV + ++T+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G+DRPGLLSEVSAVLT+L C++V+AE+WTHN RAAA++HV D+ +G AI D +RL I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN--SRPHVT 238
K+LLCNVL G+ + + ++ + H +RRLHQM+F DRD+ER+D +++ RP+V
Sbjct: 196 KELLCNVL-GGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVD 254
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
+++ SD+DY+ VTI +DRPKL+FDTVC LTDMQYVV+H + +AYQ Y I
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVYII 309
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
++ G+L ++ +IL + L I +A IS+ G D F VTD GN V D I+D I+ +G
Sbjct: 52 NKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLG 111
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q + D ++E+L + P V I + + ++ T + + S ++ +L + V LTD+ +
Sbjct: 13 QSHYMDDEYEKL--FRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLI 70
Query: 275 VYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVM------ACLEAAIE----RRASE 324
+ + + + + DG ++ E + +C + ++ +
Sbjct: 71 ITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPD 130
Query: 325 GLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
+EL DR GLLS+++ +L I AE+ T + VTD
Sbjct: 131 HTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/436 (42%), Positives = 268/436 (61%), Gaps = 24/436 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ +R+NPPRV IDN C T+++VDS+N++GILLEV+Q L DL+L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYI 64
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFL-----NSMRSSVGVVPSKE 115
+SDGG+ MDVF+V D GQKI D TI YI+ + ++ L NS SVG+ +
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGD 124
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T+IEL G DR GLLSE+ AVL DL C+V++AE+WTH R A +++V D ++G AI+D
Sbjct: 125 HTAIELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPD 184
Query: 176 RLLKIKKLLCNVLRTNGDLRT-----------PSMSISSARVLHGERRLHQMLFADRD-- 222
R+ +++ L +VLR G + + +S+ H +RRLHQ++ AD D
Sbjct: 185 RVARVEDRLRHVLRGYGGGGGAGDDDDGSGAHANFAAASSTPHHVDRRLHQLMHADVDAV 244
Query: 223 ---FERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
RP VT+ C ++ Y+ V ++ KDR KLLFD VC LTDM+YVV+H
Sbjct: 245 HGDGAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAA 304
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLL 339
V + QE YI+ DG + + E ++V+ CLEAAI RR SEG LE+ DR GLL
Sbjct: 305 VSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSEGFTLEVCGRDRVGLL 363
Query: 340 SDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399
SD+TR+LRE+GL + RA+++T G + + F+V + SG PVD K V+ ++ Q G+T +
Sbjct: 364 SDVTRVLREHGLTVSRADVTTAGGQATNVFYVRNPSGQPVDMKTVEGLRGQFGQTAMLNV 423
Query: 400 GNLNTPPKLPQ--EPA 413
++ P + + EP+
Sbjct: 424 KSVGVPAAVAKAAEPS 439
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/429 (44%), Positives = 268/429 (62%), Gaps = 10/429 (2%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ NPP+V ++ + E+ATV++V S NRHGILL V+Q L DL+L ITK+ I
Sbjct: 9 FDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYI----KTTVETNASFLNSMRSSVGVVPSKEY 116
D G+ MDVF+V D NG K D+ T +I T ++A+ + +R S G+ S E+
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTGLTCS-EH 127
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T IELTG DRPGLLSE+SAVLT L C+V AE+WTHN R A++++ D ++G I Q +
Sbjct: 128 TVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSK 187
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSA-RVLHGERRLHQMLFADRDFERLDCV-NYNSR 234
L I+ L V++ + D I A + H ERRLHQ+++ DR E N R
Sbjct: 188 LDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNEVPHVSGNPQQR 247
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P + I ++R Y+ V+I+ KDR KLLFD VC LTDMQYV+YH + + E QE++I+
Sbjct: 248 PVIQI-KRNERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIR 306
Query: 295 HVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIR 354
HV+G + + A+ + + CLEAAI RR SEGL LEL DR GLLSD+TR+ RE GL +
Sbjct: 307 HVNGCTLDT-ADAEHLKVCLEAAINRRTSEGLRLELCMSDRIGLLSDVTRLFRENGLSVA 365
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEP-A 413
RA+I+T K + F+V DASG+PV+ +V++++ +G +IL+VKG P+LP +
Sbjct: 366 RADITTRDDKAVNVFYVVDASGSPVNMNVVETMRKSLGHSILEVKGLPRPEPELPSSKLS 425
Query: 414 RSFFFTNFF 422
F NF+
Sbjct: 426 LGGLFRNFY 434
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/427 (43%), Positives = 265/427 (62%), Gaps = 32/427 (7%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D E+ +R+NPPRV IDN C T+++VDS+N++GILLEV+Q L DL+L I+KAYI
Sbjct: 5 FDPEYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYI 64
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS------SVGVVPSK 114
+SDGG+ MDVF+V D GQK+ D+ TI +I+ + +++ L + SVG+
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIG 124
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
++T+IEL G DR GLLSEV AVL +L C+V++AE+WTH AR A +++V D +SG A+ D
Sbjct: 125 DHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDP 184
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARV-----------LHGERRLHQMLFADRDF 223
RL +I+ L VLR + A H +RRLHQ++ AD D
Sbjct: 185 CRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDA 244
Query: 224 ERLDCVNYNS--------------RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLT 269
+ D ++ + RP VT+ C ++DY+ V ++ +DR KLLFD VC LT
Sbjct: 245 DDDDGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLT 304
Query: 270 DMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELE 329
DM YVV H +V + + QE YI+ DG + + E RV+ CLEAAI RR SEG LE
Sbjct: 305 DMHYVVSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLE 363
Query: 330 LYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQH 389
L DR GLLSD+TR+LRE+GL + RA+++T+G + + F+V DASG PVD K ++ ++
Sbjct: 364 LCGRDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRV 423
Query: 390 QIGRTIL 396
Q+G T++
Sbjct: 424 QVGHTVM 430
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 261/411 (63%), Gaps = 16/411 (3%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN +C AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G+K+ D + I+YI+ + L + + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQS-------LGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ--SSGCAIEDQKRLLKI 180
G DR GLLSEV AVL D+ CSVV A WTH R A ++ ++ + +SG + +D R+ +I
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS-RPHVTI 239
L ++LR +G+ ++ +A V H +R LHQ++ AD D R + P V++
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLD--RAPSFPAPALSPAVSV 235
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
++R Y+ VT+ +DRPKLLFD VC L DM YVV+HGTV T A QE+YI+ DG
Sbjct: 236 QSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGS 295
Query: 300 PISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIS 359
PI SEAER+R+ CL+AAIERR+ EG+ LEL T DR GLLS++TR RE GL + +AE+S
Sbjct: 296 PIRSEAERERLNQCLQAAIERRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVVQAEVS 355
Query: 360 TMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
T G + F+VTDA+G D +D+++ ++G L V + P+ PQ
Sbjct: 356 TKGDLASNVFYVTDAAGKAADQSAIDAVRERVGMDRLVV----SEEPRPPQ 402
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/399 (45%), Positives = 266/399 (66%), Gaps = 12/399 (3%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D E+ + ++PP+V+IDND ++AT+++V S N+HG LLEV+Q L+D++L I+KAYI+
Sbjct: 11 DPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYIT 70
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTV-----ETNASFLNSMRSSVGVVPSKEY 116
SDGG+ MDVF+VTD G KI D+ I I+ + + A F SVG E+
Sbjct: 71 SDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISEH 130
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T+IELTGTDRPGLLSEV+AVL ++SC V +AE+WTHN R A +++V D+ + IE+ ++
Sbjct: 131 TAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVRK 190
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RLDCVNYNSR- 234
L +I + L +++ D + + S+ + H ERRLHQ++ AD D + + +SR
Sbjct: 191 LERILEKLNPIMQGCDDEKV-ARSVVAESFTHVERRLHQLMLADHDSDPSVSQSQISSRK 249
Query: 235 ---PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P++T+ S+++Y+ V ++ DRPKLLFDTVC LTD++YVV H T+ A QEY
Sbjct: 250 QKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQEY 309
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGL 351
+I+ +DG + A + +V CLEAAIERR+SEGL L L T DR GLL+++TR RE GL
Sbjct: 310 HIRSMDGRTLDDPA-KAKVKRCLEAAIERRSSEGLRLYLCTTDRPGLLTEVTRTFRENGL 368
Query: 352 CIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQ 390
+ RAE+ST G K +TF+VTD +G PVD K V++I+ +
Sbjct: 369 SVTRAEVSTQGDKAVNTFYVTDVNGLPVDLKKVEAIRKE 407
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 185/446 (41%), Positives = 274/446 (61%), Gaps = 49/446 (10%)
Query: 1 MDDEFAKLIRRM-NPP-RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA 58
D +F L R+ PP RV IDND TV++V+S N+ G+LLEV+Q L D+NL+ITK+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN---ASFL-----------NSM 104
YISSDGG+ MDVF+V D G K+ D++ I++IK + T+ + F+ NS+
Sbjct: 69 YISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHNNPNNNSL 128
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S + E+T+IE+TGTDRPGL SE+ A DL C+V+ A W+HNAR A + +V D
Sbjct: 129 ESPLS--DHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSD 186
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSAR-----VLHG---------- 209
++ I+D RL I+ L V+R D + S + L G
Sbjct: 187 DNTHTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGCMNSNV 246
Query: 210 ERRLHQMLFADRDFERLDC-----------VNYNSRPH-----VTILDCSDRDYTAVTIR 253
ERRLHQ++ + RDF+ C + Y + V+I +C +R Y+ VT++
Sbjct: 247 ERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDQKERKTTIVSIGNCEERGYSIVTVK 306
Query: 254 SKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMAC 313
SKDR +L+FDT+C L DMQYV++H + + +A+QEY+I+H+DG +++E E++RV+ C
Sbjct: 307 SKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKC 366
Query: 314 LEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
LEAAIERR EG++LEL ++R GLLSDITR+LRE GL + RA++ T G+K + F+V D
Sbjct: 367 LEAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRD 426
Query: 374 ASGNPVDPKIVDSIQHQIGRTILQVK 399
SGN +D + V+S++ ++ L+VK
Sbjct: 427 ISGNKIDMEFVESVKKEMRPIHLEVK 452
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 267/433 (61%), Gaps = 26/433 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E L R++P RV IDN+ C+ TV++VDS N++GILLE++Q L DL+L+I+K+YI
Sbjct: 9 VDREIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV------------ETNASFLNSMRSSV 108
SSDGG+ MDVF+VTD G+K+ D+ + I+ + E S
Sbjct: 69 SSDGGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYS 128
Query: 109 GVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+ S E T++E++G DRPGLLSE+SAVL ++SC+V SA WTHN R A +L+V++ S
Sbjct: 129 KQIVSTENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKP 188
Query: 169 CAIEDQKRLLKIKKLLCNVLRTN---GDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
I D +RL ++K+ L +V+ + G+ + +A H ERRLHQ+++ADRD+E
Sbjct: 189 GPIRDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGRTHTERRLHQLMYADRDYEG 248
Query: 226 LDCVNYNSR---------PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
+ +S HV+I C DR Y V + +DRPKL FDTVC L DMQYVV+
Sbjct: 249 CRACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYVVF 308
Query: 277 HGTVVTGRMEAYQEYYIKH-VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDR 335
H + + + A QEYYI+H +G + +++ER++++ C+ AAIERR S GL +++ T+++
Sbjct: 309 HAAISSKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVSHGLRVDICTENK 368
Query: 336 FGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTI 395
GLLS +TR++RE GL I R EI G V TF+V D SG V P IV+ ++ + G ++
Sbjct: 369 TGLLSKVTRVIRENGLSIPRVEIGMRGDDVVGTFYVRDPSGQEVKPNIVELLRQECGGSV 428
Query: 396 LQVKGNLNTPPKL 408
V + P KL
Sbjct: 429 -DVVTDHKAPRKL 440
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/444 (43%), Positives = 264/444 (59%), Gaps = 22/444 (4%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+DN VC AT++QV S +HG+LLE + L D + + K YISSD G +
Sbjct: 13 FVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSV---GVVPSKEYTSIELT 122
MDVF+VTD +G+K+ D A ++ +++++ +A + ++ G P+ T +EL
Sbjct: 73 FMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLLELV 131
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLLSEV AVL DL C + A WTH R AAL+ V+D +G I+D R+ +++
Sbjct: 132 GADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRRVES 191
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE-RLDCVNYNSRPHVTILD 241
L +VLR G M A ++ +RRLHQ+L D + E R D + + V + D
Sbjct: 192 RLRHVLR--GGALGARMVREDAAAVNMDRRLHQLLNEDGEAECRADQADATA---VAVQD 246
Query: 242 CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI 301
+R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +DG PI
Sbjct: 247 WGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPI 306
Query: 302 SSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM 361
SS AER+RV+ CL+AAIERRASEG+ LEL DR GLL+ +TR+ RE L + AEI+T
Sbjct: 307 SSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTR 366
Query: 362 GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL--------PQEPA 413
G K + F VTD +G P DPK +D + +IG L+V + P+L
Sbjct: 367 GDKAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRV--DEERWPRLCSTEGDAGRGGGG 424
Query: 414 RSFFFTNFFKGRSFQSFKLIKSCS 437
F ++ S LI+SCS
Sbjct: 425 AGIFSLGSLVKKNLASLGLIRSCS 448
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 251/400 (62%), Gaps = 7/400 (1%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
+ +R MN PRVV+DN VCE AT++QV S ++G+LLE + L D + + K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-YLMDVFYVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTS---- 118
G + MDVF+VTD G+K+ D ++ +++++ A+ +++ G S
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
+EL G DRPGLLSEV AVL DL CS+V A+ WTH R AAL+ V+D+ +G I+D R
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 KIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVT 238
+I+ L VLR G ++ + +A V + +RRLHQ+L DR+ + + + V
Sbjct: 190 RIESRLRYVLR-GGARGARTILVDAAAVGNLDRRLHQLLNEDREADGRPAADRPTTTAVA 248
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ + +R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +DG
Sbjct: 249 VQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDG 308
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
PISS AERQRV+ L+AAIERRASEG+ LEL DR GLL+ +TR+ RE L + AEI
Sbjct: 309 QPISSAAERQRVIQRLQAAIERRASEGVRLELSIKDRRGLLAYVTRVFRENSLSVTHAEI 368
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
+T G K + F VTD +G P DPK +D + H IG L+V
Sbjct: 369 TTRGDKALNVFHVTDVAGRPADPKAIDEVIHGIGTESLRV 408
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 260/420 (61%), Gaps = 32/420 (7%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL 67
L++ + RV IDN C T+++VDS+N++GILLEV+Q L DL+L I+KAYI+SDGG+
Sbjct: 141 LLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS------SVGVVPSKEYTSIEL 121
MDVF+V D GQK+ D+ TI +I+ + +++ L + SVG+ ++T+IEL
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
G DR GLLSEV AVL +L C+V++AE+WTH AR A +++V D +SG A+ D RL +I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 KLLCNVLRTNGDLRTPSMSISSARV-----------LHGERRLHQMLFADRDFERLDCVN 230
L VLR + A H +RRLHQ++ AD D + D ++
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 YNS--------------RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
+ RP VT+ C ++DY+ V ++ +DR KLLFD VC LTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRF 336
H +V + + QE YI+ DG + + E RV+ CLEAAI RR SEG LEL DR
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
GLLSD+TR+LRE+GL + RA+++T+G + + F+V DASG PVD K ++ ++ Q+G T++
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 193/464 (41%), Positives = 273/464 (58%), Gaps = 50/464 (10%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL 67
L++ + RV IDN C T+++VDS+N++GILLEV+Q L DL+L I+KAYI+SDGG+
Sbjct: 141 LLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS------SVGVVPSKEYTSIEL 121
MDVF+V D GQK+ D+ TI +I+ + +++ L + SVG+ ++T+IEL
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
G DR GLLSEV AVL +L C+V++AE+WTH AR A +++V D +SG A+ D RL +I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 KLLCNVLRTNGDLRTPSMSISSARV-----------LHGERRLHQMLFADRDFERLDCVN 230
L VLR + A H +RRLHQ++ AD D + D ++
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 YNS--------------RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
+ RP VT+ C ++DY+ V ++ +DR KLLFD VC LTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRF 336
H +V + + QE YI+ DG + + E RV+ CLEAAI RR SEG LEL DR
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTI- 395
GLLSD+TR+LRE+GL + RA+++T+G + + F+V DASG PVD K ++ ++ Q+G T+
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
Query: 396 LQVK----------GNLNTPPKLPQEPAR------SFF-FTNFF 422
L VK K P +PA SFF F N F
Sbjct: 560 LNVKKVPSSPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLF 603
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/437 (42%), Positives = 253/437 (57%), Gaps = 16/437 (3%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+DN VC AT++QV S +HG+LLE + L D + + K YISSD G +
Sbjct: 13 FVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDR 126
MDVF+VTD G+K+ A + +E++ S + + T +EL G DR
Sbjct: 73 FMDVFHVTDAAGRKV-ADADADALLARLESSLSADALPPRTPPAAAAGTPTLLELVGADR 131
Query: 127 PGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCN 186
PGLLSEV AVL DL C + A WTH R AAL+ V+D+ +G I+D R+ +++ L +
Sbjct: 132 PGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRVESRLRH 191
Query: 187 VLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRD 246
VLR G M + A ++ +RRLHQ+L D + E + V + D +R
Sbjct: 192 VLR--GGALGARMVRADAAAVNMDRRLHQLLNEDGEAES----RADQATAVAVQDWGERG 245
Query: 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAE 306
Y+ +T+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +DG PISS AE
Sbjct: 246 YSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAE 305
Query: 307 RQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVK 366
R+RV+ CL+AAIERRASEG+ LEL DR GLL+ +TR+ RE L + AEI+T G
Sbjct: 306 RRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTRGDMAM 365
Query: 367 DTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL------PQEPARSFFFTN 420
+ F VTD +G P DPK +D + +IG L+V + P+L F
Sbjct: 366 NVFHVTDVAGRPADPKTIDEVIQRIGTESLRV--DEERWPRLCLTEGDAGRGGAGIFSLG 423
Query: 421 FFKGRSFQSFKLIKSCS 437
++ S LI+SCS
Sbjct: 424 SLVKKNLASLGLIRSCS 440
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 261/441 (59%), Gaps = 22/441 (4%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+D+ VC AT++QV S +HG+LLE + L + + + K YISSD G +
Sbjct: 13 FVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTD 125
MDVF+VTD G+K+ D A ++ +++++ A R++ G ++ T +EL G D
Sbjct: 73 FMDVFHVTDAAGRKVADADALLARLESSLSAEAL----PRAAAGGPAAEGLTLLELVGAD 128
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLLSEV AVL DL C+ V A WTH R AAL+ V+D+ +G I+D R+ +I+ L
Sbjct: 129 RPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLR 188
Query: 186 NVLRTNGD-LRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSD 244
+VLR RT S+A L +RRLHQ+L D + + + V + D +
Sbjct: 189 HVLRGGARCARTVLADPSAAGNL--DRRLHQLLKEDGEADSRGAAPMTA---VAVQDWGE 243
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSE 304
R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ DG PISSE
Sbjct: 244 RGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSE 303
Query: 305 AERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
AERQ V+ CL+AAIERRASEG+ LEL DR GLL+ +TR+ RE GL + AEI+T
Sbjct: 304 AERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDM 363
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL--------PQEPARSF 416
+ F VTD +G P DPK +D + +IG L+V + P+L +
Sbjct: 364 AMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRV--DEERWPRLCSAEGDAAGRGGGGGL 421
Query: 417 FFTNFFKGRSFQSFKLIKSCS 437
F ++ S LI+SCS
Sbjct: 422 FSLGSLVKKNLFSLGLIRSCS 442
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/463 (42%), Positives = 274/463 (59%), Gaps = 33/463 (7%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DEF KL+ RMNPPRV +DN+ AT+++VDS N++G LLEV+Q L DL L I +AYISS
Sbjct: 15 DEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SF-LNSMRSSVGVVPSKEYTSIE 120
DG + MDVF+V D G K+ D I I+ ++ + SF + + T+IE
Sbjct: 75 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIE 134
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE---DQKRL 177
L G DRPGLLSEV AVLT+L C++ S+E+WTH+ R AAL+ V D +G IE D +RL
Sbjct: 135 LVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERL 194
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD------RDFERLDCVNY 231
+K+LL +VLR ++ LH RRLHQM+ AD +
Sbjct: 195 DTVKRLLRHVLRGRA-----AVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDEEEED 249
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
V + +C++R YT V +R +DR KLLFDTVC LTDMQYVV+HGTV+ EAYQE+
Sbjct: 250 CEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEF 309
Query: 292 YIKHV--DGFPISSEAERQRVMACLEAAIERRASEG-LELELYTDDRFGLLSDITRILRE 348
YI+H+ +S A+R R+ CL+AAI+RR +EG + LEL +DR GLLSD+TR+ RE
Sbjct: 310 YIRHLDDGAAASASAADRARLRRCLQAAIQRRNTEGVVGLELRCEDRPGLLSDVTRVFRE 369
Query: 349 YGLCIRRAEISTMGRKVKDTFFVTDASGN-PVDPKIVDSIQHQIGRTILQVKGN------ 401
+GL + AE++T G + D F V ASG+ PV + VD+++ ++G IL +K +
Sbjct: 370 HGLSVTHAEVATWGTQAADVFRVVTASGDAPVPARAVDAVRAEVGEDILFIKDDTLAASA 429
Query: 402 --LNTP--PKLPQEPARSFFFTNFFKGRSFQ---SFKLIKSCS 437
+ P P N + RS + + LI+SCS
Sbjct: 430 NAVGGPVSPTGRGGGDGRRSLGNMIRSRSEKFLFNLGLIRSCS 472
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/450 (41%), Positives = 263/450 (58%), Gaps = 37/450 (8%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G+K+ D + I+YI+ + L + + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQS-------LGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GLLSEV AVL DL C VV A WTH R A + ++ + D R+ +I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILA 171
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH----VT 238
L +++R +G+ ++ +A V H +RRLHQ++ AD N ++ P+ V+
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADH--------NNSATPYPAAAVS 223
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQEYYIKHVD 297
+ ++R Y+ VT++ +DRPKLLFD VC L + YVV+HGTV T + A QE+YI D
Sbjct: 224 VQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSAD 283
Query: 298 GFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAE 357
G PI SEAER+R+ CL+AAI+RR+ EG+ LEL T DR GLLS++TR RE GL + AE
Sbjct: 284 GSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAHAE 343
Query: 358 ISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFF 417
+ST G + F+VTDA G +++++ ++G L V G PP++ E
Sbjct: 344 VSTKGGLASNVFYVTDADGKAAGQSAIEAVRARVGADCL-VVGEEPRPPRVFPEAGPGDR 402
Query: 418 FTNFFKG----------RSFQSFKLIKSCS 437
R+ + LIKSCS
Sbjct: 403 DHGGGGLGLVYLGNLVKRNLYNLGLIKSCS 432
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/457 (38%), Positives = 275/457 (60%), Gaps = 37/457 (8%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E L+ R+NPPRV +DND T+I+VDS N++GILL+++Q L DL+LVI+K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--ASFLNSMRSSVGVVP-----S 113
SSDG + MDVF+VTD G K+ D++ I YI+ + ++ M+S++ S
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
E+T+ E+TG +RPGLLSE+SAVL+D+ C V +A WTH+ RAA +++++D +G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 QKRLLKIKKLLCNVLRTN---GDLRTPSMSISSARVL-----HGERRLHQMLFADRDFER 225
R ++K L V+ + GD+ + + A+ + H ERRLH++++ + D+E
Sbjct: 190 PIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 -LDCVNYN-----------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQY 273
DC + R HVTI C+ Y+ V ++ +DRPKLLFDTVC L ++Q+
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTIEACNG--YSMVNVKCRDRPKLLFDTVCALKELQF 307
Query: 274 VVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD 333
VV+H A QEY+I+ +G + +E +R+R+ CL AAI RRAS+GL+LE+ T+
Sbjct: 308 VVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTE 367
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
++ GLLSD+TR++RE GL I RAE+ T G +F+VTD +G P V+++ ++G
Sbjct: 368 NKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGG 427
Query: 394 TILQVKGNLNTPPK--------LPQEPARSFFFTNFF 422
++ + P+ + Q+ A+S F+
Sbjct: 428 AVVSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFW 464
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/451 (41%), Positives = 262/451 (58%), Gaps = 38/451 (8%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G+K+ D + I+YI+ + L + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQS-------LGXWNEPARPAALEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GLLSEV AVL DL C VV A WTH R A + ++ + R+ +I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEGXA------DRVARILA 171
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH------ 236
L +++R +G+ ++ +A V H +RRLH+++ AD N ++ P+
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAADH--------NNSATPYPAAAAA 223
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQEYYIKH 295
V++ ++R Y+ VT++ +DRPKLLFD VC L + YVV+HGTV T + QE+YI+
Sbjct: 224 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRS 283
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
DG PI SEAER+R+ CL+AAI+RR+ EG+ LEL T DR GLLS++TR RE GL +
Sbjct: 284 ADGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAH 343
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPA-- 413
AE+ST G + F+VTDA G +D+++ ++G L V G PP++ E
Sbjct: 344 AEVSTKGGLASNVFYVTDADGKAAGQSAIDAVRARVGADCL-VVGEEPRPPRVFPEAGPG 402
Query: 414 -------RSFFFTNFFKGRSFQSFKLIKSCS 437
+ R+ + LIKSCS
Sbjct: 403 DRDHGGGLGLVYLGNLVKRNLYNLGLIKSCS 433
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 264/433 (60%), Gaps = 29/433 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E L+ R+NPPRV +DND T+I+VDS N++GILL+++Q L DL+LVI+K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--ASFLNSMRSSVGVVP-----S 113
SSDG + MDVF+VTD G K+ D++ I YI+ + ++ M+S++ S
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
E+T+ E+TG +RPGLLSE+SAVL+D+ C V +A WTH+ RAA +++++D +G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 QKRLLKIKKLLCNVLRTN---GDLRTPSMSISSAR-----VLHGERRLHQMLFADRDFER 225
R ++K L V+ + GD+ + + A+ H ERRLH++++ + D+E
Sbjct: 190 PIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 -LDCVNYN-----------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQY 273
DC + R HVTI C+ Y+ V ++ +DRPKLLFDTVC L ++Q+
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTIEACNG--YSMVNVKCRDRPKLLFDTVCALKELQF 307
Query: 274 VVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD 333
VV+H A QEY+I+ +G + +E +R+R+ CL AAI RRAS GL+LE+ T+
Sbjct: 308 VVFHAVAGAKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRASRGLKLEIRTE 367
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
++ GLLSD+TR++RE GL I RAE+ T G +F+VTD +G + V+++ ++G
Sbjct: 368 NKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETNANAVEAVVRELGG 427
Query: 394 TILQVKGNLNTPP 406
++ + P
Sbjct: 428 AVVSAVKAVGMVP 440
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 265/468 (56%), Gaps = 49/468 (10%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQV-------DSVNRHGILLEVIQFLVDLNLVI 55
+E+ KL+ RM+ P+VVIDN C AT++QV DS G+LLE +Q L DL+L I
Sbjct: 5 NEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVLADLDLSI 64
Query: 56 TKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKE 115
KAYISSDG + MDVF+VTD G+K+ D + ISYI+ + L + VG+ PS
Sbjct: 65 NKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQS-------LAAWNGPVGIDPSAS 117
Query: 116 ------YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
T +ELTG DR GL+SEV AVL D+ C VV A W+H R A L++++D
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADV-- 175
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPS-----MSISSARVLHGERRLHQMLFADRDFE 224
+I+ L +LR S ++ + V H +RRLHQ++ A E
Sbjct: 176 ---AAAGAARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAARE 232
Query: 225 RLDCVNYNSR---PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV- 280
D S P V++ ++R Y+ VT++ DRPKLL+D VC LTDM YVV+HGTV
Sbjct: 233 HDDRRASPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVD 292
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLS 340
+ A QE+YI+ DG PISS+AE +RV CL+ AIERR+ EG+ LEL T DR GLLS
Sbjct: 293 TSASGGARQEFYIRSADGSPISSDAEMRRVSLCLQDAIERRSFEGVRLELCTPDRPGLLS 352
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTD-ASGNPVDPKIVDSIQHQIGRTILQVK 399
D+TR RE GL + +AE+ST G + F+VT +G V +D+++ ++G L V+
Sbjct: 353 DVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRSAIDAVREKVGVDSLVVE 412
Query: 400 GNLNTPPKLPQEPARS----------FFFTNFFKGRSFQSFKLIKSCS 437
PP+L Q+ R F+ N FK R+ S LIKS S
Sbjct: 413 ---ERPPQLHQKETRPADRSDGGLGLFYLGNLFK-RNLYSLGLIKSFS 456
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 249/413 (60%), Gaps = 18/413 (4%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
DE+ KL+ RMN PRVVIDN VC AT++QVDS + G+LLE +Q L DL+L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELT 122
DG + MDVF+VTD G+K+ D + I+YI+ + L + P + T++ELT
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDASVIAYIQQS-------LGTWVEPAAAAPPEGLTALELT 117
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G R GLLSEV AVL D+ C V A W H R A + H++ + R+ +I
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDP-ADGDGDGRVSRILA 176
Query: 183 LLCNVLRTNGDLRTPSMSISS---ARVLHGERRLHQMLFAD-RDFERLDCVNYNSRPHVT 238
L ++LR GD ++++ + V H +RRLHQ++ AD + P V+
Sbjct: 177 RLSHLLR--GDGVVAPGAVAAVPASGVAHADRRLHQLMSADLHRAAPVPVPVPALAPAVS 234
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ ++R Y+ VT++ DRPKLLFD C L DM YVV+HGTV T A QE+YI+ DG
Sbjct: 235 VQSWAERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADG 294
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
PI SEAER+ + L+AAIERR+ EG+ LEL DR GLLS++TR RE GL + +AE+
Sbjct: 295 SPIRSEAEREMLTHHLQAAIERRSLEGVRLELCAPDRAGLLSEVTRTFRENGLLVAQAEV 354
Query: 359 STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQE 411
ST G + + F+VTDA+G D +D+++ ++G L V + P+ PQ+
Sbjct: 355 STKGDQACNVFYVTDAAGKAPDRGAIDAVRERVGADRLVV----SEEPRPPQQ 403
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 255/445 (57%), Gaps = 22/445 (4%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+DN C AT++QV S +HG+LL+ + L D + + K YISSB G +
Sbjct: 13 FVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBDGRW 72
Query: 67 LMDVFYVTDINGQKIGDQ-ATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTD 125
MDVF+V D G K+ D A ++ +++++ +A ++ + T +EL G D
Sbjct: 73 FMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAA---GAGTPTLLELVGAD 129
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLLSEV AVL DL C V A WTH R AAL+ V+D+ +G I+D R+ +++ L
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDF----ERLDCVNYNSRP-HVTIL 240
+VLR G M + A ++ +RRLHQ+L D + +R + P V +
Sbjct: 190 HVLR--GGALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQ 247
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
D +R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +D P
Sbjct: 248 DWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERP 307
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
ISS ER+RV+ CLEAAIERRASEG+ LEL DR GLL+ +TR+ RE L + AEI+T
Sbjct: 308 ISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITT 367
Query: 361 MGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL--------PQEP 412
G + F VTD +G P DPK +D + +IG L+V + P+L
Sbjct: 368 RGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRV--DEERWPRLCSTEGDAGRGGG 425
Query: 413 ARSFFFTNFFKGRSFQSFKLIKSCS 437
F ++ S LI+SCS
Sbjct: 426 GAGIFSLGSLVKKNLVSLGLIRSCS 450
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 262/432 (60%), Gaps = 27/432 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E LI R++PPRV IDND TV+++DS NRHGILLE++Q L DL+ VI+K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKE----- 115
SSDGG+LMDVF+VTD +G K+ D+ + YI+ T+ S + S + + E
Sbjct: 69 SSDGGWLMDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+IELT ++ GL SE+SAVL L +V SA WTHN R A ++H++D I + +
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 RLLKIKKLLCNVLRT---NGD---LRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
RL +++ L NV++ NG+ +R S + R H ERRLHQM++AD D+ER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRN-HTERRLHQMMYADGDYERCRAC 246
Query: 230 NYNSR----------PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+ R VT+ ++ Y V +RS+DRPKLLFDTVC LTDMQY V+H
Sbjct: 247 HVGDRNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAA 306
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLL 339
V + A QEY+++ + +E+E+Q++ CL AAIERR S GL++++ ++ GLL
Sbjct: 307 VSSNGSMADQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVSHGLKVDIRAENTTGLL 366
Query: 340 SDITRILREYGLCIRRAEISTMGRKVK-DTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
S +TR++RE GL I + +I ++ +F V ++SG V+P I + ++ + G +++
Sbjct: 367 SKVTRVIRENGLSITKVQIGVESDEMAVGSFCVANSSGQEVNPNIAELVRRETGGSVV-- 424
Query: 399 KGNLNTPPKLPQ 410
N N+P ++P+
Sbjct: 425 -ANYNSPYRVPK 435
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 257/472 (54%), Gaps = 66/472 (13%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F ++ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYT--- 117
SSDGG+LMDVF+VTD G+K+ D + +I+ L + G PS ++T
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQA-------LVPFQRRPGHGPSPKFTTCL 121
Query: 118 ---------------SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
S+E T DRPGLLS ++ VL D C V S + WTH+ RAA +L+V
Sbjct: 122 GNVVGPGGPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYV 181
Query: 163 KDQSSGCA-IEDQKRLLKIKKLLCNVL----RTNGDLRTPSMSISSARVLHGERRLHQML 217
++ A Q R I++L+ V+ +G R MS + +H ERRLHQ++
Sbjct: 182 TMTAAAEAQPPHQSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLM 241
Query: 218 FADRDFERLDCVNYNSRPH-----------------------------VTILDCSDRDYT 248
DRD+E H VTI + +R Y
Sbjct: 242 HDDRDYESGPAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGYA 301
Query: 249 AVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQ 308
V + S+DRPKLLFDTVC LTDMQYVV+H TV + A QEYYI+H DG + S AERQ
Sbjct: 302 VVKMTSRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQ 361
Query: 309 RVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDT 368
+V CL AA+ERRAS G+ +E+ DR GLLSD TRILRE+GL + R E+ + T
Sbjct: 362 KVSRCLVAAVERRASHGVRVEVRAADRSGLLSDFTRILREHGLSLLRVELKRQKDEAVGT 421
Query: 369 FFVTDASGNPVDPKIVDSIQHQIGRTILQV---KGNLNTPP----KLPQEPA 413
F++ SG V P++V +++ ++G + + K PP +P +PA
Sbjct: 422 FYLVTDSGGEVRPEVVRAVRARVGEMGISLEVAKEAPGWPPVRKTSVPVQPA 473
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 240/385 (62%), Gaps = 21/385 (5%)
Query: 35 VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+N++GILLEV+Q L DL+L I KAYI+SDGG+ MDVF+V D GQKI D TI YI+ +
Sbjct: 1 MNKNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKAL 60
Query: 95 ETNASFL-----NSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
++ L N SVG+ ++T+IEL G DR GLLSE+ AVL DL C+V++AE+
Sbjct: 61 GPESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEV 120
Query: 150 WTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRT-----------PS 198
WTH R A +++V D ++G AI+D R+ +I+ L +VLR G +
Sbjct: 121 WTHRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHAN 180
Query: 199 MSISSARVLHGERRLHQMLFADRDFERLDCV---NYNSRPHVTILDCSDRDYTAVTIRSK 255
+ +S+ H +RRLHQ++ AD D + RP VT+ C ++ Y+ V ++ +
Sbjct: 181 FTDASSTPHHLDRRLHQLMHADVDVAPAAALAAGGQGDRPEVTVEHCEEKSYSVVNVKCR 240
Query: 256 DRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLE 315
DR KLLFD VC LTDM+YVV+H V + QE YI+ DG + + E ++V+ LE
Sbjct: 241 DRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRSLE 299
Query: 316 AAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDAS 375
AAI RR SEG LE+ DR GLLSD+TR+LRE+GL + RA+++T G + + F+V D S
Sbjct: 300 AAISRRVSEGFTLEVRGRDRVGLLSDVTRVLREHGLTVSRADVTTEGGQATNVFYVRDPS 359
Query: 376 GNPVDPKIVDSIQHQIGRT-ILQVK 399
G PVD K V+ ++ Q G+T +L VK
Sbjct: 360 GQPVDMKTVEGLRGQFGQTAMLNVK 384
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ DE K+IR + I V E T ++V +R G+L +V + L + L +++A +
Sbjct: 287 LKDEAEKVIRSLEAA---ISRRVSEGFT-LEVRGRDRVGLLSDVTRVLREHGLTVSRADV 342
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
+++GG +VFYV D +GQ + D T+ ++
Sbjct: 343 TTEGGQATNVFYVRDPSGQPV-DMKTVEGLR 372
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 251/451 (55%), Gaps = 53/451 (11%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F ++ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYT--- 117
SSDGG+LMDVF+VTD G K+ D + +I+ + L RS G PS ++T
Sbjct: 69 SSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQ------ALLPFQRSGSG--PSPKFTTCL 120
Query: 118 ---------------SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
S+E T DRPGLLS ++ VL D C V S + WTH+ RAA +L+V
Sbjct: 121 GNVVGPGGPDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYV 180
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVL--RTN--GDLRTPSMSISSARVLHGERRLHQMLF 218
+ A R +I++L+ V+ R N G+ R MS +H ERR+HQ++
Sbjct: 181 TATGADSAALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMH 240
Query: 219 ADRDFERLD----------CVN----------YNSRPHVTILDCSDRDYTAVTIRSKDRP 258
D D+E C+ + + VTI + ++ Y V + S+DRP
Sbjct: 241 DDGDYESSPAPTPVDEEHFCMGDRAATAARSAHRTETRVTIDNWEEKGYAIVKMTSRDRP 300
Query: 259 KLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
KLLFDTVC LTDM YVV+H TV A QEYYI+H DG + S AERQ+V CL AA+
Sbjct: 301 KLLFDTVCALTDMHYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLVAAV 360
Query: 319 ERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
ERRAS G+ +E+ DR GLLSD TR LRE+GL + R EI + TFF+ +G
Sbjct: 361 ERRASHGVRVEVRAADRSGLLSDFTRALREHGLSLLRVEIKRQKEEAIGTFFLVTDTGGE 420
Query: 379 VDPKIVDSIQ---HQIGRTILQVKGNLNTPP 406
V P+ + +++ ++G ++ K PP
Sbjct: 421 VRPEALRAVRTRVAEMGISLDVAKEAFGWPP 451
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 248/450 (55%), Gaps = 43/450 (9%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV---------ETNASFLNSMRSSVGVV 111
SSDGG+LMDVF+VTD G+K+ D + +I+ + + F + + VG
Sbjct: 69 SSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVG-- 126
Query: 112 PS----KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV----K 163
P + ++E T DRPGLLS ++ VL D C V S + WTH+ RAA +L+V
Sbjct: 127 PGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGG 186
Query: 164 DQSSGCAIEDQKRLLKIKKLLCNVL----RTNGDLRTPSMSISSARVLHGERRLHQMLFA 219
++ A R I+ L+ V+ + G+ SMS +H ERRLHQ++
Sbjct: 187 GAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHD 246
Query: 220 DRDFERLDCVNYNSRPH--------------------VTILDCSDRDYTAVTIRSKDRPK 259
DRD+E H V+I +R Y V + S+DRPK
Sbjct: 247 DRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPK 306
Query: 260 LLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319
LLFDTVC LTDM YVV+H TV + A QEYYI+H DG + S AERQ+V CL AA+E
Sbjct: 307 LLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVE 366
Query: 320 RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
RRAS G ++E+ DR GLLSD TR+LRE+GL + R E+ + TF++ +G V
Sbjct: 367 RRASHGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEV 426
Query: 380 DPKIVDSIQHQIGRTILQVKGNLNTPPKLP 409
+ + +++ ++G+ + + + P P
Sbjct: 427 RAEALHAVRARVGKVGISFEVAKDAPGWPP 456
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 203/304 (66%), Gaps = 6/304 (1%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T+ E+TGTDRPGL+SE+SAVL +LSC V +A WTHN+R A ++ ++D+ G I D +
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 176 RLLKIKKLLCNVLRT---NGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVN 230
RL+ +++ L NV+ +G+ R ++ A H +RRLHQ++FAD+D+ER C
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDG 120
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ R V+I +C ++ Y+ V ++S+DRPKLLFDTVC LTDMQYVV+H V + A QE
Sbjct: 121 SSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQE 180
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYG 350
Y+I+ +DG + +E+ER RV CL AAIERR + GL L++ +R GLLSDITR+ RE G
Sbjct: 181 YFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENG 240
Query: 351 LCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
L IR AEI G + +F+VTD SG V P V+ I+ +IG TI+ V + + PP LP
Sbjct: 241 LSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKS-SVPPSLPA 299
Query: 411 EPAR 414
P+R
Sbjct: 300 SPSR 303
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 254/437 (58%), Gaps = 24/437 (5%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
D ++ L R+ RV +DN+ C TV++V+S N+ +LLEV++ L+DL L ITK Y+
Sbjct: 8 FDPDYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYV 67
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP----SKEY 116
SSDGG+ +DVF+V D G K+ ++ ISYI+ + T + ++R S + Y
Sbjct: 68 SSDGGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHY 127
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T IE+ G +RPG+ SE+SAVL + C+V+ A W+H A + V D+S+ I D+ R
Sbjct: 128 TEIEMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNR 187
Query: 177 LLKIKKLLCNVLRT----NGDLRTPSMSISSARVL--HGERRLHQMLFADRDFE------ 224
L I+ L VLR+ + D R+ + L H ERRLHQ++FA RDF+
Sbjct: 188 LATIEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPGQV 247
Query: 225 -------RLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH 277
LD + V++ C+++ Y+ V + DRPKL+FDTVC LTDMQ+ V+H
Sbjct: 248 STAFPMLSLDGYKKDKSTVVSLDRCNEKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVFH 307
Query: 278 GTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDR-F 336
+V + A QEYYI+H DG + + E+ V+ L+AA+ERR EG++LEL T+ +
Sbjct: 308 ASVSSQGPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCEGVKLELCTEKKNV 367
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
G LS ITR+LRE GL + RA+I+ G K+TF+V D SGN +D V+S++ ++
Sbjct: 368 GFLSHITRVLRESGLTVTRADIAMDGDVTKNTFYVKDISGNKIDMNAVESVRRELEPLPF 427
Query: 397 QVKGNLNTPPKLPQEPA 413
QVK L +P PA
Sbjct: 428 QVKDELLSPGLPEGNPA 444
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/409 (42%), Positives = 238/409 (58%), Gaps = 22/409 (5%)
Query: 40 ILLEVIQFLVDLNLVITKAYISSDGG-YLMDVFYVTDINGQKIGD-QATISYIKTTVETN 97
+LLE + L + + + K YISSD G + MDVF+VTD G+K+ D A ++ +++++
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADADALLARLESSLSAE 60
Query: 98 ASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA 157
A R++ G ++ T +EL G DRPGLLSEV AVL DL C+ V A WTH R A
Sbjct: 61 AL----PRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVA 116
Query: 158 ALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD-LRTPSMSISSARVLHGERRLHQM 216
AL+ V+D+ +G I+D R+ +I+ L +VLR RT S+A L +RRLHQ+
Sbjct: 117 ALVFVRDEETGAPIDDAARVRRIESRLRHVLRGGARCARTVLADPSAAGNL--DRRLHQL 174
Query: 217 LFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
L D + + + V + D +R Y+ VT+ +DRPKLLFD VC LTD+ YVVY
Sbjct: 175 LNEDGEADSRGAAPMTA---VAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVY 231
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRF 336
HGT T A QE+YI+ DG PISSEAERQ V+ CL+AAIERRASEG+ LEL DR
Sbjct: 232 HGTFDTDGDHAQQEFYIRRSDGRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRR 291
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
GLL+ +TR+ RE GL + AEI+T + F VTD +G P DPK +D + +IG L
Sbjct: 292 GLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESL 351
Query: 397 QVKGNLNTPPKL--------PQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
+V + P+L + F ++ S LI+SCS
Sbjct: 352 RV--DEERWPRLCSAEGDAAGRGGGGGLFSLGSLVKKNLFSLGLIRSCS 398
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQA-- 85
+V+ V +R +L +V+ L DL+ V+ +DG + FY+ +G+ I +A
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 86 --TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCS 143
I ++ +E AS E +EL +DR GLL+ V+ V + S
Sbjct: 263 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 307
Query: 144 VVSAEIWTHNARAAALLHVKD 164
V AEI T + A + HV D
Sbjct: 308 VTHAEITTRDDMAMNVFHVTD 328
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 222/363 (61%), Gaps = 12/363 (3%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+DN C AT++QV S +HG+LL+ + L D + + K YISSD G +
Sbjct: 13 FVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGDQ-ATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTD 125
MDVF+V D G K+ D A ++ +++++ +A ++ + T +EL G D
Sbjct: 73 FMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAA---GAGTPTLLELVGAD 129
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLLSEV AVL DL C V A WTH R AAL+ V+D+ +G I+D R+ +++ L
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDF----ERLDCVNYNSRP-HVTIL 240
+VLR G M + A ++ +RRLHQ+L D + +R + P V +
Sbjct: 190 HVLR--GGALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQ 247
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP 300
D +R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +D P
Sbjct: 248 DWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERP 307
Query: 301 ISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
ISS ER+RV+ CLEAAIERRASEG+ LEL DR GLL+ +TR+ RE L + AEI+T
Sbjct: 308 ISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITT 367
Query: 361 MGR 363
GR
Sbjct: 368 RGR 370
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 261/483 (54%), Gaps = 69/483 (14%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R+ P VV+DN+ E T+++VDSVNR G+LL+++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGD--------QATISYIKTTVETNASFLNSMRSSVGVVP 112
SDGG+LMDVF+VTD G+K+ D +A + + +T + F + + VG P
Sbjct: 69 CSDGGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVG--P 126
Query: 113 SKEYTS----IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+ S +E T DRPGLLS +++VL D C V S + WTHN RAA +L+V
Sbjct: 127 AGPDVSGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVTPPLP- 185
Query: 169 CAIEDQKRLLKIKKLLCNVL--RTN--GDLRTPSMSISSARVLHGERRLHQMLFADRDFE 224
R ++++L+ V+ R N G+ +S + +H ERRLHQ++ DRD+E
Sbjct: 186 ------SRWARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYE 239
Query: 225 RLDC----------------------VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLF 262
+ V++ +R Y V + S+DRP LLF
Sbjct: 240 SGPAPTPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLF 299
Query: 263 DTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRA 322
DTVC LTDMQYVV+H TV + + A QEYYI+H DG + S AERQ+V CL AA+ERRA
Sbjct: 300 DTVCALTDMQYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVSRCLVAAVERRA 359
Query: 323 SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
+ G+ +E++ DR GLLSD TR+LRE+GL + R E+ + F++ +G V +
Sbjct: 360 THGVRVEVHAADRSGLLSDFTRVLREHGLSLLRVELKRHRDEAFGVFYLDTDTGGEVRTE 419
Query: 383 IVDSIQHQIGRTILQV---------------KGNLNTPP---KLPQEPAR----SFFFTN 420
+ ++Q ++ + + K ++ PP + PQE R S ++N
Sbjct: 420 ALRAVQMRVAEMGISLDVVKETKAPGWPPVRKTSVPAPPVAGQQPQEKPRPSLGSLLWSN 479
Query: 421 FFK 423
K
Sbjct: 480 LEK 482
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 246/453 (54%), Gaps = 49/453 (10%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV---------ETNASFLNSMRSSVGVV 111
SSDGG+LMDVF+VTD G+K+ D + +I+ + + F + + VG
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVG-- 126
Query: 112 PS----KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
P + ++E T DR GLLS +++VL D C V S + WTHN RAA +L+V ++
Sbjct: 127 PGGPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAA 186
Query: 168 GCAIED-------QKRLLKIKKLLCNVL--RTN--GDLRTPSMSISSARVLHGERRLHQM 216
+ R +I++L+ V+ R N G+ +S +H ERRLHQ+
Sbjct: 187 ATTADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQL 246
Query: 217 LFADRDFERLDC--------------------VNYNSRPHVTILDCSDRDYTAVTIRSKD 256
+ DRD+E + V+I +R Y V + S+D
Sbjct: 247 MHDDRDYESGPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVVKMTSRD 306
Query: 257 RPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEA 316
RP+LLFDTVC LTDMQYVV+H TV + A QEYYI+H DG + S AERQ+V CL A
Sbjct: 307 RPRLLFDTVCALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSAERQKVSRCLVA 366
Query: 317 AIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
A+ERRA+ G+ +E+ DR GLLSD TR+LRE+GL + R E+ F++ +G
Sbjct: 367 AVERRATHGVRVEVRAADRSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTG 426
Query: 377 NPVDPKIVDSIQHQIGRTILQ---VKGNLNTPP 406
V + + ++Q ++ + VK PP
Sbjct: 427 GEVRAEALRAVQARVAEMDISLDVVKEAPGWPP 459
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 244/414 (58%), Gaps = 37/414 (8%)
Query: 44 VIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN--ASFL 101
++Q L DL+LVI+K YISSDG + MDVF+VTD G K+ D++ I YI+ + ++
Sbjct: 1 MVQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGIT 60
Query: 102 NSMRSSVGVVP-----SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARA 156
M+S++ S E+T+ E+TG +RPGLLSE+SAVL+D+ C V +A WTH+ RA
Sbjct: 61 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERA 120
Query: 157 AALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN---GDLRTPSMSISSARVL-----H 208
A +++++D +G I D R ++K L V+ + GD+ + + A+ + H
Sbjct: 121 AMVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAH 180
Query: 209 GERRLHQMLFADRDFER-LDCVNYN-----------SRPHVTILDCSDRDYTAVTIRSKD 256
ERRLH++++ + D+E DC + R HVTI C+ Y+ V ++ +D
Sbjct: 181 TERRLHELMYGEGDYENCFDCDCFGDRCDALWRGRCERIHVTIEACNG--YSMVNVKCRD 238
Query: 257 RPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEA 316
RPKLLFDTVC L ++Q+VV+H A QEY+I+ +G + +E +R+R+ CL A
Sbjct: 239 RPKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVA 298
Query: 317 AIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
AI RRAS+GL+LE+ T+++ GLLSD+TR++RE GL I RAE+ T G +F+VTD +G
Sbjct: 299 AISRRASQGLKLEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNG 358
Query: 377 NPVDPKIVDSIQHQIGRTILQVKGNLNTPPK--------LPQEPARSFFFTNFF 422
P V+++ ++G ++ + P+ + Q+ A+S F+
Sbjct: 359 GETGPSEVEAVVRELGGAVVSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFW 412
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 30 IQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISY 89
+++ + N+ G+L +V + + + L IT+A + + G + FYVTD+NG + G S
Sbjct: 310 LEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGP----SE 365
Query: 90 IKTTVETNASFLNSMRSSVGVVPSK 114
++ V + S VG++P +
Sbjct: 366 VEAVVRELGGAVVSAVKGVGMMPRR 390
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 239/424 (56%), Gaps = 58/424 (13%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E LI R+ PPRV IDND TV+++DS NRHGILLE+ Q L DL+LVI+K+YISSD
Sbjct: 12 EIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKSYISSD 71
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKE-----YTS 118
GG+LMDVF+VTD +G K+ D + YI+ + + S + S + + E +
Sbjct: 72 GGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLA 131
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IELT TD+ G+ SE+SAVL L +V SA WTHN R A ++H++D + I + +RL
Sbjct: 132 IELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLA 190
Query: 179 KIKKLLCNVLRT----NGD---LRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
+++ L NV++ NG+ +R S R H ERRLHQM++AD D+ERL +
Sbjct: 191 QVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRN-HTERRLHQMMYADGDYERLRACHG 249
Query: 232 N---SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEA 287
+V++ + Y V +RS+DRPKL FDTVC LTDMQY V+H V + G M
Sbjct: 250 EKGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNGSM-- 307
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILR 347
A +GL++++ ++ GLLS +TR++R
Sbjct: 308 ----------------------------------ADQGLKVDIRAENTTGLLSKVTRVIR 333
Query: 348 EYGLCIRRAEISTMGRKVK-DTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPP 406
E GL I + +I G ++ +F V ++SG ++P I + ++ QIG +++ N N+P
Sbjct: 334 ENGLSITKVQIGVEGDEMAVGSFHVANSSGQELNPNIAELVRRQIGGSVV---ANNNSPY 390
Query: 407 KLPQ 410
++P+
Sbjct: 391 RVPK 394
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 190/290 (65%), Gaps = 6/290 (2%)
Query: 130 LSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
+SE+SAVL +LSC V +A WTHN+R A ++ ++D+ G I D +RL+ +++ L NV+
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 T---NGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL--DCVNYNSRPHVTILDCSD 244
+G+ R ++ A H +RRLHQ++FAD+D+ER C + R V+I +C +
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGSSDRIQVSIENCKE 120
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSE 304
+ Y+ V ++S+DRPKLLFDTVC LTDMQYVV+H V + A QEY+I+ +DG + +E
Sbjct: 121 KGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTLGTE 180
Query: 305 AERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
+ER RV CL AAIERR + GL L++ +R GLLSDITR+ RE GL IR AEI G +
Sbjct: 181 SERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGER 240
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPAR 414
+F+VTD SG V P V+ I+ +IG TI+ V + + PP LP P+R
Sbjct: 241 ASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKS-SVPPSLPASPSR 289
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
+V I+N + +V+ V S +R +L + + L D+ V+ A +SS G + +++
Sbjct: 112 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 171
Query: 76 INGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSA 135
++G +G ++ + + + ++ V +++ +R GLLS+++
Sbjct: 172 MDGCTLGTESERNRVAQC------LIAAIERRV-----THGLRLDIRIKNRLGLLSDITR 220
Query: 136 VLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLR 195
V + S+ AEI H RA+ +V D S + L++ K++ ++ N
Sbjct: 221 VFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIR-KEIGGTIMAVNKSSV 279
Query: 196 TPSMSISSAR 205
PS+ S +R
Sbjct: 280 PPSLPASPSR 289
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 82/489 (16%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMD---------VFYVTDINGQKIGDQATISYIKTTV---------ETNASFLN 102
SSDGG+LMD +F+VTD G+K+ D + +I+ + + F
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 103 SMRSSVGVVPS----KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+ + VG P + ++E T DRPGLLS ++ VL D C V S + WTH+ RAA
Sbjct: 129 CLGNVVG--PGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAG 186
Query: 159 LLHV----KDQSSGCAIEDQKRLLKIKKLLCNVL----RTNGDLRTPSMSISSARVLHGE 210
+L+V ++ A R I+ L+ V+ + G+ SMS +H E
Sbjct: 187 VLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTE 246
Query: 211 RRLHQMLFADRDFERLDCVNYNSRPH--------------------VTILDCSDRDYTAV 250
RRLHQ++ DRD+E H V+I +R Y V
Sbjct: 247 RRLHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVV 306
Query: 251 TIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRV 310
+ S+DRPKLLFDTVC LTDM YVV+H TV + A QEYYI+H DG + S AERQ+V
Sbjct: 307 KMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKV 366
Query: 311 MACLEAAIERRAS------------------------------EGLELELYTDDRFGLLS 340
CL AA+ERRAS +G ++E+ DR GLLS
Sbjct: 367 SRCLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLS 426
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKG 400
D TR+LRE+GL + R E+ + TF++ +G V + + +++ ++G+ + +
Sbjct: 427 DFTRMLREHGLSLLRVELKRRKDEAVGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEV 486
Query: 401 NLNTPPKLP 409
+ P P
Sbjct: 487 AKDAPGWPP 495
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 82/489 (16%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMD---------VFYVTDINGQKIGDQATISYIKTTV---------ETNASFLN 102
SSDGG+LMD +F+VTD G+K+ D + +I+ + + F
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 103 SMRSSVGVVPS----KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+ + VG P + ++E T DRPGLLS ++ VL D C V S + WTH+ RAA
Sbjct: 129 CLGNVVG--PGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAG 186
Query: 159 LLHV----KDQSSGCAIEDQKRLLKIKKLLCNVL----RTNGDLRTPSMSISSARVLHGE 210
+L+V ++ A R I+ L+ V+ + G+ SMS +H E
Sbjct: 187 VLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTE 246
Query: 211 RRLHQMLFADRDFERLDCVNYNSRPH--------------------VTILDCSDRDYTAV 250
RRLHQ++ DRD+E H V+I +R Y V
Sbjct: 247 RRLHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVV 306
Query: 251 TIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRV 310
+ S+DRPKLLFDTVC LTDM YVV+H TV + A QEYYI+H DG + S AERQ+V
Sbjct: 307 KMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKV 366
Query: 311 MACLEAAIERRAS------------------------------EGLELELYTDDRFGLLS 340
CL AA+ERRAS +G ++E+ DR GLLS
Sbjct: 367 SRCLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLS 426
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKG 400
D TR+LRE+GL + R E+ + TF++ +G V + + +++ ++G+ + +
Sbjct: 427 DFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEV 486
Query: 401 NLNTPPKLP 409
+ P P
Sbjct: 487 AKDAPGWPP 495
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 28/356 (7%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+D+ VC AT++QV S +HG+LLE + L + + + K YISSD G +
Sbjct: 13 FVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTD 125
MDVF+VTD G+K+ D A ++ +++++ A R++ G ++ T +EL G D
Sbjct: 73 FMDVFHVTDAAGRKVADADALLARLESSLSAEAL----PRAAAGGPAAEGLTLLELVGAD 128
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RP WTH R AAL+ V+D+ +G I+D R+ +I+ L
Sbjct: 129 RPASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLR 172
Query: 186 NVLRTNGD-LRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSD 244
+VLR RT S+A L +RRLHQ+L D + + + V + D +
Sbjct: 173 HVLRGGARCARTVLADPSAAGNL--DRRLHQLLKEDGEADSRGAAPMTA---VAVQDWGE 227
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSE 304
R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ DG PISSE
Sbjct: 228 RGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSE 287
Query: 305 AERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEIST 360
AERQ V+ CL+AAIERRASEG+ LEL DR GLL+ +TR+ RE GL + AEI+T
Sbjct: 288 AERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITT 343
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQA-- 85
+V+ V +R +L +V+ L DL+ V+ +DG + FY+ +G+ I +A
Sbjct: 231 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 290
Query: 86 --TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCS 143
I ++ +E AS E +EL +DR GLL+ V+ V + S
Sbjct: 291 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 335
Query: 144 VVSAEIWTHN 153
V AEI T +
Sbjct: 336 VTHAEITTRD 345
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTM-GRKVKDTFFVTDASGNPV 379
+++++ + G+L + L E+G+C+R+ IS+ GR D F VTDA+G V
Sbjct: 35 VQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKV 87
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 201/320 (62%), Gaps = 12/320 (3%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-Y 66
+R MN PRVV+D+ VC AT++QV S +HG+LLE + L + + + K YISSD G +
Sbjct: 13 FVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDDGRW 72
Query: 67 LMDVFYVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTD 125
MDVF+VTD G+K+ D A ++ +++++ A R++ G ++ T +EL G D
Sbjct: 73 FMDVFHVTDAAGRKVADADALLARLESSLSAEAL----PRAAAGGPAAEGLTLLELVGAD 128
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLLSEV AVL DL C+ V A WTH R AAL+ V+D+ +G I+D R+ +I+ L
Sbjct: 129 RPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLR 188
Query: 186 NVLRTNGD-LRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSD 244
+VLR RT S+A L +RRLHQ+L D + + + V + D +
Sbjct: 189 HVLRGGARCARTVLADPSAAGNL--DRRLHQLLKEDGEADSRGAAPMTA---VAVQDWGE 243
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSE 304
R Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ DG PISSE
Sbjct: 244 RGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSE 303
Query: 305 AERQRVMACLEAAIERRASE 324
AERQ V+ CL+AAIERRASE
Sbjct: 304 AERQHVIRCLQAAIERRASE 323
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEIST-MGRKVKDTFFVTDASGNPV 379
+++++ + G+L + L E+G+C+R+ IS+ GR D F VTDA+G V
Sbjct: 35 VQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKV 87
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 209/379 (55%), Gaps = 16/379 (4%)
Query: 68 MDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRP 127
MDVF+V D G K+ D + +E++ S + T +EL G DRP
Sbjct: 1 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAGAGTPTLLELVGADRP 57
Query: 128 GLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNV 187
GLLSEV AVL DL C V A WTH R AAL+ V+D+ +G I+D R+ +++ L +V
Sbjct: 58 GLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHV 117
Query: 188 LRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDF-ERLDCVNYNSRPHVTILDCSDRD 246
LR G M + A ++ +RRLHQ+L D + R D + V + D +R
Sbjct: 118 LR--GGALGARMVRADAAAVNMDRRLHQLLNEDGEAGSRADQAEAPTPTAVAVQDWGERG 175
Query: 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAE 306
Y+ VT+ +DRPKLLFD VC LTD+ YVVYHGT T A QE+YI+ +D PISS E
Sbjct: 176 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPISSATE 235
Query: 307 RQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVK 366
R+RV+ CL+AAIERRASEG+ LEL +DR GLL+ +TR+ RE L + A I+T G
Sbjct: 236 RRRVIQCLQAAIERRASEGVRLELRINDRRGLLAYVTRVFRENSLSVTHAVITTRGDMAM 295
Query: 367 DTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKL--------PQEPARSFFF 418
+ F VTD +G P DPK +D + +IG L+V + P+L F
Sbjct: 296 NVFHVTDVAGRPADPKTIDEVIQRIGTESLRV--DEERWPRLCSTEGDAGRGGGGAGIFS 353
Query: 419 TNFFKGRSFQSFKLIKSCS 437
++ S LI+SCS
Sbjct: 354 LGSLVKKNLVSLGLIRSCS 372
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 15 PRVVIDNDVCEHA-TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V D E +V+ V +R +L +V+ L DL+ V+ +D + FY+
Sbjct: 163 PTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYI 222
Query: 74 TDINGQKIGD----QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGL 129
++ + I + I ++ +E AS E +EL DR GL
Sbjct: 223 RRLDERPISSATERRRVIQCLQAAIERRAS---------------EGVRLELRINDRRGL 267
Query: 130 LSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
L+ V+ V + S SV A I T A + HV D
Sbjct: 268 LAYVTRVFRENSLSVTHAVITTRGDMAMNVFHVTD 302
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 168/228 (73%), Gaps = 10/228 (4%)
Query: 216 MLFADRDFERLDCVNYN--SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQY 273
M+FADRD+ER+D +++ RP+VT+++ SD+DY+ VTI SKDRPKLLFDTVC LTDMQY
Sbjct: 1 MMFADRDYERVDDDDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQY 60
Query: 274 VVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD 333
VV+H + +AYQEYYI+H+DG P+ S+AERQRV+ CLEAAIERR SEGL+LEL T
Sbjct: 61 VVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTT 120
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++TRI RE L + RAE++T G K +TF+V+ ASG VD K ++SI+ IG
Sbjct: 121 DRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQAIGN 180
Query: 394 TILQVKGNLNTPPKLPQ----EPARSFFFTNFFKGRSFQSFKLIKSCS 437
TIL+VKG TP +L P RS F+ FK RSF +F L+KS S
Sbjct: 181 TILKVKG---TPDELKSTHQDSPTRS-LFSGLFKSRSFVNFGLVKSYS 224
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DD+F + R P V + N + +V+ + S +R +L + + L D+ V+ A I
Sbjct: 13 DDDFDEKQR----PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANID 68
Query: 62 SDGGYLMDVFYVTDINGQKIGD----QATISYIKTTVETNASFLNSMRSSVGVVPSKEYT 117
++G +Y+ I+G + Q I ++ +E S E
Sbjct: 69 AEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVS---------------EGL 113
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+EL TDR GLLS V+ + + S +V AE+ T +A +V +SG + D K +
Sbjct: 114 KLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVS-GASGYLV-DSKTI 171
Query: 178 LKIKKLLCN-VLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDF 223
I++ + N +L+ G TP + S R L LF R F
Sbjct: 172 ESIRQAIGNTILKVKG---TPD-ELKSTHQDSPTRSLFSGLFKSRSF 214
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 178/242 (73%), Gaps = 5/242 (2%)
Query: 157 AALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQM 216
A+++++ D+++G +I+D RL KIK+LL VL+ + D ++ + ++S H +RRLHQ+
Sbjct: 2 ASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGST-HKDRRLHQL 60
Query: 217 LFADRDFERLDCVNYNSRPH----VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQ 272
++ADRD++ D + ++ VT+ DC D+ YT V +R DRPKLLFDTVC LTDMQ
Sbjct: 61 MYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQ 120
Query: 273 YVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYT 332
YVVYHGTV+ EAYQEYYI+HVDG PISSEAERQRV+ CLEAA+ RR SEG++LEL
Sbjct: 121 YVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCG 180
Query: 333 DDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
+DR GLLSD+TRI RE GL + RAE++T G + + F+VTD SGNPV + +++++ +IG
Sbjct: 181 EDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIG 240
Query: 393 RT 394
T
Sbjct: 241 LT 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
N V +D+ + + TV+ + +R +L + + L D+ V+ + ++G +Y
Sbjct: 81 NKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYY 140
Query: 73 VTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSE 132
+ ++G I +A + +E R+S G+ +EL G DR GLLS+
Sbjct: 141 IRHVDGSPISSEAERQRVIHCLEAAVR----RRTSEGI-------KLELCGEDRVGLLSD 189
Query: 133 VSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
V+ + + SV AE+ T ++A + +V D S
Sbjct: 190 VTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSG 224
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 209/373 (56%), Gaps = 66/373 (17%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+ +F L+ R P VV+DN+ E T+++VDSVNR G+LLE++Q L DL+LVI+K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYT--- 117
SSDGG+LMDVF+VTD G+K+ D + +I+ + + + R G PS +T
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQR------ALVPTHRPGNG--PSPRFTTCL 120
Query: 118 ---------------SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
++E T DRPGLLS +++VL D C V S + WTHN RAA +L+V
Sbjct: 121 GNVVGPGGPDVSGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYV 180
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVL--RTN--GDLRTPSMSISSARVLHGERRLHQMLF 218
D + G A+ R +I++L+ V+ R N G+ +S + +H ERRLHQ++
Sbjct: 181 TDTAGGAALL-PGRCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMH 239
Query: 219 ADRDFERLDCVNYNSRPHVTILD---------------------------CSDRDYTAVT 251
DRD+E S P T +D +R Y V
Sbjct: 240 DDRDYE--------SGPAPTPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVK 291
Query: 252 IRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVM 311
+ S+DRP+LLFDTVC LTDMQYVV+H TV + A QEYYI+H DG + + AERQ+V
Sbjct: 292 MTSRDRPRLLFDTVCALTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVS 351
Query: 312 ACLEAAIERRASE 324
CL AA+ERRA+
Sbjct: 352 RCLVAAVERRATH 364
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 169/239 (70%), Gaps = 11/239 (4%)
Query: 208 HGERRLHQMLFADRDFE--RLDCVN---YNSR-PHVTILDCSDRDYTAVTIRSKDRPKLL 261
H ERRLHQM++ADRD++ L+C + Y R P VT+ +CS++ YTAV +R DRPKLL
Sbjct: 1 HTERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERR 321
FD VC LTDMQYVVYH TV+ EAYQEY+I+H+DG PISSEAERQR++ CLEAAI+RR
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRR 120
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
SEG+ LEL ++DR GLLSD+TRI RE GL + RAE++T G + + F+V D+SG PV
Sbjct: 121 TSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKS 180
Query: 382 KIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
+ +++++++IG+TIL VK + + K P + + F FK RS L+KS S
Sbjct: 181 ETIEAVRNEIGKTILHVKQDDYS--KSPPQESGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 14 PPR---VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
PPR V ++N + T + + +R +L + + L D+ V+ A + ++G
Sbjct: 30 PPRTPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQE 89
Query: 71 FYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLL 130
+++ I+G I +A + +E R+S G+ +EL DR GLL
Sbjct: 90 YFIRHIDGCPISSEAERQRLIHCLEAAIK----RRTSEGI-------RLELCSEDRVGLL 138
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
S+V+ + + SV AE+ T ++A + +V D SSG ++ +
Sbjct: 139 SDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVID-SSGYPVKSE 181
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 166/239 (69%), Gaps = 11/239 (4%)
Query: 208 HGERRLHQMLFADRDFERL-----DCVNYNSR-PHVTILDCSDRDYTAVTIRSKDRPKLL 261
H ERRLHQ+++ADRD++ D Y R P VT+ +CS++ YTAV +R DRPKLL
Sbjct: 1 HTERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERR 321
FD VC LTDMQYVVYH TV+ EAYQEY+I+H+DG PISSEAERQR++ CLEAAI+RR
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRR 120
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
SEG+ LEL ++DR GLLSD+TRI RE GL + RAE++T G + + F+V D+SG PV
Sbjct: 121 TSEGIRLELCSEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKS 180
Query: 382 KIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRS---FQSFKLIKSCS 437
+ +++++++IG+TIL VK + + K P + + F FK RS L+KS S
Sbjct: 181 ETIEAVRNEIGKTILHVKQDDYS--KSPPQESGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 14 PPR---VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
PPR V ++N + T + + +R +L + + L D+ V+ A + ++G
Sbjct: 30 PPRTPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQE 89
Query: 71 FYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLL 130
+++ I+G I +A + +E R+S G+ +EL DR GLL
Sbjct: 90 YFIRHIDGCPISSEAERQRLIHCLEAAIK----RRTSEGI-------RLELCSEDRIGLL 138
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
S+V+ + + SV AE+ T ++A + +V D SSG ++ +
Sbjct: 139 SDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVID-SSGYPVKSE 181
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 187/321 (58%), Gaps = 22/321 (6%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+AKL+R MNPPRVV+DN+ C+ ATVI+VDSV+ HG LL V+Q + DL LVI KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIEL 121
SDG + MDVF VTD +G K+ D TISYI+TT+E + + +R++VG+VP++EYT IEL
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ-SSGCAIEDQKRLLKI 180
TGTDRPGLLSEV AVL + C+V SAE+WTHN R AA++HV D SG AIED+ R+ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KKLLCNVLRTNGDL--RTPSMSISSARVLH----------GERRLHQMLFADRDFERLDC 228
L N+LR L T V+H G + + + D D R +
Sbjct: 195 STRLGNLLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEA 254
Query: 229 VNYNSRPHV-----TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG 283
R V ++ D A+ +R+ DR LL D + + + +
Sbjct: 255 ----ERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSE 310
Query: 284 RMEAYQEYYIKHVDGFPISSE 304
R EA +Y+ G P+ ++
Sbjct: 311 RGEAVDTFYLSDPQGHPVEAK 331
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 127/192 (66%), Gaps = 12/192 (6%)
Query: 255 KDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEAYQEYYIKHVDGFPISSEAERQRVMAC 313
+ + LLFDTVC +TDM YV++HG V + R AYQEYYI+HVDG P+ SEAERQRV+ C
Sbjct: 203 RGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQC 262
Query: 314 LEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
LEAAIERR ++GL LE+ T DR GLLSD+TRI RE GL IRRAEIS+ + DTF+++D
Sbjct: 263 LEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSD 322
Query: 374 ASGNPVDPKIVDSIQHQIGRTILQVKGN----------LNTPPKLPQEPARSFFFTNFFK 423
G+PV+ K +D+I+ QIG L+VK N + +F F N FK
Sbjct: 323 PQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGATDDVAGSTAFLFGNLFK 382
Query: 424 -GRSFQSFKLIK 434
R FQ+F LIK
Sbjct: 383 FYRPFQNFSLIK 394
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 227/380 (59%), Gaps = 11/380 (2%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
++ L R+NP ++ IDND + T I++DS N G L+EV+Q+++ LNL I +A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIK--TTVETNASFLNS-MRSSVGVVPSKEYTSIE 120
+ DVF VT++NG+K+ + + ++K +E F N+ G E T +E
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEEGIFSNAGAMGHEGASGPTESTVVE 120
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G D+ G L++V+ +LT+ C+V SA +WT+ R A +L V ++ G I DQ +L +
Sbjct: 121 LAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLEK--GKPIADQVKLQGL 178
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD--RDFERLDCVNYNS-RPHV 237
++++ +++ G+ + + + V+H +R LHQM+ A+ R +++ + +P++
Sbjct: 179 RQIMLDIMGPEGE-GISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHSTHAARLKPNI 237
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG-RMEAYQEYYIKHV 296
+I+ C Y ++I KDR KLLFDTVC L DM+Y VYHGT+ + A QEYY K
Sbjct: 238 SIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINSHPDGSATQEYYAKPR 297
Query: 297 DGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356
G P + A +++ A LEA+I+RR +GL+L +++ D FG L+ +T +LR+ GL I RA
Sbjct: 298 WGRPWDARAA-EKLAAMLEASIQRRFPKGLKLHVHSVDSFGSLATLTGVLRDAGLTINRA 356
Query: 357 EISTMGRKVKDTFFVTDASG 376
+ ++ TF+V DASG
Sbjct: 357 KTNSANNVCGHTFYVMDASG 376
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 188/312 (60%), Gaps = 19/312 (6%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+D E L R++PPRV IDND C + TV+++D N+HGILLE++Q L DL+L+I+K+YI
Sbjct: 28 IDREIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYI 87
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKT-----TVETNASFLNSMRSSVGVVPSKE 115
SSDGG+LMDVF+V D G K+ D++ +++I+ T ++N + P +
Sbjct: 88 SSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEA 147
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+IE+ GTDRPGL SE+S VL DL +++SA+ WTHN + +++ +D S I +++
Sbjct: 148 NVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERE 207
Query: 176 RLLKIKKLLCNVLRTN-----GDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
RL ++ + NV+ N D+R+ + S+ H ERRLHQM++A D+E +
Sbjct: 208 RLAQVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACH 267
Query: 231 YNSRP---------HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVV 281
++ HV++ RDY V +RS+DRPKLLFD VC LTDMQY V+H V
Sbjct: 268 GDNDSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVT 327
Query: 282 TGRMEAYQEYYI 293
+ A Q + I
Sbjct: 328 SNSPMAEQVHRI 339
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 199/338 (58%), Gaps = 30/338 (8%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S E+T+ E+TG +RPGLLSE+SAVL+D+ C V +A WTH+ RAA +++++D +G I
Sbjct: 98 STEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPII 157
Query: 173 DQKRLLKIKKLLCNVLRTN---GDLRTPSMSISSARVL-----HGERRLHQMLFADRDFE 224
D R ++K L V+ + GD+ + + A+ + H ERRLH++++ + D+E
Sbjct: 158 DPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYE 217
Query: 225 R-LDCVNYN-----------SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQ 272
DC + R HVTI C+ Y+ V ++ +DRPKLLFDTVC L ++Q
Sbjct: 218 NCFDCDCFGDRCDALWRGRCERIHVTIEACNG--YSMVNVKCRDRPKLLFDTVCALKELQ 275
Query: 273 YVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYT 332
+VV+H A QEY+I+ +G + +E +R+R+ CL AAI RRAS+GL+LE+ T
Sbjct: 276 FVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRT 335
Query: 333 DDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
+++ GLLSD+TR++RE GL I RAE+ T G +F+VTD +G P V+++ ++G
Sbjct: 336 ENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELG 395
Query: 393 RTILQVKGNLNTPPK--------LPQEPARSFFFTNFF 422
++ + P+ + Q+ A+S F+
Sbjct: 396 GAVVSAVKGVGMMPRRIGSTSDSVEQDKAKSSIGRMFW 433
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 30 IQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISY 89
+++ + N+ G+L +V + + + L IT+A + + G + FYVTD+NG + G S
Sbjct: 331 LEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGP----SE 386
Query: 90 IKTTVETNASFLNSMRSSVGVVPSK 114
++ V + S VG++P +
Sbjct: 387 VEAVVRELGGAVVSAVKGVGMMPRR 411
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 155/229 (67%), Gaps = 14/229 (6%)
Query: 208 HGERRLHQMLFADRDFER---------LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRP 258
H +RRLHQMLFADRD+ER +DC + RP + I C ++ Y+AV+++ KDR
Sbjct: 31 HMDRRLHQMLFADRDYERASVTTTTPDVDC-PLSFRPKIEIERCGEKGYSAVSVKCKDRA 89
Query: 259 KLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
KL+FD VC LTDMQYVV+H T+ + A QEY+I+H+DG + +E E++RV C+EAAI
Sbjct: 90 KLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIEAAI 149
Query: 319 ERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
+RR SEG+ LEL DR GLLS++TRILRE+GL + RA +ST+G K + F+V DA GNP
Sbjct: 150 QRRVSEGVSLELCAKDRVGLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRDAYGNP 209
Query: 379 VDPKIVDSIQHQIGRTIL----QVKGNLNTPPKLPQEPARSFFFTNFFK 423
VD KI+++++ +IG+T++ +V N P + SFFF N +
Sbjct: 210 VDMKIIEALRKEIGQTVMVNVKRVPTNAKAPAETRGWAKISFFFGNLLE 258
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P++ I+ + + + V +R ++ +++ L D+ V+ A ISS+G Y +++
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVS 134
++G + + + +E R S GV S+EL DR GLLSEV+
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEAAIQ----RRVSEGV-------SLELCAKDRVGLLSEVT 174
Query: 135 AVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK-----LLCNVLR 189
+L + +V A + T + + +V+D + G + D K + ++K ++ NV R
Sbjct: 175 RILREHGLTVCRAGVSTVGEKGLNVFYVRD-AYGNPV-DMKIIEALRKEIGQTVMVNVKR 232
Query: 190 TNGDLRTPSMSISSARV 206
+ + P+ + A++
Sbjct: 233 VPTNAKAPAETRGWAKI 249
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 221/458 (48%), Gaps = 87/458 (18%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E+ L R++PP VV+DN+ T+I +DS NR G L+EV+Q L +L L +TKA ISSD
Sbjct: 122 EYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSD 181
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV--PSKEYTSIEL 121
GG+ +D F+VTD G+K+ +V+T+ + + VGV S+ T EL
Sbjct: 182 GGWFVDEFHVTDA-GKKV----------LSVDTDPG--SDAEADVGVFEEASQCSTVFEL 228
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVV--------SAEIWTHNARAAALLHVKD--------- 164
G DR GLL+EV A+L + C V SA +WTHN R A ++ V +
Sbjct: 229 AGNDRIGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGA 288
Query: 165 ----------QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLH 214
C I+D +L ++++LL ++ +G +++ + ++H ERRLH
Sbjct: 289 VAAPAPGGGVGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATTKG-LIHYERRLH 347
Query: 215 QMLFADRDFE----------RLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDT 264
Q+L + + + + +P V+I +Y ++IR +DR KLLFDT
Sbjct: 348 QLLLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLFDT 407
Query: 265 VCCLTDMQYVVYHGTV--VTGRMEAY--------QEYYIKHVDGFPISSEAERQRVMACL 314
VC L D+ Y VYHG V R A+ Q +Y++ G + ++ L
Sbjct: 408 VCTLADLNYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKYML 467
Query: 315 EAAIERRASEGLELEL-------------------YTDDRFGLLSDITRILREYGLCIRR 355
E AI+RR G ++ + T D L +T + R++GLCI R
Sbjct: 468 EVAIQRRQPTGTKVHISGVPASAAAAASGAGGGGGATSD----LPALTAVWRDFGLCISR 523
Query: 356 AEISTM-GRKVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
A++ + G + TF++ D +G P +V + QIG
Sbjct: 524 AKVRALAGAAGEHTFYLVDRNGLPPADTVVQAACQQIG 561
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 135/225 (60%), Gaps = 5/225 (2%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E+ L R++PP V IDN+ T+I +DS NR G L+EV+Q L +L L + KA ISSD
Sbjct: 45 EYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSD 104
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV---PSKEYTSIE 120
GG+ +D F VTD G+K+ ++ + I+ + +A + S V S+ T E
Sbjct: 105 GGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFE 163
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G DR GLL++V +L C V SA +WTHN R A ++ V D S+G I+D +L ++
Sbjct: 164 LAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARL 223
Query: 181 KKLLCNVLRTNGDLRTPSMSISSAR-VLHGERRLHQMLFADRDFE 224
++LL N++ T GD+ +++S+ + ++H ERRLHQ+L + + +
Sbjct: 224 RQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV--------VTGRM 285
+P V + RDY V IR +DR KLLFDTVC L D+ Y VYHG V ++
Sbjct: 504 KPEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKV 563
Query: 286 E-AYQEYYI--KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL---- 338
A Q +Y+ ++ D + +A + + M LE AI+RR +G ++ + G
Sbjct: 564 SIAVQTFYMRPRYGDAYWDPRKAAKLKYM--LECAIQRRQPQGTKVHIQGAPSSGSGGSG 621
Query: 339 ------LSDITRILREYGLCIRRAEISTM-GRKVKDTFFVTDASGNPVDPKIVDSIQHQI 391
L +T + R++GLCI RA++ + G + TF++ D G P +V QI
Sbjct: 622 GAPAADLPALTAVWRKFGLCITRAKVRALAGSAGEHTFYLVDNFGRPPAEAVVQQACQQI 681
Query: 392 G 392
G
Sbjct: 682 G 682
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P+V I + + D T +T+ S +RP L + V LT++ V + + E+ +
Sbjct: 56 PNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSDGGWFVDEFSVT 115
Query: 295 HVDGFPISSEAERQRVMACL--------------EAAIERRASEGLELELYTDDRFGLLS 340
G +++E + + + L ++A E + EL +DR GLL+
Sbjct: 116 DA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFELAGNDRIGLLA 174
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTDAS-GNPVDPKIVDSIQHQIGRTILQVK 399
D+ +L+ G +R A + T + V D S G P+ I + Q+ ++
Sbjct: 175 DVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARLRQLLLNMMHTP 234
Query: 400 GNL 402
G++
Sbjct: 235 GDV 237
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 125/234 (53%), Gaps = 23/234 (9%)
Query: 70 VFYVTDINGQKIGDQATISYIKTTVETNAS--FLNSMRSSVGVVP--SKEYTSIELTGTD 125
VF+V D G K+ + I+YI+ + T S F + + + P + YT IE+ G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPG+ SE+SAVL + C+V+ A W+H A + V D+S+ I D RL I+ LC
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVL----RTNGDLRTPSMSISSARVL--HGERRLHQMLFADRDFE-------------RL 226
VL + D R + L H ERRLHQ++FA +DF+ L
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPGQVSAAFPMLSL 197
Query: 227 DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
D SR V++ C+++ Y+ +++ DRPKL+FDTVC LTDMQ+ V+H +V
Sbjct: 198 DGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASV 251
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 87 ISYIKTTVETNAS-FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
+ +I +E+NA F+ +RSSVGV+P+ EYTSIEL GTDRPGLLSEVSAVLTDL C+VV
Sbjct: 47 VEFIAQRIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVV 106
Query: 146 SAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMS 200
+AEIWTHN RAAA++HV D S+ AI D RL IK+LLCNVL + + R +S
Sbjct: 107 NAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVLELSAEDRVGLLS 161
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 246 DYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEA 305
+YT++ + DRP LL + LTD+ V + + T A ++ ++
Sbjct: 76 EYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDP 135
Query: 306 ERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKV 365
R + L + LEL +DR GLLSDITR RE L I RAEIST K
Sbjct: 136 IRLSTIKELLCNV---------LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKA 186
Query: 366 KDTFFVTDASGNPVDPKIVDSIQHQ 390
KDTF+VTD +GNPV+ KIV+SI+ Q
Sbjct: 187 KDTFYVTDVTGNPVESKIVESIRQQ 211
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQK-IGDQAT 86
T I++ +R G+L EV L DL+ + A I + V +VTD + I D
Sbjct: 78 TSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIR 137
Query: 87 ISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVS 146
+S IK + +EL+ DR GLLS+++ + S ++V
Sbjct: 138 LSTIKELL---------------------CNVLELSAEDRVGLLSDITRTFRENSLTIVR 176
Query: 147 AEIWTHNARAAALLHVKD 164
AEI T +A +V D
Sbjct: 177 AEISTREGKAKDTFYVTD 194
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 78/98 (79%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
MD+E+ KLIRRMNPPRVVIDND C+ ATVI+VDS N +GILLEV+Q L DLNL ITKAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA 98
SSDGG+ MDVF VTD +G K+ D+ + YI+ ++ A
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA 104
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
+ +G+L ++ +IL + L I +A IS+ G D F VTD GN V D ++D IQ +G
Sbjct: 42 NEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 101
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 80/106 (75%)
Query: 332 TDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQI 391
T+DR GLLSDITRI RE LCI+RAEIST K KDTF+VTD +G+PVDPKI+DSI+ QI
Sbjct: 1 TEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQI 60
Query: 392 GRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRSFQSFKLIKSCS 437
G T+LQVK N + PK PQ F +FFK RSFQ+FKLI+S S
Sbjct: 61 GDTVLQVKHNSSLSPKPPQGTKIGFLLGSFFKARSFQNFKLIRSYS 106
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMD-VFYVTD 75
V IDN C T+I+VDS+N+ GILLEV+Q L DL+L+ITKAY+SSDGG+ MD VF+ TD
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 76 INGQKIGDQATISYIKTTVETNASFLNSMR----SSVGVVPSKEYTSIELTGTDRPGLLS 131
G KI D+ TI YI+ + N + ++ VG+ +YT+IELTG DRPGLLS
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVSAVLTDL 140
E+SAVL L
Sbjct: 121 EISAVLAGL 129
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 10/127 (7%)
Query: 254 SKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMAC 313
KDRP LL + LTD++ + + +EYYI+H+D P++S ER R+ C
Sbjct: 136 GKDRPGLLSEVFAVLTDLKCNIV----------SSEEYYIRHLDDSPVTSGDERDRLGRC 185
Query: 314 LEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
LEAAI+RR +EGL LELY +DR GLLSD+TRI RE+GL + AE++T G + + F+V
Sbjct: 186 LEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVA 245
Query: 374 ASGNPVD 380
ASG PV+
Sbjct: 246 ASGEPVE 252
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 89/157 (56%), Gaps = 18/157 (11%)
Query: 3 DEFAKLIRRMNPPRVVIDNDVCEHATVIQ--------VDSVNRHGILLEVIQFLVDLNLV 54
DEF KL+ RMNPPRV +DN AT+++ VDS N++G LLEV+Q L +L L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 ITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA-SFLNSMRSSVGVVPS 113
I +AYISSDG + MD + K+ D I I+ ++ + SF SV +
Sbjct: 72 IKRAYISSDGEWFMDGW-------NKLYDGLVIDRIELSLGAGSLSFRAPPERSVELEAE 124
Query: 114 KEYTSIE--LTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
L G DRPGLLSEV AVLTDL C++VS+E
Sbjct: 125 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 161
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF K + RMNPPRV +DN+ + T+I+VDS N+ G LLEV+Q L D+NL + +AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD NG K+ + I+ ++ S R SVGV + E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSLGPRTCSFRSKR-SVGVQSAVEHTTIE 128
Query: 121 L 121
L
Sbjct: 129 L 129
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
++ G L ++ ++L + L +RRA IS+ G D F VTD +GN + + + + IQ +G
Sbjct: 45 NKRGSLLEVVQVLNDMNLHVRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSLG 104
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 1 MDDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
+DDEF K + RMNPPRV +DN+ + T+I+VDS N+ G LLEV+Q L D+NL I +AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYI 69
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
SSDG + MDVF+VTD +G K+ + I+ ++ S R SVGV + E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRTRSFRSKR-SVGVQSAVEHTTIE 128
Query: 121 L 121
L
Sbjct: 129 L 129
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
++ G L ++ ++L + L IRRA IS+ G D F VTD GN + + + + IQ +G
Sbjct: 45 NKRGSLLEVVQVLNDMNLHIRRAYISSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLG 104
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 49/245 (20%)
Query: 11 RMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
R++PP + IDN + T + +DS NR G L+ ++Q +L+L IT A ISSDGG+ +DV
Sbjct: 463 RVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDV 522
Query: 71 FYVTDINGQKIGDQATISYIKTTVET----------NASFLNSMRSSVGVVPSKEYTSIE 120
F++++ NG+K+ + + IK + N + M E T E
Sbjct: 523 FHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMN-------RIETTVFE 575
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKI 180
L G DRPGLL+EV+ +LT C+V SA +WT+ R A +L + ++ G + D +L ++
Sbjct: 576 LAGPDRPGLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITEK--GLPVVDGIKLQRL 633
Query: 181 KKLLCNVLRTNGDLRTPSMSISSARV-------------------------LHGERRLHQ 215
++L+ ++ R P S S+ + +H +RRLHQ
Sbjct: 634 RQLVLGIM-----TRRPGPSDSNGALAAMGGGGLGPGSAGVIVNIRKVRGEIHHDRRLHQ 688
Query: 216 MLFAD 220
++ +
Sbjct: 689 LMLQE 693
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 312 ACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMG--RKVKDTF 369
A LE++I+RR +GL++ +++ DRFG L+ +TR+L + GL + RA++ T + TF
Sbjct: 826 AMLESSIQRRFPKGLKVHVHSLDRFGCLAALTRVLHQTGLSVTRAKVRTYATSKSSGHTF 885
Query: 370 FVTDASGNPVDPKIVDSIQHQIGRTILQV 398
+V DA G P D V++ +IG +++
Sbjct: 886 YVMDARGGPPDKARVEAACREIGGQLVEA 914
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 111 bits (278), Expect = 6e-22, Method: Composition-based stats.
Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
+DG + ++ E++RV+ +EAAI RR SEG+ LEL DR GLLS++TRILRE GL + R
Sbjct: 1 MDGCTLDTQGEKERVIQRIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCR 60
Query: 356 AEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS 415
A +ST G + + F+V DASGNPVD K +++++ +IG+T++ + + K P+ R
Sbjct: 61 AGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPE--TRG 118
Query: 416 FFFTNFFKGRSFQSF 430
+ T+FF G + F
Sbjct: 119 WAKTSFFFGNLLERF 133
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E+ L R++PP VVIDN+ E TVI +DS NR G L+EV+Q L +L L I A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI-ELT 122
GG+ +D F+VT+ KI DQ I+ I+ + + R KE ++ EL
Sbjct: 105 GGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTAR-------DKELCTVFELA 157
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GLL+ V +L C V+SA +WT + R A ++ ++ G + D +L ++++
Sbjct: 158 GRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPPKLDRLEQ 215
Query: 183 LLCNVL 188
+L ++L
Sbjct: 216 ILYDML 221
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
H T+L+ Y VTIR +DR KL FDTVC L DM Y +YH T+ + A Q +Y++
Sbjct: 555 HSTLLN-----YWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRP 609
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRR 355
G + E ++ LE+A++RR G ++ + + DR L++ + L G I R
Sbjct: 610 RYGECVWDERRAAKLRYMLESAVQRRFPRGTKVCVQSGDRSSLVA-LFSALSSGGFWITR 668
Query: 356 AEISTMGR-KVKDTFFVTDASGNPVDPKIVDSIQHQIG 392
A++ G F +TD G + V I +G
Sbjct: 669 ADVRAHGHDNAVFEFTITDTRGQLPEQTHVQRICEAVG 706
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 10/189 (5%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E+ L R++PP VVIDND + TVI +DS NR G L+EV+Q L +L L I A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI-ELT 122
GG+ +D F+VT+ K+ D I+ I+ + + S + K+ ++ EL
Sbjct: 105 GGWFVDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYK-------DKDICTVFELA 157
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DR GLL+ V +L C V+SA +WT + R A ++ ++ G + D +L ++++
Sbjct: 158 GRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQ 215
Query: 183 LLCNVLRTN 191
+L ++L +
Sbjct: 216 ILYDMLGSG 224
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
R V I + +Y VTI+ +DR KL FDTVC L DM Y +YH T+ + A Q +Y+
Sbjct: 607 RSEVRIQHSALLNYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYV 666
Query: 294 KHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCI 353
+ G I E ++ LE+A++RR G ++ + + DR L+ ++ L G I
Sbjct: 667 RPRYGECIWDERRAAKLRYMLESAVQRRFPRGTKVCVQSSDRSALV-NLFSALSSAGFWI 725
Query: 354 RR 355
R
Sbjct: 726 TR 727
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LEL T DR GLLSD+TRI RE GL + RA++ST G K + F+VTDASGNPVD +IV++
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEAT 61
Query: 388 QHQIGRTILQVKGNLNTPPKLPQEPARS--FFFTNFF 422
+ +IG++ILQVK + P E A F F F
Sbjct: 62 RKEIGQSILQVKDLTPSSPNSQHEVASKSRFSFGTFL 98
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDS 386
+LEL T+D+ GLLS++TRI RE L + RAE+ST GR +TF+V D++G VD K +DS
Sbjct: 1 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDS 60
Query: 387 IQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRSFQSFKLI 433
I+ IG+ I QVKG +E F F N F+ RS SF +
Sbjct: 61 IRQAIGQNI-QVKGQPEPSEPQKKESPTWFLFANLFRPRSLYSFGMF 106
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
+EL D+ GLLSEV+ + + S +V AE+ T A +V+D + G DQK +
Sbjct: 2 LELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTV--DQKTID 59
Query: 179 KIKKLLCNVLRTNGD 193
I++ + ++ G
Sbjct: 60 SIRQAIGQNIQVKGQ 74
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMS----ISSARVLHGERRLHQMLFADRDFERLDC 228
D +R+ +I+ L ++L +GD + S + +A V H ERRLHQ++ DRD E +
Sbjct: 97 DTERMARIEAHLGHLL--HGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQE--ER 152
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
+ RP V++ C +R Y+ VT++ + RPKLL D VC LTDM YVV+H T+ T +A+
Sbjct: 153 ATTSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAH 212
Query: 289 QEYY 292
QE +
Sbjct: 213 QESH 216
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 252 IRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVM 311
I+S ++ +L D V L D ++ + + + +++ DG ++ E +
Sbjct: 3 IQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDHIQ 62
Query: 312 ACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFV 371
+G LEL D+ G LSD TRI RE GL + RA+I++ K D F+V
Sbjct: 63 ------------QGTRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGVDVFYV 110
Query: 372 TDASGNPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARSFFFTNFFKGRS 426
TD +GN VD K V++I+ +IG+ LQVK + PQE + +F F + FK +S
Sbjct: 111 TDVAGNFVDSKTVEAIRQEIGKRALQVKESSMHVDSSPQESS-AFSFGDLFKSQS 164
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 23/135 (17%)
Query: 30 IQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISY 89
+Q+ S N+HGILL+++Q LVD +L+I+KAYISSDG ++MDVF+VTD +G K+ D+ I +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 90 IKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
I ++ T +EL TD+ G LS+ + + + SV A+I
Sbjct: 61 I-----------------------QQGTRLELCRTDQIGPLSDATRIFRENGLSVTRADI 97
Query: 150 WTHNARAAALLHVKD 164
+ + + + +V D
Sbjct: 98 TSRDEKGVDVFYVTD 112
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++ + ++ G+L DI ++L ++ L I +A IS+ G V D F VTD+ GN V D ++D
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 387 IQH 389
IQ
Sbjct: 61 IQQ 63
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 200 SISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPK 259
++ +A V H ERRLHQ++ DRD E + + RP V++ C +R Y+ VT++ + RPK
Sbjct: 26 TVPAASVAHAERRLHQLMSPDRDQE--ERATTSPRPAVSVQSCVERGYSVVTVQCRYRPK 83
Query: 260 LLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
LL D VC LTDM YVV+H T+ T +A+QE +
Sbjct: 84 LLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 135 AVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL 194
AVL+DL+C VV A++WTHN R A +++++D SSG I D +R+ KI+ L NVL + D+
Sbjct: 3 AVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDNDV 62
Query: 195 RTPSMS-ISSARVLHGERRLHQMLFADRDFER 225
+ + + +S ++H E RLHQ++F RD+ER
Sbjct: 63 NSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 200 SISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPK 259
++ + V H ERRLHQ++ DRD E + + RP V++ C +R Y+ VT++ + RPK
Sbjct: 26 TVPATSVAHAERRLHQLMSPDRDQE--ERATTSPRPAVSVQSCVERGYSVVTVQCRYRPK 83
Query: 260 LLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
LL D VC LTDM YVV+H T+ T +A+QE +
Sbjct: 84 LLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLLSE+ AVLTD C+VV++E+WTHN+R A+++++ D+++G I+D RL I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLCNVLRTNGDLRTPSMSIS 202
LL +VL + D R+ + ++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 59/80 (73%)
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLLSE+ AVL D C+VV++E+WTHN+R A+++++ D+++G I+D RL I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLCNVLRTNGDLRTPSMSIS 202
LL +VL + D R+ + ++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 9/159 (5%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPK-LLFDTVCCLTDMQYVVYHG 278
D ER+ V+ N + V I + S D T V + S ++ +L D + LTDM + +
Sbjct: 15 DAHSERIYMVHRNCQ--VCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKS 72
Query: 279 TVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGL 338
+ + EY+I+H++G+ +++ +E+++++ +EAAIERR E ++LEL D+ G
Sbjct: 73 YISS------DEYFIRHINGYALNTTSEKEQLIKFIEAAIERRVCESVKLELSADNSVGF 126
Query: 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
LSDI+R+LRE L I RA I+ V F+ S N
Sbjct: 127 LSDISRVLRENSLVIVRAFINLFSSLVFWRNFILMVSIN 165
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 26/139 (18%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRH-GILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
+V IDN+ E TV++VDSVN+H G+LL+++ L D+N I K+YISSD +++
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSDE------YFIR 82
Query: 75 DINGQKIG----DQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLL 130
ING + + I +I+ +E E +EL+ + G L
Sbjct: 83 HINGYALNTTSEKEQLIKFIEAAIERRVC---------------ESVKLELSADNSVGFL 127
Query: 131 SEVSAVLTDLSCSVVSAEI 149
S++S VL + S +V A I
Sbjct: 128 SDISRVLRENSLVIVRAFI 146
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 200 SISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPK 259
++ +A V H ERRLHQ++ DRD E + + RP V++ C +R Y+ VT++ + RPK
Sbjct: 26 TVPAASVAHAERRLHQLMSPDRDQE--ERATTSPRPAVSVQSCVERGYSVVTVQCRYRPK 83
Query: 260 LLFDTVCCLTDMQYV 274
LL D VC LTDM YV
Sbjct: 84 LLLDVVCTLTDMDYV 98
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V ID D +ATV++V +R G LL+ ++ L DL L + KA + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M + G+VP KE ++++
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH 219
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL E+ L+D+S +V S E T A A HV + S
Sbjct: 220 IYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYRGSA 279
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
+ +++++ N LR LR P+ SS
Sbjct: 280 L-------IKPLQQVVANSLRYF--LRRPTTEESS 305
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E+T DR G L + L DL +VV A ++ ++ + +G ++D +
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LLKIK-KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
L +I+ ++ N+L+ + + SSA++ GE F + V+ ++R
Sbjct: 173 LEQIRLTIINNLLKYHPE--------SSAQLAMGEA------FGIVPPKEKPDVDISTRI 218
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
H+ D +R + ++I + DRP LL + V L+D+ V G T + A ++++ +
Sbjct: 219 HI-YDDGPNR--SLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSY 275
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V ID D +ATV++V +R G LL+ + L DL L + KA + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M + G+VP KE ++++
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEKPDVDISTRIH 219
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL E+ L+D+S +V S E T A A HV + S
Sbjct: 220 IYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYRGSA 279
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
+ +++++ N LR LR P+ SS
Sbjct: 280 L-------IKPLQQVVANSLRYF--LRRPTTEESS 305
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E+T DR G L + L DL +VV A ++ ++ + +G ++D +
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LLKIK-KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
L +I+ ++ N+L+ + + SSA++ GE F + V+ ++R
Sbjct: 173 LEQIRLTIINNLLKYHPE--------SSAQLAMGEA------FGIVPPKEKPDVDISTRI 218
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
H+ D +R + ++I + DRP LL + V L+D+ V G T + A ++++ +
Sbjct: 219 HI-YDDGPNR--SLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSY 275
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 15/69 (21%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DDE+ K I+ MNPPRV IDN C A VI V L +L L++TKAYIS
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVIHV---------------LTNLKLIVTKAYIS 68
Query: 62 SDGGYLMDV 70
SDGG+ MDV
Sbjct: 69 SDGGWFMDV 77
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P++ +DN + TVI+V+ ++R G+L ++ + DL+L I A+IS+ G ++D FYVT
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSK 114
D+ G K+ +A I+ I+ +++ SSV +PS+
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSVLESAEGEVSSVNAMPSQ 956
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI-VDSIQHQIG 392
DR GLL+DIT + + L IR A IST G K+ D F+VTD G V + + I+ ++
Sbjct: 878 DRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDLIGAKVTSEAKIARIERRLQ 937
Query: 393 RTILQVKGNLNTPPKLPQEPARSFFF 418
+ +G +++ +P + A F +
Sbjct: 938 SVLESAEGEVSSVNAMPSQSAFGFHY 963
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
++ T I++ D P L+S+++ ++ ++I+T + RA ++ + A E
Sbjct: 757 RQVTRIKVLAPDHPRLVSQLAGACAGAKANIADSQIFTLTDGRALDVMTISR-----AFE 811
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
+++ ++ + +C + ++L GE + +++ R R D +
Sbjct: 812 NEEDEMRRARRICENIE---------------KLLRGETIMSRLIGQSRGTRRADL--FE 854
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
+P +T+ + T + + DR LL D ++D+ + + T + +Y
Sbjct: 855 VKPKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFY 914
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEG 325
+ + G ++SEA+ R+ L++ +E ++EG
Sbjct: 915 VTDLIGAKVTSEAKIARIERRLQSVLE--SAEG 945
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T IE+ G DR GLL++++ ++DLS + SA I T+ + +V D G +
Sbjct: 866 SNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDL-IGAKVT 924
Query: 173 DQKRLLKIKKLLCNVLRT 190
+ ++ +I++ L +VL +
Sbjct: 925 SEAKIARIERRLQSVLES 942
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID + AT++Q+ NR G LL+ ++ L DL L ++K +S++G F++T
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKEY-----TSIE 120
+ G+K+ D + I+ T+ N +S L +M G+ P K+ T I+
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 121 ------------LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+ DRPGLL E+ V+ D++ V SAEI T A HV G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHV--SYGG 253
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LRTP I S
Sbjct: 254 AALNSS-----MSQVLVNCLRYY--LRTPETDIDS 281
>gi|297600649|ref|NP_001049552.2| Os03g0247900 [Oryza sativa Japonica Group]
gi|255674366|dbj|BAF11466.2| Os03g0247900 [Oryza sativa Japonica Group]
Length = 177
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
+G+ LEL DR GLL+ +TR+ RE GL + AEI+T + F VTD +G P DPK
Sbjct: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
Query: 384 VDSIQHQIGRTILQV 398
+D + +IG L+V
Sbjct: 118 IDEVIQRIGTESLRV 132
>gi|302784983|ref|XP_002974263.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
gi|302807877|ref|XP_002985632.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300146541|gb|EFJ13210.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300157861|gb|EFJ24485.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
Length = 210
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 23/171 (13%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VVID D H TV++V +R G LL+ ++ L DL L + K + G + F +T
Sbjct: 8 PIVVIDQDADPHTTVVEVSFGDRLGALLDTMKSLRDLGLTVVKGNVKMVGNTRRNRFSIT 67
Query: 75 DI-NGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKE-----YTSIEL 121
NG+K+ D + I+ T+ N +S +M + G+ P K+ + +I+
Sbjct: 68 RADNGRKVEDPELLESIRLTIIDNLLKYHPESSARLAMGEAFGIKPPKKQEIQTFITIKE 127
Query: 122 TGT----------DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
G+ D+PGL+ E+ ++ D+S SV SAE+ T A HV
Sbjct: 128 DGSDKSLLTIETADKPGLMIEILKIINDISVSVESAEMDTEGLIAKDKFHV 178
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 9/101 (8%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPR I N + +VI+V+ ++R G+L E+ L DL+L I A+I++ G ++D FYV
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSK 114
TD+ GQKI + A I+ I+ + M + G+VP +
Sbjct: 893 TDLTGQKIDNPARIATIRNRL---------MATLEGIVPER 924
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ + S ++ IE+ G DRPGLLSE++ L+DLS + SA I T + +V D
Sbjct: 835 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL 188
+G I++ R+ I+ L L
Sbjct: 895 L-TGQKIDNPARIATIRNRLMATL 917
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
F I AE + ++ + IE EGL DR GLLS+IT L + L I A I
Sbjct: 830 FKIPPRAEIRNTLSNRFSVIE---VEGL-------DRPGLLSEITGTLSDLSLDIASAHI 879
Query: 359 STMGRKVKDTFFVTDASGNPVD-PKIVDSIQHQIGRTI 395
+T G KV DTF+VTD +G +D P + +I++++ T+
Sbjct: 880 TTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLMATL 917
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P++ T + + D PGL ++++ + S+V A I T N A L ++D ++G
Sbjct: 776 LPARGVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQD-ATGE 834
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTP-SMSISSARVLHGERRLHQMLFADRDFERLDC 228
A ++ RL K+ + L D+ T + + +S ++L R +H
Sbjct: 835 AFDEPHRLTKLFSITERALSGRLDIATEIAKTNASGQLLSRTRAIH-------------- 880
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
P V I + + +T + I +DRP LL D L +M+ +Y + T + A
Sbjct: 881 ----VPPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAV 936
Query: 289 QEYYIKHVDGFPISSEAE----RQRVMACLEAAIERRASEGL-ELELYTDD 334
+Y+K + G ++ E R R+MA L+ +E + G E EL D+
Sbjct: 937 DVFYVKDLSGMKVTDENRLKKIRDRLMAGLK-KVEASLNSGFHEPELTADE 986
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVVIDN TVI+++ +R G+L +V L ++ L I A+I++ G +DVFYV
Sbjct: 882 PPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV 941
Query: 74 TDINGQKIGDQATISYIK 91
D++G K+ D+ + I+
Sbjct: 942 KDLSGMKVTDENRLKKIR 959
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS-DGGYLMDVFYVTDINGQKIGDQAT 86
T + + + + G+ ++ + I A I + G +D ++ D G+ +
Sbjct: 782 TEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEAFDEPHR 841
Query: 87 ISYIKTTVE---------------TNASF-LNSMRSSVGVVP--------SKEYTSIELT 122
++ + + E TNAS L S ++ V P S +T IE+
Sbjct: 842 LTKLFSITERALSGRLDIATEIAKTNASGQLLSRTRAIHVPPRVVIDNRASNSHTVIEIN 901
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLL +V++ L ++ + SA I T+ RA + +VKD SG + D+ RL KI+
Sbjct: 902 GRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDL-SGMKVTDENRLKKIRD 960
Query: 183 LLCNVLR 189
L L+
Sbjct: 961 RLMAGLK 967
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ RAS +E+ DR GLL D+ L E L I A I+T G + D F+V D SG
Sbjct: 887 IDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDLSG 946
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
V D + I+ ++ + +V+ +LN+ P+
Sbjct: 947 MKVTDENRLKKIRDRLMAGLKKVEASLNSGFHEPE 981
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D +AT+++V +R G L++ ++ L DL L + K +S++G FY+T
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIE------ 120
++ G+K+ D + I+ T+ N +S +M + G+ P ++ ++
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 121 ------------LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
L DRPGLL EV +L D++ V SAEI T A HV G
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHV--SYGG 258
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + +++ N LR LR P I S
Sbjct: 259 AALNSS-----LSQVVVNCLRYY--LRRPETDIDS 286
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G L++ ++ L DL L ++K +S++G F++T
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKEY-----TSIE 120
N G+K+ D + I+ T+ +N +S +M G+ P K+ T I+
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 121 ------------LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+ DRPGLL E+ V+ D++ V SAEI T A HV G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHV--SYGG 253
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LRTP I S
Sbjct: 254 AALNSS-----MSQVLVNCLRYY--LRTPETDIDS 281
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN + TVI+++ +R G+L ++ + L +L I+ A+I++ G
Sbjct: 842 RRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D A +++I+ ++
Sbjct: 902 RAVDVFYVRDLLGMKITDAARLAHIRASL 930
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P + T + + D PGL S+++ L S+V A I T + A V+D + GC
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQD-ADGC 803
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
+ ED +L ++ L+ L DL IS AR RR+ +
Sbjct: 804 SFEDPHQLGRLNHLVEQALSGRLDLEK---GISEARHRGASRRMRAI------------- 847
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + +T + I +DR LL D L+ + + T M A
Sbjct: 848 --HVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVD 905
Query: 290 EYYIKHVDGFPISSEAERQRVMACL 314
+Y++ + G I+ A + A L
Sbjct: 906 VFYVRDLLGMKITDAARLAHIRASL 930
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 52 NLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVE-------------TNA 98
++V + + SDG +D F+V D +G D + + VE + A
Sbjct: 777 SIVDARIHTLSDG-MALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGISEA 835
Query: 99 SFLNSMRS--SVGVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
+ R ++ V P S +T IE+ G DR GLL +++ L+ S + SA
Sbjct: 836 RHRGASRRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAH 895
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
I T+ RA + +V+D G I D RL I+ L + L
Sbjct: 896 ITTYGMRAVDVFYVRDL-LGMKITDAARLAHIRASLLDTL 934
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL DITR L + L I A I+T G + D F+V D G
Sbjct: 866 IEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLG 914
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D +AT+++V +R G L++ ++ L DL L + K +S++G FY+T
Sbjct: 77 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 136
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIE------ 120
++ G+K+ D + I+ T+ N +S +M + G+ P ++ ++
Sbjct: 137 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 196
Query: 121 ------------LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
L DRPGLL EV +L D++ V SAEI T A HV G
Sbjct: 197 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHV--SYGG 254
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + +++ N LR LR P I S
Sbjct: 255 AALNSS-----LSQVVVNCLRYY--LRRPETDIDS 282
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPR I N + +VI+V+ ++R G+L E+ + L DL+L I A+I++ G ++D FYV
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 TDINGQKIGDQATISYIK 91
TD+ GQKI A I+ I+
Sbjct: 893 TDLTGQKIDSPARIATIR 910
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
F I AE + ++ + IE EGL DR GLLS+ITR L + L I A I
Sbjct: 830 FKIPPRAEIRNALSNRFSVIE---VEGL-------DRPGLLSEITRTLSDLSLDIASAHI 879
Query: 359 STMGRKVKDTFFVTDASGNPVD-PKIVDSIQHQIGRTI 395
+T G KV DTF+VTD +G +D P + +I++++ T+
Sbjct: 880 TTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLIATL 917
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ + S ++ IE+ G DRPGLLSE++ L+DLS + SA I T + +V D
Sbjct: 835 RAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL 188
+G I+ R+ I+ L L
Sbjct: 895 L-TGQKIDSPARIATIRNRLIATL 917
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TVI+V+ +R G+L ++ + L LNL I A IS+ G +DVFYV
Sbjct: 841 PPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYV 900
Query: 74 TDINGQKIGDQATISYIK 91
DI G K+ +A ++ I+
Sbjct: 901 KDIFGLKVAHEAKLTQIR 918
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE+ G DRPGLL +++ LT L+ + SA+I T+ A + +VKD G +
Sbjct: 851 SAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVKD-IFGLKVA 909
Query: 173 DQKRLLKIKKLLCNVL 188
+ +L +I+K L VL
Sbjct: 910 HEAKLTQIRKELLAVL 925
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 25/210 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQS-SGC 169
P + T + + D GL S ++ + +V A I T N A + ++ SG
Sbjct: 736 PGRSVTEVTIYTADHAGLFSRLAGAMALAGGDIVDARITTMTNGMALDVFSLQGAGPSGA 795
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
+ ++ ++K + L GD++ A L R+
Sbjct: 796 RFDSGEKRSRLKSSVEKAL--AGDIKLAPELAKRASPLPSRTRV---------------- 837
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V + + + YT + + +DRP LL+D LT + + + T A
Sbjct: 838 -FRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVD 896
Query: 290 EYYIKHVDGFPISSEAE----RQRVMACLE 315
+Y+K + G ++ EA+ R+ ++A L+
Sbjct: 897 VFYVKDIFGLKVAHEAKLTQIRKELLAVLD 926
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
++ +AS G +E+ DR GLL D+TR L L I A+IST G D F+V D G
Sbjct: 846 VDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVKDIFG 905
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 68 MDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRP 127
MDVF+VTD G+K+ D + I+YI+ + L + P + T++ELTG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQS-------LGTWVEPAAAAPPEGLTALELTGPGRA 53
Query: 128 GLLSEVSAVLTDLSCSVVSAEIW 150
GLLSEV AVL D+ C V A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPR I N + +VI+V+ ++R G+L E+ L DL+L I A+I++ G ++D FYV
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 TDINGQKIGDQATISYIK 91
TD+ GQKI + A I+ I+
Sbjct: 893 TDLTGQKIDNPARIATIR 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ + S ++ IE+ G DRPGLLSE++ L+DLS + SA I T + +V D
Sbjct: 835 RAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL 188
+G I++ R+ I+ L L
Sbjct: 895 L-TGQKIDNPARIATIRNRLIATL 917
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 299 FPISSEAERQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358
F I AE + ++ + IE EGL DR GLLS+IT L + L I A I
Sbjct: 830 FKIPPRAEIRNALSNRFSVIE---VEGL-------DRPGLLSEITGTLSDLSLDIASAHI 879
Query: 359 STMGRKVKDTFFVTDASGNPVD-PKIVDSIQHQIGRTI 395
+T G KV DTF+VTD +G +D P + +I++++ T+
Sbjct: 880 TTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLIATL 917
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVVIDN TV++++ +R G+L ++ + D L I A+I++ G +DVFYV
Sbjct: 849 PPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 74 TDINGQKIGDQATISYIKTTV-------ETNASFLNSMRSSVGV 110
D+ G KI D+A + I+ T+ E NA+ L S +V +
Sbjct: 909 KDLFGLKITDKARLETIRQTLLAGLQKAEANATRLTSALDTVTI 952
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 24/212 (11%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S ++ + S+V A I T N A L V+D + G
Sbjct: 744 IPARGVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTNGMALDTLWVQD-ADGA 802
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ ++L ++ L+ L ++ S R +H
Sbjct: 803 AFEEPQQLARLSMLVEQALSGQLNISKEIASCGRRGSGRRMRAIH--------------- 847
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
P V I + + T V I +DRP LL D ++D + + + T + A
Sbjct: 848 ---VPPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVD 904
Query: 290 EYYIKHVDGFPISSEAE----RQRVMACLEAA 317
+Y+K + G I+ +A RQ ++A L+ A
Sbjct: 905 VFYVKDLFGLKITDKARLETIRQTLLAGLQKA 936
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID + AT++Q+ +R G LL+ ++ L DL L ++K +S++G F++T
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKEY-----TSIE 120
+ G+K+ D + I+ T+ N +S L +M G+ P K+ T I+
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 121 ------------LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+ DRPGLL E+ V+ D++ V SAEI T A HV G
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHV--SYGG 254
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LRTP I S
Sbjct: 255 AALNSS-----MAQVLVNCLRYY--LRTPETDIDS 282
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVV+DN + TVI+++ +R G+L ++ + L +L I+ A+I++ G
Sbjct: 842 RRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVG 109
+DVFYV D+ G KI D A +++I+ ++ ++ + L +S+
Sbjct: 902 RAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKKSAAA 945
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 105 RSSVGV----VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAAL 159
RS V V +P + T + + D PGL S+++ L S+V A I T + A
Sbjct: 735 RSPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDT 794
Query: 160 LHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFA 219
V+D + GC+ ED +L ++ L+ L DL I+ AR RR+ +
Sbjct: 795 FWVQD-ADGCSFEDPHQLGRLNHLVEQALSGRLDLEK---GIAEARHRGASRRMRAI--- 847
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+ P V + + + +T + I +DRP LL D L+ +
Sbjct: 848 ------------HVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAH 895
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEA 305
+ T M A +Y++ + G I+ A
Sbjct: 896 ITTYGMRAVDVFYVRDLLGMKITDPA 921
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 52 NLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVG-- 109
++V + + SDG +D F+V D +G D + + VE S + +
Sbjct: 777 SIVDARIHTLSDG-MALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGIAEA 835
Query: 110 -------------VVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
V P S +T IE+ G DRPGLL +++ L+ S + SA
Sbjct: 836 RHRGASRRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAH 895
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
I T+ RA + +V+D G I D RL I+ L + L
Sbjct: 896 ITTYGMRAVDVFYVRDL-LGMKITDPARLAHIRDSLLSSL 934
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR GLL DITR L + L I A I+T G + D F+V D G + DP +
Sbjct: 866 IEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGMKITDPARLAH 925
Query: 387 IQHQI--GRTILQVKGNLNTP 405
I+ + T L VK + P
Sbjct: 926 IRDSLLSSLTPLPVKKSAAAP 946
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAERQR-----VMACLE------AAIERRASEGLE------------ 327
Y + DG I R R ++ L+ A I+RR L+
Sbjct: 749 YIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTISN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I RI E+ L ++ A+I+T+G +V+D FFVTDA+ P+
Sbjct: 809 DAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTDANNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
DP++ +Q I + Q G +P ++
Sbjct: 869 SDPELCRRLQDAIVSQLSQANGQGQSPTRV 898
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND TV+++ + +R G+L + + ++ +L + A I++ G + DVF+V
Sbjct: 801 PPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSS 107
TD N Q + D ++ + + S N S
Sbjct: 861 TDANNQPLSDPELCRRLQDAIVSQLSQANGQGQS 894
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D+ ATV+++ +R G LL+ ++ L DL L + KA + D + F +T
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M ++ G++P KE +++
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHIN 206
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ +TD+ +V S E T A A HV + G
Sbjct: 207 ISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYK--G 264
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI ++++L N LR LR P+ SS
Sbjct: 265 KAISK-----PLQQVLANSLRYF--LRRPATEESS 292
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L DL +VV A ++ ++ + +G +ED
Sbjct: 98 DATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDP 157
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N L + +++ +A L + + V+ +
Sbjct: 158 ELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPK---------------EQVDVDIA 202
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
H+ I D D + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 203 THINISD-DGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS 261
Query: 295 HVDGFPISSEAERQRVMA-CLEAAIERRASE 324
+ G IS Q+V+A L + R A+E
Sbjct: 262 Y-KGKAISKPL--QQVLANSLRYFLRRPATE 289
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D+ ATV+++ +R G LL+ ++ L DL L + KA + D + F +T
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M ++ G++P KE +++
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHIN 206
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ +TD+ +V S E T A A HV + G
Sbjct: 207 ISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYK--G 264
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI ++++L N LR LR P+ SS
Sbjct: 265 KAISK-----PLQQVLANSLRYF--LRRPATEESS 292
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L DL +VV A ++ ++ + +G +ED
Sbjct: 98 DATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDP 157
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N L + +++ +A L + + V+ +
Sbjct: 158 ELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPK---------------EQVDVDIA 202
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
H+ I D D + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 203 THINISD-DGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS 261
Query: 295 HVDGFPISSEAERQRVMA-CLEAAIERRASE 324
+ G IS Q+V+A L + R A+E
Sbjct: 262 Y-KGKAISKPL--QQVLANSLRYFLRRPATE 289
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP +VIDN + TVI+V +++R G+L ++ + DL L I A+I++ G +DVFYV
Sbjct: 831 PPDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
Query: 74 TDINGQKIGDQATISYIKTTV 94
T QK+ D+AT S I+ +
Sbjct: 891 TGPGKQKVTDEATKSRIRGQI 911
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVD 385
+E++ DR GLL D+ R + GL I A I+T G K D F+VT P K+ D
Sbjct: 847 IEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT----GPGKQKVTD 900
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 73 VTDI-NGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLS 131
+TD+ +G + D+A + ++ + +A F + S+E T IE+ DRPGLL
Sbjct: 801 ITDVVSGARALDEAKVRSLRLKPKVDA-FTVPPDIVIDNTASQETTVIEVHALDRPGLLY 859
Query: 132 EVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
+++ DL + SA I T +A + +V
Sbjct: 860 DLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G L++ ++ L L+L + K ++++G F++T
Sbjct: 96 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 155
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKEY---------- 116
I+G+K+ D + I+ T+ N +S +M + G+ P K+
Sbjct: 156 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 215
Query: 117 -------TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
+ + + DRPGLL E+ ++TD++ V SAEI T A HV + G
Sbjct: 216 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVSYR--GA 273
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + +++ N LR LR P + S
Sbjct: 274 ALSSS-----LSQVMINSLRYY--LRRPETEVDS 300
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPR I N + +VI+V+ ++R G+L E+ L DL+L I A+I++ G ++D FYV
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 TDINGQKIGDQATISYIK 91
TD+ GQKI A I+ I+
Sbjct: 893 TDLTGQKIDSPARIATIR 910
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PKIVDSIQHQIG 392
DR GLLS+IT L + L I A I+T G KV DTF+VTD +G +D P + +I++++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLM 914
Query: 393 RTI 395
T+
Sbjct: 915 ATL 917
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ + S ++ IE+ G DRPGLLSE++ L+DLS + SA I T + +V D
Sbjct: 835 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL 188
+G I+ R+ I+ L L
Sbjct: 895 L-TGQKIDSPARIATIRNRLMATL 917
>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]
Length = 282
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D ATV+++ +R G LL+ + L +L L +TKA + D + F +T
Sbjct: 76 PKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSIT 135
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M + GV P K+ +++
Sbjct: 136 KADTGRKVEDPELLEAIRLTIINNLLQYHPESSSQLAMGVAFGVEPPKQQVDVDIATHIS 195
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV + G
Sbjct: 196 VYDDGPDRSLLFVETADRPGLLVDLVKIITDINVAVDSGEFDTEGLLAKAKFHVSYK--G 253
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI + ++++L N LR LR PS +S
Sbjct: 254 KAI-----IKPLQQVLANSLRYF--LRRPSTEEAS 281
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLEL-------ELYTDDRFGLLS 340
+ + +++H + FP + E R M +I R S +L E+ T DR GLL+
Sbjct: 767 FMQEHLEHPERFPATIERRTPRQMRLF--SIPTRTSMATDLNKGHTVLEVITPDRPGLLA 824
Query: 341 DITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIGRTI 395
+ RI +Y + ++ A+I+T+G +V+D FF+TD + P+ DPK+ + IQ I R +
Sbjct: 825 RLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQRPIDDPKLCEEIQQAICREL 880
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG-GYLMDVFYVTDINGQKIGD 83
E AT I V + + G+ + + L L+L I A I + G GY +D FYV +G+ IGD
Sbjct: 697 EGATQIFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGD 756
Query: 84 QAT-----ISYIKTTVETNASFLNSM---------------RSSVGVVPSKEYTSIELTG 123
+ I +++ +E F ++ R+S+ +K +T +E+
Sbjct: 757 NPSRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVIT 816
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRPGLL+ ++ + + +A+I T R + + D++ I+D K +I++
Sbjct: 817 PDRPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQR-PIDDPKLCEEIQQA 875
Query: 184 LCNVL 188
+C L
Sbjct: 876 ICREL 880
>gi|297844622|ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
gi|297336034|gb|EFH66451.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKE--------YTS 118
+ G+K+ D + I+ TV N +S +M ++ GV+P E + +
Sbjct: 144 KADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IELTG----------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
IE G DRPGLL E+ +++D+S +V S E T A HV ++
Sbjct: 204 IEDDGPNRSLLYIETADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVSYRN-- 261
Query: 169 CAIEDQKRLLK-IKKLLCNVLRTNGDLRTPSMSISS 203
K L+K ++++L N LR LR PS SS
Sbjct: 262 ------KALIKPLQQVLANSLRYF--LRRPSTDESS 289
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV +DN + TVI+V+ ++R G+L +V + DLNL I A+IS+ G ++DVFYVT
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTVE 95
D+ G KI + I I+ ++
Sbjct: 896 DLIGTKITSETRIERIEVRLK 916
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI-VDS 386
+E+ DR GLLSD+T + + L IR A IST G KV D F+VTD G + + ++
Sbjct: 851 IEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDLIGTKITSETRIER 910
Query: 387 IQHQIGRTILQVKGNLNTP 405
I+ ++ R +G +++P
Sbjct: 911 IEVRLKRVFESPEGEMSSP 929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R SV S + T IE+ G DRPGLLS+V+ ++DL+ + SA I T+ + + +V D
Sbjct: 837 RVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTD 896
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRT-NGDLRTPSMSISSARVL 207
G I + R+ +I+ L V + G++ +P + +SS R
Sbjct: 897 L-IGTKITSETRIERIEVRLKRVFESPEGEMSSP-VVMSSQRAF 938
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
+E T I + D P LLS ++ ++ A+I+T + RA ++ + +
Sbjct: 736 REVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDVMLLNREFES---- 791
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
D+ + + +++ N+ ++L G R + L A+R R + +
Sbjct: 792 DEDEIRRAERICANI----------------GKLLQG-REMPASLLANRRPPRSTEL-FA 833
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
+P V++ + T + + DRP LL D ++D+ + + T + +Y
Sbjct: 834 VKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFY 893
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIE 319
+ + G I+SE +R+ L+ E
Sbjct: 894 VTDLIGTKITSETRIERIEVRLKRVFE 920
>gi|18394414|ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|9802776|gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana]
gi|14423502|gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana]
gi|30023784|gb|AAP13425.1| At1g16880 [Arabidopsis thaliana]
gi|332191392|gb|AEE29513.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|347949478|gb|AEP31952.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 290
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKE--------YTS 118
+ G+K+ D + I+ TV N +S +M ++ GV+P E + +
Sbjct: 144 RADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IELTG----------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
IE G DRPGLL E+ +++D+S +V S E T A HV ++
Sbjct: 204 IEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVSYRN-- 261
Query: 169 CAIEDQKRLLK-IKKLLCNVLRTNGDLRTPSMSISS 203
K L+K ++++L N LR LR PS SS
Sbjct: 262 ------KALIKPLQQVLANSLRYF--LRRPSTDESS 289
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 28/176 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG-GYLMDVFYV 73
P V+IDN ATV++V N G LL+ + L +L L I K + G FYV
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 74 TD-INGQKIGDQATISYIKTTVETN--------ASFLNS------------------MRS 106
D NG+K+ + I+ T+ TN A ++ + +++
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEGVLGKVKKKVQT 131
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
+ P + ++ +E+ TDRPGLL +V L DLS VVSAE+ T +A+ +++V
Sbjct: 132 GIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYV 187
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 307 RQRVMACLEAAIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVK 366
+++V ++ A ER S+ LE+ T DR GLL D+ R L++ LC+ AE+ T+G K
Sbjct: 126 KKKVQTGIKCAPERYHSK---LEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKAS 182
Query: 367 DTFFVTDASG---NPVDPKIVDSIQHQIGRT 394
D +VT G P++ +V+S+ + + T
Sbjct: 183 DIIYVTHKGGPLSPPMEQLVVNSLSYYLSLT 213
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G L++ ++ L L+L + K ++++G F++T
Sbjct: 75 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 134
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKEY---------- 116
I+G+K+ D + I+ T+ N +S +M + G+ P K+
Sbjct: 135 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 194
Query: 117 -------TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
+ + + DRPGLL E+ ++TD++ V SAEI T A HV + G
Sbjct: 195 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVSYR--GA 252
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + +++ N LR LR P + S
Sbjct: 253 ALSSS-----LSQVMINSLRYY--LRRPETEVDS 279
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR G L+ + RIL EY + + A+I+T+G +V+D FF+TDA GNP+ DP + +
Sbjct: 824 LEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQ 883
Query: 387 IQHQI 391
+QH I
Sbjct: 884 LQHAI 888
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 26/199 (13%)
Query: 15 PRVVIDND--VCEHA-TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS--DGGYLMD 69
P V+I + + EHA T I + + + I L NL I A I S G+ MD
Sbjct: 695 PLVIISDSSVLGEHAVTQIFIRADLKQNIFAATTTILDHFNLNIQSAQIHSATSSGHTMD 754
Query: 70 VFYVTDINGQKIGDQATI-------------------SYIKTTVETNASFLNS-MRSSVG 109
FYV D + IG I IK + + ++ R+S+
Sbjct: 755 TFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSIH 814
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
S EYT +E+ DRPG L+ ++ +L + + +V+A+I T R + + D + G
Sbjct: 815 NDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD-ADGN 873
Query: 170 AIEDQKRLLKIKKLLCNVL 188
+ D +++ +C L
Sbjct: 874 PLSDPALCEQLQHAICTQL 892
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R I ND+ TV++V S +R G L + + LV+ N+ + A I++ G + D+F++
Sbjct: 808 PTRTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFI 867
Query: 74 TDINGQKIGDQA 85
TD +G + D A
Sbjct: 868 TDADGNPLSDPA 879
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TVI++ ++R G+L ++ L LNL I A+I + G +DVFYV
Sbjct: 819 PPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYV 878
Query: 74 TDINGQKI---GDQATIS 88
TD+ G KI G QATI+
Sbjct: 879 TDLTGTKITHAGRQATIT 896
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T IE++G DRPGLL +++ L L+ ++ SA I T +A + +V D +G I
Sbjct: 829 SSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDL-TGTKIT 887
Query: 173 DQKRLLKIKKLLCNVLRTN 191
R I + L V +
Sbjct: 888 HAGRQATITRTLLEVFKAE 906
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL D+T L + L I A I T G K D F+VTD +G +
Sbjct: 835 IEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDLTGTKITHA---GR 891
Query: 388 QHQIGRTILQV 398
Q I RT+L+V
Sbjct: 892 QATITRTLLEV 902
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 27 ATVIQVDSVNRHGILLEVI--QFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT I V + + G+ ++ L N+V K +DG +D F++ D NG+ D+
Sbjct: 730 ATEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADG-MALDTFFIQDTNGEAFNDK 788
Query: 85 ATISYIKTTVETNASFL--------------NSMRSSVGVV---------PSKEYTSIEL 121
+ + ++ T+E S N R++V V S+ +T IE+
Sbjct: 789 SKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEPNVIIDNKASRTHTVIEI 848
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
T DR GLL +V+ L DLS + SA I T RA + +VKD G I+ + + L++K
Sbjct: 849 TARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD-VFGLKIDSRTKFLQVK 907
Query: 182 KLLCNVLRTNG 192
+ L L NG
Sbjct: 908 ETLTQTLE-NG 917
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + TD PGL S+++ + +VV A+I T + A ++D ++G A D+
Sbjct: 731 TEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQD-TNGEAFNDKS 789
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
+L K++K L V+ +G LR PS I ++ + R + P
Sbjct: 790 KLDKLRKTLEQVI--SGRLR-PSQEIERRQIKDNKHR---------------TAVFKVEP 831
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
+V I + + R +T + I ++DR LL+D L D+ + + T A +Y+K
Sbjct: 832 NVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD 891
Query: 296 VDGFPISSEAERQRVMACLEAAIE 319
V G I S + +V L +E
Sbjct: 892 VFGLKIDSRTKFLQVKETLTQTLE 915
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI++ + +R G+L +V + L DL+L I A IS+ G +DVFYV
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G KI + +K T+
Sbjct: 891 DVFGLKIDSRTKFLQVKETL 910
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
+E+ DR GLL D+TR LR+ L I A IST G + D F+V D G +D +
Sbjct: 846 IEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKIDSR 900
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN TV++++ +R G+L +V L + L I A+I++ G
Sbjct: 858 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D+ + I+TT+
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTL 946
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S+++ + S+V A I T N A L ++D + G
Sbjct: 761 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQD-AGGA 819
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ ++L ++ L+ L G + R L G RR+ +
Sbjct: 820 AFEEPQQLARLSLLVEQAL--TGRININREIAQCGRRLSG-RRMRAI------------- 863
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + T V I +DRP LL D L++ + + + T + A
Sbjct: 864 --HVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVD 921
Query: 290 EYYIKHVDGFPISSEAERQRVMACL-------EAAIERRASE 324
+Y+K + G I+ + R+ L EAA +R++SE
Sbjct: 922 VFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRQSSE 963
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN TV++++ +R G+L +V L + L I A+I++ G
Sbjct: 843 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 902
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D+ + I+TT+
Sbjct: 903 RAVDVFYVKDLFGLKITDKGRLDRIRTTL 931
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S+++ + S+V A I T N A L ++D + G
Sbjct: 746 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQD-AGGA 804
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ ++L ++ L+ L G L R + G RR+ +
Sbjct: 805 AFEEPQQLARLSLLVEQAL--TGHLNINREIAQCGRRVSG-RRMRAI------------- 848
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + T V I +DRP LL D L++ + + + T + A
Sbjct: 849 --HVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVD 906
Query: 290 EYYIKHVDGFPISSEAERQRVMACL-------EAAIERRASE 324
+Y+K + G I+ + R+ L EAA +RR+SE
Sbjct: 907 VFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSSE 948
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN + TVI+V+ +R G+L +V L +L I+ A+I++ G
Sbjct: 847 RRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGM 906
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D ++ ++ T+
Sbjct: 907 RAVDVFYVRDLLGMKITDPVRLARLRETL 935
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P + T + + D PGL S+++ L S+V A I T + A V+D GC
Sbjct: 750 IPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQD-GEGC 808
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
+ E+ +L ++ L+ L D+R I A RR+ +
Sbjct: 809 SFEEPHQLGRLNHLVEQALSGRLDIRK---GIEDASHHSTSRRMRAI------------- 852
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + +T + + +DRP LL D L+ + + T M A
Sbjct: 853 --HVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVD 910
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y++ + G I+ R+ L A++
Sbjct: 911 VFYVRDLLGMKITDPVRLARLRETLLASL 939
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 52 NLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVET-------------NA 98
++V + + SDG +D F+V D G + + + VE +A
Sbjct: 782 SIVDARIHTLSDG-MALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDA 840
Query: 99 SFLNSMRS--SVGVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
S ++ R ++ V P S +T IE+ G DRPGLL +V++ L+ S + SA
Sbjct: 841 SHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAH 900
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPS 198
I T+ RA + +V+D G I D RL ++++ L L T+ + TP+
Sbjct: 901 ITTYGMRAVDVFYVRDL-LGMKITDPVRLARLRETLLASL-TSAPVTTPA 948
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
+S P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 686 DSGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAERQRVM--ACLEAA---------IERRASEGLE--------- 327
Y + DG I R + + +EA I+RR L+
Sbjct: 746 LDTYVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LEL DR GLL+ I RI EY L ++ A+I+T+G +V+D FFVTDA+
Sbjct: 806 IHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
P+ DP++ +Q I R L+ P PQ
Sbjct: 866 QPLSDPELCARLQETIVR-------RLSEPSAQPQ 893
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
DE+ +I+R P P+V I ND T++++ + +R G+L + + ++ +L
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF+VTD N Q + D + ++ T+
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQETI 881
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
N P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 NGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + DG PI + ER + + + L AA I+RR L+
Sbjct: 746 LDTYIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA
Sbjct: 806 IHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ DP++ +Q I + + Q +P
Sbjct: 866 QPLSDPQLCLRLQQAIIKELQQENEQQPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDADNQPLSD 870
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 23/124 (18%)
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS----------------SVGV 110
MDVF+VTD G K+ + + I+YI+ + FL+S S S+G+
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQSLGM 258
Query: 111 V--PSKEY-----TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVK 163
P++ T++ELTG DR GL+SEV VL D+ C VV WTH L+ ++
Sbjct: 259 WNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFLR 318
Query: 164 DQSS 167
D+ +
Sbjct: 319 DEET 322
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TV++V+ +R G+L V + L LNL I A +++ G +DVFYV
Sbjct: 848 PPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYV 907
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ +A ++ I+ +
Sbjct: 908 KDVFGLKVTHEAKLTQIRQAL 928
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T +E+ G DRPGLL V+ LT L+ + SA++ T+ A + +VKD G +
Sbjct: 858 STAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKD-VFGLKVT 916
Query: 173 DQKRLLKIKKLLCNVL 188
+ +L +I++ L + L
Sbjct: 917 HEAKLTQIRQALLDAL 932
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 30/204 (14%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T + + D PGL S ++ L ++V A I+T + A + + G + E +
Sbjct: 749 TDLTVYTADHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESPDK 808
Query: 177 LLK----IKKLLCNVLRTNGDL--RTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
L + ++K L LR +L R + S ARV
Sbjct: 809 LARLAVLVEKALAGELRMADELAKRRSATLPSRARV------------------------ 844
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ P V + + + +T V + DRP LL+ LT + + V T A
Sbjct: 845 FKVPPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDV 904
Query: 291 YYIKHVDGFPISSEAERQRVMACL 314
+Y+K V G ++ EA+ ++ L
Sbjct: 905 FYVKDVFGLKVTHEAKLTQIRQAL 928
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 84 PVVIIDQDSDTDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + ++ T+ N +S ++ ++ G+VP KE +++
Sbjct: 144 KADTGRKVDDSELLEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPKEQVDVDIATHLT 203
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV + G
Sbjct: 204 ISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVSYK--G 261
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI + ++++L N LR LR PS SS
Sbjct: 262 KAI-----IKPLQEVLANSLRYY--LRRPSTEESS 289
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + +G ++D
Sbjct: 95 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITKADTGRKVDDS 154
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L ++ + N + + +++ +A L + + V+ +
Sbjct: 155 ELLEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPK---------------EQVDVDIA 199
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
H+TI D D + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 200 THLTISD-DGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS 258
Query: 295 H 295
+
Sbjct: 259 Y 259
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDR 126
MDVF+VTD G K+ + + I+YI E + N + + + T++ELTG R
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYI----EQSLGMWNGPTRPMAL---EGLTALELTGAGR 78
Query: 127 PGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
GL+SEV AVL D+ C VV W H L+ ++++ + D +R+ +I+
Sbjct: 79 TGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D + ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M ++ GVVP K+ +++
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLAMGAAFGVVPPKQQVDVDIATHIN 205
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV +
Sbjct: 206 VQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAKAKFHVSYRG-- 263
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K +++++ N LR
Sbjct: 264 ------KPLIKPLQQVISNSLR 279
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TVI+++ +R G+L ++ + L L I+ A+IS+ G ++DVFYV
Sbjct: 826 PPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV 885
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ + + I+ T+
Sbjct: 886 KDVFGHKVEHERKLERIRVTL 906
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-------------- 99
++ I+ G +D F+V D G A ++ + T+E S
Sbjct: 755 IVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRLANTIEQVLSGRLRLAQELASRKG 814
Query: 100 --------FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
F R V PS+ +T IE+ G DRPGLL ++++ +T L + SA I T
Sbjct: 815 NLPSRAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHIST 874
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
+ R + +VKD G +E +++L +I+ L L+
Sbjct: 875 YGERVVDVFYVKD-VFGHKVEHERKLERIRVTLLAALK 911
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 21/200 (10%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PGL S+++ + ++V A+I T N A V+D S G + +L +
Sbjct: 736 DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQD-SEGAPFDSPAKLNR---- 790
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
L N + +VL G RL Q L + + + P V + +
Sbjct: 791 LANTIE---------------QVLSGRLRLAQELASRKGNLPSRAHVFKVPPRVLVDNKP 835
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
R +T + I +DRP LL+D +T + + + T +Y+K V G +
Sbjct: 836 SRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKVEH 895
Query: 304 EAERQRVMACLEAAIERRAS 323
E + +R+ L AA++ + S
Sbjct: 896 ERKLERIRVTLLAALKEQNS 915
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+E+ DR GLL DIT + + GL I A IST G +V D F+V D G+ V+
Sbjct: 842 IEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKVE 894
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKIGDQATISYI 90
D+ GQKI ++ +YI
Sbjct: 908 ADLVGQKISNENRRAYI 924
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VGQKIS 916
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA 204
++ R I L V+ D R PS I+ A
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERMPSGIIAPA 951
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+V D G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G +RL +++ A R R + P V I + +T + + DRP LL +
Sbjct: 821 VLAGRKRLPEVI-ATRTKNRRKNKAFVIPPSVIITNSLSNKFTVIEVECLDRPGLLSEIT 879
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
L+D+ + + T + +Y+ + G IS+E R + A L+A +
Sbjct: 880 AVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNENRRAYITARLKAVM 932
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKIGDQATISYI 90
D+ GQKI ++ +YI
Sbjct: 908 ADLVGQKISNENRRAYI 924
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VGQKIS 916
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA 204
++ R I L V+ D R PS I+ A
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERMPSGIIAPA 951
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+V D G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G +RL +++ A R R + P V I + +T + + DRP LL +
Sbjct: 821 VLAGRKRLPEVI-ATRTKNRRKNKAFVIPPSVIITNSLSNKFTVIEVECLDRPGLLSEIT 879
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
L+D+ + + T + +Y+ + G IS+E R + A L+A +
Sbjct: 880 AVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNENRRAYITARLKAVM 932
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 28/176 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+IDN ATV++V G L++ I L +L L I + ++ G FYV
Sbjct: 275 PKVIIDNKSDAFATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVL 334
Query: 75 DIN-GQKIGDQATISYIKTTVETNA-----------------------SFLNSMRSSV-- 108
D + G+K+ + I+ TV TN S L +RS+V
Sbjct: 335 DRDTGEKVTKSERLEEIRQTVLTNMLAFHPESAEFIQAKAPTRAGANDSPLGKVRSTVET 394
Query: 109 GV--VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
G+ K +T +++ TDRPGLL +V L DLS VVSAE+ T +A ++++
Sbjct: 395 GIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYI 450
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
+L++ T DR GLL D+ R L++ LC+ AE+ T+G K KD ++T G P+ P +
Sbjct: 406 KLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITH-RGGPLSPAM 461
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVI--QFLVDLNLVITKAYISSDGGYLMDVFYVT 74
V ID ++ AT I V + + G+ ++ L N+V K +DG +D F+V
Sbjct: 718 VRIDTEI--DATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADG-MALDTFFVQ 774
Query: 75 DINGQKIGDQATISYIKTTVETNASFL--------------NSMRSSVGVV--------- 111
D NG+ D + ++ T+E S N R++V V
Sbjct: 775 DTNGEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEPNVIIDNK 834
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
S+ +T IE+T DR GLL +++ L DLS + SA I T RA + +VKD G I
Sbjct: 835 ASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD-VFGLKI 893
Query: 172 EDQKRLLKIKKLLCNVLRTN 191
+ + + +++K+ L +R +
Sbjct: 894 DSRTKFVQVKETLTQAIRND 913
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + TD PGL S+++ + +VV A+I T + A V+D ++G A D
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQD-TNGEAFNDST 785
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
+L +++ L V+ +G +R PS I ERR +D + V + P
Sbjct: 786 KLDRLRDTLEKVI--SGQIR-PSQEI--------ERR------QTKDNKHRTAV-FKVEP 827
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
+V I + + R +T + I ++DR LL+D L D+ + + T A +Y+K
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD 887
Query: 296 VDGFPISSEAERQRVMACLEAAI 318
V G I S + +V L AI
Sbjct: 888 VFGLKIDSRTKFVQVKETLTQAI 910
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI++ + +R G+L ++ + L DL++ I A IS+ G +DVFYV
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G KI + +K T+
Sbjct: 887 DVFGLKIDSRTKFVQVKETL 906
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
+E+ DR GLL DITR LR+ + I A IST G + D F+V D G +D +
Sbjct: 842 IEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKDVFGLKIDSR 896
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
N P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 NGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + VDG PI + ER + + L A I+RR L+
Sbjct: 746 LDTYIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA
Sbjct: 806 IHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ DP+ +Q + + + Q L +P
Sbjct: 866 QPLSDPQFCLRLQQALVKELQQENEQLPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDAHNQPLSD 870
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD 83
E T I + + ++H + + LNL I A I +S + +D + V D++G IG+
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDVDGSPIGN 761
Query: 84 QAT-ISYIK----TTVETNASFLNSMRSSV-------GVVPS--------KEYTSIELTG 123
I I+ T + +LN ++ V P + T +E+
Sbjct: 762 NPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRPGLL+ V + D SV +A+I T R + V D + + D + L++++
Sbjct: 822 PDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-AHNQPLSDPQFCLRLQQA 880
Query: 184 LCNVLRT-NGDLRTPS 198
L L+ N L +PS
Sbjct: 881 LVKELQQENEQLPSPS 896
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 825 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884
Query: 74 TDINGQKIGDQATISYI 90
D+ GQKI ++ +YI
Sbjct: 885 ADLVGQKISNENRRAYI 901
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D G I
Sbjct: 835 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VGQKIS 893
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA 204
++ R I L V+ D R PS I+ A
Sbjct: 894 NENRRAYITARLKAVMAGEEDEMRERMPSGIIAPA 928
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+V D G +
Sbjct: 847 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 892
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G +RL +++ A R R + P V I + +T + + DRP LL +
Sbjct: 798 VLAGRKRLPEVI-ATRTKNRRKNKAFVIPPSVIITNSLSNKFTVIEVECLDRPGLLSEIT 856
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
L+D+ + + T + +Y+ + G IS+E R + A L+A +
Sbjct: 857 AVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNENRRAYITARLKAVM 909
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN+ TVI+V+ +R G+L ++ + L +L L I+ A IS+ G +DVFYV
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ + ++ IK
Sbjct: 900 KDVFGLKVTHEGKLAKIK 917
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQK 175
T + + TD GL S ++ L +V A I+T N A + V+D ++G A E
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQD-AAGGAFESSD 800
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
+L K+ ++ VL +G L+ P +++ R H R ++ P
Sbjct: 801 KLAKLSVMIEKVL--SGQLK-PLNDLATRRTSHASR----------------TRVFHVPP 841
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + + +T + + +DRP LL+D L+++ + + T +A +Y+K
Sbjct: 842 RVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKD 901
Query: 296 VDGFPISSEAERQRVMACLEAAI 318
V G ++ E + ++ L +A+
Sbjct: 902 VFGLKVTHEGKLAKIKERLLSAL 924
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF----LNSM---------RSSVGVV 111
G +DVF V D G ++ + +E S LN + R+ V V
Sbjct: 780 GMALDVFSVQDAAGGAFESSDKLAKLSVMIEKVLSGQLKPLNDLATRRTSHASRTRVFHV 839
Query: 112 P---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
P S +T IE+ G DRPGLL +++ L++L+ + SA+I T +A + +V
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVL 188
KD G + + +L KIK+ L + L
Sbjct: 900 KD-VFGLKVTHEGKLAKIKERLLSAL 924
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+TR L L I A+IST G K D F+V D G
Sbjct: 856 IEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKDVFG 904
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN TV++++ +R G+L +V L + L I A+I++ G
Sbjct: 854 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D+ + ++TT+
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTL 942
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S+++ + S+V A I T N A L ++D + G
Sbjct: 757 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQD-AGGA 815
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ ++L ++ L+ L G L R L G RR+ +
Sbjct: 816 AFEEPQQLGRLSLLIEQAL--TGHLNINREIAQCGRRLSG-RRMRAI------------- 859
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + T V I +DRP LL D L++ + + + T + A
Sbjct: 860 --HVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVD 917
Query: 290 EYYIKHVDGFPISSEAERQRVMACL-------EAAIERRASE 324
+Y+K + G I+ + RV L EAA +RR+SE
Sbjct: 918 VFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSSE 959
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVVIDN TVI+++ +R G+L +V Q + D L I A+I++ G +DVFYV
Sbjct: 886 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI D+ + I+ +
Sbjct: 946 KDLFGLKITDERRLGEIREAL 966
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS---------------FLNSMRSSVG 109
G +D F++ D G+ + ++ + VE S ++
Sbjct: 825 GMALDTFWIQDAGGEAFEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH 884
Query: 110 VVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
V P S YT IE+ G DRPGLL +V+ ++D + SA I T+ RA + +
Sbjct: 885 VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFY 944
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D++RL +I++ L + LR
Sbjct: 945 VKDL-FGLKITDERRLGEIREALLHGLR 971
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S ++ L S+V A I T N A ++D + G
Sbjct: 781 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQD-AGGE 839
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ +L ++ L+ L D+ +S R R +H
Sbjct: 840 AFEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH--------------- 884
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
P V I + + YT + I +DRP LL D ++D + + + T + A
Sbjct: 885 ---VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVD 941
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIE--RRASEGLELEL 330
+Y+K + G I+ E +R+ EA + R+A E + E+
Sbjct: 942 VFYVKDLFGLKITDE---RRLGEIREALLHGLRQAEEAMTSEI 981
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ RAS +E+ DR GLL D+T+ + ++ L I A I+T G + D F+V D G
Sbjct: 891 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 950
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 83 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 142
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S ++ ++ G+VP KE +E+
Sbjct: 143 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPKEQVDVEIATQIT 202
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ +TD++ +V S E T A A HV
Sbjct: 203 ISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVN----- 257
Query: 169 CAIEDQKRLLKIKKLLCNVLR 189
+D+ + ++ +L N LR
Sbjct: 258 --YKDKALIKPLQLVLVNSLR 276
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + SG +ED
Sbjct: 94 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDP 153
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N + + +++ +A L + + V+
Sbjct: 154 ELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPK---------------EQVDVEIA 198
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
+TI D + + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 199 TQITISDDGPK-RSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVN 257
Query: 295 HVD 297
+ D
Sbjct: 258 YKD 260
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN + TVI+V+ +R G L V Q L + + I+ A IS+ G ++DVFYV
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 74 TDINGQKIGDQATISYIKTTVET 96
D+ G K+ + ++ I+ +E
Sbjct: 885 KDVFGMKVVHKTKLAQIREALEA 907
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTV--------------ETNASFLNSMRSSVGV 110
G +D F + ++G+ I + I + TV + A L ++ V
Sbjct: 765 GMALDTFTIQTLDGRPIAEPERIERLARTVRGVLTGTIALARALQEQAPRLPERAHALTV 824
Query: 111 VP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
P SK +T IE+ G DRPG L V+ LT + + SA I T+ R + +V
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 163 KDQSSGCAIEDQKRLLKIKKLL 184
KD G + + +L +I++ L
Sbjct: 885 KD-VFGMKVVHKTKLAQIREAL 905
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 107 SVGVVPS--KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
+V V+P + + + + D PGL S+++ + +++ A I T A
Sbjct: 715 AVEVIPDSHRSVSDVIIYTDDHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQ 774
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFE 224
G I + +R+ ++ + + VL + +I+ AR L + A R E
Sbjct: 775 TLDGRPIAEPERIERLARTVRGVL---------TGTIALARALQEQ--------APRLPE 817
Query: 225 RLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR 284
R + P V I + + + +T + + +DRP L LT + + + T
Sbjct: 818 RAHALTVP--PRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYG 875
Query: 285 MEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K V G + + + ++ LEAAI
Sbjct: 876 ERVVDVFYVKDVFGMKVVHKTKLAQIREALEAAI 909
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR G L +T+ L G+ I A IST G +V D F+V D G V
Sbjct: 841 IEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKV 892
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN TV++++ +R G+L ++ L + L I A+I++ G
Sbjct: 800 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G KI D+ + I+TT+
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTL 888
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S+++ + S+V A I T N A L ++D + G
Sbjct: 703 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQD-AGGA 761
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ ++L ++ L+ L + D+ + + RRL R+ +
Sbjct: 762 AFEEPQQLGRLSLLIEQALTGHIDI--------NREIAQCGRRLSG--------RRMRAI 805
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + T V I +DRP LL D L++ + + + T + A
Sbjct: 806 HVP--PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVD 863
Query: 290 EYYIKHVDGFPISSEAERQRVMACL-------EAAIERRASE 324
+Y+K + G I+ R+ L EAA +RR+SE
Sbjct: 864 VFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSE 905
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL DIT L E L I A I+T G + D F+V D G
Sbjct: 824 VEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 872
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVVIDN TVI+++ +R G+L +V Q + D L I A+I++ G +DVFYV
Sbjct: 885 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI D+ + I+ +
Sbjct: 945 KDLFGLKITDERRLGEIREAL 965
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS---------------FLNSMRSSVG 109
G +D F++ D G+ + ++ + VE S ++
Sbjct: 824 GMALDTFWIQDAGGEAFEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH 883
Query: 110 VVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
V P S YT IE+ G DRPGLL +V+ ++D + SA I T+ RA + +
Sbjct: 884 VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFY 943
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D++RL +I++ L + LR
Sbjct: 944 VKDL-FGLKITDERRLGEIREALLHGLR 970
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S ++ L S+V A I T N A ++D + G
Sbjct: 780 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQD-AGGE 838
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ +L ++ L+ L D+ +S R R +H
Sbjct: 839 AFEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH--------------- 883
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
P V I + + YT + I +DRP LL D ++D + + + T + A
Sbjct: 884 ---VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVD 940
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIE--RRASEGLELEL 330
+Y+K + G I+ E +R+ EA + R+A E + E+
Sbjct: 941 VFYVKDLFGLKITDE---RRLGEIREALLHGLRQAEEAMTSEI 980
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ RAS +E+ DR GLL D+T+ + ++ L I A I+T G + D F+V D G
Sbjct: 890 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 949
>gi|167854603|ref|ZP_02477384.1| uridylyltransferase [Haemophilus parasuis 29755]
gi|167854358|gb|EDS25591.1| uridylyltransferase [Haemophilus parasuis 29755]
Length = 864
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I N AT I V ++ + + Q L + I A I +SD G ++D F +
Sbjct: 672 PMVLISNQYARGATEIFVHCQDQAQLFARIAQMLSQKKVSIHDAQILTSDHGLVLDSFII 731
Query: 74 TDINGQKIGD----QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI---------- 119
T++NG+ + D Q + +KT + N + SV K T I
Sbjct: 732 TEMNGEPLDDERSEQIQSALVKTLLADTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 791
Query: 120 ---ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
EL DR GLL+++ + L ++++A+I T R V +Q +G E+++
Sbjct: 792 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQA 851
Query: 177 LLK 179
+LK
Sbjct: 852 MLK 854
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN+ TVI+V+ +R G+L ++ + L +L L I+ A IS+ G +DVFYV
Sbjct: 846 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 905
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ ++ ++ I+
Sbjct: 906 KDVFGLKVTHESKLAQIR 923
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAI 171
+ T + + TD GL S ++ L +V A I+T N A + V+D + G A
Sbjct: 743 GRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAF 802
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
E +L K+ ++ VL +G L+ P ++ + H R +
Sbjct: 803 ESGDKLAKLSVMIEKVL--SGQLK-PLHDLTKRKAPHASR----------------TRVF 843
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ P V I + + +T + + +DRP LL+D LT++ + + T +A +
Sbjct: 844 HVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVF 903
Query: 292 YIKHVDGFPISSEAE----RQRVMACL 314
Y+K V G ++ E++ R+R++ L
Sbjct: 904 YVKDVFGLKVTHESKLAQIRERLLHAL 930
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+TR L L I A+IST G K D F+V D G
Sbjct: 862 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 910
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++ N+ TVI+V+ +R G+L ++ LV L L I A +S+ G ++DVFYV
Sbjct: 865 PPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV 924
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI +A+ I+ T+
Sbjct: 925 KDVYGLKIEREASQKKIEQTL 945
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 26/193 (13%)
Query: 19 IDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS-DGGYLMDVFYVTDIN 77
ID+D + +T++ V + + G+ ++ + I A I++ G ++D F + D +
Sbjct: 760 IDDD--KESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGTILDQFRIQDKD 817
Query: 78 GQKIGDQATISYIKTTVETN--------------ASFLNSMRSSVGVVP--------SKE 115
Q + D + I +E + ++ + + ++ V P S
Sbjct: 818 RQAVIDPQIQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQKAMSVPPRVIVSNNRSNT 877
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
+T IE+ G DRPGLL +++ L L + SA + T+ + + +VKD G IE +
Sbjct: 878 HTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKD-VYGLKIEREA 936
Query: 176 RLLKIKKLLCNVL 188
KI++ L V
Sbjct: 937 SQKKIEQTLMGVF 949
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 306 ERQRVMACLEAAI--ERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR 363
+RQ+ M+ I R++ +E+ DR GLL IT L + GL I A +ST G
Sbjct: 857 KRQKAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGE 916
Query: 364 KVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398
KV D F+V D G ++ ++ Q +I +T++ V
Sbjct: 917 KVVDVFYVKDVYGLKIER---EASQKKIEQTLMGV 948
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG-GYLMDVFYVTDINGQKIGDQ 84
AT I + + +R G+ ++ Q + L +T A +++ G ++DVF V D G G Q
Sbjct: 676 QATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYG-Q 734
Query: 85 ATISYIKTTVET--------------NASFLNSMRSSVGVVP--------SKEYTSIELT 122
A +K V+ A N+ +++ V P S+ T +E++
Sbjct: 735 AEPRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVS 794
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLL+ +S V +D ++ SA + ++ RA +V D G I ++R+ +++
Sbjct: 795 GADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVD-GKGRKITSEQRIAELRT 853
Query: 183 LLCNVLRTNGDLRTPS---MSISSARV 206
L VL D R P+ ++SAR
Sbjct: 854 ALEAVL----DSRAPAPEGRKVASARA 876
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V++D+ E ATV++V +R G+L + + D L I A+++S G +D FYV
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 75 DINGQKIGDQATISYIKTTVET 96
D G+KI + I+ ++T +E
Sbjct: 836 DGKGRKITSEQRIAELRTALEA 857
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL+ ++R+ + GL IR A +++ G + D+F+V D G +
Sbjct: 791 VEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKI 842
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN+ TVI+V+ +R G+L ++ + L +L L I+ A +S+ G +DVFYV
Sbjct: 841 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYV 900
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ + ++ IK
Sbjct: 901 KDVFGLKVTHEGKLAKIK 918
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAI 171
+ T + + TD GL S ++ L +V A I+T N A + V+D + G A
Sbjct: 738 GRAVTEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGGAF 797
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
E +L K+ ++ VL +G L+ P +S+ R R +
Sbjct: 798 ESGDKLAKLSVMIEKVL--SGQLK-PLNDLSTRRTTQASR----------------TRVF 838
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ P V I + + +T + + +DRP LL+D L+++ + V T +A +
Sbjct: 839 HVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVF 898
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE 319
Y+K V G ++ E + ++ L +A++
Sbjct: 899 YVKDVFGLKVTHEGKLAKIKERLLSALD 926
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 25/158 (15%)
Query: 65 GYLMDVFYVTDINGQ---KIGDQ-ATIS-YIKTTVETNASFLNSM---------RSSVGV 110
G +DVF V D G + GD+ A +S I+ + LN + R+ V
Sbjct: 780 GMALDVFSVQDAAGGGAFESGDKLAKLSVMIEKVLSGQLKPLNDLSTRRTTQASRTRVFH 839
Query: 111 VP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
VP S +T IE+ G DRPGLL +++ L++L+ + SA++ T +A + +
Sbjct: 840 VPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFY 899
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVL-RTNGDLRTPS 198
VKD G + + +L KIK+ L + L +GD P+
Sbjct: 900 VKD-VFGLKVTHEGKLAKIKERLLSALDDPSGDAPPPA 936
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+TR L L I A++ST G K D F+V D G
Sbjct: 857 IEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKDVFG 905
>gi|219872237|ref|YP_002476612.1| PII uridylyl-transferase [Haemophilus parasuis SH0165]
gi|219692441|gb|ACL33664.1| uridylyltransferase [Haemophilus parasuis SH0165]
Length = 858
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I N AT I V ++ + + Q L + I A I +SD G ++D F +
Sbjct: 666 PMVLISNQYARGATEIFVHCQDQAQLFARIAQTLSQKKVSIHDAQILTSDHGLVLDSFII 725
Query: 74 TDINGQKIGD----QATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI---------- 119
T++NG+ + D Q + +KT + N + SV K T I
Sbjct: 726 TEMNGEPLDDERSEQIQSALVKTLLANTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 785
Query: 120 ---ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
EL DR GLL+++ + L ++++A+I T R V +Q +G E+++
Sbjct: 786 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQA 845
Query: 177 LLK 179
+LK
Sbjct: 846 MLK 848
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 8 LIRRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
L RRM PPRVVIDN + TVI+V+ +R G+L +V L +L I+ A+I++
Sbjct: 840 LSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTY 899
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
G +DVFYV D+ G KI D ++ I+ +
Sbjct: 900 GMRAVDVFYVRDLLGMKIVDPVRLNRIREAL 930
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P + T + + D PGL S+++ L S+V A I T + A V+D + GC
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQD-AEGC 803
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
+ E+ +L ++ L+ L D+R S HG R R+ +
Sbjct: 804 SFEEPHQLGRLNHLVEQALSGRLDIRQGIAEASH----HGLSR------------RMRAI 847
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + +T + + +DRP LL D L+ + + T M A
Sbjct: 848 HVP--PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVD 905
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y++ + G I R+ L A++
Sbjct: 906 VFYVRDLLGMKIVDPVRLNRIREALLASL 934
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 52 NLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVG-- 109
++V + + SDG +D F+V D G + + + VE S +R +
Sbjct: 777 SIVDARIHTLSDG-MALDTFWVQDAEGCSFEEPHQLGRLNHLVEQALSGRLDIRQGIAEA 835
Query: 110 -------------VVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
V P S +T IE+ G DRPGLL +V++ L+ S + SA
Sbjct: 836 SHHGLSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAH 895
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
I T+ RA + +V+D G I D RL +I++ L L
Sbjct: 896 ITTYGMRAVDVFYVRDL-LGMKIVDPVRLNRIREALLASL 934
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL D+T L L I A I+T G + D F+V D G KIVD +
Sbjct: 866 IEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRDLLGM----KIVDPV 921
Query: 388 QHQIGRTILQVKGNLNTPPKLPQEP 412
++ R + +L TPP+ P
Sbjct: 922 --RLNRIREALLASL-TPPQPATAP 943
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN + TVI+++ +R G L V + L D+ + I+ A +S+ G ++D FYV
Sbjct: 825 PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884
Query: 74 TDINGQKIGDQATISYIKTTVE 95
D+ G KI +A ++ I+ +E
Sbjct: 885 KDVFGMKIVHRAKLAQIREALE 906
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + + + + D PGL S+++ + +++ A+I T + A + G AI
Sbjct: 722 PERAVSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAI 781
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLR-TPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E ++R+ ++ K + +VL GDL ++ R+ R L
Sbjct: 782 EKEERIARLAKTVRDVL--TGDLPLEKALRRQPPRLPERTRHL----------------- 822
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
P V + + + + +T + I +DRP L+ LTD+ + V T
Sbjct: 823 -TVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDS 881
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI----ERRASEGLE 327
+Y+K V G I A+ ++ LEAAI R+ EG E
Sbjct: 882 FYVKDVFGMKIVHRAKLAQIREALEAAITQTVPRKVEEGAE 922
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVE----TNASFLNS 103
L +N++ K SDGG L D+F V + G I + I+ + TV + +
Sbjct: 749 LAGVNILDAKITTMSDGGAL-DIFTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKA 807
Query: 104 MRSSVGVVP------------------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
+R +P SK +T IE+ G DRPG L V+ LTD++ +
Sbjct: 808 LRRQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQIS 867
Query: 146 SAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLL 184
SA + T+ R +VKD G I + +L +I++ L
Sbjct: 868 SARVSTYGERVVDSFYVKD-VFGMKIVHRAKLAQIREAL 905
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D ATV++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 74 PKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSIT 133
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEY---------- 116
+ G+K+ D + I+ T+ N +S +M + GV P K+
Sbjct: 134 KASTGRKVDDPELLEAIRLTIINNLLQYHPESSSQLAMGIAFGVEPPKQVDVDIATRVKV 193
Query: 117 -------TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
+ + + DRPGLL ++ +TD++ +V S E T A A HV + G
Sbjct: 194 KEDSPDRSLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHVSYK--GK 251
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI +L +L N LR LR PS +S
Sbjct: 252 AISKPLQL-----VLANSLRYF--LRRPSTEEAS 278
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + S+G ++D
Sbjct: 85 DATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDP 144
Query: 175 KRLLKIK-KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS 233
+ L I+ ++ N+L+ + + SS+++ G + F +++D V+ +
Sbjct: 145 ELLEAIRLTIINNLLQYHPE--------SSSQLAMG------IAFGVEPPKQVD-VDIAT 189
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
R V D DR + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 190 RVKVK-EDSPDR--SLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHV 246
Query: 294 KH 295
+
Sbjct: 247 SY 248
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAERQR-VMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R R + L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
DP++ +Q I + + +G+ +P +L
Sbjct: 869 SDPQLCSRLQEAIVQQLQAGQGSDTSPSRL 898
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
N P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 NGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + DG PI + ER + + + L AA I+RR L+
Sbjct: 746 LDTYIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA
Sbjct: 806 IHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ DP+ +Q + + + Q +P
Sbjct: 866 QPLSDPQFCLRLQQALVKELQQENEQQPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDADNQPLSD 870
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPR I N + +VI+++ ++R G+L E+ L DL+L I A+I++ G ++D FYV
Sbjct: 833 PPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 TDINGQKIGDQATISYI-KTTVET 96
TD+ GQKI ++ I K +ET
Sbjct: 893 TDLTGQKIDSPTRMATIHKRLIET 916
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ + S ++ IE+ G DRPGLLSE++ L+DLS + SA I T + +V D
Sbjct: 835 RAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL 188
+G I+ R+ I K L L
Sbjct: 895 L-TGQKIDSPTRMATIHKRLIETL 917
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PKIVDS 386
+E+ DR GLLS+IT L + L I A I+T G KV DTF+VTD +G +D P + +
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMAT 908
Query: 387 IQHQIGRTILQVKGNLNTPPKLPQE 411
I ++ T+ N K E
Sbjct: 909 IHKRLIETLEGTAPERNGKAKAAAE 933
>gi|402820021|ref|ZP_10869588.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
gi|402510764|gb|EJW21026.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
Length = 973
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 6 AKLIRRMNPPRVV----IDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
A RR+N ++V IDNDV H+TVI+V ++R G+L + + L +LN+ I A
Sbjct: 846 APFSRRVNAFKLVNNVMIDNDVSSHSTVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAV 905
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIEL 121
+ G +DVFYV D+ G+K+ ++ ++ I +++ L + + PSK+ +
Sbjct: 906 TFGERAVDVFYVQDLTGEKVTRKSKLTAIMDSLQM---VLTNQDKPIPTKPSKQAKQAKQ 962
Query: 122 TGTDRPG 128
+ + G
Sbjct: 963 SKQAKQG 969
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T IE++G DRPGLL ++ L +L+ ++VSA T RA + +V+D +G +
Sbjct: 868 SSHSTVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAVTFGERAVDVFYVQDL-TGEKVT 926
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSAR 205
+ +L I L VL TN D P+ A+
Sbjct: 927 RKSKLTAIMDSLQMVL-TNQDKPIPTKPSKQAK 958
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN+ TVI+V+ +R G+L ++ + L +L L I+ A IS+ G +DVFYV
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ + ++ I+
Sbjct: 904 KDVFGLKVTHENKLAQIR 921
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAI 171
+ T + + TD GL S ++ L +V A I+T N A + V+D + G A
Sbjct: 741 GRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAF 800
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
E +L K+ ++ VL +G L+ P ++ + H R +
Sbjct: 801 ESGDKLAKLSVMIEKVL--SGQLK-PLHDLTKRKAPHASR----------------TRVF 841
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
+ P V I + + +T + + +DRP LL+D LT++ + + T +A +
Sbjct: 842 HVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVF 901
Query: 292 YIKHVDGFPISSEAE----RQRVMACL 314
Y+K V G ++ E + R+R++ L
Sbjct: 902 YVKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+TR L L I A+IST G K D F+V D G
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 908
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM-----RSSVGVVP------- 112
G +D F++ D +GQ + ++ + + +E S + R+ G +P
Sbjct: 834 GMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMRMRAIH 893
Query: 113 -----------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
S YT IE+ G DRPGLL +V+A ++ + + SA I T+ RA + +
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D+KRL +I++ L L+
Sbjct: 954 VKDL-FGLKITDKKRLEEIRERLLAGLK 980
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 5 FAKLIRRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
F + RM PPRVVIDN + TVI+++ +R G+L +V + NL I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
++ G +DVFYV D+ G KI D+ + I+
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIR 972
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
+P++ T + + D PGL S+++ L S+V A I T A +SG A
Sbjct: 790 LPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQDTSGQA 849
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E+ +L ++ L+ L + D+ S I+ A H R+ +
Sbjct: 850 YEETHKLARLASLIEQGLSGHIDI---SEEIARAGFGHMPMRMRAI-------------- 892
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ P V I + YT + I +DRP LL D ++ + + T + A
Sbjct: 893 -HVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDV 951
Query: 291 YYIKHVDGFPISS----EAERQRVMACLE 315
+Y+K + G I+ E R+R++A L+
Sbjct: 952 FYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM-----RSSVGVVP------- 112
G +D F++ D +GQ + ++ + + +E S + R+ G +P
Sbjct: 834 GMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMRMRAIH 893
Query: 113 -----------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
S YT IE+ G DRPGLL +V+A ++ + + SA I T+ RA + +
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D+KRL +I++ L L+
Sbjct: 954 VKDL-FGLKITDKKRLEEIRERLLAGLK 980
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 5 FAKLIRRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
F + RM PPRVVIDN + TVI+++ +R G+L +V + NL I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
++ G +DVFYV D+ G KI D+ + I+
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIR 972
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
+P++ T + + D PGL S+++ L S+V A I T A +SG A
Sbjct: 790 LPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQDTSGQA 849
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E+ +L ++ L+ L + D+ S I+ A H R+ +
Sbjct: 850 YEETHKLARLASLIEQGLSGHIDI---SEEIARAGFGHMPMRMRAI-------------- 892
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ P V I + YT + I +DRP LL D ++ + + T + A
Sbjct: 893 -HVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDV 951
Query: 291 YYIKHVDGFPISS----EAERQRVMACLE 315
+Y+K + G I+ E R+R++A L+
Sbjct: 952 FYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM-----RSSVGVVP------- 112
G +D F++ D +GQ + ++ + + +E S + R+ G +P
Sbjct: 834 GMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMRMRAIH 893
Query: 113 -----------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
S YT IE+ G DRPGLL +V+A ++ + + SA I T+ RA + +
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D+KRL +I++ L L+
Sbjct: 954 VKDL-FGLKITDKKRLEEIRERLLAGLK 980
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 5 FAKLIRRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
F + RM PPRVVIDN + TVI+++ +R G+L +V + NL I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
++ G +DVFYV D+ G KI D+ + I+
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIR 972
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
+P++ T + + D PGL S+++ L S+V A I T A +SG A
Sbjct: 790 LPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQDTSGQA 849
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E+ +L ++ L+ L + D+ S I+ A H R+ +
Sbjct: 850 YEETHKLARLASLIEQGLSGHIDI---SEEIARAGFGHMPMRMRAI-------------- 892
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ P V I + YT + I +DRP LL D ++ + + T + A
Sbjct: 893 -HVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDV 951
Query: 291 YYIKHVDGFPISS----EAERQRVMACLE 315
+Y+K + G I+ E R+R++A L+
Sbjct: 952 FYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
RRM PPRVVIDN TVI+V+ +R G+L +V + + + L I+ A+I++ G
Sbjct: 853 RRMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGI 912
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D+ G K+ D+ +S ++ +
Sbjct: 913 RAVDVFYVKDVFGLKVQDRKRLSIVREAI 941
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P + T + + D PGL S++S L S+V A I T N ++D +
Sbjct: 755 LPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDAAQDV 814
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQ----MLFADRDFER 225
+D RL +I +L+ L D+ E+RL + ML+ R
Sbjct: 815 -FDDPHRLERIIELINTALAGTVDI---------------EKRLQECNRHMLYG----RR 854
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
+ ++ P V I + + +T + + +DR LL+D + + + + + T +
Sbjct: 855 MRAIHVP--PRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGI 912
Query: 286 EAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319
A +Y+K V G + +R+R+ EA ++
Sbjct: 913 RAVDVFYVKDVFGLKVQ---DRKRLSIVREAILK 943
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGD---------------QATISYIKTTVETNASFLNSMRSSVG 109
G ++D F++ D D T+ K E N L R
Sbjct: 799 GMVLDTFWIQDAAQDVFDDPHRLERIIELINTALAGTVDIEKRLQECNRHMLYGRRMRAI 858
Query: 110 VVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALL 160
VP S +T IE+ G DR GLL +V+ + + + SA I T+ RA +
Sbjct: 859 HVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVF 918
Query: 161 HVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+VKD G ++D+KRL +++ + VL
Sbjct: 919 YVKD-VFGLKVQDRKRLSIVREAILKVL 945
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ +AS G +E+ DR GLL D+T+ ++E L I A I+T G + D F+V D G
Sbjct: 866 IDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVKDVFG 925
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNL 402
V D K + ++ I + + +V+ N+
Sbjct: 926 LKVQDRKRLSIVREAILKVLEEVEENI 952
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM-----RSSVGVVP------- 112
G +D F++ D +GQ + ++ + + +E S + R+ G +P
Sbjct: 834 GMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMRMRAIH 893
Query: 113 -----------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
S YT IE+ G DRPGLL +V+A ++ + + SA I T+ RA + +
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
VKD G I D+KRL +I++ L L+
Sbjct: 954 VKDL-FGLKITDKKRLEEIRERLLAGLK 980
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 5 FAKLIRRMN----PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI 60
F + RM PPRVVIDN + TVI+++ +R G+L +V + NL I A+I
Sbjct: 882 FGHMPMRMRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHI 941
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIK 91
++ G +DVFYV D+ G KI D+ + I+
Sbjct: 942 TTYGVRAVDVFYVKDLFGLKITDKKRLEEIR 972
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
+P++ T + + D PGL S+++ L S+V A I T A +SG A
Sbjct: 790 LPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQDTSGQA 849
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E+ +L ++ L+ L + D+ S I+ A H R+ +
Sbjct: 850 YEETHKLARLASLIEQGLSGHIDI---SEEIARAGFGHMPMRMRAI-------------- 892
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ P V I + YT + I +DRP LL D ++ + + T + A
Sbjct: 893 -HVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDV 951
Query: 291 YYIKHVDGFPISS----EAERQRVMACLE 315
+Y+K + G I+ E R+R++A L+
Sbjct: 952 FYVKDLFGLKITDKKRLEEIRERLLAGLK 980
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TV++V+ +R G+L ++ + ++ L I+ A+IS+ G ++DVFYV
Sbjct: 827 PPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 886
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI + IK +
Sbjct: 887 KDVFGHKIEHGRKLEQIKAAL 907
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-------------- 99
++ I+ G +D F + D +G A ++ + VE S
Sbjct: 756 IVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSGRARLDRELAARKG 815
Query: 100 --------FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
F R V PS+ +T +E+ G DRPGLL +++ +T++ + SA I T
Sbjct: 816 KLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHIST 875
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+ R + +VKD G IE ++L +IK L L
Sbjct: 876 YGERVVDVFYVKD-VFGHKIEHGRKLEQIKAALLAAL 911
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 25/227 (11%)
Query: 102 NSMRSSVGVVP----SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARA 156
++R+ + V P + T I + D PGL S+++ + ++V A+I T N A
Sbjct: 710 EAVRAPLTVEPRVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMA 769
Query: 157 AALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQM 216
++D S G A + +L K +S +VL G RL +
Sbjct: 770 LDTFCIQD-SDGGAFDSPAKLAK-------------------LSACVEQVLSGRARLDRE 809
Query: 217 LFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
L A + + P V + + R +T V + +DRP LL+D +T++ +
Sbjct: 810 LAARKGKLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQIS 869
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRAS 323
+ T +Y+K V G I + +++ A L AA+E A+
Sbjct: 870 SAHISTYGERVVDVFYVKDVFGHKIEHGRKLEQIKAALLAALEDPAA 916
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 72/194 (37%), Gaps = 44/194 (22%)
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEAYQEYYIKHVDGFPI 301
S R T + + + D P L + + ++T A + I+ DG
Sbjct: 724 SHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAF 783
Query: 302 SSEAERQRVMACLEAAIERRASEGLEL--------------------------------- 328
S A+ ++ AC+E + RA EL
Sbjct: 784 DSPAKLAKLSACVEQVLSGRARLDRELAARKGKLPSRAHVFKVPPRVLVDNKPSRSHTVV 843
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQ 388
E+ DR GLL DIT + GL I A IST G +V D F+V D G+ I+
Sbjct: 844 EVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH--------KIE 895
Query: 389 HQIGRTILQVKGNL 402
H GR + Q+K L
Sbjct: 896 H--GRKLEQIKAAL 907
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ T DR GLL+ I RI EY + ++ A+I T+G +V+D FF+TDA P+ DP++ ++
Sbjct: 806 LEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITDAKQQPITDPELCEA 865
Query: 387 IQHQI 391
IQ I
Sbjct: 866 IQQAI 870
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 48 LVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQAT-ISYIKT------------- 92
L L+L I A I +++ G +D F+V +G+ I + +T I++I+
Sbjct: 714 LEQLDLSIHDARIYNANDGMTLDTFFVLGSDGKSIAEDSTRINHIREHLSLTLSDTDNAR 773
Query: 93 ------TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVS 146
T SF +++ V K Y+ +E+ DRPGLL+ + + + + +
Sbjct: 774 DIVQRRTPRAKKSFSVPTETAMAVDEVKNYSVLEIATPDRPGLLARIGRIFVEYDIELQA 833
Query: 147 AEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
A+I T R + + D + I D + I++ +C+ L
Sbjct: 834 AKIQTLGERVEDVFFITD-AKQQPITDPELCEAIQQAICDEL 874
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D +AT++++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M + G+ P K+ +++
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL ++ +TD++ V S E T A A HV
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHV 258
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 84 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSIT 143
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S ++ ++ G+V KE +E+
Sbjct: 144 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQVDVEIATHIT 203
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV
Sbjct: 204 ISDDGPKRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVN----- 258
Query: 169 CAIEDQKRLLKIKKLLCNVLR 189
+D+ + ++++L N LR
Sbjct: 259 --YKDKALIKPLQQVLVNSLR 277
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + SG +ED
Sbjct: 95 DATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDP 154
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N + + +++ +A L + + V+
Sbjct: 155 ELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPK---------------EQVDVEIA 199
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
H+TI D + + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 200 THITISDDGPK-RSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVN 258
Query: 295 HVD 297
+ D
Sbjct: 259 YKD 261
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V + + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I + R Q++ L A I+RR L+
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I RI EY L ++ A+I+T+G +V+D FF+TD G P+
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPL 868
Query: 380 -DPKIVDSIQHQIGRTI 395
DP++ +Q I R +
Sbjct: 869 SDPELCARLQETIVRRL 885
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND T++++ + +R G+L + + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD GQ + D + ++ T+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPELCARLQETI 881
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 18 VIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDIN 77
+ID D AT++Q+ +R G LL+ ++ L DL L +TK +S+D F++ +
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 78 GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT-------- 122
G+K+ D + I+ T+ N +S +M G+ + +E+
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDD 119
Query: 123 ----------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL EV ++TD++C V SAEI T A HV
Sbjct: 120 GPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLVAKDKFHV 169
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P +VI+N++ E TVI+V +R G+L E+ L DL+L I A++++ G +DVFYVT
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DINGQKIGDQATISYIKTTVET 96
D+ G+++ + I+ ++T
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQT 915
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ T IE++G DRPGLL E+++ L+DLS + SA + T +A + +V D +G +
Sbjct: 843 SERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTDL-TGKQVV 901
Query: 173 DQKRLLKIKKLLCNVLRTN 191
+ R I+ L +L N
Sbjct: 902 SEVRQRTIRDRLQTILLDN 920
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 315 EAAIERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
E I SE L +E+ DR GLL ++T L + L I A ++T G K D F+VTD
Sbjct: 835 EIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD 894
Query: 374 ASGNPVDPKIVDSIQHQIGRTILQ 397
+G ++V ++ + R LQ
Sbjct: 895 LTGK----QVVSEVRQRTIRDRLQ 914
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 195 RTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRS 254
R +S + R+L G+ RL +L R R + P + I + T + +
Sbjct: 795 RAKRISDTIERLLEGKERLPVLLERRRANAR-GVEAFAVEPEIVINNELSERLTVIEVSG 853
Query: 255 KDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVM 311
+DRP LL++ L+D+ + V T +A +Y+ + G + SE RQR +
Sbjct: 854 RDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTDLTGKQVVSEV-RQRTI 909
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVVIDN TVI+++ +R G+L +V + + NL I A+I++ G +DVFYV
Sbjct: 882 PPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYV 941
Query: 74 TDINGQKIGDQATISYIK 91
D+ G KI D+ + I+
Sbjct: 942 KDLFGLKITDKKRLDEIR 959
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF-----LNSMRSSVGVVP------- 112
G +D F++ D G + ++ + + +E S R+ G +P
Sbjct: 821 GMALDTFWIQDTAGSAYEETHRLARLSSLIEQALSGQLDIGTEIARAGFGHMPLRMRAIH 880
Query: 113 -----------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
S YT IE+ G DRPGLL +V+A +++ + + SA I T+ RA + +
Sbjct: 881 VPPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFY 940
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVL 188
VKD G I D+KRL +I+ L + +
Sbjct: 941 VKDL-FGLKITDKKRLDEIRDRLLSCM 966
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL S+++ L S+V A I T + A ++D ++G
Sbjct: 777 LPARGVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMHGMALDTFWIQD-TAGS 835
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
A E+ RL ++ L+ L D+ T I+ A H R+ +
Sbjct: 836 AYEETHRLARLSSLIEQALSGQLDIGT---EIARAGFGHMPLRMRAI------------- 879
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V I + + YT + I +DRP LL D +++ + + T + A
Sbjct: 880 --HVPPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVD 937
Query: 290 EYYIKHVDGFPISSEAE----RQRVMACL 314
+Y+K + G I+ + R R+++C+
Sbjct: 938 VFYVKDLFGLKITDKKRLDEIRDRLLSCM 966
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR GLL D+T + E L I A I+T G + D F+V D G + D K +D
Sbjct: 898 IEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDE 957
Query: 387 IQHQI 391
I+ ++
Sbjct: 958 IRDRL 962
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN T+I+V+ +R G+L ++ + L L I A+IS+ G ++DVFYV
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 74 TDINGQKIGDQATISYIKTTV 94
DI G K+ + + I+ V
Sbjct: 884 KDIFGLKVQHERKLEQIRDGV 904
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 23/151 (15%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM-------------RSSVGVV 111
G +D F++ + +G + ++ + T +E S + R+ V V
Sbjct: 764 GMALDSFWIQESDGAAFDTPSKLAKLSTVIEQVLSGRMRLDKELAARKGKLPARAHVFKV 823
Query: 112 P---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
P S +T IE+ G DRPGLL +++A +T L + SA I T+ R + +V
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD 193
KD G ++ +++L +I+ + LR D
Sbjct: 884 KD-IFGLKVQHERKLEQIRDGVLKALRDPAD 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 21/198 (10%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
+ T I + +D PGL S+++ + ++V A+I T N A ++ +S G A +
Sbjct: 723 RSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQ-ESDGAAFD 781
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
+L K+ ++ +VL G RL + L A + +
Sbjct: 782 TPSKLAKLSTVI-------------------EQVLSGRMRLDKELAARKGKLPARAHVFK 822
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
P V I + + +T + + +DRP LL+D +T + + + T +Y
Sbjct: 823 VPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFY 882
Query: 293 IKHVDGFPISSEAERQRV 310
+K + G + E + +++
Sbjct: 883 VKDIFGLKVQHERKLEQI 900
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 262 FDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAER--QRVMACLEAAIE 319
FDT L + V+ V++GRM +E + P + + RV+ I+
Sbjct: 780 FDTPSKLAKLSTVIEQ--VLSGRMRLDKELAARK-GKLPARAHVFKVPPRVI------ID 830
Query: 320 RRASEGLEL-ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+AS L E+ DR GLL D+T + + GL I A IST G +V D F+V D G
Sbjct: 831 NKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVKDIFG 888
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV+++ ++R G+L E+ L L+L IT A++++ G +DVFYV
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 TDINGQKIGDQATISYIKTTV-ETNASFLNSMRS 106
TD+ G ++ ++ I+ V E AS + ++R+
Sbjct: 880 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+FL S+ S T +E+TG DRPGLL E++ L LS ++ SA + T RA
Sbjct: 816 TFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVD 875
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +V D +G + RL I+ + V ++
Sbjct: 876 VFYVTDL-TGTRVMQPDRLAMIRAAVMEVFASD 907
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P PRV I ND TVI++ + +R G+L V + +D +L
Sbjct: 781 DDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPS 113
I A I++ G + DVF+VTD N Q++ D + ++ T+ + S S++G PS
Sbjct: 841 SIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTRLQETIVSQL----SDASTLGAEPS 896
Query: 114 K 114
K
Sbjct: 897 K 897
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL DR GLL+ + RI ++ L I+ A+I+T+G +V+D FFVTDA+ + DP++
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQETI 881
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD 83
E T + + + ++H + + LNL I A I +S + +D + V + +G IGD
Sbjct: 702 EGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEGDGSSIGD 761
Query: 84 Q-ATISYIKTTV-------------------ETNASFLNSMRSSVGVVPSKEYTSIELTG 123
A I I+ + F + R ++ + T IELT
Sbjct: 762 NPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
DRPGLL+ V + D S+ +A+I T R + V D ++
Sbjct: 822 PDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTDANN 865
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV+++ ++R G+L E+ L L+L IT A++++ G +DVFYV
Sbjct: 546 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 605
Query: 74 TDINGQKIGDQATISYIKTTV-ETNASFLNSMRS 106
TD+ G ++ ++ I+ V E AS + ++R+
Sbjct: 606 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 639
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+FL S+ S T +E+TG DRPGLL E++ L LS ++ SA + T RA
Sbjct: 542 TFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVD 601
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +V D +G + RL I+ + V ++
Sbjct: 602 VFYVTDL-TGTRVMQPDRLAMIRAAVMEVFASD 633
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL ++T L L I A ++T G + D F+VTD +G V
Sbjct: 562 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRV 613
>gi|359483143|ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D +AT++++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N +S +M + G+ P K+ +++
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ +TD++ V S E T A A HV + G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVSYR--G 262
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI + ++++L N LR LR PS +S
Sbjct: 263 KAI-----IKPLQQVLGNSLRYF--LRRPSTEEAS 290
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G LL+ ++ L DL L +TK +S++ F++
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGV-VPSKE-------YTSI 119
+G+K+ D T+ I+ TV N +S +M G+ P K+ + +
Sbjct: 135 R-SGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKVDVDVVTHVIV 193
Query: 120 ELTG----------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
E G DRPGLL E+ ++TD++ V SAEI T A HV
Sbjct: 194 EDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHV 246
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
++ T ++L+ DR G L + L DL V + T +A H+ SG +ED
Sbjct: 85 RDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHI--MRSGRKVED 142
Query: 174 QKRLLKIK-KLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
L KI+ ++ N+L+ + + SS + GE F + E+ V+ +
Sbjct: 143 PDTLEKIRLTVINNLLQYHPE--------SSENLAMGE------FFGIKAPEK--KVDVD 186
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
HV + D + + + I + DRP LL + V +TD+ V + T + A +++
Sbjct: 187 VVTHVIVEDDGPK-RSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFH 245
Query: 293 IKH 295
+ +
Sbjct: 246 VSY 248
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V IDN TVI++++++R G+L + L DL+L I A+I++ G +D FYVT
Sbjct: 860 PKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVT 919
Query: 75 DINGQKIGDQATISYIKTT----VETNA 98
D+ G KI ++ + + T +E NA
Sbjct: 920 DLVGSKILNEERLDIARATLLEVLENNA 947
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+EL DR G+LS IT L + L I A I+T G K DTF+VTD G+ KI++
Sbjct: 875 IELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGS----KILNEE 930
Query: 388 QHQIGR-TILQV-KGNLNTPPKLP 409
+ I R T+L+V + N + PK P
Sbjct: 931 RLDIARATLLEVLENNAHAKPKRP 954
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+F + + ++ S ++T IEL DR G+LS ++ L DLS + SA I T+ +
Sbjct: 855 AFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVD 914
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL---RTPSMS 200
+V D G I +++RL + L VL N R P++S
Sbjct: 915 TFYVTDL-VGSKILNEERLDIARATLLEVLENNAHAKPKRPPTVS 958
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 27/264 (10%)
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIE 120
+D ++ D+ Y + ++ DQ I + K ET+A+ + + + + + T I
Sbjct: 709 GTDAAHIADLHYDNYLLSVELPDQ--IRHAKFIAETDAASI-PVATHIATRNFEAITEIT 765
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLK 179
L D P LLS ++ V ++ AEI+T + RA + V +D+KR
Sbjct: 766 LVAPDHPRLLSTITGVCAASGANIEDAEIYTMKDGRALDSIFVGRLYDDP--DDEKR--- 820
Query: 180 IKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLF-ADRDFERLDCVNYNSRPHVT 238
R +++ + +VL GE+RL ++ A + R + P VT
Sbjct: 821 ---------------RARNIADTIEKVLRGEKRLSELESQAGKPARRQQA--FTITPKVT 863
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
I + + +T + + + DR +L L D+ + + T + +Y+ + G
Sbjct: 864 IDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTDLVG 923
Query: 299 FPISSEAERQRVMACLEAAIERRA 322
I +E A L +E A
Sbjct: 924 SKILNEERLDIARATLLEVLENNA 947
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYV 907
Query: 74 TDINGQKIGDQ 84
TD+ GQKI ++
Sbjct: 908 TDLVGQKISNE 918
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I A I+T G KV D+F+VTD G +
Sbjct: 870 DRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTDLVGQKI 915
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 97 NASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARA 156
N +F+ ++ S ++T IE+ DR GLLSE+++VL+DLS + SA I T +
Sbjct: 842 NKAFVIPPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKV 901
Query: 157 AALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA--RVLHGER 211
+V D G I ++ + I L V+ D R PS I+ A R L+ E+
Sbjct: 902 IDSFYVTDL-VGQKISNENKRANITARLKPVMAGEEDEMRERMPSGMIAPASTRSLNSEK 960
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 810 RAGTIGRMIEDVL-------------------AGRKRLPEVI-ATRTKNRRKNKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VTI + +T + + DR LL + L+D+ ++ + T + +Y+
Sbjct: 850 SVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAI 318
+ G IS+E +R + A L+ +
Sbjct: 910 LVGQKISNENKRANITARLKPVM 932
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
N P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 NGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-----QRVMACLE------AAIERRASEGLE--------- 327
Y + DG PI + ER + ++A L I+RR L+
Sbjct: 746 LDTYIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA
Sbjct: 806 IHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ DP+ +Q + + + Q +P
Sbjct: 866 QPLSDPQFCLRLQQALIKELQQENEQQPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDADNQPLSD 870
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVV-TGRMEA 287
N P V I S R + T + I S+D P L TV + + + ++ T
Sbjct: 680 NPLPLVLIRKTSYRVFEGATEIFIYSEDLPTLFPATVAAMDQLNLNIQDARIILTDHGRT 739
Query: 288 YQEYYIKHVDGFPISSEAE-----RQRVMACLEAA------IERRASEGLEL-------- 328
Y + D P+S E +Q + L+ I+RR L+L
Sbjct: 740 LNTYTVLTDDNQPLSENPEYLAHIQQHLTEELDDPEDYPDIIQRRVPRQLKLFTTPTRMT 799
Query: 329 ------------ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
E+ T DR GLL+ I RI E+ + +R+A+IS++G +V+D FF+TD+
Sbjct: 800 ISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITDSQN 859
Query: 377 NPV-DPKIVDSIQHQIGRTILQ 397
P+ DP++ +Q I + + Q
Sbjct: 860 QPISDPELCRELQQAICQQLDQ 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R+ I ND TV+++ + +R G+L + + V+ ++ + KA ISS G + D F++
Sbjct: 795 PTRMTISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFI 854
Query: 74 TDINGQKIGD 83
TD Q I D
Sbjct: 855 TDSQNQPISD 864
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 85 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 144
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ + + I+ T+ N +S ++ ++ G++P KE +++
Sbjct: 145 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSQLALGAAFGLLPPKEQVDVDIATHIN 204
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV +G
Sbjct: 205 ISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHV--SYNG 262
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI ++++L N LR LR P+ SS
Sbjct: 263 KAISK-----PLQQVLANSLRYF--LRRPTTEESS 290
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + +G +E+
Sbjct: 96 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEP 155
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N L + +++ +A L + + V+ +
Sbjct: 156 ELLEAIRLTIINNLIQYHPESSSQLALGAAFGLLPPK---------------EQVDVDIA 200
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
H+ I D D + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 201 THINISD-DGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS 259
Query: 295 HVDGFPISSEAERQRVMA 312
+ +G IS Q+V+A
Sbjct: 260 Y-NGKAISKPL--QQVLA 274
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
N P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 NGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + DG PI + +R + + + L AA I+RR L+
Sbjct: 746 LDTYIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA
Sbjct: 806 IHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ DP+ +Q + + + Q +P
Sbjct: 866 QPLSDPQFCLRLQQALVKELQQENEQQPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDADNQPLSD 870
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV+++ ++R G+L E+ L L+L IT A++++ G +DVFYV
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 TDINGQKIGDQATISYIKTTV-ETNASFLNSMRS 106
TD+ G ++ ++ I+ V E AS + ++R+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+FL S+ S T +E+TG DRPGLL E++ L LS ++ SA + T RA
Sbjct: 816 TFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVD 875
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +V D +G + RL I+ + V ++
Sbjct: 876 VFYVTDL-TGTRVVQPDRLAMIRAAVMEVFASD 907
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 36/210 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
DP++ +Q I + + +G+ +P ++
Sbjct: 869 SDPQLCSRLQEAIVQQLQAGQGSDTSPTRV 898
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ NR G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N S +M + G+ ++ +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGL+ E+ V+ D++ V SAEI T A HV Q G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P I S
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDIDS 300
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV+++ ++R G+L E+ L L+L IT A++++ G +DVFYV
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 TDINGQKIGDQATISYIKTTV-ETNASFLNSMRS 106
TD+ G ++ ++ I+ V E AS + ++R+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+FL S+ S T +E+TG DRPGLL E++ L LS ++ SA + T RA
Sbjct: 816 TFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVD 875
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +V D +G + RL I+ + V ++
Sbjct: 876 VFYVTDL-TGTRVVQPDRLAMIRAAVMEVFASD 907
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ NR G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N S +M + G+ ++ +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGL+ E+ V+ D++ V SAEI T A HV Q G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P I S
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDIDS 300
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT+++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+KI D + ++ T+ N AS +M ++ G+ P E +++
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++ D++ +V S E T A A HV +
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRG-- 249
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 250 ------KPLIKALQQVLANSLR 265
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TV++V+ +R G+L ++ + ++ L I+ A+IS+ G ++DVFYV
Sbjct: 826 PPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI + IK +
Sbjct: 886 KDVFGHKIEHGRKLDQIKAAL 906
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-------------- 99
++ I+ G +D F + D +G A ++ + T VE S
Sbjct: 755 IVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSGRTRLDRELAARKG 814
Query: 100 --------FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
F R V +PS+ +T +E+ G DRPGLL +++ +T++ + SA I T
Sbjct: 815 KLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHIST 874
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+ R + +VKD G IE ++L +IK L L
Sbjct: 875 YGERVVDVFYVKD-VFGHKIEHGRKLDQIKAALLAAL 910
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 25/229 (10%)
Query: 102 NSMRSSVGVVP----SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARA 156
++R+ + V P + T I + D PGL S+++ + ++V A+I T N A
Sbjct: 709 EAVRAPLTVEPRVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMA 768
Query: 157 AALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQM 216
++D S G A + +L K ++ +VL G RL +
Sbjct: 769 LDTFCIQD-SDGGAFDSPAKLAK-------------------LATCVEQVLSGRTRLDRE 808
Query: 217 LFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVY 276
L A + + P V + + R +T V + +DRP LL+D +T++ +
Sbjct: 809 LAARKGKLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQIS 868
Query: 277 HGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEG 325
+ T +Y+K V G I + ++ A L AA+E A++
Sbjct: 869 SAHISTYGERVVDVFYVKDVFGHKIEHGRKLDQIKAALLAALEDPAAKA 917
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL DIT + GL I A IST G +V D F+V D G+ I
Sbjct: 842 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH--------KI 893
Query: 388 QHQIGRTILQVKGNL 402
+H GR + Q+K L
Sbjct: 894 EH--GRKLDQIKAAL 906
>gi|114797974|ref|YP_759248.1| PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
gi|114738148|gb|ABI76273.1| protein-P-II uridylyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 947
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD-- 83
A + V +R G+ ++ L L I A + +S GG ++DVF + D G G+
Sbjct: 742 AVALLVSGKDRTGLFADLAGTLARLGANIVAAQVFTSKGGRIVDVFMLQDARGLPYGEGD 801
Query: 84 --------QATISYIKTTVETN----------ASFLNSMRSSVGVVPSKEYTSIELTGTD 125
QA + + TV + A+FL + S E+ I++ D
Sbjct: 802 GPRLAKLEQAILGALGGTVPSGSVKSRAGRREAAFLVQPSVQIHEEVSIEHMVIDVAARD 861
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLL EV+ VL D+ S+ SA + ++ R +VK S I ++ ++L
Sbjct: 862 RPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDAFYVKPGSPSGKISKARKEALRERLFA 921
Query: 186 NVLRTNGD-LRTPSMSISSARVL 207
+LR + TP+ + +R +
Sbjct: 922 VLLREEPEGPHTPARKLKRSRAV 944
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSG 168
+ P ++ ++G DR GL ++++ L L ++V+A+++T R + ++D
Sbjct: 736 MAPEGGAVALLVSGKDRTGLFADLAGTLARLGANIVAAQVFTSKGGRIVDVFMLQDARGL 795
Query: 169 CAIE-DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLD 227
E D RL K+++ + L PS S+ S RR L
Sbjct: 796 PYGEGDGPRLAKLEQAILGALGGT----VPSGSVKS----RAGRREAAFLV--------- 838
Query: 228 CVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA 287
+P V I + ++ + + ++DRP LL + L DM+ ++ V +
Sbjct: 839 ------QPSVQIHEEVSIEHMVIDVAARDRPGLLHEVAEVLADMKLSIHSAHVGSYGERV 892
Query: 288 YQEYYIKHVDGFP------ISSEAERQRVMACL 314
+ +Y+K G P EA R+R+ A L
Sbjct: 893 FDAFYVK--PGSPSGKISKARKEALRERLFAVL 923
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V I +V VI V + +R G+L EV + L D+ L I A++ S G + D FYV
Sbjct: 840 PSVQIHEEVSIEHMVIDVAARDRPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDAFYV 898
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G LL+ ++ L DL L +TK +++D F++
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
+ G+K+ D + I+ T+ N +S +M G+ P ++ +++
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDVATHVIV 185
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL EV ++ D++ V SAEI T A HV
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHV 238
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 12 MNPPRVVIDNDVCEHATV---------IQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+ PP +D DV H V + +++ +R G+LLEVI+ + D+N+ + A I +
Sbjct: 168 IKPPEKKVDVDVATHVIVEDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDT 227
Query: 63 DGGYLMDVFYVT 74
+G D F+V+
Sbjct: 228 EGLVAKDKFHVS 239
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 TDINGQKIGDQATISYI 90
TD+ GQKI + S I
Sbjct: 909 TDLVGQKISGDSKRSNI 925
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 871 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 839 NRKKSKAFVIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 898
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 899 GEKVIDTFYVTDLVGQKISGDSKR 922
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + A ++ +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 811 RAGTIGRMIEDVL-------------------SGRKRLPEVI-ATRTKNRKKSKAFVIPP 850
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 851 SVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 910
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A L+A + E
Sbjct: 911 LVGQKISGDSKRSNITARLKAVMAEEQDE 939
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 108 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 167
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 168 TDLVGQKISGD 178
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 11 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 69
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 70 RAGTIGRMIEDVL-------------------SGRKRLPEVI-ATRTRNRKKSKAFVIPP 109
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 110 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 169
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 170 LVGQKISGDSKRANITARMKAVMAEEEDE 198
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 124 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 175
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 98 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 157
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 158 GEKVIDTFYVTDLVGQKISGDSKR 181
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V + + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I + R Q++ L A I+RR L+
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I RI EY L ++ A+I+T+G +V+D FF+TD G P+
Sbjct: 809 DAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP+ +Q I
Sbjct: 869 SDPEFCARLQEAI 881
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND T++++ + +R G+L + + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD GQ + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSD 870
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 88 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 147
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ + + I+ T+ N +S ++ ++ G++P KE +++
Sbjct: 148 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSRLALGAAFGLLPPKEQVDVDIATHIN 207
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++TD++ +V S E T A A HV +G
Sbjct: 208 ISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHV--SYNG 265
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
AI ++++L N LR LR P+ SS
Sbjct: 266 KAISK-----PLQQVLANSLRYF--LRRPTTEESS 293
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ T +E+T DR G L + L +L +VV A ++ ++ + +G +E+
Sbjct: 99 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEP 158
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+ L I+ + N L + +++ +A L + + V+ +
Sbjct: 159 ELLEAIRLTIINNLIQYHPESSSRLALGAAFGLLPPK---------------EQVDVDIA 203
Query: 235 PHVTILD-CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
H+ I D C DR + + + + DRP LL D V +TD+ V G T + A ++++
Sbjct: 204 THINISDDCPDR--SLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHV 261
Query: 294 KHVDGFPISSEAERQRVMA 312
+ +G IS Q+V+A
Sbjct: 262 SY-NGKAISKPL--QQVLA 277
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 TDINGQKIGDQATISYI 90
TD+ GQKI + S I
Sbjct: 909 TDLVGQKISGDSKRSNI 925
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 871 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 839 NRKKSKAFVIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 898
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 899 GEKVIDTFYVTDLVGQKISGDSKR 922
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + A ++ +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 811 RAGTIGRMIEDVL-------------------SGRKRLPEVI-ATRTKNRKKSKAFVIPP 850
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 851 SVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 910
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A L+A + E
Sbjct: 911 LVGQKISGDSKRSNITARLKAVMAEEQDE 939
>gi|297823847|ref|XP_002879806.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325645|gb|EFH56065.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 159/377 (42%), Gaps = 40/377 (10%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT-DINGQKI-GDQA 85
T++ V+ + G+ + + +++ L IT+A S+DG + VF+VT DI+ +I D
Sbjct: 21 TIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDSL 80
Query: 86 TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
+ SF ++S+V PS ++ DR GLL +V+ VLT+L ++
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPS--LYLLKFFCRDRKGLLHDVTKVLTELEFTIQ 138
Query: 146 SAEIW-THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG-----DLRTPSM 199
++ T + R + + D + ++R K L VL +G +L P +
Sbjct: 139 RVKVMTTPDGRVLDMFFITDAMD--LLHTKQRQTKTCDHLTAVLGEHGVSCELELAGPEL 196
Query: 200 SISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDR---DYTAVTIRSKD 256
S R LF F+ N S + +L ++ +T + IR D
Sbjct: 197 E-SVQRFSSLPPVAADELFGPDGFD-----NSGSSSNKAVLTVDNQLSPAHTVLQIRCVD 250
Query: 257 RPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ--EYYIKHVDGFPISSEAE-------- 306
+ L +D + D + +G + +++ Y+ E +++ DG I
Sbjct: 251 QKGLFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDGKKIVDPKHQANFCARL 309
Query: 307 RQRVMACLEAAIERRASE-----GLELELYTDDRFGLLSDITRILREYGLCIRRAEI--- 358
++ +M L I R + +EL R + D+T L+ G+CI AEI
Sbjct: 310 KEEMMCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEIGRH 369
Query: 359 STMGRKVKDTFFVTDAS 375
ST+ R+ + F+ D S
Sbjct: 370 STLDRQWEVYRFLLDES 386
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP------VDPKIVDSI 387
D GL S + RI+ E+GL I RA+ ST GR F+VT +P + +++ +
Sbjct: 29 DESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDSLKNRLLSAC 88
Query: 388 QHQIGRTILQVKGNLNTPPKL 408
+G ++ N++ PP L
Sbjct: 89 PSCLGSFYFCLQSNVSKPPSL 109
>gi|262404596|ref|ZP_06081151.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
gi|262349628|gb|EEY98766.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
Length = 876
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E +R + V +P SK+
Sbjct: 739 LDQNGQAIEENRHQALIHHLVQVLEEGRPTTQKVRRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + S G + D++
Sbjct: 799 TLMEFVALDTPGLLASVGATFAELNFDLHAAKITTIGERAEDLF-ILTNSQGARLNDEEE 857
Query: 177 LLKIKKLLCNV 187
L ++L+ NV
Sbjct: 858 QLLRERLIENV 868
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 31/210 (14%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDL--NLVITKAYISSDGGYLMDVFYVTDINGQ 79
D+ +AT + + +R G+ ++ + ++ N+V + + SS G+ +DVFYV D G
Sbjct: 741 DIGRNATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSS-SGHALDVFYVQDSQGL 799
Query: 80 KIG--------------DQATISYIKTTVETNASFLNSMRSSVGVVPSKEY--------T 117
G +QA + ++ V S L ++ + P+ + T
Sbjct: 800 PFGHDDAQRMKQAEQQLEQAALGHLPPPVAYR-SALAGRTAAFAIAPTVAFDDASKANAT 858
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI-EDQKR 176
IE++G DRPGLL+++ V+ L + SA I + RA +V D + QK+
Sbjct: 859 IIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTDHFKKSQLTAGQKQ 918
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARV 206
+LK K+LL + R + P ++ AR
Sbjct: 919 VLK-KQLLQVLERAE---QPPKKPLTQARA 944
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 36/219 (16%)
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAY 288
++S P R+ TA +I + DRP L D +M V V T A
Sbjct: 729 TFDSEPAAKARIDIGRNATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHAL 788
Query: 289 QEYYIKHVDGFPIS-------SEAERQRVMACL----------EAAIERRASEGLE---- 327
+Y++ G P +AE+Q A L A R A+ +
Sbjct: 789 DVFYVQDSQGLPFGHDDAQRMKQAEQQLEQAALGHLPPPVAYRSALAGRTAAFAIAPTVA 848
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL+D+ ++ + I A I G + D F+VTD
Sbjct: 849 FDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTD--- 905
Query: 377 NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQEPARS 415
+ ++ + + + +LQV PPK P AR+
Sbjct: 906 HFKKSQLTAGQKQVLKKQLLQVLERAEQPPKKPLTQARA 944
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V D+ +AT+I+V +R G+L +++ + L + I A+I G +D FYVT
Sbjct: 845 PTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVT 904
Query: 75 D 75
D
Sbjct: 905 D 905
>gi|343513795|ref|ZP_08750890.1| PII uridylyl-transferase [Vibrio sp. N418]
gi|342801414|gb|EGU36880.1| PII uridylyl-transferase [Vibrio sp. N418]
Length = 874
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIG---DQATISYI--------KTTVETNASFLN----SMRSS 107
GY++D F V D +G I +A I ++ T + T + N ++++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFTVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +PSK + T++E D PGLL+ V A DL+ ++ +A+I T RA L +
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 SSGCAIEDQKRLLKIKKLLCNV 187
G E +K LL+ + L NV
Sbjct: 848 EGGKLSEQEKSLLR-EALCANV 868
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G LL+ ++ L DL L +TK +++D F++
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
+ G+K+ D + I+ T+ N +S +M G+ ++ +E+
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPEKKVDVEVATHVIV 226
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL EV ++TD++ V SAEI T A HV
Sbjct: 227 QDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGLVAKDKFHV 279
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS---------------FLNSMRSSVG 109
G MD F+V D +G+ ++ I +E S L + ++
Sbjct: 793 GMAMDTFWVQDTSGEAFDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIH 852
Query: 110 VVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
V P S +T +E+ G DRPGL+ +++A + + SA I T+ RA + +
Sbjct: 853 VPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFY 912
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD 193
VKD G +E++++L K+++ L L + D
Sbjct: 913 VKD-VFGLKVENERKLAKLRQALLGALTSPDD 943
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVV+DN TV++V+ +R G++ ++ + L I A+I++ G +DVFYV
Sbjct: 854 PPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYV 913
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ ++ ++ ++
Sbjct: 914 KDVFGLKVENERKLAKLR 931
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGC 169
+P++ T + + D PGL+ +++ L S+V A I T N A V+D +SG
Sbjct: 749 LPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQD-TSGE 807
Query: 170 AIEDQKRLLKIKKL----LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
A + RL KI L L L + ++R S + R+ R +H
Sbjct: 808 AFDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRM----RAIH----------- 852
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
P V + + + +T + + +DRP L+ D + + + T +
Sbjct: 853 -------VPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGV 905
Query: 286 EAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
A +Y+K V G + +E + ++ L A+
Sbjct: 906 RAVDVFYVKDVFGLKVENERKLAKLRQALLGAL 938
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
LE+ DR GL+ DI + + GL I A I+T G + D F+V D G V+
Sbjct: 870 LEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 922
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
+S P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 DSGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-----------QRVMACLEAAIERRASEGLE--------- 327
Y + DG I +R R A I+RR L+
Sbjct: 746 LDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LE+ DR GLL+ I RI E+ + ++ A+I+T+G +V+D FF+TDA
Sbjct: 806 ILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
P+ DP++ +Q I + + + + +P ++
Sbjct: 866 QPLSDPQLCSRLQEAIIQQLQAGQASEASPSRM 898
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ ++ + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ NR G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+K+ D + I+ T+ N S +M + G+ + +++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGL+ E+ V+ D++ V SAEI T A HV Q G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P I S
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDIDS 300
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQA 85
AT + V + +R + V+ L LNL I A + SS GY +D FYV D +GQ + D+
Sbjct: 719 ATEVFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 86 -TISYIKTTVETNASFLNSM-------------------RSSVGVVPSKEYTSIELTGTD 125
+ I+ T++ + ++ + P Y+++E+T D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLL+ ++ + + +A+I T R + H+ D S + D + +++ +C
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITD-SEDQPLADNALIETLQQAIC 897
Query: 186 NVL 188
L
Sbjct: 898 QEL 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 37/194 (19%)
Query: 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY--QEYYIKHVDGFPISSEA 305
T V + + DRP + F V DM + H + Y +Y+ G P+ E
Sbjct: 720 TEVFVYTPDRPNV-FAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 306 ER--------QRVMACLE---AAIERRASEGLE--------------------LELYTDD 334
R Q + +E I+RR L+ LE+ + D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 335 RFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIGR 393
R GLL+ I RI + L + A+IST+G +V+D F +TD+ P+ D +++++Q I +
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAICQ 898
Query: 394 TILQVKGNLNTPPK 407
+ + L PP+
Sbjct: 899 ELDAHQATL--PPQ 910
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNPPRVV---------IDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
++++K+I+R P R+ I + + + +++ S +R G+L + + + +L
Sbjct: 796 EDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSADRPGLLARIARIFISHDL 855
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A IS+ G + D+F++TD Q + D A I ++ +
Sbjct: 856 RLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PR+ IDN + + AT Q+ S +R G+L++++Q D N+ + A IS+ G + D+F +T
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DINGQKIGDQATI 87
D+ +K+ D T+
Sbjct: 827 DLKNKKVKDTKTL 839
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 29/188 (15%)
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEAYQEYYIKH 295
V L+ ++ +Y AV + +R +L D V Q + +++ + +++
Sbjct: 663 VKFLNYNNNEYGAVIVICPNRSGVLKDIVAGFHSSQINILGSRIISLNNNDIIDVFWVTS 722
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE---------------------------L 328
I + E++RV+ + A++ + E +
Sbjct: 723 SIQKAIIEKNEQERVIQNITASLNQEELETYQTLFQTKIKVEVEPRITIDNQMSKLATTF 782
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSI 387
++ + DR GLL DI +I + + ++ A+IST G KV D F +TD V D K + ++
Sbjct: 783 QILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKVKDTKTLKTL 842
Query: 388 QHQIGRTI 395
+ Q+ + +
Sbjct: 843 EDQLLKIL 850
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 35/189 (18%)
Query: 241 DCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY--QEYYIKHVDG 298
D S + T + I ++ RP L F +C + + H + G +++ G
Sbjct: 696 DSSVANATQMFIHARSRPHL-FSLICATLEQLDLSIHDARIYGASGGMTLDTFFVLDSSG 754
Query: 299 FPISSEAERQR-VMACLEAAIERRAS-----------------------------EGLE- 327
I +A+R R V++ L A+ A +GL
Sbjct: 755 ETIEHDAQRTRHVISELTTALTESAKTNGIATRRTPRQFKSFSIPTRAQITQDHDKGLSI 814
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ + R+ E+G+ I+ A+I T+G +V+D FF+TDA NP+ DP +
Sbjct: 815 LEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDAQQNPITDPDLCQQ 874
Query: 387 IQHQIGRTI 395
I+ I T+
Sbjct: 875 IEAAIRDTL 883
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQ 84
+AT + + + +R + + L L+L I A I + GG +D F+V D +G+ I
Sbjct: 701 NATQMFIHARSRPHLFSLICATLEQLDLSIHDARIYGASGGMTLDTFFVLDSSGETIEHD 760
Query: 85 A-----TISYIKTTVETNA---------------SFLNSMRSSVGVVPSKEYTSIELTGT 124
A IS + T + +A SF R+ + K + +E+
Sbjct: 761 AQRTRHVISELTTALTESAKTNGIATRRTPRQFKSFSIPTRAQITQDHDKGLSILEVISP 820
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + V + + +A+I T R L + D
Sbjct: 821 DRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITD 860
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 6 AKLIRRMNPPRVVIDNDVC----EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
A+LIR ++ DVC T + + + + G+ ++ + + I A I
Sbjct: 701 AELIRDAEAAGRLLTVDVCTDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIM 760
Query: 62 S-DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS---FLNS----------MRSS 107
+ G +DVF V D +G + D+ + + +E S +L R+
Sbjct: 761 TLTTGMALDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTR 820
Query: 108 VGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
V VP SK YT IE+ G DRPG L +V+A LT + SA++ T R
Sbjct: 821 VFKVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVD 880
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL 194
+ +VKD G IE + +L ++++ L + L NG++
Sbjct: 881 VFYVKD-VFGMKIEHEGKLKQVRETLMDTL--NGEV 913
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 33/213 (15%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T + + D PGL S+++ ++ ++V A+I T A + + G A+ D+ +
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 177 LLKIKKLLCNVLRTNGDLRT-----PSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
L ++ +++ N L L PS S RV +
Sbjct: 787 LDRLARIIENALSGKIWLEKELAAKPSGLPSRTRV------------------------F 822
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V + + + + YT + + +DRP L+D LT ++ V T +
Sbjct: 823 KVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVF 882
Query: 292 YIKHVDGFPISSEAE----RQRVMACLEAAIER 320
Y+K V G I E + R+ +M L + R
Sbjct: 883 YVKDVFGMKIEHEGKLKQVRETLMDTLNGEVAR 915
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK----- 382
+E+ DR G L D+T L GL I A+++T G +V D F+V D G ++ +
Sbjct: 841 IEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKDVFGMKIEHEGKLKQ 900
Query: 383 ----IVDSIQHQIGRTI 395
++D++ ++ R++
Sbjct: 901 VRETLMDTLNGEVARSV 917
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV++DN TV++V+ +R G+L ++ + ++ L I+ A+IS+ G ++DVFYV
Sbjct: 826 PPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ + IK +
Sbjct: 886 KDVFGHKVEHGRKLEQIKAAL 906
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-------------- 99
++ I+ G +D F + D +G A ++ + + VE S
Sbjct: 755 IVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLAKLSSCVEQVLSGRTRLDRELAARKG 814
Query: 100 --------FLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
F R V VPS+ +T +E+ G DRPGLL ++++ +T++ + SA I T
Sbjct: 815 KLPSRAHVFKVPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHIST 874
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+ R + +VKD G +E ++L +IK L L
Sbjct: 875 YGERVVDVFYVKD-VFGHKVEHGRKLEQIKAALLAAL 910
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D PGL S+++ + ++V A+I T N A ++D S G A +
Sbjct: 728 TEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQD-SDGGAFDSPA 786
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
+L K +S +VL G RL + L A + + P
Sbjct: 787 KLAK-------------------LSSCVEQVLSGRTRLDRELAARKGKLPSRAHVFKVPP 827
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V + + R +T V + +DRP LL+D +T++ + + T +Y+K
Sbjct: 828 RVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKD 887
Query: 296 VDGFPISSEAERQRVMACLEAAIE 319
V G + + +++ A L AA+E
Sbjct: 888 VFGHKVEHGRKLEQIKAALLAALE 911
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL DIT + GL I A IST G +V D F+V D G+ V+
Sbjct: 842 VEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKVEH------ 895
Query: 388 QHQIGRTILQVKGNL 402
GR + Q+K L
Sbjct: 896 ----GRKLEQIKAAL 906
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I N + +V++V ++R G+L E+ + L DL+L I A+I++ G ++D FYVT
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ GQKI + I+ T+
Sbjct: 892 DLTGQKIVSPDRLETIRKTL 911
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 88 SYIKTTVETNA-------SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDL 140
SY+ +E A +F R +G S ++ +E+ G DRPGLLSE++ L+DL
Sbjct: 809 SYLPEMIEKRAKPRRGTKAFRVVPRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDL 868
Query: 141 SCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMS 200
S + SA I T + +V D +G I RL I+K L L + + P+
Sbjct: 869 SLDIASAHITTFGEKVIDTFYVTDL-TGQKIVSPDRLETIRKTLLQTLESG--VERPAKG 925
Query: 201 ISSARV 206
+ ARV
Sbjct: 926 KTKARV 931
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP-VDPKIVDSIQHQIG 392
DR GLLS++T L + L I A I+T G KV DTF+VTD +G V P +++I+
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLETIR---- 908
Query: 393 RTILQ-VKGNLNTPPK 407
+T+LQ ++ + P K
Sbjct: 909 KTLLQTLESGVERPAK 924
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQK 175
T I + D P LLS ++ + ++V A+I+T + RA + + + A ++++
Sbjct: 734 TEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFDFDA-DERR 792
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R +I KL+ +VL +G P M A+ G + + P
Sbjct: 793 RAERIGKLIEDVL--SGKSYLPEMIEKRAKPRRGTK------------------AFRVVP 832
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + ++ V +R DRP LL + L+D+ + + T + +Y+
Sbjct: 833 RVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTD 892
Query: 296 VDGFPISS----EAERQRVMACLEAAIERRA 322
+ G I S E R+ ++ LE+ +ER A
Sbjct: 893 LTGQKIVSPDRLETIRKTLLQTLESGVERPA 923
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D AT++Q+ +R G L++ + L L L + K + +DG F++T
Sbjct: 11 PVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFIT 70
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+K+ D + I+ T+ N +S +M + G+ ++ +++T
Sbjct: 71 RLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 130
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL E+ ++ D++ V SAEI T A HV G
Sbjct: 131 VKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHV--SYRG 188
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P I S
Sbjct: 189 AALTSS-----LSQVLVNCLRYY--LRRPETDIDS 216
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 11 RMNPPRVVID--NDVCEHATVIQVDSVNRHGILLEVI--QFLVDLNLVITKAYISSDGGY 66
R P +VID D I V + + HG+ V L N+V + ++DG
Sbjct: 708 RQGPAPLVIDVAPDRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDG-M 766
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNAS---------------------FLNSMR 105
+D F+V D + D+ ++ ++ V S F + R
Sbjct: 767 ALDTFWVQDSDRSAYDDEVRVARMRDLVGRTLSGELRPAKALAARRDGPKRTDVFQVTPR 826
Query: 106 SSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
+ S T IE+T DRPGLL +++VL+DL+ ++ SA + T+ RA +VKD
Sbjct: 827 VLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKD- 885
Query: 166 SSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGE 210
G I Q +L ++++ L L G + +I S G+
Sbjct: 886 VFGLKITHQGKLTRVREELLAALDAAGPVIADDGTIRSTATAAGD 930
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI-WTHNARAAALLHVKDQSSGCAIE 172
+ +I + D GL + V+ + ++V A I T + A V+D S A +
Sbjct: 724 RSVAAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQD-SDRSAYD 782
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
D+ R+ +++ L+ R L GE R + L A RD + V +
Sbjct: 783 DEVRVARMRDLV-------------------GRTLSGELRPAKALAARRDGPKRTDV-FQ 822
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
P V I + + T + + ++DRP LLF L+D+ + V T A +Y
Sbjct: 823 VTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFY 882
Query: 293 IKHVDGFPISSEAE----RQRVMACLEAA 317
+K V G I+ + + R+ ++A L+AA
Sbjct: 883 VKDVFGLKITHQGKLTRVREELLAALDAA 911
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL IT +L + L I A ++T G + DTF+V D G
Sbjct: 840 IEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDVFG 888
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
VVIDND AT++ V + +R G+L + + + DL+L +T A I++ ++DVFYVTD+
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 77 NGQKIGDQATISYIKTTVE 95
+G KI D+ + I+ V+
Sbjct: 854 DGNKILDEYSRKAIRDRVQ 872
>gi|261211379|ref|ZP_05925667.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
gi|260839334|gb|EEX65960.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
Length = 876
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETN-ASFLNSMR-----------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E + L + R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTLKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +EL D PGLL+ V A +L+ + +A+I T RA L + + ED+++
Sbjct: 799 TLMELVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEDEEQ 858
Query: 177 LLKIKKLLCNV 187
LL+ +KL+ NV
Sbjct: 859 LLR-EKLIENV 868
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VV+DN + TVI+V ++R G+L E+ + LNL I A+I + G +D FYVT
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 897 DLTGAKIASPQRQAAIK 913
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DR GLL E++ ++ L+ ++ SA I T RA +V D +G I
Sbjct: 846 SNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDL-TGAKIA 904
Query: 173 DQKRLLKIKKLLCNVLRTNG--DLRTPSMSIS 202
+R IK+ L +V G +TP+ + +
Sbjct: 905 SPQRQAAIKRQLLDVFGGPGARGAKTPAAAAT 936
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I R+ ++G+ ++ A+I+T+G +V+D FF+TD GNP+ DP +
Sbjct: 821 LEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFITDHDGNPLSDPAQCEQ 880
Query: 387 IQHQIGRTILQVKGN 401
+Q I + + + G
Sbjct: 881 LQDNIRKALDDIVGK 895
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R + ND+ +V++V S +R G+L + + + + + A I++ G + D+F++
Sbjct: 805 PSRTRLSNDLIAGTSVLEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFI 864
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD +G + D A ++ +
Sbjct: 865 TDHDGNPLSDPAQCEQLQDNI 885
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS++T +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S ++P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFIIPPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL--RTPSMSISSA 204
+ +V D D KR ++ + +L R PS I+ A
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDELRERMPSGIIAPA 951
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + ED+
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPND--EDEL 808
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R R ++ VL G +RL ++ A R R + P
Sbjct: 809 R------------------RAGTIGRMIEDVLSGRKRLPDVI-ATRAKNRKKSKAFIIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEQDE 938
>gi|357145299|ref|XP_003573594.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT+++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 75 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 134
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+KI D + ++ T+ N S +M ++ G+ P E +++
Sbjct: 135 KSSTGRKIDDPELLEAVRLTIINNMLEYHPETSSQLAMGATFGIEPPTEVVDVDIATHID 194
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++ D++ +V S E T A A HV +
Sbjct: 195 IYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRG-- 252
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 253 ------KPLIKALQQVLANSLR 268
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 810 RAGTIGRMIEDVL-------------------SGRKRLPEVI-ATRTRNRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 810 RAGTIGRMIEDVL-------------------SGRKRLPEVI-ATRTRNRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P + IDN + TV+++ ++R G+L E+ L LNL IT A++++ G ++DVFYVT
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 75 DINGQKIGD---QATI 87
D+ G KI QATI
Sbjct: 980 DLTGTKITQPDRQATI 995
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T +E++G DRPGLL E++ L+ L+ ++ SA + T R + +V D +G I
Sbjct: 929 SSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDL-TGTKIT 987
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R I++ + V G L P+
Sbjct: 988 QPDRQATIRRAVMGVFEGEGILGRPA 1013
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL ++T L L I A ++T G +V D F+VTD +G + P +
Sbjct: 935 LEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDLTGTKITQPDRQAT 994
Query: 387 IQHQIGRTILQVKGNLNTP-PK----LPQEPA 413
I+ + + + +G L P PK P+ PA
Sbjct: 995 IRRAV-MGVFEGEGILGRPAPKRGGVRPKAPA 1025
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A + A + E
Sbjct: 910 LVGQKISGDSKRANITARMRAVMAEEEDE 938
>gi|343509231|ref|ZP_08746516.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
gi|342805298|gb|EGU40574.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
Length = 874
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIG---DQATISYI--------KTTVETNASFLN----SMRSS 107
GY++D F V D +G I +A I ++ T + T + N +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +PSK + T++E D PGLL+ V A DL+ ++ +A+I T RA L +
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 SSGCAIEDQKRLLKIKKLLCNV 187
G E +K LL+ + L NV
Sbjct: 848 EGGKLSEQEKSLLR-EALCANV 868
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ++N TV++V ++R G+L E+ L LNL I A++++ G +DVFYVT
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI A S I+
Sbjct: 945 DLMGAKITGAARQSTIR 961
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 95 ETNASFLNSMRSSVGVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVS 146
E A L R + V P S +T +E++G DRPGLL E++ L+ L+ ++ S
Sbjct: 868 EVMAKKLPKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIAS 927
Query: 147 AEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSI 201
A + T RA + +V D G I R I++ L V + D P +
Sbjct: 928 AHVATFGERAVDVFYVTDL-MGAKITGAARQSTIRRALIGVFEGSFDEEEPPRRV 981
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 884 TDLVGQKISGD 894
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 785
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ NVL G +RL +++ A R R ++ P
Sbjct: 786 RAGTIGRMIENVL-------------------AGRKRLPEVI-ATRTRNRKKSKAFDIPP 825
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 826 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 885
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 886 LVGQKISGDSKRANITARMKAVMAEEQDE 914
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 846 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D
Sbjct: 834 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 893
Query: 173 DQKR 176
D KR
Sbjct: 894 DSKR 897
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DQKR 176
D KR
Sbjct: 918 DSKR 921
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR RR ++ P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR----NRRKNKAFVIP--------------P 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DQKR 176
D KR
Sbjct: 918 DSKR 921
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------HRKKNKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DRPGLLSE++AVL+DLS + SA I T + +V D
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 917
Query: 173 DQKR 176
D KR
Sbjct: 918 DSKR 921
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------HRKKNKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+I+ND+ TVI+V +R G+L E+ L DL+L I A++++ G +DVFYVT
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DINGQKI 81
D+ G++I
Sbjct: 894 DLVGKQI 900
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S T IE++G DRPGLL E+++VL+DLS + SA + T +A + +V D
Sbjct: 843 SGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTD 894
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL ++T +L + L I A ++T G K D F+VTD G +I+ +
Sbjct: 849 IEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK----QILSEV 904
Query: 388 QHQIGRTILQVKGNLNTPPKLPQEPARS 415
+ + R LQ P P+ A S
Sbjct: 905 RQRAIRDRLQSVMLDKDAPVAPERLAES 932
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V++ N + TVI+V+ ++R G+L ++ L DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKI 81
TD+ GQK+
Sbjct: 886 TDLVGQKV 893
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+DIT +L + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DR GLL++++AVL DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTD 887
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 635 DLVGHKISNATRQGNIK 651
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 584 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 642
Query: 173 DQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
+ R IK+ L +L RTNG R+P +
Sbjct: 643 NATRQGNIKRKLLALLGAENGARTNG--RSPQAA 674
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI-QHQIG 392
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ KI ++ Q I
Sbjct: 596 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQGNIK 651
Query: 393 RTILQVKGNLN---TPPKLPQEPA 413
R +L + G N T + PQ A
Sbjct: 652 RKLLALLGAENGARTNGRSPQAAA 675
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LLS ++ ++V A+I+T N RA + + + ++++
Sbjct: 477 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRALDTILISREFD-TDDDERR 535
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R ++ K++ +VL +G P M A R + + P
Sbjct: 536 RAERVGKVIEDVL--SGKAHLPDM------------------LAKRTKPKKAARAFKVEP 575
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + ++D+ + + T + +Y+
Sbjct: 576 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 635
Query: 296 VDGFPISSEAERQ 308
+ G IS+ A RQ
Sbjct: 636 LVGHKISN-ATRQ 647
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID E ATVI+V +R G+L E+ + L D L I A+++ G +D FYVT
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 75 DINGQKIGDQATISYIKTTVET 96
D G+KI +A + + +E
Sbjct: 829 DARGRKITSEAVLDEVHAALEA 850
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ ASEG +E+ DR GLL++++R L ++ L IR A ++ G + D+F+VTDA G
Sbjct: 773 IDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDARG 832
Query: 377 NPVDPKIVDSIQHQIGRTILQVKGNLNTPPKLPQ 410
+ + V H ++ L+ P+ PQ
Sbjct: 833 RKITSEAVLDEVHA------ALEAVLDRAPEPPQ 860
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ T IE++G DRPGLL+E+S L+D + S+ SA + RA +V D + G I
Sbjct: 778 SEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTD-ARGRKIT 836
Query: 173 DQKRLLKIKKLLCNVL 188
+ L ++ L VL
Sbjct: 837 SEAVLDEVHAALEAVL 852
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 901
Query: 173 DQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
+ R IK+ L +L RTNG R+P +
Sbjct: 902 NATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 14 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSKKLPALSITPNRQLQHFTVQ 73
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 74 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 125
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 126 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 155
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G +
Sbjct: 85 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG-----QA 139
Query: 384 VDSIQHQIGRTIL 396
+DS Q +I R +L
Sbjct: 140 LDSQQREILRNVL 152
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P V I + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRRKKSAFTIPPSVIISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIATRLKAVMSEQEDE 916
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL DR GLL+ + RI ++ L + A+I+T+G +V+D F+VTDA G P+ DP + +
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDADGRPLADPGLCSA 876
Query: 387 IQHQI 391
+QH +
Sbjct: 877 LQHAL 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 24 CEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIG 82
E T I + + ++H + + LNL I A I+S + +D + V D +G IG
Sbjct: 701 SEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIG 760
Query: 83 DQ-ATISYIKTTV-------ETNASFLN------------SMRSSVGVVPSKEYTSIELT 122
+ A I+ I+ + E S +N S + ++ + + IELT
Sbjct: 761 NNPARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYTDTMRSASLIELT 820
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ V + D SV++A+I T R + +V D
Sbjct: 821 APDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTD 862
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I D A++I++ + +R G+L V + +D +L + A I++ G + DVFYVT
Sbjct: 802 PQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVT 861
Query: 75 DINGQKIGDQATISYIK 91
D +G+ + D S ++
Sbjct: 862 DADGRPLADPGLCSALQ 878
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V I + + R++ T + I + D+ TV + + ++ ++T + +
Sbjct: 112 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 171
Query: 292 YI--KHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE----------- 327
YI H +G I + ER Q + L A I+RR L+
Sbjct: 172 YIVLDH-EGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIH 230
Query: 328 ---------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ P
Sbjct: 231 NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQP 290
Query: 379 V-DPKIVDSIQHQI 391
+ DP++ +Q I
Sbjct: 291 LSDPQLCSRLQEAI 304
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 204 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 263
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 264 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSRLQEAI 304
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 895 DLVGHKISNATRQGNIK 911
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 844 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 902
Query: 173 DQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
+ R IK+ L +L RTNG R+P +
Sbjct: 903 NATRQGNIKRKLLALLGAENGARTNG--RSPQAA 934
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 856 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 912
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 913 KLLALLGAENGARTNGRSPQAAA 935
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 908 TDLVGQKISGD 918
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 838 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 897
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 898 GEKVIDTFYVTDLVGQKISGDSKR 921
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 810 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 849
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 850 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 910 LVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 706 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 765
Query: 387 IQHQI 391
+Q I
Sbjct: 766 LQEAI 770
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 670 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 729
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 730 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAI 770
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 36/210 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
DP++ +Q I + + + + ++P ++
Sbjct: 869 SDPQLCSRLQEAIVQQLQAGQASESSPTRM 898
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|392955012|ref|ZP_10320563.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
gi|391857669|gb|EIT68200.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
Length = 894
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL T DR GLLS I RI ++ GL + A+I T+G + +D FF+TDA P+ DP +D
Sbjct: 820 LELVTADRPGLLSMIGRIFQKRGLLLDAAKIGTIGERAEDVFFITDADHKPISDPSQLDE 879
Query: 387 IQHQIGRTI 395
++ + RT+
Sbjct: 880 LREVLVRTL 888
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 884 TDLVGQKISGD 894
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 814 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 873
Query: 153 NARAAALLHVKDQSSGCAIEDQKR 176
+ +V D D KR
Sbjct: 874 GEKVIDTFYVTDLVGQKISGDSKR 897
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 846 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + A ++ +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 785
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL +G R P + + AR R + P
Sbjct: 786 RAATIGRMIEDVL--SGRKRLPEVIATRAR------------------NRKKSKAFVIPP 825
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 826 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 885
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A ++A + E
Sbjct: 886 LVGQKISGDSKRANITARMKAVMAEEEDE 914
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 779 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 838
Query: 74 TDINGQKI-GD 83
TD+ GQKI GD
Sbjct: 839 TDLVGQKISGD 849
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 102 NSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
N +S V+P S ++T IE+ DRPGLLSE++AVL+DLS + SA I T
Sbjct: 769 NRKKSKAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTF 828
Query: 153 NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL--RTPSMSISSA 204
+ +V D D KR +L + +L R PS I+ A
Sbjct: 829 GEKVIDTFYVTDLVGQKISGDSKRANITARLKAVMAEEEDELRERMPSGIIAPA 882
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS+IT +L + L I+ A I+T G KV DTF+VTD G +
Sbjct: 801 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 846
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I+T + RA +HV + + ++ +
Sbjct: 682 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPDDS-DELR 740
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I +++ +VL G +RL +++ A R R + P
Sbjct: 741 RAATIGRMIEDVL-------------------SGRKRLPEVI-ATRTRNRKKSKAFVIPP 780
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
V I + +T + + DRP LL + L+D+ + + T + +Y+
Sbjct: 781 SVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 840
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASE 324
+ G IS +++R + A L+A + E
Sbjct: 841 LVGQKISGDSKRANITARLKAVMAEEEDE 869
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A++++ G ++DVFYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G +I + S I+
Sbjct: 894 DLVGHQITNTTRQSRIR 910
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+F + R + S ++T IE+ G DRPG+LSE++ V++DLS + SA + T +
Sbjct: 829 AFKITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVID 888
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRT 196
+ +V D G I + R +I+K L L GD+ T
Sbjct: 889 VFYVTDL-VGHQITNTTRQSRIRKKLL-ALFGEGDIIT 924
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR G+LS+IT ++ + L I A ++T G KV D F+VTD G+ +
Sbjct: 855 DRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDLVGHQI 900
>gi|326509743|dbj|BAJ87087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT+++V +R G LL+ + L +L L + KA + D + F +T
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+KI D + ++ T+ N AS +M ++ G+ P E +++
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL + ++ D++ +V S E T A A HV +
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVGLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRG-- 249
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 250 ------KPLIKALQQVLANSLR 265
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R + S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D
Sbjct: 835 RVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD 894
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
G I + R IK+ L +L RTNG R+P +
Sbjct: 895 L-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 911
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 912 KLLALLGAENGARTNGRSPQAAA 934
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P V I + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRRKKSAFTIPPSVIISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|320155590|ref|YP_004187969.1| (Protein-PII) uridylyltransferase [Vibrio vulnificus MO6-24/O]
gi|319930902|gb|ADV85766.1| [Protein-PII] uridylyltransferase [Vibrio vulnificus MO6-24/O]
Length = 873
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GYLMDVFYVTDINGQKI---GDQATISYI--------KTTVETNASFLN----SMRSSVG 109
GY++D F V D +GQ I +A I ++ T V+T + +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL+ A D+ ++ A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+Q+ L+ +KL+ N+
Sbjct: 850 GRLSEEQELQLR-EKLIHNI 868
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 193 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 252
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + +G I ER Q + L A I+RR L+
Sbjct: 253 YIVLDNEGGSIGDNPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHN 312
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+
Sbjct: 313 DAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPL 372
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 373 SDPQLCSQLQDAI 385
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 285 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 344
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 345 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 385
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQEAI 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAI 880
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQEAI 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAI 880
>gi|262166338|ref|ZP_06034075.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
gi|262026054|gb|EEY44722.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
Length = 622
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 425 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 484
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 485 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 544
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 545 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEEEEQ 604
Query: 177 LLKIKKLLCNVLR 189
LL+ +KL+ NV R
Sbjct: 605 LLR-EKLIENVAR 616
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D +T++Q+ +R G L++ + L DL L + K + ++G F++T
Sbjct: 12 PVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFIT 71
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+K+ D + I+ T+ N +S +M + G+ ++ +++T
Sbjct: 72 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 131
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL E+ ++ D++ V SAEI T A HV G
Sbjct: 132 VKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHV--SYGG 189
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P S
Sbjct: 190 AALNSS-----LSQVLVNCLRYY--LRRPETDTES 217
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 818 DLVGHKISNATRQGNIK 834
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 767 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 825
Query: 173 DQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
+ R IK+ L +L RTNG R+P +
Sbjct: 826 NATRQGNIKRKLLALLGAENGARTNG--RSPQAA 857
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 779 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIKR 835
Query: 394 TILQVKGNLN---TPPKLPQEPA 413
+L + G N T + PQ A
Sbjct: 836 KLLALLGAENGARTNGRSPQAAA 858
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G +RL +M+ A R R + P V I + +T + + DRP LL D
Sbjct: 799 VLSGRQRLPEMI-ATRTKSRRKKSAFTIPPSVIISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIATRLKAVMSEQEDE 916
>gi|27365205|ref|NP_760733.1| PII uridylyl-transferase [Vibrio vulnificus CMCP6]
gi|30173035|sp|Q8DBG3.1|GLND_VIBVU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|27361352|gb|AAO10260.1| protein-P-II uridylyltransferase [Vibrio vulnificus CMCP6]
Length = 873
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GYLMDVFYVTDINGQKI---GDQATISYI--------KTTVETNASFLN----SMRSSVG 109
GY++D F V D +GQ I +A I ++ T V+T + +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLADGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL+ A D+ ++ A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+Q+ L+ +KL+ N+
Sbjct: 850 GRLSEEQELQLR-EKLIHNI 868
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 880
>gi|37680743|ref|NP_935352.1| PII uridylyl-transferase [Vibrio vulnificus YJ016]
gi|62288143|sp|Q7MIF8.1|GLND_VIBVY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|37199492|dbj|BAC95323.1| protein-P-II uridylyltransferase [Vibrio vulnificus YJ016]
Length = 873
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GYLMDVFYVTDINGQKI---GDQATISYI--------KTTVETNASFLN----SMRSSVG 109
GY++D F V D +GQ I +A I ++ T V+T + +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL+ A D+ ++ A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+Q+ L+ +KL+ N+
Sbjct: 850 GRLSEEQELQLR-EKLIHNI 868
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN TVI+++ +R G+L ++ + L L+L ++ A IS+ G +DVFYV
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSSV 108
D+ G K+ + ++ I+ + T + S+ +S
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASA 957
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 32/171 (18%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSV-----GVVPSKE---- 115
G +D F+V D ++ + + S R ++ G +PS+
Sbjct: 802 GMALDTFWVQDATDGPFDQPTKLARLSAAIHKAMSGELKTRQALREKAAGALPSRTRVFK 861
Query: 116 --------------YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
+T IEL G DRPGLLS+++ L LS V SA+I T+ A + +
Sbjct: 862 VPPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFY 921
Query: 162 VKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERR 212
VKD G +E +L I++ L L G + SA GE+R
Sbjct: 922 VKD-VFGLKVEHASKLAAIREKLLTALAEPGSV--------SASAQAGEKR 963
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+EL DR GLLSDI R L + L + A+IST G D F+V D G V+
Sbjct: 879 IELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDVFGLKVE 931
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 26/204 (12%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQK 175
T + + D PGL S ++ + S+V A I+T + A V+D + G +
Sbjct: 764 TEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATDG-PFDQPT 822
Query: 176 RLLKIKKLLCNVLRTNGDLRT-PSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+L ++ + + +G+L+T ++ +A L R+ +
Sbjct: 823 KLARLSAAIHKAM--SGELKTRQALREKAAGALPSRTRV-----------------FKVP 863
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V I + + +T + + +DRP LL D L + V + T A +Y+K
Sbjct: 864 PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVK 923
Query: 295 HVDGFPISSEAE----RQRVMACL 314
V G + ++ R++++ L
Sbjct: 924 DVFGLKVEHASKLAAIREKLLTAL 947
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I N + +VI V ++R G+L E+ L DL+L I A+I++ G ++D FYV+
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 75 DINGQKIGDQATISYIK 91
D+ GQKI + A + I+
Sbjct: 894 DLTGQKIDNPARLKTIR 910
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++ I+++G DRPGLLSE++ L+DLS + SA I T + +V D +G I+
Sbjct: 843 SNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDL-TGQKID 901
Query: 173 DQKRLLKIKKLLCNVLRTNGDLR 195
+ RL I+ L L+ R
Sbjct: 902 NPARLKTIRDRLIATLQGEAGQR 924
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PKIVDSIQHQIG 392
DR GLLS+IT L + L I A I+T G KV DTF+V+D +G +D P + +I+ ++
Sbjct: 855 DRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDLTGQKIDNPARLKTIRDRLI 914
Query: 393 RTI 395
T+
Sbjct: 915 ATL 917
>gi|343500492|ref|ZP_08738384.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|418477317|ref|ZP_13046450.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820208|gb|EGU55034.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|384575057|gb|EIF05511.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 873
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++H + V+ L N + A + +S GY++D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D NG + + + IK T ++T N +++ V +P SK+
Sbjct: 739 LDQNGDVVDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A D + +A+I T RA L + +S G E+Q++
Sbjct: 799 TLLEFVALDTPGLLATVGATFADSGVHLHAAKITTIGERAEDLFIITSESGGKLSEEQQQ 858
Query: 177 LLKIKKLLCNV 187
L+ KL+ NV
Sbjct: 859 ELR-DKLIKNV 868
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL IT A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+T+
Sbjct: 896 DLLGAQISAPTRQAAIKSTL 915
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTDL-LGAQIS 903
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L ++L
Sbjct: 904 APTRQAAIKSTLLHLL 919
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQ 165
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + + +
Sbjct: 728 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 787
Query: 166 SSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
++ +R +I + + VL G L+ P + R G++ H+
Sbjct: 788 YERDE-DEARRATRIGETIEQVL--EGKLKLPDAV--ARRTTRGKQ--HKA--------- 831
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
++ P VTI + YT + + DRP LL++ ++ + + V T
Sbjct: 832 -----FSVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGE 886
Query: 286 EAYQEYYIKHVDGFPISSEAERQRVMACL 314
A +Y+ + G IS+ + + + L
Sbjct: 887 RARDVFYVTDLLGAQISAPTRQAAIKSTL 915
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 880
>gi|18405098|ref|NP_565908.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|3355486|gb|AAC27848.1| expressed protein [Arabidopsis thaliana]
gi|330254601|gb|AEC09695.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949474|gb|AEP31950.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 411
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 160/379 (42%), Gaps = 44/379 (11%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT-DINGQKI-GDQA 85
TV+ V+ + G+ + + +++ L IT+A S+DG + VF+VT DI+ KI D
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 86 TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
+ SF ++S+V PS ++ DR GLL +V+ VLT+L ++
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPS--LYLLKFFCRDRKGLLHDVTKVLTELEFTIQ 138
Query: 146 SAEIW-THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG-----DLRTPSM 199
++ T + R + + D + ++R K L VL +G +L P
Sbjct: 139 RVKVMTTPDGRVLDMFFITDAMD--LLHTKQRQTKTCDHLTAVLGEHGVSCELELAGPE- 195
Query: 200 SISSARVLHGERRLHQM--LFADRDF--ERLDCVNYNSRPHVTILDCS-DRDYTAVTIRS 254
L +R + L AD F + D +S V +D +T + IR
Sbjct: 196 -------LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRC 248
Query: 255 KDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ--EYYIKHVDGFPISSE-------A 305
D+ L +D + D + +G + +++ Y+ E +++ DG I A
Sbjct: 249 VDQKGLFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDGNKIMDPKHQANFCA 307
Query: 306 ERQRVMAC-LEAAIERRASE-----GLELELYTDDRFGLLSDITRILREYGLCIRRAEI- 358
+ M C L I R + +EL R + D+T L+ G+CI AEI
Sbjct: 308 RLKEEMVCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEIG 367
Query: 359 --STMGRKVKDTFFVTDAS 375
ST+ R+ + F+ D S
Sbjct: 368 RHSTLDRQWEVYRFLLDES 386
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP------VDPKIVDSI 387
D GL S + RI+ E+GL I RA+ ST GR F+VT +P + +++ +
Sbjct: 29 DESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSLKNRLLSAC 88
Query: 388 QHQIGRTILQVKGNLNTPPKL 408
+G ++ N++ PP L
Sbjct: 89 PSCLGSFYFCLQSNVSKPPSL 109
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 880
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 880
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID D AT++Q+ +R G LL+ ++ L DL L +TK +++D F++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 128
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
+G+K+ D + I+ T+ N +S +M G+ P ++ +++
Sbjct: 129 R-SGRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKAVVDIATRIVI 187
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ ++ D + V SAEI T A HV
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGLVAKDKFHV 240
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
R+VI++D + +++ +++ +R G+LLE+I+ + D N+ + A I ++G D F+V+
Sbjct: 184 RIVIEDDGPKR-SMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGLVAKDKFHVS 241
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 880
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV+++ ++R G+L E+ L L+L IT A++++ G +DVFYV
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD+ G ++ ++ I+ V
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAV 900
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
+FL S+ S T +E+TG DRPGLL E++ L LS ++ SA + T RA
Sbjct: 816 TFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVD 875
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+ +V D +G + RL I+ + V
Sbjct: 876 VFYVTDL-TGTRVVQPDRLAMIRAAVMEVF 904
>gi|260775287|ref|ZP_05884184.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608468|gb|EEX34633.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 873
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++H + V+ L N + A + +S GY++D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSRDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D +GQ + + + IK T ++T N +++ V +P SK+
Sbjct: 739 LDQHGQAVHESRHKAVIKHLAHVLKDGRPTKIKTRRVPRNLQHFKVKTRVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A DL + +A+I T RA L + + G E+Q+
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLDLHLHAAKITTIGERAEDLFIITSEQGGKLTEEQEA 858
Query: 177 LLKIKKLLCNV 187
L+ + L NV
Sbjct: 859 QLR-ESLTANV 868
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I N + +V+++ ++R G+L E+ + L DL+L I A+I++ G ++D FYVT
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DINGQKI 81
D+ GQKI
Sbjct: 892 DLTGQKI 898
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 88 SYIKTTVETNA-------SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDL 140
+Y+ +E A +F R +G S ++ +E+ G DRPGLLSE++ L+DL
Sbjct: 809 TYLPEIIEKRARPRRSTRAFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDL 868
Query: 141 SCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
S + SA I T + +V D +G I RL I + L L
Sbjct: 869 SLDIASAHITTFGEKVIDTFYVTDL-TGQKIVSPDRLDAICRALLETL 915
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP-VDPKIVDSI 387
DR GLLS++T L + L I A I+T G KV DTF+VTD +G V P +D+I
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLDAI 907
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID D AT++Q+ +R G LL+ ++ L DL L +TK +++D F++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
G+K+ D + I+ T+ N +S +M G+ P ++ +++
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ ++ D + V SAEI T A HV
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHV 237
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 12 MNPPRVVIDNDVCEHA---------TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+ PP +D D+ H +++ +++ +R G+LLE+I+ + D N+ + A I +
Sbjct: 167 IKPPEKKVDVDIATHIVVEDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDT 226
Query: 63 DGGYLMDVFYVTDINGQ 79
+G D F+V+ G+
Sbjct: 227 EGLVAKDKFHVSYRGGK 243
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ I RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPQLCSRLQEAI 881
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|89092087|ref|ZP_01165042.1| PII uridylyl-transferase [Neptuniibacter caesariensis]
gi|89083822|gb|EAR63039.1| PII uridylyl-transferase [Oceanospirillum sp. MED92]
Length = 899
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHG-TVVTGRMEAYQE 290
P V I S R + T + I S D L TV + + + +VT E
Sbjct: 695 PLVLIRQTSHRVFEGATEIFIYSADIKNLFAATVAAMDQLHLNIQDARIIVTDSGEVLNT 754
Query: 291 YYIKHVDGFPISSEAE-----RQRVMACLE------AAIERRASEGLEL----------- 328
Y + D P+S + +QR++ L+ I+RR ++L
Sbjct: 755 YTVLSDDNTPLSENPDHLKSIKQRLIEELDDPNDYPEIIQRRVPRQMKLFATPTQVFLSN 814
Query: 329 ---------ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
E+ T DR GLL+ I I + L +R+A+I+++G +V+D FF+TD G P+
Sbjct: 815 DAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFITDEQGLPI 874
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q++I
Sbjct: 875 SDPELCQQLQNEI 887
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V + ND H TV++V + +R G+L + NL + KA I+S G + D F++
Sbjct: 807 PTQVFLSNDAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFI 866
Query: 74 TDINGQKIGD 83
TD G I D
Sbjct: 867 TDEQGLPISD 876
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V++ N + TV++V+ ++R G+L E+ L DL+L I A I++ G ++D FYV
Sbjct: 825 PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 74 TDINGQKIGDQ 84
TD+ G KI ++
Sbjct: 885 TDLLGTKITNE 895
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL++IT +L + L I A I+T G KV DTF+VTD G +
Sbjct: 847 DRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDLLGTKI 892
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T +E+ DRPGLL+E++AVL DLS + SA I T + +V D G I
Sbjct: 835 SNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDL-LGTKIT 893
Query: 173 DQKRLLKIKKLLCNVLRTNGD-LRT--PSMSISSA 204
++ R I L V+ D LR+ PS I+ A
Sbjct: 894 NENRQGNISARLKAVMAEQEDELRSGMPSGIIAPA 928
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T I + D P LLS ++ + ++ A+I+T + A + ++ ++ +R
Sbjct: 728 TEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILINREFPVDEDELRR 787
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH 236
I +++ +VL +G R P + + A+ +R ++M ++ P
Sbjct: 788 AATIGRMIEDVL--SGKKRLPEVIATRAKA----KRRNKM--------------FDIPPS 827
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
V + + +T V + DRP LL + L D+ ++ + T + +Y+ +
Sbjct: 828 VILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDL 887
Query: 297 DGFPISSEAERQRVMACLEAAIERRASE 324
G I++E + + A L+A + + E
Sbjct: 888 LGTKITNENRQGNISARLKAVMAEQEDE 915
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 541 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 600
Query: 387 IQHQI 391
+Q +I
Sbjct: 601 LQDEI 605
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 505 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 564
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 565 SLQNAKIATLGERVEDVFFITDANNHPLSD 594
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ++N TV++V ++R G+L E+ L LNL IT A++++ G +DVFY+T
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I I+ IK +
Sbjct: 899 DLMGARITSPTRIATIKRAL 918
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQS 166
SV S YT +E++G DRPGLL E+++ L+ L+ ++ SA + T RA + ++ D
Sbjct: 842 SVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDL- 900
Query: 167 SGCAIEDQKRLLKIKKLL 184
G I R+ IK+ L
Sbjct: 901 MGARITSPTRIATIKRAL 918
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 22/225 (9%)
Query: 80 KIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTD 139
K+ A + + + ET A + + + P++ T + + D P LLS ++
Sbjct: 704 KVDLPAQLGHARFVRETEAKGGDPLATRYSFDPARGVTVLTVLAPDHPWLLSVIAGACAS 763
Query: 140 LSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSM 199
++V A+I+T + G A++ + + + R + + R
Sbjct: 764 AGANIVDAQIYT-------------TTDGLALDT----ISVSR---EFERDDDEGRRAGR 803
Query: 200 SISS-ARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRP 258
+ + R L GE RL +M+ A R+ + + P V++ + YT V + DRP
Sbjct: 804 VVDALERALRGEMRLPEMMAAKRN-AKGRTRPFRVEPEVSVNNQWSHRYTVVEVSGLDRP 862
Query: 259 KLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
LL++ L+ + + V T A +YI + G I+S
Sbjct: 863 GLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDLMGARITS 907
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G+L EV L DL+L I A+I++ G ++D FYVT
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DINGQKIGDQ 84
D+ G KI ++
Sbjct: 913 DLVGAKITNE 922
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DR GLLSEV+AVL+DLS + SA I T + +V D G I
Sbjct: 862 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VGAKIT 920
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA 204
++ R I L VL D R PS I+ A
Sbjct: 921 NENRQANIAARLKAVLAGEVDEARERMPSGIIAPA 955
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLLS++T +L + L I A I+T G KV DTF+VTD G +
Sbjct: 868 IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I T + RA + V + S ++ +
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTADGRALDTILVNREFS-VDEDETR 813
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I KL+ +VL G +RL +++ A R R + P
Sbjct: 814 RAASIGKLIEDVLS-------------------GRKRLPEVI-ASRTRARKRSKAFTVTP 853
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VTI + +T + + DR LL + L+D+ + + T + +Y+
Sbjct: 854 EVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD 913
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+ G I++E + + A L+A + E E
Sbjct: 914 LVGAKITNENRQANIAARLKAVLAGEVDEARE 945
>gi|387770803|ref|ZP_10126978.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
gi|386903553|gb|EIJ68363.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG-RMEAYQEYYIKHVDGFPISSEAE 306
T + I KD+P L + C +++ + ++ ++T A+ + + +DG ++ +
Sbjct: 682 TGIFIYCKDQPSLFYKVACVISNKKLSIHDAQIMTSLDGYAFDTFIVTEIDGSLLNFDRR 741
Query: 307 RQRVMACLEA----------------------AIERR-----ASEGLELELYTDDRFGLL 339
R+ + +E E R + E+ELY D+ GLL
Sbjct: 742 RKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVTTEVRFLNTIKNTHTEMELYALDKTGLL 801
Query: 340 SDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+D++RI E+ L I+ A+I+T+G KV+D F +T+A +
Sbjct: 802 ADVSRIFSEHNLNIQNAKITTVGEKVEDFFILTNAENKAL 841
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKTT-----------------VE 95
++S GY D F VT+I+G + +++ + +K+ V
Sbjct: 715 MTSLDGYAFDTFIVTEIDGSLLNFDRRRKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVT 774
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T FLN+++++ +T +EL D+ GLL++VS + ++ + ++ +A+I T +
Sbjct: 775 TEVRFLNTIKNT--------HTEMELYALDKTGLLADVSRIFSEHNLNIQNAKITTVGEK 826
Query: 156 AAALLHVKDQSSGCAIEDQKRLL 178
+ + + E Q+ LL
Sbjct: 827 VEDFFILTNAENKALTEQQRFLL 849
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA +P+ DP++
Sbjct: 817 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQEAI 881
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 781 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV----ETNASFLNSMRSSV 108
+ A I++ G + DVF++TD + + D S ++ + N+ MR S+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSRLQEAIIKQLSVNSQPSGEMRLSI 899
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID D AT++Q+ +R G LL+ ++ L DL L +TK +++D F++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
G+K+ D + I+ T+ N +S +M G+ P ++ +++
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ ++ D + V SAEI T A HV
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHV 237
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 12 MNPPRVVIDNDVCEHA---------TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+ PP +D D+ H +++ +++ +R G+LLE+I+ + D N+ + A I +
Sbjct: 167 IKPPEKKVDVDIATHIVVEDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDT 226
Query: 63 DGGYLMDVFYVTDINGQ 79
+G D F+V+ G+
Sbjct: 227 EGLVAKDKFHVSYRGGK 243
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V+IDN + TV+++ ++R G+L E+ L+L IT A++++ G +DVFYV
Sbjct: 827 PPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD+ G ++ + I+ V
Sbjct: 887 TDLTGTRVTQPDRQAAIRAAV 907
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T +E+TG DRPGLL E++ + LS ++ SA + T RA + +V D +G +
Sbjct: 837 SSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTDL-TGTRVT 895
Query: 173 DQKRLLKIKKLLCNVL 188
R I+ + +V
Sbjct: 896 QPDRQAAIRAAVMDVF 911
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 38/194 (19%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V I + + R++ T + I + D+ TV + + ++ ++T + +
Sbjct: 170 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 229
Query: 292 YI--KHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE----------- 327
YI H +G I + ER Q + L A I+RR L+
Sbjct: 230 YIVLDH-EGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH 288
Query: 328 ---------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P
Sbjct: 289 NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHP 348
Query: 379 V-DPKIVDSIQHQI 391
+ DP++ +Q I
Sbjct: 349 LSDPQLCRQLQDAI 362
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 262 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 321
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 322 SLQNAKIATLGERVEDVFFITDANNHPLSD 351
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + I N + + TVI++ ++R G+L + + L DLNL I A+I + G +DVFYV
Sbjct: 835 PTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYV 894
Query: 74 TDINGQKIGDQATISYIKTTVET 96
TD+ G KI + I +E
Sbjct: 895 TDLTGGKITSKVRQKRIHEALEA 917
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +TR L + L I A I T G K D F+VTD +G + K+
Sbjct: 851 IEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGGKITSKVRQKR 910
Query: 388 QHQ 390
H+
Sbjct: 911 IHE 913
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
S ++T IE++G DR GLL ++ L+DL+ ++ SA I T+ +A + +V D + G
Sbjct: 845 SDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG 900
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQEAI 880
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAI 880
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 36 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 95
Query: 387 IQHQI 391
+Q I
Sbjct: 96 LQDAI 100
Score = 45.4 bits (106), Expect = 0.061, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 4 EFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLV 54
++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 1 DYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLS 60
Query: 55 ITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 61 LQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAI 100
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVV+DN TVI+V+ +R G+L +V + L I A+I++ G +DVFYV
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ ++ ++ +++ +
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVE----------------TNASFLNSMRSSV 108
G +D F++ D G + ++ I +E N+ MR+ +
Sbjct: 782 GMALDTFWIQDAGGGSLEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSVVGGRMRA-I 840
Query: 109 GVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALL 160
V P S +T IE+ G DRPGLL +V+A +T + SA I T+ RA +
Sbjct: 841 HVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVF 900
Query: 161 HVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+VKD G ++++++L +++ L L
Sbjct: 901 YVKD-VFGLKVQNERKLAQLRSALIEAL 927
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P++ T + + D GL S ++ L ++V A I T + A ++D + G
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQD-AGGG 796
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
++E RL KI ++ VL +G LR + +A + G R + +
Sbjct: 797 SLEAPHRLAKISAVIEQVL--SGRLRLATEIEKAANSVVGGR--------------MRAI 840
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V + + + +T + + +DRP LL D +T + + T + A
Sbjct: 841 HVP--PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVD 898
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+Y+K V G + +E + ++ + L A+ R E
Sbjct: 899 VFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+T + GL I A I+T G + D F+V D G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VVI+N + + TV++V +R G+L E+ L DL+L I+ A++++ G +DVFYVT
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSK 114
D+ G+++ ++ + +++ + S L+ R P++
Sbjct: 895 DLLGKQVINETRQATLRSRLR---SILDPARPKSATEPAR 931
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEV 133
T + ++IG + ++ TVE N++ S T +E++G DRPGLL E+
Sbjct: 816 TLLKKKRIGTRGVEAF---TVEPEVVINNAL--------SDRLTVLEVSGRDRPGLLYEL 864
Query: 134 SAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD 193
++ L+DLS + SA + T +A + +V D I + + + L + LR+ D
Sbjct: 865 TSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGKQVINETR-----QATLRSRLRSILD 919
Query: 194 LRTPSMSISSARV 206
P + ARV
Sbjct: 920 PARPKSATEPARV 932
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR GLL ++T L + L I A ++T G K D F+VTD G V + +
Sbjct: 850 LEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGKQVINETRQAT 909
Query: 388 QHQIGRTILQVKGNLNTPPKLPQEPAR 414
R+IL PK EPAR
Sbjct: 910 LRSRLRSILD-----PARPKSATEPAR 931
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G+L EV L DL+L I A+I++ G ++D FYVT
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DINGQKI 81
D+ G KI
Sbjct: 891 DLVGSKI 897
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DR GLLSEV+AVL+DLS + SA I T + +V D G I
Sbjct: 840 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VGSKIT 898
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISS---ARVLHGER 211
+ R + I L VL D R PS I+ +RV HG +
Sbjct: 899 SENRQMNIAARLKAVLAGEVDEARERMPSGIIAPTPVSRVPHGSK 943
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLLS++T +L + L I A I+T G KV DTF+VTD G+ +
Sbjct: 846 IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I T + RA + V + S A ++ +
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFS-VAEDETR 791
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I KL+ +VL +G R P + S RV R + P
Sbjct: 792 RAASIGKLIEDVL--SGRKRLPEVIASRTRVKKRSR------------------AFTVTP 831
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VTI + +T + + DR LL + L+D+ + + T + +Y+
Sbjct: 832 EVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD 891
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+ G I+SE + + A L+A + E E
Sbjct: 892 LVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRVV+DN TVI+V+ +R G+L +V + L I A+I++ G +DVFYV
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ ++ ++ +++ +
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVE----------------TNASFLNSMRSSV 108
G +D F++ D G + ++ I +E N+ MR+ +
Sbjct: 782 GMALDTFWIQDAGGGSLEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSVVGGRMRA-I 840
Query: 109 GVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALL 160
V P S +T IE+ G DRPGLL +V+A +T + SA I T+ RA +
Sbjct: 841 HVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVF 900
Query: 161 HVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
+VKD G ++++++L +++ L L
Sbjct: 901 YVKD-VFGLKVQNERKLAQLRSALIEAL 927
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGC 169
+P++ T + + D GL S ++ L ++V A I T + A ++D + G
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQD-AGGG 796
Query: 170 AIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCV 229
++E RL KI ++ VL +G LR + +A + G R + +
Sbjct: 797 SLEAPHRLAKISAVIEQVL--SGRLRLATEIEKAANSVVGGR--------------MRAI 840
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P V + + + +T + + +DRP LL D +T + + T + A
Sbjct: 841 HVP--PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVD 898
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+Y+K V G + +E + ++ + L A+ R E
Sbjct: 899 VFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL D+T + GL I A I+T G + D F+V D G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V I + + R++ T + I + D+ TV + + ++ ++T + +
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 292 YI--KHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE----------- 327
YI H +G I + ER Q + L A I+RR L+
Sbjct: 748 YIVLDH-EGGSIGNNPERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIH 806
Query: 328 ---------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ P
Sbjct: 807 NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQP 866
Query: 379 V-DPKIVDSIQHQI 391
+ DP++ +Q I
Sbjct: 867 LSDPQLCSRLQEAI 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSRLQEAI 880
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G+L EV L DL+L I A+I++ G ++D FYVT
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DINGQKI 81
D+ G KI
Sbjct: 891 DLVGSKI 897
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DR GLLSEV+AVL+DLS + SA I T + +V D G I
Sbjct: 840 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VGSKIT 898
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA---RVLHGER 211
+ R + I L VL D R PS I+ R HG +
Sbjct: 899 SENRQMNIAARLKAVLAGEVDEARERMPSGIIAPTPVPRASHGSK 943
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLLS++T +L + L I A I+T G KV DTF+VTD G+ +
Sbjct: 846 IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 22/212 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I T + RA + V + S A ++ +
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFS-VAEDETR 791
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I KL+ +VL +G + P + S R R + P
Sbjct: 792 RAASIGKLIEDVL--SGRKKLPDVIASRTRSKKRSR------------------AFTVTP 831
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VTI + +T + + DR LL + L+D+ + + T + +Y+
Sbjct: 832 EVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD 891
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+ G I+SE + + A L+A + E E
Sbjct: 892 LVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGD 83
D+ G KI +
Sbjct: 894 DLVGHKISN 902
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 901
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSA 204
+ R I++ L VL +T S +A
Sbjct: 902 NATRQGNIRRKLLGVLSGENGSKTNGRSSQAA 933
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FFVTDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q I + ++N+ P L
Sbjct: 877 LQDAIVEQL-----SVNSEPTL 893
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF+VTD Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSRLQDAI 881
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGD 83
D+ G KI +
Sbjct: 894 DLVGHKISN 902
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 901
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSA 204
+ R I++ L VL +T S +A
Sbjct: 902 NATRQGNIRRKLLGVLSGENGSKTNGRSSQAA 933
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
++++T DR GLL+ I RI ++ L ++ A I+T+G +V+D FFVTD +G+PV DP++
Sbjct: 821 VDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTDLNGDPVSDPELCQH 880
Query: 387 IQ 388
+Q
Sbjct: 881 LQ 882
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +VVI ND+ TV+ + +++R G+L + + V L++ A I++ G + DVF+V
Sbjct: 805 PTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFV 864
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD+NG + D +++ T+
Sbjct: 865 TDLNGDPVSDPELCQHLQDTL 885
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V ++R G+L ++ + L NL I A+I + G ++DVFYVT
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 75 DINGQKIGDQATISYIKTTV 94
D++G KI A + ++ +
Sbjct: 913 DLHGAKITTAARQTAVRRQI 932
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL D+TRIL + L I A I T G +V D F+VTD G +
Sbjct: 868 IEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHGAKI 919
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGN 401
DP++ +Q I + + +G+
Sbjct: 869 SDPQLCSRLQEAIVQQLQAGQGS 891
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 865
Query: 380 -DPKIVDSIQHQIGRTILQVKGN 401
DP++ +Q I + + +G+
Sbjct: 866 SDPQLCSRLQEAIVQQLQAGQGS 888
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 858 TDADNQPLSDPQLCSRLQEAI 878
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G+L E+ L DL+L I A+I++ G ++D FYVT
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 75 DINGQKIGDQ 84
D+ G KI ++
Sbjct: 907 DLVGAKITNE 916
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DR GLLSE++AVL+DLS + SA I T + +V D G I
Sbjct: 856 SNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VGAKIT 914
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSARVLHGERRLH 214
++ R I L VL D R PS I+ A H R H
Sbjct: 915 NENRQGNIAARLKAVLAGEVDEARERMPSGIIAPA---HSPRSSH 956
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLLS+IT +L + L I A I+T G KV DTF+VTD G +
Sbjct: 862 IEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 913
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I T + RA + V + S ++ +
Sbjct: 749 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFS-VDEDEMR 807
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I KL+ +VL G +RL +++ A R + + P
Sbjct: 808 RAASIGKLIEDVLS-------------------GRKRLPEVI-ASRTRAKKRSKAFTVTP 847
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VTI + +T + + DR LL + L+D+ + + T + +Y+
Sbjct: 848 EVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTD 907
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+ G I++E + + A L+A + E E
Sbjct: 908 LVGAKITNENRQGNIAARLKAVLAGEVDEARE 939
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 694 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 753
Query: 387 IQHQIGRTI 395
+Q I R +
Sbjct: 754 LQEAIVRHL 762
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I ND TV+++ + +R G+L + ++ +L + A I++ G + DVF++T
Sbjct: 679 PLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 738
Query: 75 DINGQKIGDQATISYIKTTV 94
D + Q + D S ++ +
Sbjct: 739 DAHNQPLSDPQLCSRLQEAI 758
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V+++N + TVI+V ++R G+L ++ + + LNL I A+IS+ G ++DVFYVTD+
Sbjct: 844 VIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDL 903
Query: 77 NGQKIGD 83
GQKI +
Sbjct: 904 TGQKIAN 910
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 36/190 (18%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHA-------TVIQVDSVNRHGILLEVIQ---FLVDLNLVI 55
A+LIRR + +V HA TV+ D H LL I F+ N+V
Sbjct: 718 AELIRRADAENRKFAAEVTTHAFEGVTEITVLAPD----HPRLLSSIAGACFVTGANIVD 773
Query: 56 TKAYISSDGGYLMDVFYVT-----DINGQKIGDQATISYIKT---------TVETNASFL 101
+ ++DG + +D +++ D + ++ G++ T +KT TV A+
Sbjct: 774 AQIDTTTDG-FALDTIFISRELPDDADERRRGERITDLILKTLRGEAPLPDTVARKAAAK 832
Query: 102 NSMRSS-------VGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA 154
M++ V S YT IE+TG DRPGLL +++ + L+ ++ SA I T
Sbjct: 833 GRMKAFRVASDVIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGE 892
Query: 155 RAAALLHVKD 164
R + +V D
Sbjct: 893 RVVDVFYVTD 902
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL D+TR + L I A IST G +V D F+VTD +G +
Sbjct: 857 IEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDLTGQKI 908
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 38/194 (19%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V I + + R++ T + I + D+ TV + + ++ ++T + +
Sbjct: 89 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 148
Query: 292 YI--KHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE----------- 327
YI H +G I + ER Q + L A I+RR L+
Sbjct: 149 YIVLDH-EGGSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH 207
Query: 328 ---------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P
Sbjct: 208 NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHP 267
Query: 379 V-DPKIVDSIQHQI 391
+ DP++ +Q I
Sbjct: 268 LSDPQLCRQLQDAI 281
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 181 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 240
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 241 SLQNAKIATLGERVEDVFFITDANNHPLSD 270
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQEAI 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQEAI 880
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGN 401
DP++ +Q I + + +G+
Sbjct: 869 SDPQLCSRLQEAIVQQLQAGQGS 891
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 IQHQIGRTI 395
+Q I R +
Sbjct: 877 LQEAIVRHL 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I ND TV+++ + +R G+L + ++ +L + A I++ G + DVF++T
Sbjct: 802 PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 75 DINGQKIGDQATISYIKTTV 94
D + Q + D S ++ +
Sbjct: 862 DAHNQPLSDPQLCSRLQEAI 881
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQEAI 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQEAI 880
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P VTI + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRRKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P VTI + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRRKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P VTI + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRKKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSKKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V I N + TVI+V+ ++R G+L ++ + DL+L I A I++ G ++D FYV
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 TDINGQKIGD---QATIS 88
TD+ GQK+ + QA+I+
Sbjct: 886 TDLFGQKVTNDNRQASIA 903
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL+D+T ++ + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S ++T IE+ DRPGLL++++AV+ DLS + SA I T + +V D
Sbjct: 836 SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +M+ A R R + P VTI + +T + + DRP LL D
Sbjct: 799 VLSGKQRLPEMI-ATRTKSRKKKSAFTIPPSVTISNGLSNKFTVIEVECLDRPGLLADMT 857
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+ D+ ++ + T + +Y+ + G ++++ + + L+A + + E
Sbjct: 858 AVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL DR GLL+ I RI ++ L ++ A+I+T+G +V+D FFVTDA P+ DP++
Sbjct: 817 VELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPELCAR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q I + Q+ + +P ++
Sbjct: 877 LQQTI---VTQLSASSPSPAQI 895
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
DE+ +I+R P P+V I ND TV+++ + +R G+L ++ + +D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS 99
+ A I++ G + DVF+VTD + Q + D + ++ T+ T S
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVTQLS 886
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD 83
E T I + + ++H + + LNL I A I +S + +D + V + G IGD
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIGD 761
Query: 84 ------QATISYIKTTVETN--------------ASFLNSMRSSVGVVPSKEYTSIELTG 123
Q S I T + + F + + ++ + T +ELT
Sbjct: 762 NPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+++ + D SV +A+I T R + V D
Sbjct: 822 PDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTD 862
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPQLCSRLQEAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQEAI 881
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 646 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 705
Query: 387 IQHQI 391
+Q I
Sbjct: 706 LQDAI 710
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 610 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 669
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 670 SLQNAKIATLGERVEDVFFITDANNHPLSD 699
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV ++ + ++ ++T +
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I +R +++ L A I+RR L+
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + RI E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 865
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 866 SDPQLCSRLQEAI 878
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 858 TDADNQPLSDPQLCSRLQEAI 878
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V+++N + + TV+++ ++R G+L ++ + + LNL I A+I++ G ++DVFYVTD+
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 77 NGQKIGDQATISYIKTTVET 96
GQKI + I+ +E
Sbjct: 906 TGQKIANIGRQEIIRERLEA 925
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL D+TR + L I A I+T G KV D F+VTD +G KI +
Sbjct: 859 VEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQ----KIANIG 914
Query: 388 QHQIGRTILQ--VKGNLNTPPKLP 409
+ +I R L+ V GN++ P
Sbjct: 915 RQEIIRERLEAAVGGNVDMSGSAP 938
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 38 HGILLEVIQ---FLVDLNLVITKAYISSDGGYLMDVFYVTDI--------NGQKIGDQAT 86
H LL ++ F N+V + ++DG L +F ++ G++I D +
Sbjct: 755 HPKLLSIVAGACFATGANIVDAQIDTTTDGFALDTIFISRELPKDEDERRRGKRITDLIS 814
Query: 87 ISYI-KTTVETNASFLNSMRSSVGVVP-----------SKEYTSIELTGTDRPGLLSEVS 134
+ KT + N + SM+S V S +YT +E+TG DRPGLL +++
Sbjct: 815 KALKGKTRLVGNQNGKASMKSRVKAFKVMAEVLVNNSISDDYTVVEITGLDRPGLLFDLT 874
Query: 135 AVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDL 194
++ L+ ++ SA I T + + +V D +G I + R I++ L + N D+
Sbjct: 875 RAISTLNLNIGSAHITTFGEKVVDVFYVTDL-TGQKIANIGRQEIIRERLEAAVGGNVDM 933
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG PI + ER + + L A I+RR L+
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ + ++ ++ L ++ A+I+T+G +V+D FFVTDA P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTP 405
DP+ +Q + + + Q +P
Sbjct: 869 SDPQFCLRLQQALVKELQQENEQQPSP 895
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L V Q +D +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD + Q + D
Sbjct: 861 TDADNQPLSD 870
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + +I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V + ++ +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N + D
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSD 869
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 75 DINGQKIGD 83
D+ G KI +
Sbjct: 929 DLVGHKISN 937
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 878 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 936
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSA 204
+ R I++ L VL +T S +A
Sbjct: 937 NATRQGNIRRKLLGVLGAENGSKTNGRSSQAA 968
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI-QHQIG 392
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ KI ++ Q I
Sbjct: 890 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQGNIR 945
Query: 393 RTILQVKGNLN 403
R +L V G N
Sbjct: 946 RKLLGVLGAEN 956
>gi|258620994|ref|ZP_05716028.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|424807474|ref|ZP_18232882.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
gi|258586382|gb|EEW11097.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|342325416|gb|EGU21196.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
Length = 876
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
LL+ +KL+ NV
Sbjct: 859 LLR-EKLIENV 868
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V + N + TVI+V+ ++R G+L EV L DL+L I A+I++ G ++D FYVT
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DINGQKIGDQ 84
D+ G KI ++
Sbjct: 913 DLVGAKITNE 922
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DR GLLSEV+AVL+DLS + SA I T + +V D G I
Sbjct: 862 SNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VGAKIT 920
Query: 173 DQKRLLKIKKLLCNVLRTNGD---LRTPSMSISSA 204
++ R + I L VL D R PS I+ A
Sbjct: 921 NENRQINIAARLKAVLAGEVDEARERMPSGIIAPA 955
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLLS++T +L + L I A I+T G KV DTF+VTD G +
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQK 175
T I + D P LL+ ++ ++V A+I T + RA + V + S ++ +
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFS-VDEDEMR 813
Query: 176 RLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP 235
R I KL+ +VL G +RL +++ A R + + P
Sbjct: 814 RAASIGKLIEDVLS-------------------GRKRLPEVI-ASRTRAKKRSKAFTVTP 853
Query: 236 HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKH 295
VT+ + +T + + DR LL + L+D+ + + T + +Y+
Sbjct: 854 EVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD 913
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+ G I++E + + A L+A + E E
Sbjct: 914 LVGAKITNENRQINIAARLKAVLAGEVDEARE 945
>gi|258627348|ref|ZP_05722132.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
gi|258580386|gb|EEW05351.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
Length = 876
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
LL+ +KL+ NV
Sbjct: 859 LLR-EKLIENV 868
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P V I ND TV+++ + +R G+L + + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQDAI 881
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND T++++ + +R G+L + + ++ +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQDAI 881
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N TVI+V+ ++R G+L E+ + DL+L I A+I++ G ++D FYVT
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DINGQKIGD 83
D+ G KI +
Sbjct: 894 DLVGHKISN 902
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ G DRPGLLSE++ +++DLS + SA I T + +V D G I
Sbjct: 843 SNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKIS 901
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSA 204
+ R I++ L VL +T S +A
Sbjct: 902 NATRQGNIRRKLLGVLGAENGSKTNGRSSQAA 933
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLLS++T ++ + L I A I+T G KV D+F+VTD G+ + + Q I R
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNA---TRQGNIRR 911
Query: 394 TILQVKGNLN 403
+L V G N
Sbjct: 912 KLLGVLGAEN 921
>gi|262170770|ref|ZP_06038448.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
gi|261891846|gb|EEY37832.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
Length = 876
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
LL+ +KL+ NV
Sbjct: 859 LLR-EKLIENV 868
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VV+DN + TVI+V ++R G+L ++ + LNL I A+I + G +D FYVT
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 75 DINGQKI---GDQATI 87
D+ G KI QATI
Sbjct: 898 DLTGAKIIAPQRQATI 913
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 92 TTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
TT++ A+F + V S YT IE++G DR GLL +++ ++ L+ ++ SA I T
Sbjct: 826 TTIKPIAAFTIAPEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVT 885
Query: 152 HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLR 195
RA +V D +G I +R IK+ L V + + + R
Sbjct: 886 FGERAVDAFYVTDL-TGAKIIAPQRQATIKRQLLEVFQPSAEKR 928
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL D+T + + L I A I T G + D F+VTD +G + I
Sbjct: 853 IEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTDLTGAKI---IAPQR 909
Query: 388 QHQIGRTILQVKGNLNTPPKLPQEPARS 415
Q I R +L+V P + PAR
Sbjct: 910 QATIKRQLLEV-----FQPSAEKRPARG 932
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P +VIDN ATVI+V ++R G+L ++ + +LNL I A+I + G +D FYVT
Sbjct: 793 PDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVT 852
Query: 75 DINGQKI---GDQATI 87
D+ G KI QATI
Sbjct: 853 DLTGGKILSASRQATI 868
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL D+T + L I A I T G + D+F+VTD +G + + S
Sbjct: 808 IEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGGKI---LSASR 864
Query: 388 QHQIGRTILQV 398
Q I R +L+V
Sbjct: 865 QATIKRQLLEV 875
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQEAI 881
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I ND TV+++ + +R G+L + ++ +L + A I++ G + DVF++T
Sbjct: 802 PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 75 DINGQKIGDQATISYIKTTV 94
D + Q + D S ++ +
Sbjct: 862 DAHNQPLSDPQLCSRLQEAI 881
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 26/232 (11%)
Query: 88 SYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
+ I+ T A S R V+ ++ T + + TD PGL S ++ L S+V A
Sbjct: 716 ALIREAEATGAPLTVSTR----VLEARSVTEVTVYVTDHPGLFSRIAGALAVAGASIVDA 771
Query: 148 EIWTH-NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARV 206
I T N RA V+D + G A + +L ++ L+ L +L I R
Sbjct: 772 RIHTMTNGRALDTFWVQD-AQGGAFDSPHKLARLSVLIEQALSGRLNL---DQEIRKVR- 826
Query: 207 LHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVC 266
R+ RL V R V I + + +T + + +DRP LL D
Sbjct: 827 --------------REPSRLRAVQVPGR--VVIDNHASNTHTVIELNGRDRPGLLHDMTA 870
Query: 267 CLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
+++ + + T + A +Y+K V G I +E + + L AA+
Sbjct: 871 AISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKIENERKLASLREALLAAL 922
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVET-----------------NASFLNSMRSS 107
G +D F+V D G ++ + +E S L +++
Sbjct: 779 GRALDTFWVQDAQGGAFDSPHKLARLSVLIEQALSGRLNLDQEIRKVRREPSRLRAVQVP 838
Query: 108 VGVV----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVK 163
VV S +T IEL G DRPGLL +++A +++ + SA I T+ RA + +VK
Sbjct: 839 GRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVK 898
Query: 164 DQSSGCAIEDQKRLLKIKK-LLCNVLRTNGDL 194
D G IE++++L +++ LL + NGD+
Sbjct: 899 D-VFGLKIENERKLASLREALLAALGPANGDV 929
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RVVIDN TVI+++ +R G+L ++ + + L I A+I++ G +DVFYV
Sbjct: 838 PGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV 897
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G KI ++ ++ ++ +
Sbjct: 898 KDVFGLKIENERKLASLREAL 918
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+EL DR GLL D+T + E GL I A I+T G + D F+V D G
Sbjct: 854 IELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFG 902
>gi|90580969|ref|ZP_01236770.1| PII uridylyl-transferase [Photobacterium angustum S14]
gi|90437847|gb|EAS63037.1| PII uridylyl-transferase [Vibrio angustum S14]
Length = 873
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
A L + P +++ T + V S ++ + V+ L NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMR---------------SSVG 109
GY +D F V D NG+ I + + I+ T+ + + S R + V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTT-IRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVS 790
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA-ALLHVKDQS 166
+P+K + T +EL D PGLL++V AV + + S+ +A+I T RA + V DQ
Sbjct: 791 FLPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERAEDFFILVNDQG 850
Query: 167 SGCAIEDQKRL 177
++E QK L
Sbjct: 851 CNLSVEQQKVL 861
>gi|255560331|ref|XP_002521182.1| amino acid binding protein, putative [Ricinus communis]
gi|223539629|gb|EEF41213.1| amino acid binding protein, putative [Ricinus communis]
Length = 214
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P ++ID D AT +QV +R G L++ ++ L DL L + K + ++G F++T
Sbjct: 8 PVLLIDQDSDSDATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFIT 67
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+K+ D + I+ T+ N +S +M + G+ + +++
Sbjct: 68 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLDVDIATHIH 127
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL E+ ++ D++ V SAEI T A HV G
Sbjct: 128 VKDDGPKRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKFHV--SYRG 185
Query: 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A+ + ++L N LR LR P + S
Sbjct: 186 AALNSS-----MSQVLVNCLRYY--LRRPETDVDS 213
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DND TVI+V++ +R +L + + L + +++ A+I++ G D FYVT
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G KI D++ + I+ + AS
Sbjct: 885 DLTGAKITDESRMDTIRQALLDAAS 909
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 21/209 (10%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T + + D PGL ++ + +++ A I T A ++ G ++++
Sbjct: 727 TLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFAEERQ 786
Query: 177 LLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH 236
L +I++ + + + G+L P + A R ++ ++ RP
Sbjct: 787 LARIEQAIADAIANRGEL-VPKL-------------------AKRPLKQTRAGAFDVRPR 826
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHV 296
V + + +T + + ++DR LL L + Q +V + A +Y+ +
Sbjct: 827 VLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDL 886
Query: 297 DGFPISSEAERQRV-MACLEAAIERRASE 324
G I+ E+ + A L+AA + R +E
Sbjct: 887 TGAKITDESRMDTIRQALLDAASDARQAE 915
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR LL+ + R L E + ++ A I+ G + DTF+VTD +G + D +D+
Sbjct: 840 IEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDLTGAKITDESRMDT 899
Query: 387 IQHQI 391
I+ +
Sbjct: 900 IRQAL 904
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P + IDN + TV+++ ++R G+L ++ L LNL IT A++++ G +DVFYVT
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 75 DINGQKIGD---QATI 87
D+ G KI QATI
Sbjct: 882 DLTGTKITQPDRQATI 897
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T +E++G DRPGLL +++ L+ L+ ++ SA + T RA + +V D +G I
Sbjct: 831 SSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDL-TGTKIT 889
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTP 197
R I++ + V + P
Sbjct: 890 QPDRQATIRRAVMGVFEGDAAAARP 914
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL D+T L L I A ++T G + D F+VTD +G +
Sbjct: 837 LEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDLTGTKI 888
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
+S P V I + + ++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 SSEPLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + DG PI ++ ER Q + L A I+R L+
Sbjct: 746 LDTYIVLDADGAPIGNDPERIQEIRQGLTEALRNPEDYLTIIKRHVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ DR GLL+ I ++ E+ L ++ A+I+TMG +V+D FFVT+A
Sbjct: 806 IHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTNADN 865
Query: 377 NPV-DPKIVDSIQHQIGRTILQVKGNLNTP 405
P+ D ++ +Q + + + Q + +P
Sbjct: 866 QPLSDLQLCTQLQQALVKQLSQENEHQPSP 895
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T+I+V + +R G+L + Q ++ +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
T+ + Q + D
Sbjct: 861 TNADNQPLSD 870
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 2 DDEFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
DD A +RR RV +DND T+++V + ++ G+L ++ L L I A I+
Sbjct: 772 DDNSASALRR---ERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTV-ETNASFLNSMRSSVGVVPS 113
+ ++DVFYV D +GQK+ ++ IK TV ET L+ R++ GV P+
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET----LHGERNNKGVKPA 877
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PKIVDS 386
+E+ D+ GLL IT L GL I A+I+T +V D F+V D G VD P+ VD+
Sbjct: 797 VEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESVDA 856
Query: 387 IQHQIGRTILQVKGNLNTPP 406
I+ + T+ + N P
Sbjct: 857 IKQTVLETLHGERNNKGVKP 876
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID D AT++Q+ +R G LL+ ++ L DL L ++K +++D F++
Sbjct: 67 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 126
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
G+K+ D + I+ T+ N +S +M G+ P + I++
Sbjct: 127 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 185
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ ++ D + V SAEI T A HV
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHV 238
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 12 MNPPRVVIDNDVCEHATV---------IQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+ PP +D D+ H V + +++ +R G+LLE+I+ + D N+ + A I +
Sbjct: 168 IKPPVKKVDIDIATHIVVEDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDT 227
Query: 63 DGGYLMDVFYVT 74
+G D F+V+
Sbjct: 228 EGLVAKDKFHVS 239
>gi|323495364|ref|ZP_08100442.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
gi|323310435|gb|EGA63621.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
Length = 873
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++H + V+ L N + A + +S GY++D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYI--------KTTVETNASFLN----SMRSSVGVVP--SKEY 116
D +G+ I + +A I ++ +T ++T N +++ V +P SK+
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRQTKIKTRRIPRNLQHFKVKTKVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A DL + +A+I T RA L + ++ G E++++
Sbjct: 799 TLLEFVALDTPGLLATVGATFADLGVHLHAAKITTIGERAEDLFIITSKNGGKLTEEEQQ 858
Query: 177 LLKIKKLLCNV 187
L + L+ N+
Sbjct: 859 ELS-ENLIKNI 868
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + +G I ER +++ L A I+RR L+
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPELCRRLQEAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|323497974|ref|ZP_08102983.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
gi|323317019|gb|EGA70021.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
Length = 873
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++H + V+ L N + A + +S GY++D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D +G+ I + + IK T ++T N ++++ + +P SK+
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFTVKTKIDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A DL + +A+I T RA L + ++ G E +++
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLGIHLHAAKITTIGERAEDLFIITSENGGKLTETEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ + L+ NV
Sbjct: 859 QLR-ELLVTNV 868
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V+++N + + TV++V ++R G+L ++ + + LNL I A+IS+ G ++DVFYVTD+
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 77 NGQKIGD 83
GQKI +
Sbjct: 903 TGQKIAN 909
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR GLL D+TR + L I A IST G KV D F+VTD +G KI +
Sbjct: 856 LEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQ----KIANIG 911
Query: 388 QHQIGRTILQ--VKGNLNTPPKLP 409
+ +I R L V+G + P P
Sbjct: 912 RQEIIRERLSAAVEGQVELDPAAP 935
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
S +YT +E++G DRPGLL +++ + L+ ++ SA I T + + +V D
Sbjct: 850 SDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD 901
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + +G I ER +++ L A I+RR L+
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPELCRRLQEAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 47/67 (70%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V+++N + + TV+++ ++R G+L ++ + + LNL I A+IS+ G ++DVFYVTD+
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 77 NGQKIGD 83
GQKI +
Sbjct: 902 TGQKIAN 908
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 300 PISSEAERQRVMACLEAAIERRASEGLE-----LELYTDDRFGLLSDITRILREYGLCIR 354
P+S + + M + A E + L LE+ DR GLL D+TR + L I
Sbjct: 822 PVSKKTGVKGRMKAFKVASEVLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIG 881
Query: 355 RAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL--QVKGNLNTPPKLP 409
A IST G KV D F+VTD +G KI + + +I R L V+G++ P P
Sbjct: 882 SAHISTFGEKVVDVFYVTDLTGQ----KIANIGRQEIIRERLADAVEGHVELDPAAP 934
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 38 HGILLEVIQ---FLVDLNLVITKAYISSDGGYLMDVFYVT-----DINGQKIGDQATISY 89
H LL +I + N+V + ++DG Y +D ++ D + ++ G++ T +
Sbjct: 751 HPRLLSIIAGACYATGANIVDAQIDTTTDG-YALDTIFIGRELPDDEDEKRRGERIT-AL 808
Query: 90 IKTTVETNASFLNSMRSSVGV-----------------VPSKEYTSIELTGTDRPGLLSE 132
I+TT+ + GV S +YT +E++G DRPGLL +
Sbjct: 809 IETTLRGEERLPEPVSKKTGVKGRMKAFKVASEVLVNNALSDDYTVLEISGLDRPGLLYD 868
Query: 133 VSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG 192
++ + L+ ++ SA I T + + +V D +G I + R I++ L + + +
Sbjct: 869 LTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL-TGQKIANIGRQEIIRERLADAVEGHV 927
Query: 193 DL 194
+L
Sbjct: 928 EL 929
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + +G I ER +++ L A I+RR L+
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPELCRRLQEAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ++N TV++V ++R G+L + Q L LNL I A+I++ G +DVFYVT
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI A S I+
Sbjct: 900 DLMGAKIIGAARHSAIR 916
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 93 TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
TVE + NS S +T +E++G DRPGLL ++ L+ L+ ++ SA I T
Sbjct: 837 TVEPEVTLNNSW--------SNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATF 888
Query: 153 NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
RA + +V D G I R I++ L VL
Sbjct: 889 GERAVDVFYVTDL-MGAKIIGAARHSAIRRALLQVL 923
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQ-IG 392
DR GLL +T+ L L I A I+T G + D F+VTD G KI+ + +H I
Sbjct: 861 DRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTDLMG----AKIIGAARHSAIR 916
Query: 393 RTILQV 398
R +LQV
Sbjct: 917 RALLQV 922
>gi|260772220|ref|ZP_05881136.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
gi|260611359|gb|EEX36562.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
Length = 881
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D NGQ I + + IK T ++T N ++R+ V +P SK+
Sbjct: 739 LDHNGQAIEENRHHALIKHLTHVLTDGRPTRLKTRRIPRNLQHFTVRTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +EL D PGLL+ + A +L+ + A+I T RA L + +Q G + DQ++
Sbjct: 799 TLMELVALDTPGLLATIGATFAELNLDLHGAKITTLGERAEDLFILTNQ-QGAKLTDQEQ 857
>gi|387814878|ref|YP_005430365.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339895|emb|CCG95942.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 881
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL T DR GLL+ I ++L E+ + + A+I+T+G +V+D FF+TD G+P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGDPLRDPGVCQA 868
Query: 387 IQHQIGRTILQVK 399
+Q + + + +++
Sbjct: 869 LQQDLCKMLDEIQ 881
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV+++ + +R G+L + Q L++ + +T A I++ G + DVF++
Sbjct: 793 PTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFI 852
Query: 74 TDINGQKIGD 83
TD G + D
Sbjct: 853 TDEQGDPLRD 862
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEA 287
+ +P V I + SD + T + I KD+P L L + + ++T A
Sbjct: 688 SDKPLVLIGETSDLAFEGATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNA 747
Query: 288 YQEYYIKHVDGFPISSEAERQRVMACLEAA----------IERRASEGLE---------- 327
Y + +G I+ +++ + LE A I+RR S L+
Sbjct: 748 LDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPTAFI 807
Query: 328 ----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
LE+ DR GLL+ + ++ +Y L + A+I T ++ D F++TDA+G+
Sbjct: 808 SNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITDANGD 867
Query: 378 PV-DPKIVDSIQHQI 391
P+ DP+ +Q +
Sbjct: 868 PISDPEFCMELQQAV 882
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 51 LNLVITKA-YISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVE----TNASFLNSMR 105
L+L I A I+S +D + V D NG I D + I++T+E SF N ++
Sbjct: 730 LHLNIQDARIITSANNNALDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQ 789
Query: 106 ---------------SSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
+ + P + T +E+ DRPGLL+ + + D + S+ +A+I
Sbjct: 790 RRTSRQLKQFEFEPTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIM 849
Query: 151 THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRT 196
T R + ++ D ++G I D + +++++ + N L +L+
Sbjct: 850 TEVERIDDIFYITD-ANGDPISDPEFCMELQQAVVNALSDQLELQA 894
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P I ND T+++V + +R G+L + + +D NL + A I ++ + D+FY+T
Sbjct: 803 PTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT 862
Query: 75 DINGQKIGD--------QATISYIKTTVETNASF 100
D NG I D QA ++ + +E AS
Sbjct: 863 DANGDPISDPEFCMELQQAVVNALSDQLELQASL 896
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
+ PPRV I D + ATV++V + +R G+L + Q + L + KA + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 72 YVTDINGQKIGDQATISYIKTTV 94
YV D G+ + + A +S ++ V
Sbjct: 753 YVVDAQGRPLREPAALSALREKV 775
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR GLL I + + GL + +A + T+G + D F+V DA G P+ +P + +
Sbjct: 711 VEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVFYVVDAQGRPLREPAALSA 770
Query: 387 IQHQI 391
++ ++
Sbjct: 771 LREKV 775
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP V IDN + TV++V ++R G+L E+ L+L IT A++++ G +DVFYV
Sbjct: 827 PPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 TDINGQKI 81
TD+ G ++
Sbjct: 887 TDLTGTRV 894
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S T +E+TG DRPGLL E++ LS ++ SA + T RA + +V D +G +
Sbjct: 837 SSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTDL-TGTRVT 895
Query: 173 DQKRLLKIKKLLCNVL 188
R I+K + +V
Sbjct: 896 QPDRQAAIRKAMLDVF 911
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I R+ + + ++ A+IST+G +V+D FF++D GNP+ DP +
Sbjct: 822 LEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLSDPNLCAE 881
Query: 387 IQHQIGRTI-LQVKGNL 402
+Q +I + + L+V+ +L
Sbjct: 882 LQKEICKQLDLRVEKDL 898
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 24/193 (12%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD 83
E AT I V + + V L NL I A + S+ GY D FYV D N Q IGD
Sbjct: 707 EGATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDDNFQPIGD 766
Query: 84 Q-ATISYIKTTVETNASFLNSMRSSVG----------VVPSKEYTS---------IELTG 123
A I+ +V ++ R V VP++ Y S +E+
Sbjct: 767 DPARSEKIRESVLEELRLVSGYRDVVSRRTPRQLKQFAVPTRTYISNDIVSGHTVLEVIS 826
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRPGLL+ + V D+ + +A+I T R + + D G + D +++K
Sbjct: 827 PDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISD-IEGNPLSDPNLCAELQKE 885
Query: 184 LCNV--LRTNGDL 194
+C LR DL
Sbjct: 886 ICKQLDLRVEKDL 898
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R I ND+ TV++V S +R G+L + + +D+++ + A IS+ G + D+F++
Sbjct: 806 PTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFI 865
Query: 74 TDINGQKIGD 83
+DI G + D
Sbjct: 866 SDIEGNPLSD 875
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITAQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+++ ++R G+L EV L DL+L I A I++ G ++D FYV
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 75 DINGQKIGDQ 84
D+ GQKI ++
Sbjct: 886 DLVGQKITNE 895
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL+++T +L + L I A I+T G KV DTF+V D G +
Sbjct: 841 IEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVIDLVGQKI 892
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 206 VLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTV 265
VL G++RL +++ A R R + +PHVTI + +T + I DR LL +
Sbjct: 798 VLAGKKRLPEVI-ATRTKGRKRNKTFTVKPHVTISNSLSNKFTVIEIECLDRIGLLAEVT 856
Query: 266 CCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
L D+ ++ + T + +Y+ + G I++E + + L+A + + E
Sbjct: 857 AVLADLSLDIHSARITTFGEKVIDTFYVIDLVGQKITNENRQGSISVRLKAVMSEQPDE 915
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 93 TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
TV+ + + NS+ S ++T IE+ DR GLL+EV+AVL DLS + SA I T
Sbjct: 823 TVKPHVTISNSL--------SNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTF 874
Query: 153 NARAAALLHVKD 164
+ +V D
Sbjct: 875 GEKVIDTFYVID 886
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 232 NSRPHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-A 287
+S P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 686 DSGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFT 745
Query: 288 YQEYYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE--------- 327
Y + DG I + +R +++ L A I RR L+
Sbjct: 746 LDTYIVLDNDGGSIGNNPQRVKQIRDGLSDALRNPDDYPSIIHRRVPRQLKHFAFPPQVT 805
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LEL DR GLL+ I +I ++ L ++ A+I+T+G +V+D FF+TDA
Sbjct: 806 ILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADN 865
Query: 377 NPV-DPKIVDSIQHQI 391
P+ DP++ +Q I
Sbjct: 866 QPLSDPQLCSRLQDAI 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T++++ + +R G+L + + +D +L + A I++ G + DVF++
Sbjct: 801 PPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + D S ++ +
Sbjct: 861 TDADNQPLSDPQLCSRLQDAI 881
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PR+ IDN + + T Q+ S +R G+L++++Q D N+ + A IS+ G + D+F +T
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DINGQKIGD 83
D+ +KI D
Sbjct: 827 DLKNKKIKD 835
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 237 VTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-GRMEAYQEYYIKH 295
+ L+ ++++Y AV + +R +L D V Q + +++ + +++
Sbjct: 663 IKFLNYNNKEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTS 722
Query: 296 VDGFPISSEAERQRVMACLEAAIERRASEGLE---------------------------L 328
I + E++RV+ + +++ + E +
Sbjct: 723 SIQKAIVEKNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTF 782
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSI 387
++ + DR GLL DI +I + + ++ A+IST G KV D F +TD + D KI+ ++
Sbjct: 783 QILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKIKDTKILKTL 842
Query: 388 QHQIGRTI 395
+ Q+ + +
Sbjct: 843 EDQLLKIL 850
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID D AT++Q+ +R G LL+ ++ L DL L ++K +++D F++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 128
Query: 75 DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT----- 122
G+K+ D + I+ T+ N +S +M G+ P + I++
Sbjct: 129 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 187
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ ++ D + V SAEI T A HV
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHV 240
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 12 MNPPRVVIDNDVCEHATV---------IQVDSVNRHGILLEVIQFLVDLNLVITKAYISS 62
+ PP +D D+ H V + +++ +R G+LLE+I+ + D N+ + A I +
Sbjct: 170 IKPPVKKVDIDIATHIVVEDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDT 229
Query: 63 DGGYLMDVFYVT 74
+G D F+V+
Sbjct: 230 EGLVAKDKFHVS 241
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + G+ +R A +ST+G D F+VTDASG P+ P +
Sbjct: 814 IEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYVTDASGAPLQPMRAAEV 873
Query: 388 QHQIGRTI 395
++ RT+
Sbjct: 874 AKEVERTL 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + + ATVI+V + + G+L + + L D + + A++S+ G +D FYV
Sbjct: 798 PPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYV 857
Query: 74 TDINGQKI 81
TD +G +
Sbjct: 858 TDASGAPL 865
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 964 DLLGAQINAPTRQSAIKSAL 983
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 913 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 971
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 972 APTRQSAIKSALTHVM 987
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 797 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 856
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + + R
Sbjct: 857 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRSKAR-------- 898
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 899 ---------PFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 949
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 950 ATFGERARDVFYVTDLLGAQINAPTRQSAIKSAL 983
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 5 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 64
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 65 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 124
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+
Sbjct: 125 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 184
Query: 380 -DPKIVDSIQHQI 391
DP + +Q I
Sbjct: 185 SDPLLCSRLQDAI 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 97 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 156
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 157 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 197
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF--PISSEA 305
T V + + +R L D C +D+ V + T + +I D P+++
Sbjct: 696 TQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRSIDIFIIQHDATCQPVTASD 755
Query: 306 ERQRVMACLEAA-----IER-------RASEGLEL-----------------ELYTDDRF 336
+++R++ LE A +E RA + L EL DR
Sbjct: 756 DQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSIRPDLEGKRTLIELVAPDRA 815
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIGRTI 395
GLL+ + R+ E+GL + A+I+T+G +V+D F+VTD+ GN + D + ++ ++ +
Sbjct: 816 GLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGNNLYDDDFIHRLKERLEHEL 875
Query: 396 LQVKGNLN 403
+ G L+
Sbjct: 876 NALSGALS 883
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V I D+ T+I++ + +R G+L V + + L ++ A I++ G + DVFYV
Sbjct: 791 PANVSIRPDLEGKRTLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYV 850
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRS 106
TD G + D I +K +E + L+ S
Sbjct: 851 TDSRGNNLYDDDFIHRLKERLEHELNALSGALS 883
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I + ++ L +R A+I+T+G +V+D F+VTDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTDAHNQPLSDPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQANGQETVPVRI 898
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFYVTD + Q + D
Sbjct: 841 SVRNAKIATLGERVEDVFYVTDAHNQPLSD 870
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 38/177 (21%)
Query: 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG-RMEAYQEYYIKHVDGFPISSEAE 306
T V I KDRP L V + + + ++ ++T A+ + + +DG + + +
Sbjct: 699 TEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTELDGSLL--KFD 756
Query: 307 RQRVMACLEAAI----------ERRASEG----------------------LELELYTDD 334
R+RV LE AI + + SE E+EL+T D
Sbjct: 757 RRRV---LEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEMELFTLD 813
Query: 335 RFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQI 391
+ GLL+D++ + E L I+ A+I+T+G K +D F +T+A G + + S+ ++
Sbjct: 814 KAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALSERERQSLSEKL 870
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 34/185 (18%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTD 75
V I N T + + +R + L+V+ + + L I A I +S GY D F VT+
Sbjct: 688 VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747
Query: 76 ING-------QKIGDQATISYIKT-----------------TVETNASFLNSMRSSVGVV 111
++G +++ ++A I+ + + V+T FLN+ +++
Sbjct: 748 LDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTT---- 803
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
+T +EL D+ GLL++VS V ++L+ S+ +A+I T +A + + G A+
Sbjct: 804 ----HTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFF-ILTNAKGEAL 858
Query: 172 EDQKR 176
+++R
Sbjct: 859 SERER 863
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 816 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSR 875
Query: 387 IQHQI 391
+Q I
Sbjct: 876 LQDAI 880
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND T++++ + +R G+L + + ++ +L
Sbjct: 780 DDYPTIIQRRVPRQLKHFTFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 839
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + + D S ++ +
Sbjct: 840 SLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSRLQDAI 880
>gi|120555461|ref|YP_959812.1| PII uridylyl-transferase [Marinobacter aquaeolei VT8]
gi|120325310|gb|ABM19625.1| metal dependent phosphohydrolase [Marinobacter aquaeolei VT8]
Length = 881
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL T DR GLL+ I ++L E+ + + A+I+T+G +V+D FF+TD G P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGEPLRDPGVCQA 868
Query: 387 IQHQIGRTILQVK 399
+Q + + + +++
Sbjct: 869 LQQDLCKMLDEIQ 881
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV+++ + +R G+L + Q L++ + +T A I++ G + DVF++
Sbjct: 793 PTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFI 852
Query: 74 TDINGQKIGD 83
TD G+ + D
Sbjct: 853 TDEQGEPLRD 862
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RVVI ND+ T + + +++R G+L + + + L++ A I++ G DVF++
Sbjct: 796 PTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFI 855
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD+NG+ + D A ++ T+
Sbjct: 856 TDLNGEPVSDPALCQQLQQTL 876
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++ T DR GLL+ I RI + L ++ A I+T+G K +D FF+TD +G PV DP +
Sbjct: 812 VDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITDLNGEPVSDPALCQQ 871
Query: 387 IQHQI 391
+Q +
Sbjct: 872 LQQTL 876
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I + R Q + L A I+RR L+
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ DR GLL+ I +I ++ L ++ A+I+T+G +V+D FFVTDA P+
Sbjct: 809 DALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHNQPL 868
Query: 380 -DPKIVDSIQHQIGRTI 395
DP++ +Q I +
Sbjct: 869 SDPELCARLQLAIAEQL 885
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I ND T++++ + +R G+L + + +D +L + A I++ G + DVF+VT
Sbjct: 802 PQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVT 861
Query: 75 DINGQKIGD 83
D + Q + D
Sbjct: 862 DAHNQPLSD 870
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 30/167 (17%)
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEA-YQEYYIKHVDG 298
LD + T + + ++D+P+LL L + ++ + TG A +Y+ + DG
Sbjct: 247 LDSPVANTTQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGATLNTFYVLNSDG 306
Query: 299 FPISS-EAERQRVMACLEAAIE--------RRASEGLE--------------------LE 329
PI+S EA + + +E + RR L+ LE
Sbjct: 307 SPIASDEANLDYIRSSIETGLASNKSRSSTRRTPRQLKSFVMPTETHIRQDLDRGWTILE 366
Query: 330 LYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+ T DR GLL+ + + ++G+ ++ A+I T+G +V+D FFVTD G
Sbjct: 367 VATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQG 413
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 21/136 (15%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIG-DQATISYIKTTVETNASFLNSMRS 106
L+ L++ + Y +DG L + FYV + +G I D+A + YI++++ET + N RS
Sbjct: 277 LLHLSIHDARIYTGTDGATL-NTFYVLNSDGSPIASDEANLDYIRSSIETGLAS-NKSRS 334
Query: 107 SVGVVP------------------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
S P + +T +E+ DRPGLL+ + A+ D ++ SA+
Sbjct: 335 STRRTPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAK 394
Query: 149 IWTHNARAAALLHVKD 164
I T R + V D
Sbjct: 395 IQTLGERVEDVFFVTD 410
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P I D+ T+++V + +R G+L + +D + + A I + G + DVF+V
Sbjct: 349 PTETHIRQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFV 408
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD+ G+ + + T+ +++T +
Sbjct: 409 TDMQGRALTNNTTLEHLQTAI 429
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 91 KTTVETNA-SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
K TV + A F+ ++ S YT IE++G DRPGLL E++ ++ L+ ++ SA +
Sbjct: 822 KRTVRSKARPFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 150 WTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
T RA + +V D G I R IK L +V+
Sbjct: 882 ATFGERARDVFYVTDL-LGAQINAPTRQSAIKSALTHVM 919
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + + R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVAKRTVRSKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 831 ---------PFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 882 ATFGERARDVFYVTDLLGAQINAPTRQSAIKSAL 915
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRVV+DN+ + +V++V +V+R +L + Q L D + I KAYI+++ L+DVFYV
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 75 DINGQK-IGD 83
D G+K +GD
Sbjct: 828 DSRGEKLLGD 837
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ++N TV++V ++R G+L + L LNL I A++++ G +DVFYVT
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI A S I+
Sbjct: 930 DLMGAKITGAARQSTIR 946
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T +E++G DRPGLL ++ L+ L+ ++ SA + T RA + +V D G I
Sbjct: 879 SNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTDL-MGAKIT 937
Query: 173 DQKRLLKIKKLLCNVL 188
R I++ L V
Sbjct: 938 GAARQSTIRRALVAVF 953
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 32/144 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIGDQ------------------ATISYIKT------TVE 95
++SD GY+ D F +T++NG+ + + ++S+ TV+
Sbjct: 719 LTSDDGYVFDSFIITELNGELVRSERRRELEAVLTSVLLGEKLPSVSFANNRQLQHFTVK 778
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +E+ D+PGLL+++S + T+L ++ +A+I T +
Sbjct: 779 TDVRFLKETK--------KEHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEK 830
Query: 156 AAALLHVKDQSSGCAIEDQKRLLK 179
A + ++ E+++ LL+
Sbjct: 831 AEDFFILTNEKGTALTEEERGLLE 854
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
E ELE+ D+ GLL+ I++I E L I A+I+T+G K +D F +T+ G +
Sbjct: 790 EHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKGTAL 845
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 318 IERRASEGLEL-ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+ RAS+ L E++ D+R GLL DITR L E GL IR A+I+T +V D F+V D G
Sbjct: 797 VNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDLEG 856
Query: 377 NPVD-----PKIVDSIQHQIG 392
V+ +IV+++ ++G
Sbjct: 857 QKVEDEKETARIVETLNKKLG 877
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
+ P+++++N + T+I+V + NR G+L ++ + L +L L I A I++ + DVFY
Sbjct: 791 HAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFY 850
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V D+ GQK+ D+ + I T+
Sbjct: 851 VRDLEGQKVEDEKETARIVETL 872
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 903
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 904 APTRQSAIKSALTHVM 919
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + + R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRSKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 831 ---------PFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 882 ATFGERARDVFYVTDLLGAQINAPTRQSAIKSAL 915
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ V+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 903
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L +V+ + + P+
Sbjct: 904 APTRQSAIKSALTHVMAGDKAVAAPA 929
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + + R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRNKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 831 ---------PFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 882 ATFGERARDVFYVTDLLGAQINAPTRQSAIKSAL 915
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 896 DLLGAQINAPTRQSAIKSAL 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 903
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 904 APTRQSAIKSALTHVM 919
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + + R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRSKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 831 ---------PFVIEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 882 ATFGERARDVFYVTDLLGAQINAPTRQSAIKSAL 915
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 265 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 324
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 325 SDPELCLRLQEAI 337
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
DE+ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 237 DEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 296
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 297 SLQNAKIATLGERVEDVFFITDADNQPLSD 326
>gi|15010738|gb|AAK74028.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
gi|23308377|gb|AAN18158.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
Length = 411
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 159/379 (41%), Gaps = 44/379 (11%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT-DINGQKI-GDQA 85
TV+ V+ + G+ + + +++ L IT+A S+DG + VF+VT DI+ KI D
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSL 80
Query: 86 TISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
+ SF ++S+V PS ++ DR GLL +V+ VLT+L ++
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPS--LYLLKFFCRDRKGLLHDVTKVLTELEFTIQ 138
Query: 146 SAEIW-THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG-----DLRTPSM 199
++ T + R + + D + ++R K L VL +G +L P
Sbjct: 139 RVKVMTTPDGRVLDMFFITDAMD--LLHTKQRQTKTCDHLTAVLGEHGVSCELELAGPE- 195
Query: 200 SISSARVLHGERRLHQM--LFADRDF--ERLDCVNYNSRPHVTILDCS-DRDYTAVTIRS 254
L +R + L AD F + D +S V +D +T + IR
Sbjct: 196 -------LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRC 248
Query: 255 KDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ--EYYIKHVDGFPISSE-------A 305
D+ L +D + D + +G + +++ Y+ E +++ D I A
Sbjct: 249 VDQKGLFYDILRTSKDCDVHIAYGR-FSSKVKGYRNLELFVRGTDENKIMDPKHQANFCA 307
Query: 306 ERQRVMAC-LEAAIERRASE-----GLELELYTDDRFGLLSDITRILREYGLCIRRAEI- 358
+ M C L I R + +EL R + D+T L+ G+CI AEI
Sbjct: 308 RLKEEMVCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEIG 367
Query: 359 --STMGRKVKDTFFVTDAS 375
ST+ R+ + F+ D S
Sbjct: 368 RHSTLDRQWEVYRFLLDES 386
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP------VDPKIVDSI 387
D GL S + RI+ E+GL I RA+ ST GR F+VT +P + +++ +
Sbjct: 29 DESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDSLKNRLLSAC 88
Query: 388 QHQIGRTILQVKGNLNTPPKL 408
+G ++ N++ PP L
Sbjct: 89 PSCLGSFYFCLQSNVSKPPSL 109
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + Q L L + A++S+ G +D FYV
Sbjct: 764 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 823
Query: 74 TDINGQKIGDQATISYIKTTVET 96
TD G+ +G++ K E
Sbjct: 824 TDAGGRPLGEEEAARVAKGVEEA 846
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I + L GL +R A +ST+G D F+VTDA G P+
Sbjct: 780 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 831
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ T DR GLL+ I +I +Y + + A+I+T+G V D FF+TD + P+ DP + +S
Sbjct: 822 LEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQPINDPALCES 881
Query: 387 IQHQIGRTI 395
IQ+ I + +
Sbjct: 882 IQNAICKEL 890
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG-GYLMDVFYVTDINGQKIG- 82
E AT I + + + + L LNL I A I S G G+ +D F+V D NG+ IG
Sbjct: 707 EGATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGN 766
Query: 83 DQATISYIKTT-----VETNAS--------------FLNSMRSSVGVVPSKEYTSIELTG 123
D I I++ + T++S F R+++ + ++ +E+
Sbjct: 767 DPERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHSVLEVLT 826
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT 151
DRPGLL+ + + D +++A+I T
Sbjct: 827 PDRPGLLARIGKIFLDYDIKLLNAKIAT 854
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R + DV +V++V + +R G+L + + +D ++ + A I++ G + DVF++
Sbjct: 806 PTRTTLFTDVAGGHSVLEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFI 865
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD N Q I D A I+ +
Sbjct: 866 TDNNHQPINDPALCESIQNAI 886
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 330 LYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVK-DTFFVTDASGNPV--DPKIVDS 386
++T + L + L + L I+ A I + G DTFFV D++G P+ DP+ +D
Sbjct: 714 IHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGNDPERIDE 773
Query: 387 IQHQIGRTILQVKGNLN-----TPP--KLPQEPARSFFFTNFFKGRS 426
IQ + ++ +L+ TP +L P R+ FT+ G S
Sbjct: 774 IQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHS 820
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ V+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V IDND + TVI+V+ ++R G++ + + L L L I A+I++ G +DVFYV
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVK 885
Query: 75 DINGQKI 81
D+ G K+
Sbjct: 886 DVIGHKV 892
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P+++ T + L D PGL + + L ++V A+I+T + A +L V+D G A
Sbjct: 723 PTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQD-PEGLA 781
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
I +Q+R++++++++ VL +G++ P +I S
Sbjct: 782 ISEQRRIIRLEEMIRKVL--SGEISAPD-AIESRTRRE-----------------RRAEA 821
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
++ P V I + + DYT + + DRP L+ L + + + T A
Sbjct: 822 FSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDV 881
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGL 326
+Y+K V G +++ +++ A+ER E L
Sbjct: 882 FYVKDVIGHKVTNANKKK--------AVERHLLEAL 909
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 49 VDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATI----SYIKTTVETNASFLNSM 104
+ +N+V K + + DG +D+ +V D G I +Q I I+ + S +++
Sbjct: 751 LGMNIVDAKIFTTRDG-MALDMLWVQDPEGLAISEQRRIIRLEEMIRKVLSGEISAPDAI 809
Query: 105 RSS---------VGVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
S V P S +YT IE+ G DRPGL+ +S L L ++ SA
Sbjct: 810 ESRTRRERRAEAFSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSA 869
Query: 148 EIWTHNARAAALLHVKD 164
I T+ RA + +VKD
Sbjct: 870 HITTYGERAVDVFYVKD 886
>gi|424039494|ref|ZP_17777859.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
gi|408892923|gb|EKM30271.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
Length = 874
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVG 109
GY++D F V D +G+ I G ++ IKT N ++++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +E D PGLL++V DL ++ +A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+Q+ L+ +KL+ N+
Sbjct: 850 GRLSEEQQAELR-EKLIENL 868
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
+VVIDN E+ +VI+V + + G L + Q + D L I KAYI+++ L+DVFYV
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 74 TDINGQKIGDQ 84
D GQK+ D+
Sbjct: 742 LDSRGQKLVDE 752
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ ++SE +E+Y D G L IT+ + ++GL I +A I+T ++ D F+V D+ G
Sbjct: 687 IDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLDSRG 746
Query: 377 NP-VDP----KIVDSIQHQIGR 393
VD ++ I H I R
Sbjct: 747 QKLVDEDFRQEVTQGILHSIDR 768
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L ++ P+
Sbjct: 905 APTRQAAIKSALLHLLASDDSAAQPA 930
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 329 ELYTD------DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
ELYT DR GLL ++T + + L I A ++T G + +D F+VTD G ++
Sbjct: 847 ELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I + R +R+ L A I+RR L+
Sbjct: 749 YIVLDNDGETIGNNPARVERIRKGLTEALRNPDDYPNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FFVTD + P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDENNQPL 868
Query: 380 -DPKIVDSIQHQIGRTILQVKGNLNTPPKL 408
DP++ +Q I + K + P +L
Sbjct: 869 SDPQLCMRLQEAIVEQLTVDKDSTPEPWRL 898
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND TV+++ + +R G+L + ++ +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
TD N Q + D
Sbjct: 861 TDENNQPLSD 870
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + Q L L + A++S+ G +D FYV
Sbjct: 765 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 824
Query: 74 TDINGQKIGDQATISYIKTTVET 96
TD G+ +G++ K E
Sbjct: 825 TDAGGRPLGEEEAARVAKGVEEA 847
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I + L GL +R A +ST+G D F+VTDA G P+
Sbjct: 781 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 832
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPELCRRLQDAI 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++ T DR GLL+ I RI + + ++ A I+T+G + +D FF+TD G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 387 IQHQIGRTILQVKGNLNT 404
+Q + + L K N NT
Sbjct: 874 LQQTLKQE-LDAKNNGNT 890
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +VVI ND+ T + + +++R G+L + + + +++ A I++ G DVF++
Sbjct: 798 PTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFI 857
Query: 74 TDINGQKIGDQATISYIKTTVE 95
TD++G+ + D ++ T++
Sbjct: 858 TDLDGEPVSDPTLCQELQQTLK 879
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 51 LNLVITKA-YISSDGGYLMDVFYVTDINGQKIG-DQATISYIKTTVETNASFLNSMRSSV 108
L L I A I+S G+ +D + V D G IG D A I I+ T+ + + S+V
Sbjct: 725 LGLTIMDARIITSVDGFSLDTYIVLDEQGTPIGEDWARIEQIRKTLTETLKYPDRYASTV 784
Query: 109 GV----------VPSK---------EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
VP++ + T++++ DRPGLL+ + + V +A I
Sbjct: 785 SRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARI 844
Query: 150 WTHNARAAALLHVKD 164
T RA + + D
Sbjct: 845 ATLGERAEDVFFITD 859
>gi|187608845|sp|P83643.2|UP12_ORYSI RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
gi|187663980|sp|Q0J709.2|UP12_ORYSJ RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
Length = 283
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D +T
Sbjct: 77 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 136
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+KIG+ + ++ T+ N AS ++ ++ G P E +++
Sbjct: 137 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 196
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++ D++ +V S E T A A HV +
Sbjct: 197 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVSYRG-- 254
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 255 ------KPLIKALQQVLANSLR 270
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V++D+ E ATV++V +R G+L + + D L I A+++S G +D FYV
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 75 DINGQKIGDQATISYIKTTVET 96
D G+KI + ++ ++ +E
Sbjct: 82 DRKGRKITSEQRVAELRAALEA 103
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ T +E++G DRPGLL+ +S V +D ++ SA + ++ RA +V D+ G I
Sbjct: 31 SETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDR-KGRKIT 89
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS---MSISSARV 206
++R+ +++ L VL D R P+ ++SAR
Sbjct: 90 SEQRVAELRAALEAVL----DSRAPAPEGRKVASARA 122
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL+ ++R+ + GL IR A +++ G + D+F+V D G +
Sbjct: 37 VEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRKGRKI 88
>gi|222640166|gb|EEE68298.1| hypothetical protein OsJ_26556 [Oryza sativa Japonica Group]
Length = 280
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D +T
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+KIG+ + ++ T+ N AS ++ ++ G P E +++
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++ D++ +V S E T A A HV +
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVSYRG-- 251
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 252 ------KPLIKALQQVLANSLR 267
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
R+ P P+V+++N + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 67 LMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 889 ARDVFYVTDLLGARI 903
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T IE++G DRPGLL +++A ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDL-LGARIT 904
Query: 173 DQKRLLKIKKLLCNVLRTNG 192
R IK+ L ++L G
Sbjct: 905 APTRQAAIKRALIHLLANGG 924
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQS 166
+VG ++ T + + D P LLS ++ ++V A+I+T AL +
Sbjct: 729 NVGFDEARGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYT-TTDGQALDTIAISR 787
Query: 167 SGCAIEDQ-KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
ED+ +R +I +++ V+ +G LR P + AR G+ RL +
Sbjct: 788 EYDRDEDEGRRAARIGEIIEQVI--DGRLRLPDV---VARRAAGKTRLRPFVV------- 835
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
P V + + +T + + DRP LLF ++ + + V T
Sbjct: 836 --------EPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGE 887
Query: 286 EAYQEYYIKHVDGFPISS 303
A +Y+ + G I++
Sbjct: 888 RARDVFYVTDLLGARITA 905
>gi|342904961|ref|ZP_08726756.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
gi|341952197|gb|EGT78733.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
Length = 863
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPVLSITPNRQIQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +Q G A++ Q+R ++L NVL N
Sbjct: 832 VEDFFILANQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G KV+D F + + G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFFILANQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSRLQDAI 881
>gi|254785172|ref|YP_003072600.1| PII uridylyl-transferase [Teredinibacter turnerae T7901]
gi|237686077|gb|ACR13341.1| protein-P-II uridylyltransferase [Teredinibacter turnerae T7901]
Length = 905
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I ++ E+ + ++ A+IST+G +V+D FF+TDA P+ DP++ +
Sbjct: 827 LEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFITDADNQPLGDPRLCRA 886
Query: 387 IQHQI 391
+Q I
Sbjct: 887 LQDDI 891
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R I ND+ TV++V S +R G+L + Q ++ ++ + A IS+ G + DVF++
Sbjct: 811 PTRTSISNDIVSGNTVLEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFI 870
Query: 74 TDINGQKIGD 83
TD + Q +GD
Sbjct: 871 TDADNQPLGD 880
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 23/162 (14%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD 83
E AT I + + + + V L L L I A + S++ GY +D FYV + N Q +GD
Sbjct: 712 EGATQIFIRTRDERHVFPAVASVLTSLQLNIQDARLYSTNDGYTVDTFYVLNDNDQPLGD 771
Query: 84 QATISYIKT---------------------TVETNASFLNSMRSSVGVVPSKEYTSIELT 122
++ Y+K T F R+S+ T +E+
Sbjct: 772 NSS-KYLKISRAIGEELLLLGDYNEVVRRRTPRVLKQFSVPTRTSISNDIVSGNTVLEVI 830
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + V + + +A+I T R + + D
Sbjct: 831 SPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFITD 872
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSRLQDAI 881
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQEAI 881
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPS 113
+ A I++ G + DVF++TD + Q + D ++ + S+ GV PS
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQEAIVQQL----SVNQESGVEPS 896
Query: 114 K 114
+
Sbjct: 897 R 897
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+
Sbjct: 809 DAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP + +Q I
Sbjct: 869 SDPLLCSRLQDAI 881
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|218200735|gb|EEC83162.1| hypothetical protein OsI_28383 [Oryza sativa Indica Group]
Length = 280
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D +T
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
++ G+KIG+ + ++ T+ N AS ++ ++ G P E +++
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ ++ D++ +V S E T A A HV +
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVSYRG-- 251
Query: 169 CAIEDQKRLLK-IKKLLCNVLR 189
K L+K ++++L N LR
Sbjct: 252 ------KPLIKALQQVLANSLR 267
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+L+ ++ L+ + +VV A +T + A A+ V+D+ G E
Sbjct: 733 DHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDRE-GSPYEKA--------- 782
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPH-----VT 238
R P ++ + L GE + A E+ D + RP +T
Sbjct: 783 -----------RLPRLTTMIRKTLMGE------VVASEAMEKRDKIKKRERPFNVPTTIT 825
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ YT + + ++DRP LL+D CL + T+ T ++ +Y+K G
Sbjct: 826 FDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFG 885
Query: 299 FPISSEAERQRVMACLEAAIERRA 322
+ SE R + L AI R A
Sbjct: 886 LKLHSEPRRAALERKLRDAIARVA 909
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P + DN+ E T+I+VD+ +R G+L ++ + L N+ I+ A I+
Sbjct: 809 DKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIA 868
Query: 62 SDGGYLMDVFYVTDINGQKI 81
+ G ++D FYV D G K+
Sbjct: 869 TYGVQVVDTFYVKDTFGLKL 888
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQAAI 881
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQAAI 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|399544195|ref|YP_006557503.1| [protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
gi|399159527|gb|AFP30090.1| [Protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
Length = 881
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ T DR GLL+ I ++L E+ + + A+I+T+G +V+D FFVTD +GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHKVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 387 IQHQIGRTILQVK 399
+Q + +T+ ++
Sbjct: 869 LQDDLCKTLDNIR 881
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V++ ND TV++V + +R G+L + Q L++ + +T A I++ G + DVF+V
Sbjct: 793 PTEVLLSNDSFNLRTVLEVITPDRPGLLARIGQVLLEHKVRLTTAKIATLGERVEDVFFV 852
Query: 74 TDINGQKIGDQA 85
TD NG + D A
Sbjct: 853 TDENGNALCDPA 864
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L ++ P+
Sbjct: 905 APTRQAAIKSALLHLLASDDTAAQPA 930
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P V+I + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 329 ELYTD------DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
ELYT DR GLL ++T + + L I A ++T G + +D F+VTD G ++
Sbjct: 847 ELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP + +Q I
Sbjct: 869 SDPLLCSRLQDAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L + P+
Sbjct: 905 APTRQAAIKSALLHLLASEDAAAQPA 930
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P V+I + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 329 ELYTD------DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
ELYT DR GLL ++T + + L I A ++T G + +D F+VTD G ++
Sbjct: 847 ELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCLR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQEAI 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L ++ P+
Sbjct: 905 APTRQAAIKSALLHLLASDDAAAQPA 930
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P V+I + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|89075422|ref|ZP_01161839.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
gi|89048838|gb|EAR54408.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
Length = 873
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
A L + P +++ T + V S ++ + V+ L NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKIKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMR---------------SSVG 109
GY +D F V D NG+ I + + I+ T+ + + S R + V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTT-IRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVS 790
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA-ALLHVKDQS 166
+P+K + T +EL D PGLL++V AV + + S+ +A+I T RA + V DQ
Sbjct: 791 FLPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERAEDFFILVNDQG 850
Query: 167 SGCAIEDQKRL 177
++E Q+ L
Sbjct: 851 CNLSVEQQEVL 861
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T+ NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITEFNGELVEFDRRRELEQALTVSLQSEKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PG+L++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
E E+EL D+ G+L+ +++I E L + A+I+T+G K +D F +T+ G +
Sbjct: 791 EHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG-----QA 845
Query: 384 VDSIQHQIGRTIL 396
+DS Q +I R +L
Sbjct: 846 LDSQQREILRNVL 858
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G+L E+ L DL+L I A I++ G ++D FYVT
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 75 DINGQKIGDQ 84
D+ GQK+ ++
Sbjct: 887 DLVGQKVTNE 896
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL++IT +L + L I A I+T G KV DTF+VTD G V
Sbjct: 848 DRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IE+ DR GLL+E++AVL+DLS + SA I T + +V D G +
Sbjct: 836 SNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDL-VGQKVT 894
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
++ R + I L V+ D
Sbjct: 895 NENRQVNIANRLKPVMTEQPD 915
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L ++ P+
Sbjct: 905 APTRQAAIKSALLHLLASDDAAAQPA 930
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P V+I + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 501 DLLGAQINAPTRQAAIKSAL 520
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 450 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 508
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 509 APTRQAAIKSALTHVM 524
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 334 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 393
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P +
Sbjct: 394 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPEV-------------------VA 426
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
R R + P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 427 RRTVRSKAKPFVVEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 486
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 487 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 520
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+E+ DR GLL ++T + + L I A ++T G + +D F+VTD G ++
Sbjct: 456 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 508
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PR + N + +VI+++ ++R G+L EV L DL+L I A+I++ G ++D FYVT
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 75 DINGQKIGDQATISYIK 91
D+ G K+ + + I+
Sbjct: 871 DLTGSKVDNPDRLEVIR 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PKIVDS 386
+E+ DR GLLS++T +L + L I A I+T G KV DTF+VTD +G+ VD P ++
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEV 885
Query: 387 IQHQIGRTILQVKGNLNTPPK 407
I+ ++ TI N PP+
Sbjct: 886 IRRELIETI------ENGPPR 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 105 RSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
R+ V S ++ IE+ DRPGLLSEV++VL+DLS + SA I T + +V D
Sbjct: 812 RADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTD 871
Query: 165 QSSGCAIEDQKRLLKIKKLLCNVLRTNGDLR 195
+G +++ RL I++ L + NG R
Sbjct: 872 L-TGSKVDNPDRLEVIRRELIETIE-NGPPR 900
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI++ ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I S IK+ +
Sbjct: 896 DLLGAQISAPTRQSAIKSAL 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIS 903
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 904 APTRQSAIKSALTHVM 919
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + G+ R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRGKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILD-CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+ P VTI + SDR YT + + DRP LL++ ++ + +
Sbjct: 831 ---------PFVIEPEVTINNQWSDR-YTVIEMSGLDRPGLLYELTTAISKLNLNIASAH 880
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
V T A +Y+ + G IS+ + + + L
Sbjct: 881 VATFGERARDVFYVTDLLGAQISAPTRQSAIKSAL 915
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIN 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPS 198
R IK L ++L + P+
Sbjct: 905 APTRQAAIKSALLHLLASEDAAAQPA 930
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG P++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G++ H+
Sbjct: 789 YERDEDEG------RRATRIGETIEQVL--EGKLRLPDAV--ARRTTRGKQ--HKA---- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
++ P V+I + YT + + DRP LL++ ++ + + V
Sbjct: 833 ----------FSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G I++ + + + L
Sbjct: 883 ATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 329 ELYTD------DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
ELYT DR GLL ++T + + L I A ++T G + +D F+VTD G ++
Sbjct: 847 ELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPQLCLRLQAAI 881
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVG 109
GY++D F V D +G+ I G + ++ IKT N ++++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +E D PGLL++V DL ++ +A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 GCAIEDQKRLLKIK 181
G E+Q+ L+ K
Sbjct: 850 GRLSEEQQDELREK 863
>gi|424047451|ref|ZP_17785010.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
gi|408883944|gb|EKM22707.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
Length = 874
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVG 109
GY++D F V D +G+ I G + ++ IKT N ++++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +E D PGLL++V DL ++ +A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 GCAIEDQKRLLKIK 181
G E+Q+ L+ K
Sbjct: 850 GRLSEEQQDELREK 863
>gi|126666182|ref|ZP_01737162.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
gi|126629504|gb|EBA00122.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
Length = 881
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ T DR GLL+ I ++L E+ + + A+I+T+G +V+D FFVTD +GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHRVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 387 IQHQIGRTILQVK 399
+Q + +T+ ++
Sbjct: 869 LQDDLCKTLDNIR 881
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V++ ND TV++V + +R G+L + Q L++ + +T A I++ G + DVF+V
Sbjct: 793 PTEVLLSNDRFNLRTVLEVITPDRPGLLARIGQVLLEHRVRLTTAKIATLGERVEDVFFV 852
Query: 74 TDINGQKIGDQA 85
TD NG + D A
Sbjct: 853 TDENGNALCDPA 864
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ V+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIMPNRQLQHFIVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV++ + TVI+V++ +R G+L +++ L D + I A+I++ G +D FY+T
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 75 DINGQKIGDQATISYIKT 92
D+ GQK+ + ++T
Sbjct: 875 DLTGQKLDGSQRLKGLET 892
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQF--LVDLNLVITKAYISSDGGYLMDVFYVTDINGQ 79
D T ++ S + G+L+ + L N++ + + + DG L ++ + GQ
Sbjct: 711 DAGSGTTQVRTYSEDHPGLLMRLAGAISLCGANIIDARIHTTRDGMALNNIG-IQGHGGQ 769
Query: 80 KIGDQATISYIKTTVETNASFLNSMRSSVGVVP---------------------SKEYTS 118
GD + +K ++ + +R + P S +T
Sbjct: 770 PFGDAHQLDRLKRSIADVLAGKVRLREELAQRPLPQRRADAFAVQPRVLVQPNASNRFTV 829
Query: 119 IELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178
IE+ DRPGLL + L D ++ SA I T+ RA ++ D +G ++ +RL
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDL-TGQKLDGSQRLK 888
Query: 179 KIKKLLCNVLR 189
++ L N ++
Sbjct: 889 GLETRLLNAVK 899
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR-AAALLHVKDQS-SGCAIEDQ 174
T + D PGLL ++ ++ +++ A I H R AL ++ Q G D
Sbjct: 717 TQVRTYSEDHPGLLMRLAGAISLCGANIIDARI--HTTRDGMALNNIGIQGHGGQPFGDA 774
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
+L ++K+ S A VL G+ RL + L A R + + +
Sbjct: 775 HQLDRLKR-------------------SIADVLAGKVRLREEL-AQRPLPQRRADAFAVQ 814
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V + + +T + + + DRP LL+ + L D + ++ + T A +Y+
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 295 HVDG 298
+ G
Sbjct: 875 DLTG 878
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+E+ DR GLL + R L + + I A I+T G + DTF++TD +G +D
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDLTGQKLD 882
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPL 868
Query: 380 -DPKIVDSIQHQI 391
DP++ +Q I
Sbjct: 869 SDPELCLRLQAAI 881
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD + Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSD 870
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCTR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVF++TD N Q + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSD 870
>gi|254507884|ref|ZP_05120014.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
gi|219549257|gb|EED26252.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
Length = 711
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++H + V+ L N + A + +S GY++D F V
Sbjct: 517 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 576
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D +G+ + + + IK T ++T N ++++ V +P SK+
Sbjct: 577 LDQHGEVVDESRHKAVIKHLTHVLQDGRPTKIKTRRVPRNLQHFTVKTQVDFLPTKSKKR 636
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG-CAIEDQK 175
T +E D PGLL+ V A DL + +A+I T RA L + ++ G ++++
Sbjct: 637 TLMEFVALDTPGLLATVGATFADLHVHLHAAKITTIGERAEDLFIITSENGGKLTVQEEN 696
Query: 176 RLLKIKKLLCNV 187
+L ++ L+ NV
Sbjct: 697 QLREL--LVSNV 706
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV IDN+V + TV+ V +++R G+L ++ L + + I + IS+ G D FYV
Sbjct: 806 PPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYV 865
Query: 74 TDINGQKIGDQATISYIKTTV 94
DI G KI + ++ T+
Sbjct: 866 QDIFGHKIVQPEKLDELRETL 886
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 332 TDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP-VDPKIVDSIQHQ 390
T DR GLL I L++ G+ I ++IST G + DTF+V D G+ V P+ +D ++
Sbjct: 826 TMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYVQDIFGHKIVQPEKLDELRET 885
Query: 391 I 391
+
Sbjct: 886 L 886
>gi|424033774|ref|ZP_17773185.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
gi|408873887|gb|EKM13070.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
Length = 874
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVG 109
GY++D F V D +G+ I G ++ IKT N ++++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +E D PGLL++V DL ++ +A+I T RA L + ++
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+Q+ L+ ++L+ N+
Sbjct: 850 GRLSEEQQAELR-ERLIENL 868
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + I E+ L ++ A+I+T+G +V+D FF+TDA+ P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L V ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQDAI 881
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI 881
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI 881
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA+ + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND TV+++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD N Q++ D S ++ +
Sbjct: 861 TDANNQQLSDPQLCSRLQDAI 881
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I N + TVI+++ ++R G+L E+ L DL+L I A+I++ G ++D FYV
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 75 DINGQKIGDQ 84
D+ G KI ++
Sbjct: 894 DLVGMKITNE 903
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S ++T IEL DRPGLLSE+++VL+DLS + SA I T + +V+D G I
Sbjct: 843 SNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRDL-VGMKIT 901
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
++ R I L VL D
Sbjct: 902 NENRQTNIVARLKAVLAKEDD 922
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+EL DR GLLS+IT +L + L I A I+T G KV DTF+V D G
Sbjct: 849 IELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRDLVG 897
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ RP VTI + +T + + DRP LL + L+D+ + + T +
Sbjct: 830 FTVRPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDT 889
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+Y++ + G I++E + ++A L+A + + E
Sbjct: 890 FYVRDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI 881
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 11 RMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
R + V IDN+ +H TVI V + ++ G+L E+ + L DL L + A I + ++DV
Sbjct: 814 RRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 71 FYVTDINGQKIGDQATISYIKTTVE 95
FYVT+ NG+K+ + T I+ ++
Sbjct: 874 FYVTERNGRKVEEARTCESIQARLQ 898
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
++++ DD+ GLL +I + L + GL + A+I T +V D F+VT+ +G V + + +S
Sbjct: 833 IDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDVFYVTERNGRKVEEARTCES 892
Query: 387 IQHQI 391
IQ ++
Sbjct: 893 IQARL 897
>gi|145631865|ref|ZP_01787623.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|144982521|gb|EDJ90079.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
Length = 863
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N T+++V ++R G+L E+ L LNL I A++++ G ++DVFYVT
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 75 DINGQKIGDQATISYIK 91
D+ G +I + IK
Sbjct: 903 DLLGAQITSPTRQAAIK 919
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT +E+TG DR GLL E++A L+ L+ ++ SA + T R + +V D G I
Sbjct: 852 SHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDL-LGAQIT 910
Query: 173 DQKRLLKIKKLLCNVL 188
R IK+ L +
Sbjct: 911 SPTRQAAIKRALIALF 926
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR GLL ++T L + L I A ++T G +V D F+VTD G +
Sbjct: 864 DRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDLLGAQI 909
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI 881
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD + Q + D S ++ +
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI 881
>gi|336123498|ref|YP_004565546.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
gi|335341221|gb|AEH32504.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
Length = 874
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK---TTVETNASFLNSMR------------SSVG 109
GY++D F V D NG I ++ S IK + +ET +R + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEECHPSLIKHLLSGLETGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K + T +EL D PGLL+ V A DL+ ++ A+I T RA L +
Sbjct: 790 FLPTKSNKRTLMELVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GCAIEDQKRLLKIKKLLCNV 187
G E+++ L+ + L+ NV
Sbjct: 850 GKLSEEEECTLR-EMLIKNV 868
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 32/144 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIGDQ------------------ATISYIKT------TVE 95
++SD GY+ D F +T++NG+ + + ++S+ TV+
Sbjct: 719 LTSDDGYVFDSFIITELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVK 778
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +E+ D+PGLL+++S + T+L ++ +A+I T +
Sbjct: 779 TDVRFLKETK--------KEHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEK 830
Query: 156 AAALLHVKDQSSGCAIEDQKRLLK 179
A + ++ E+++ LL+
Sbjct: 831 AEDFFILTNEKGIALTEEERGLLE 854
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
E ELE+ D+ GLL+ I++I E L I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|240949654|ref|ZP_04753989.1| PII uridylyl-transferase [Actinobacillus minor NM305]
gi|240295912|gb|EER46588.1| PII uridylyl-transferase [Actinobacillus minor NM305]
Length = 862
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+++ N P V++ N+ AT I + +++ + + Q L + I A I +S+ G
Sbjct: 664 LLKQQNLPLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGL 723
Query: 67 LMDVFYVTDINGQKIG----DQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI--- 119
+ D F VT+ NGQ + +Q S IK ++ + +++ + K T +
Sbjct: 724 VYDSFIVTESNGQALNEIRCEQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRFL 783
Query: 120 ----------ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
EL DR GLL+++S + L +++A+I T R V S
Sbjct: 784 ANSPPNQTAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSHEA 843
Query: 170 AIEDQKRLLK 179
E+Q+ LK
Sbjct: 844 LSEEQQHQLK 853
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ I + L + A+I+T+G +V+D F V+ S + +
Sbjct: 793 FELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSHEALS----EEQ 848
Query: 388 QHQIGRTIL 396
QHQ+ + IL
Sbjct: 849 QHQLKQHIL 857
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P + DN+ E T+I+VD+ +R G+L ++ + L D N+ I A I+
Sbjct: 814 DKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIA 873
Query: 62 SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVET 96
+ G ++D FYV D+ G K ++ + ++ + T
Sbjct: 874 TYGEQVVDTFYVKDMFGLKYHSESKLRGLEAKLRT 908
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 23/199 (11%)
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLK 179
T D PG+ + ++ L + +VV A +T + V+D + G E RL +
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQD-AEGHPFE-AARLPR 791
Query: 180 IKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTI 239
+ +++ L+ G++ S ++ ER +N H+T
Sbjct: 792 LTQMIHKTLK--GEVVAREALKSRDKIKKRER------------------AFNVPTHITF 831
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
+ YT + + ++DRP LL+D L D + + + T + +Y+K + G
Sbjct: 832 DNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYVKDMFGL 891
Query: 300 PISSEAERQRVMACLEAAI 318
SE++ + + A L AI
Sbjct: 892 KYHSESKLRGLEAKLRTAI 910
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + + I A I+T G +V DTF+V D G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYVKDMFG 890
>gi|260582819|ref|ZP_05850605.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
gi|260094145|gb|EEW78047.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
Length = 863
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|68250319|ref|YP_249431.1| PII uridylyl-transferase [Haemophilus influenzae 86-028NP]
gi|81170617|sp|Q4QJM6.1|GLND_HAEI8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68058518|gb|AAX88771.1| [protein-PII] uridylyltransferase [Haemophilus influenzae 86-028NP]
Length = 863
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E ++EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG-YLMDVFYVTDINGQKIGD-- 83
AT + + S +R + +++ ++ + A I++ + D+FY+ D GQ G
Sbjct: 730 ATEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGKHD 789
Query: 84 ----QATISYIK-------TTVETNASFLNSMRSSVGVVPS--------KEYTSIELTGT 124
QA + Y++ T A+ L ++ V PS ++ T IE +G
Sbjct: 790 AVQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEASGR 849
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL++++ VL D ++ SA+I + RA + +V
Sbjct: 850 DRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYV 887
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N++ E ATVI+ +R G+L ++ L D L +T A I G DVFYVT
Sbjct: 829 PSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVT 888
Query: 75 DINGQKIGDQATISYIK 91
+ +K+ D+A ++
Sbjct: 889 HKD-EKLVDEAISESVR 904
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 33/180 (18%)
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV-VTGRMEAYQEYYIKHVDGFPISS 303
R T V I S DR ++ D V ++ V T+ T + + +YI+ G P
Sbjct: 728 RAATEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGK 787
Query: 304 E--AERQ------RVMACLEAAIERRASEGLE------------------------LELY 331
+RQ R +A E + RR + L+ +E
Sbjct: 788 HDAVQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEAS 847
Query: 332 TDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQI 391
DR GLL+D+ +L + GL + A+I G + D F+VT VD I +S+++ +
Sbjct: 848 GRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKDEKLVDEAISESVRNGL 907
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++ T DR GLL+ I RI + + ++ A I+T+G + +D FF+TD G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 387 IQHQIGRTILQVKGNLNT 404
+Q + + L K N NT
Sbjct: 874 LQQTLKQE-LDDKNNGNT 890
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +VVI ND+ T + + +++R G+L + + + +++ A I++ G DVF++
Sbjct: 798 PTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFI 857
Query: 74 TDINGQKIGDQATISYIKTTVE 95
TD++G+ + D ++ T++
Sbjct: 858 TDLDGEPVSDPTLCQELQQTLK 879
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 45 IQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIG-DQATISYIKTTVETNASFLN 102
+ L L L I A I+S G+ +D + V D +G IG D A I I+ T+ + +
Sbjct: 719 VNALDSLGLTIMDARIITSVDGFSLDTYIVLDEHGTPIGEDWARIEQIRKTLTETLKYPD 778
Query: 103 SMRSSVGV----------VPSK---------EYTSIELTGTDRPGLLSEVSAVLTDLSCS 143
++V VP++ + T++++ DRPGLL+ + +
Sbjct: 779 RYATTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEIL 838
Query: 144 VVSAEIWTHNARAAALLHVKD 164
V +A I T RA + + D
Sbjct: 839 VQNARIATLGERAEDVFFITD 859
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
+R+ P P+V I+N + T+I+V ++R G+L ++ + LNL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGARIT 902
Query: 173 DQKRLLKIKKLLCNVL 188
R IK+ L ++L
Sbjct: 903 APTRQAAIKRALVHLL 918
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 33/203 (16%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH------NARAAALL 160
+VG ++ T + + D P LLS ++ ++V A+I+T + A +
Sbjct: 728 NVGFDEARGVTELTILAADHPWLLSIIAGACASAGANIVDAQIYTTTDGQALDTIAISRE 787
Query: 161 HVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+ +D+ G +R +I +++ VL G LR P + S A +RL +
Sbjct: 788 YERDEDEG------RRAARIAEIIEQVL--EGRLRLPDVMPSRA----AGKRLRPFVV-- 833
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
P VTI + +T + + DRP LLF ++ + + V
Sbjct: 834 -------------EPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHV 880
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 881 ATFGERARDVFYVTDLLGARITA 903
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P ++ DN+ E T I+V++ +R G+L + + L +L L I+ A I ++ G +D FYV
Sbjct: 838 PTQLHFDNETSESRTAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYV 897
Query: 74 TDINGQKIGDQATISYIKTTV 94
+++G KI D S+++ +
Sbjct: 898 NELDGSKILDPGRQSFVERKI 918
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCA 170
P + YT ++ DR GL S ++ + ++++A+++T +A +V D +G A
Sbjct: 732 PDRGYTVAKICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSDAIVLDTFYVTDARTG-A 790
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
+ +++ K+++LL VL GD I+ RV R L+Q D+ +L N
Sbjct: 791 LANREEKEKLEELLNKVL--TGDEVNFRALIAKQRV---NRPLYQSYEGDQMPTQLHFDN 845
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
S TA+ + ++DR LL+ L +++ + +VT + A
Sbjct: 846 ETSESR-----------TAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDT 894
Query: 291 YYIKHVDGFPI 301
+Y+ +DG I
Sbjct: 895 FYVNELDGSKI 905
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
+R+ P P+V I+N + T+I+V ++R G+L ++ + LNL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGARIT 902
Query: 173 DQKRLLKIKKLLCNVL 188
R IK+ L ++L
Sbjct: 903 APTRQTAIKRALVHLL 918
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 23/198 (11%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQS 166
+VG ++ T + + D P LLS ++ ++V A+I+T AL +
Sbjct: 728 NVGFDEARGVTELTILAADHPWLLSIIAGACASAGANIVDAQIYT-TTDGQALDTIAISR 786
Query: 167 SGCAIEDQ-KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
ED+ +R +I +++ VL G LR P + S A G +RL +
Sbjct: 787 EYEHDEDEGRRATRIAEIIEQVL--EGRLRLPDVVPSRA----GGKRLRPFVV------- 833
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
P VTI + +T + + DRP LLF ++ + + V T
Sbjct: 834 --------EPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 286 EAYQEYYIKHVDGFPISS 303
A +Y+ + G I++
Sbjct: 886 RARDVFYVTDLLGARITA 903
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-D 380
A+E LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+TD SG P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
Query: 381 PK 382
P+
Sbjct: 875 PE 876
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATIS---------------YIKTTV 94
L L I A I+ S + ++ F V D G+ I D A I Y +
Sbjct: 733 LGLSIHDARIATSSNDWTLNTFIVLDDLGRAIRDPARIEEIRAHLVEELDDPDDYPQIVT 792
Query: 95 ETNASFLNSMRSSVGVV----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
L + V+ P+ E T +ELT DRPGLL+ V + + S+ +A+I
Sbjct: 793 RHTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIA 852
Query: 151 THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNG 192
T R + + D+ SG + D +R +++ L VL G
Sbjct: 853 TLGERVEDVFFITDK-SGAPLTDPERQQRLRARLIEVLDVAG 893
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V+I+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
TD +G + D
Sbjct: 865 TDKSGAPLTD 874
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 32/144 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIGDQ------------------ATISYIKT------TVE 95
++SD GY+ D F +T++NG+ + + ++S+ TV+
Sbjct: 719 LTSDDGYVFDNFIITELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVK 778
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +E+ D+PGLL+++S + T+L ++ +A+I T +
Sbjct: 779 TDVRFLKETK--------KEHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEK 830
Query: 156 AAALLHVKDQSSGCAIEDQKRLLK 179
A + ++ E+++ LL+
Sbjct: 831 AEDFFILTNEKGIALTEEERGLLE 854
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
E ELE+ D+ GLL+ I++I E L I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
+ G+KI D + I+ T+ N +S +M ++ G E +++
Sbjct: 135 KASTGRKIDDPELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 194
Query: 123 -------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
DRPGLL ++ +++D++ +V S E T A A HV
Sbjct: 195 IYDGPERSLLVVETADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAKFHV------- 247
Query: 170 AIEDQKRLLKIKKLLCNVLR 189
+ + + +K++L N LR
Sbjct: 248 SYRGKPLMEALKQVLSNSLR 267
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N E TVI+V ++R G+L ++ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKI 81
D+ G +I
Sbjct: 897 DLLGAQI 903
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 846 SERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMS 200
R IK+ L ++L NGD+ S
Sbjct: 905 APTRQAAIKRALIHLL-ANGDVEQKQAS 931
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D G +R +I +++ ++L G LR P + AR G+ +L
Sbjct: 789 YDRDDDEG------RRATRIGEMIEDIL--EGKLRLPEVV---ARRASGKGKLKP----- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P V I + YT + + DRP LL+ ++ + + V
Sbjct: 833 ----------FTVEPEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 883 ATFGERARDVFYVTDLLGAQITA 905
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 284 RMEAYQEYYIKHVDG---FP--ISSEAERQ--RVMACLEAAIER-RASEGLELELYTDDR 335
R+E +++ ++ +D +P +S RQ E IE+ A+E LEL DR
Sbjct: 769 RIEEMRQHLVEELDDPDDYPDIVSRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDR 828
Query: 336 FGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIGRT 394
GLL+ + RI E + + A+I+T+G +V+D FF+T+ +G P+ DP+ Q Q+
Sbjct: 829 PGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPLTDPE----RQQQLRER 884
Query: 395 ILQVKG 400
+++V G
Sbjct: 885 LIEVLG 890
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 21/187 (11%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDGGYLMDVFYVTDINGQK 80
D+ E T + + + + + + L L I A I+ S + ++ F V D GQ
Sbjct: 704 DMAEGGTKVFIHTRSVDDLFAATAAAMEQLGLSIHDARIATSHNNWTLNTFIVLDNVGQP 763
Query: 81 IGDQATIS---------------YIKTTVETNASFLNSMRSSVGVV----PSKEYTSIEL 121
I D I Y L + V+ P+ E T +EL
Sbjct: 764 IRDLERIEEMRQHLVEELDDPDDYPDIVSRHTPRQLKHFKVPTEVLIEQDPANERTLLEL 823
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
T DRPGLL+ V + + ++ +A+I T R + + ++ +G + D +R +++
Sbjct: 824 TAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNK-AGEPLTDPERQQQLR 882
Query: 182 KLLCNVL 188
+ L VL
Sbjct: 883 ERLIEVL 889
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V+I+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
T+ G+ + D
Sbjct: 865 TNKAGEPLTD 874
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND TV+++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q++ D S ++ +
Sbjct: 861 TDAHNQQLSDPQLCSRLQDAI 881
>gi|283781890|ref|YP_003372645.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
gi|283440343|gb|ADB18785.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
Length = 885
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV DN+ E T++ V + +R G+L + + L +L L ++ A I + ++DVFYV
Sbjct: 795 PTRVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVDVFYV 854
Query: 74 TDINGQKIGDQATISYIKTTV 94
T + G KI D+ + I+ +
Sbjct: 855 TTLGGAKIVDEKRLEEIRAKL 875
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V +DND + ATV++ +R G+L + + L D L I A+I G +D FYV
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGL 129
G+KI + I+ +K A L+++ + P+ RPGL
Sbjct: 894 TAQGEKITETRRINALK------ADLLDALEQNEAGAPAA-----------RPGL 931
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDL--NLVITKAYISSDGGYLMDVFYVTDINGQKIG 82
++A I V + +R G+ ++ + L N+V + + S G L DVFYV D+ G +G
Sbjct: 733 QNAAEIVVAAKDRQGLFADLALTISSLGGNVVGARVFTSRQGQAL-DVFYVQDVTGAPLG 791
Query: 83 -------------DQATISYIKTTVETNASFLNSMRSSVGVVPS--------KEYTSIEL 121
+A VE + ++ + PS + T +E
Sbjct: 792 CENPRALRRLADALEAAGKGEPLVVEPRRGAEQARAAAFAIAPSVTVDNDASDDATVVEA 851
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
+G DRPGLL ++ L D S+ SA I + RA +V+ + G I + +R+ +K
Sbjct: 852 SGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ-TAQGEKITETRRINALK 910
Query: 182 KLLCNVLRTN 191
L + L N
Sbjct: 911 ADLLDALEQN 920
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI++ ++R G+L E+ + LNL I A++++ G DVFYVT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DINGQKIGDQATISYIKTTV 94
D+ G +I + IK+ +
Sbjct: 896 DLLGAQISAPTRQAAIKSAL 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL E++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIS 903
Query: 173 DQKRLLKIKKLLCNVL 188
R IK L +V+
Sbjct: 904 APTRQAAIKSALTHVM 919
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 33/214 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG + T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ +VL G LR P + + R + G+ R
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVL--EGKLRLPE--VVARRTVRGKAR-------- 830
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P VTI + YT + + DRP LL++ ++ + + V
Sbjct: 831 ---------PFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHV 881
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACL 314
T A +Y+ + G IS+ + + + L
Sbjct: 882 ATFGERARDVFYVTDLLGAQISAPTRQAAIKSAL 915
>gi|358448298|ref|ZP_09158802.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
gi|357227395|gb|EHJ05856.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
Length = 881
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR GLL+ I ++L E+ + + A+I+T+G +V+D FFVTD G P+ +P + +
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPIREPAVCQA 868
Query: 387 IQHQI 391
+Q +
Sbjct: 869 LQQDL 873
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV++V + +R G+L + Q L++ + ++ A I++ G + DVF+V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFV 852
Query: 74 TDINGQKIGDQA 85
TD +G+ I + A
Sbjct: 853 TDEHGEPIREPA 864
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ I +I E+ L ++ A+I+T+G +V+D FF+TDA + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND TV+++ + +R G+L + + ++ +L + A I++ G + DVF++
Sbjct: 801 PPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q++ D S ++ +
Sbjct: 861 TDAHNQQLSDPQLCSRLQDAI 881
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L LN+ I A I++ G ++D FYV
Sbjct: 830 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 74 TDINGQKIGDQA 85
D+ G K +A
Sbjct: 890 KDMFGLKFHSEA 901
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + A A ++D + G E RL ++++
Sbjct: 741 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQD-ADGHPFE-ADRLPRLRQ 798
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ LR G++ P +I S + R + H+T +
Sbjct: 799 MIDKTLR--GEV-IPREAIKSRDKIKKRER-----------------AFRVPTHITFDND 838
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 839 GSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFGLKFH 898
Query: 303 SEAER----QRVMACLEAAIERRAS 323
SEA++ +++ + A +ER S
Sbjct: 899 SEAKQRSLDRKLREAISAGVERAES 923
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 846 IEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFG 894
>gi|417821593|ref|ZP_12468207.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|419830711|ref|ZP_14354196.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|419834394|ref|ZP_14357849.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|422918100|ref|ZP_16952418.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|423823002|ref|ZP_17717012.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|423856967|ref|ZP_17720819.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|423883595|ref|ZP_17724406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|423957568|ref|ZP_17735311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|423985548|ref|ZP_17738862.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|423998525|ref|ZP_17741777.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|424017422|ref|ZP_17757251.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|424020347|ref|ZP_17760130.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|424625721|ref|ZP_18064182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|424630209|ref|ZP_18068493.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|424634253|ref|ZP_18072353.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|424637330|ref|ZP_18075338.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|424641238|ref|ZP_18079121.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|424649306|ref|ZP_18086969.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|443528223|ref|ZP_21094267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
gi|340039224|gb|EGR00199.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|341636982|gb|EGS61676.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|408011662|gb|EKG49469.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|408017616|gb|EKG55107.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|408022723|gb|EKG59918.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|408023118|gb|EKG60298.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|408032022|gb|EKG68621.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|408054177|gb|EKG89163.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|408620484|gb|EKK93496.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|408634978|gb|EKL07213.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|408640314|gb|EKL12110.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|408640661|gb|EKL12449.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|408649216|gb|EKL20533.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|408656672|gb|EKL27766.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|408663665|gb|EKL34527.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|408852424|gb|EKL92252.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|408859619|gb|EKL99276.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|408866924|gb|EKM06295.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|443453481|gb|ELT17304.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
Length = 876
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIK 181
L++K
Sbjct: 859 HLRVK 863
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSS 107
G+++D F V D +G+ I + A I + IKT N ++++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 SSGCAIEDQKRLLKIK 181
+ G E+Q+ L+ K
Sbjct: 848 AGGRLSEEQQNELRDK 863
>gi|257464714|ref|ZP_05629085.1| PII uridylyl-transferase [Actinobacillus minor 202]
gi|257450374|gb|EEV24417.1| PII uridylyl-transferase [Actinobacillus minor 202]
Length = 849
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+++ N P V++ N+ AT I + +++ + + Q L + I A I +S+ G
Sbjct: 651 LLKQQNLPLVLVGNEYARGATEIFIHCEDQNQLFARIAQELSQKKISIHDAQIITSENGL 710
Query: 67 LMDVFYVTDINGQKIG----DQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSI--- 119
+ D F VT+ NGQ + +Q S IK ++ + +++ + K T +
Sbjct: 711 VYDSFIVTESNGQALNEIRCEQIQQSLIKVLLDPASKTFKAIKKPIKHQTFKRKTKVRFL 770
Query: 120 ----------ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
EL DR GLL+++S + L +++A+I T R V S
Sbjct: 771 ANSPPNQTAFELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSYEA 830
Query: 170 AIEDQKRLLK 179
E+Q+ LK
Sbjct: 831 LSEEQQHQLK 840
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ I + L + A+I+T+G +V+D F V+ S + +
Sbjct: 780 FELFTLDREGLLAQLSHIFNQLELVLINAKITTIGERVEDFFVVSTLSYEALS----EEQ 835
Query: 388 QHQIGRTIL 396
QHQ+ + IL
Sbjct: 836 QHQLKQHIL 844
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I RI ++ + + A+I+T+G +V+D FF+ D+ G P+ DP + +
Sbjct: 830 LEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIVDSQGKPLGDPVLCEK 889
Query: 387 IQHQI 391
+Q +I
Sbjct: 890 LQQEI 894
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 22/183 (12%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQA 85
AT I V S ++ + + V L LNL I A I SS+ G+ +D F+V + +G+ +G+
Sbjct: 717 ATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIYSSNSGHTIDTFFVLNEDGEPLGNNP 776
Query: 86 TI-SYIKTTVETNASFLNSMRSSVG--------VVPSKEYTSI-----------ELTGTD 125
T+ I+ T+ +++ R +G S TS+ E+ D
Sbjct: 777 TLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYFASPTRTSLNTDMIRNCSVLEVISPD 836
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185
RPGLL+ + + D +++A+I T R + + D S G + D K+++ +C
Sbjct: 837 RPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIVD-SQGKPLGDPVLCEKLQQEIC 895
Query: 186 NVL 188
L
Sbjct: 896 EQL 898
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 43/71 (60%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
+P R ++ D+ + +V++V S +R G+L + + +D ++ + A I++ G + D+F+
Sbjct: 813 SPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFF 872
Query: 73 VTDINGQKIGD 83
+ D G+ +GD
Sbjct: 873 IVDSQGKPLGD 883
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSS 107
G+++D F V D +G+ I + A I + IKT N ++++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 SSGCAIEDQKRLLKIK 181
+ G E+Q+ L+ K
Sbjct: 848 AGGRLSEEQQNELRDK 863
>gi|422308202|ref|ZP_16395355.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
gi|408618067|gb|EKK91156.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
Length = 876
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIK 181
L++K
Sbjct: 859 HLRVK 863
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSS 107
G+++D F V D +G+ I + A I + IKT N ++++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 SSGCAIEDQKRLLKIK 181
+ G E+Q+ L+ K
Sbjct: 848 AGGRLSEEQQNELRDK 863
>gi|417825496|ref|ZP_12472084.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
gi|340046981|gb|EGR07911.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
Length = 876
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIK 181
L++K
Sbjct: 859 HLRVK 863
>gi|153828190|ref|ZP_01980857.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
gi|148876279|gb|EDL74414.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
Length = 881
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 863
Query: 177 LLKIK 181
L++K
Sbjct: 864 HLRVK 868
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 11 RMNPP----RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
R N P +V IDN + T+++V + +R G+L + + L+++N + +A I+++G
Sbjct: 782 RRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNR 841
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTV 94
++D FY+TD+ +KI D + I+ +
Sbjct: 842 VIDSFYITDMEYRKITDAKLLKEIEEKI 869
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR G+L IT++L E +RRA I+T G +V D+F++TD + D K++
Sbjct: 805 VEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNRVIDSFYITDMEYRKITDAKLLKE 864
Query: 387 IQHQIGRTI 395
I+ +I + I
Sbjct: 865 IEEKILQVI 873
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LEL DR GLL+ + I E+ L ++ A+I+T+G +V+D FF+TDA P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IQHQI 391
+Q I
Sbjct: 877 LQDAI 881
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V I ND TV+++ + +R G+L V ++ +L + A I++ G + DVF++T
Sbjct: 802 PQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 75 DINGQKIGDQATISYIKTTV 94
D + Q + D S ++ +
Sbjct: 862 DAHNQPLSDPLLCSRLQDAI 881
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV I+N + TVI+V+ ++ G+L E+ + DL+L I A+I++ ++D FYVT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT 893
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + IK
Sbjct: 894 DLVGHKISNATRQGNIK 910
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 98 ASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA 157
+F R + S ++T IE+ G D PGLLSE++ +++DLS + SA I T + +
Sbjct: 828 GAFKVEPRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVI 887
Query: 158 ALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL------RTNGDLRTPSMS 200
+V D G I + R IK+ L +L RTNG R+P +
Sbjct: 888 DSFYVTDL-VGHKISNATRQGNIKRKLLALLGAENGARTNG--RSPQAA 933
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
EGL+L GLLS++T ++ + L I A I+T KV D+F+VTD G+ +
Sbjct: 852 EGLDLP-------GLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVTDLVGHKISNA- 903
Query: 384 VDSIQHQIGRTILQVKGNLN---TPPKLPQEPA 413
+ Q I R +L + G N T + PQ A
Sbjct: 904 --TRQGNIKRKLLALLGAENGARTNGRSPQAAA 934
>gi|413934235|gb|AFW68786.1| hypothetical protein ZEAMMB73_680007 [Zea mays]
Length = 277
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D F +T
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 -DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
G+KI D + ++ T+ N +S +M ++ G E +++
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 190
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
DRPGLL ++ +++D+S +V S E T A A HV + G
Sbjct: 191 IYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFHVSYR--G 248
Query: 169 CAIEDQKRLLKIKKLLCNVLR 189
+ + ++++LCN LR
Sbjct: 249 RTLTE-----ALQQVLCNSLR 264
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
R+ P P V I+N + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 LMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 901
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 902 APTRQAAIKRALIHLL-ANGD 921
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 28/201 (13%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA----ALLHV 162
+VG + T + + D P LLS ++ ++V A+I+T A A+
Sbjct: 726 NVGFDEGRGVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITRE 785
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRD 222
D+ ++ +R +I + VL G LR P + AR + RL +
Sbjct: 786 YDRDD----DEGRRATRIGDTIEQVL--EGKLRLPDV---MARRTASKTRLKPFIV---- 832
Query: 223 FERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
P VTI + YT + + DRP LLF ++ + + V T
Sbjct: 833 -----------EPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVAT 881
Query: 283 GRMEAYQEYYIKHVDGFPISS 303
A +Y+ + G I++
Sbjct: 882 FGERARDVFYVTDLLGAQITA 902
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
R+ P P V I+N + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 LMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 901
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 902 APTRQAAIKRALIHLL-ANGD 921
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 28/201 (13%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA----ALLHV 162
+VG + T + + D P LLS ++ ++V A+I+T A A+
Sbjct: 726 NVGFDEGRGVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITRE 785
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRD 222
D+ ++ +R +I + VL G LR P + AR + RL +
Sbjct: 786 YDRDD----DEGRRATRIGDTIEQVL--EGKLRLPDV---MARRTASKTRLKPFIV---- 832
Query: 223 FERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
P VTI + YT + + DRP LLF ++ + + V T
Sbjct: 833 -----------EPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVAT 881
Query: 283 GRMEAYQEYYIKHVDGFPISS 303
A +Y+ + G I++
Sbjct: 882 FGERARDVFYVTDLLGAQITA 902
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P V + +R Y T V I +KD P L TV LT + + ++T + +
Sbjct: 703 PLVLVGKTDERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDT 762
Query: 292 YIKHVDG--------------------------FPISSEAERQRVMACLEAAIERRASEG 325
Y+ +G FP R + A E +
Sbjct: 763 YVIMEEGGAAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLAND 822
Query: 326 LE-----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV- 379
L+ L++ T DR GLL++I +I G+ I+ A+I+T G + +D F++TD +G +
Sbjct: 823 LDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDTNGEMLH 882
Query: 380 DPKIVDSIQHQI 391
DP+ +++ ++
Sbjct: 883 DPEFCATLKERL 894
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
+ + ND+ ATV+ + +++R G+L E+ + V ++I A I++ G DVFY+TD
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 77 NGQKIGD 83
NG+ + D
Sbjct: 877 NGEMLHD 883
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 20 DNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDING 78
D + AT + + + + + + L LNL I A I++ Y +D + + + G
Sbjct: 711 DERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDTYVIMEEGG 770
Query: 79 QKIGDQATISYI----KTTVETNASF-----------LNSMRSSVGVVPSKEY----TSI 119
+ D+ I I +TT+ F L R + + + + T +
Sbjct: 771 AAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLANDLDSRATVL 830
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
++T DRPGLL+E+ + + A+I T RA + ++ D ++G + D +
Sbjct: 831 DITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITD-TNGEMLHDPEFCAT 889
Query: 180 IKKLL 184
+K+ L
Sbjct: 890 LKERL 894
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L +L L I + +S+ + DVFYV
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 TDINGQKIGDQATISYIK 91
DI GQKI DQ + I+
Sbjct: 870 KDIFGQKILDQDKLEEIR 887
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+++YT D+ GLL IT L E GL I +++ST +V D F+V D G +
Sbjct: 826 IDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIFGQKI 877
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L L L I + IS+ + DVFYV
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 TDINGQKIGDQATISYIK 91
DI GQKI + A + I+
Sbjct: 868 KDIFGQKISEPAKLEEIR 885
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQ 174
YT+ + D PGL S ++ V+ +++ A+I T+ N + +L V + G I ++
Sbjct: 708 YTNCTVCTYDIPGLFSMITGVMAANGMNILGAQIHTNTNEKVLDILQV-NSPQGFVITEE 766
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
R R DLR +VL G+ R+ Q L A R R + ++
Sbjct: 767 SRWA----------RFETDLR---------QVLEGKVRVGQ-LVAKR--HRPSILTEKAK 804
Query: 235 P----HVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
P V I + DYT + I + D+ LL+ LT + + + T +
Sbjct: 805 PTVPARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADV 864
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIE 319
+Y+K + G IS A+ + + L AA++
Sbjct: 865 FYVKDIFGQKISEPAKLEEIRKELLAAVD 893
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++Y D+ GLL IT L GL I ++IST +V D F+V D G + +P ++
Sbjct: 824 IDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKISEPAKLEE 883
Query: 387 IQHQI 391
I+ ++
Sbjct: 884 IRKEL 888
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+ND+ E +VI+V S++R G+L ++ + L DL+L I A+I++ G +D FYV
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVR 892
Query: 75 DINGQKI 81
D+ G K+
Sbjct: 893 DLIGHKL 899
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 107 SVGVVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVK 163
S+ + P S++ T I L D P LLS ++ ++V A+I+T + RA ++ +K
Sbjct: 723 SIMMTPRASEDVTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDIILIK 782
Query: 164 DQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDF 223
++ ++ KR ++K+++ L+ G +R P AR H + + +F
Sbjct: 783 -RAFDFDEDETKRARRVKEIIEQALK--GTIRLPD---EIAR--HAPPKRTRKIF----- 829
Query: 224 ERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG 283
+ P V I + ++ + ++S DRP LL D L+D+ + + T
Sbjct: 830 --------DVTPTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTF 881
Query: 284 RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+A +Y++ + G +++ + R+ L + ++ + ++
Sbjct: 882 GEKAIDSFYVRDLIGHKLTNPQRQTRICHKLLSIVQTQTAD 922
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ + DR GLLSD+T+ L + L I A I+T G K D+F+V D G+ + +P+
Sbjct: 848 IEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVRDLIGHKLTNPQRQTR 907
Query: 387 IQHQI 391
I H++
Sbjct: 908 ICHKL 912
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L D N+ + A I++ G ++D FYV
Sbjct: 850 PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 74 TDINGQKIGDQA 85
D+ G K+ +A
Sbjct: 910 KDMFGLKLHGEA 921
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
++ T + D PG+ + ++ L + +VV A +T + A V+D
Sbjct: 751 RDVTRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKPY-- 808
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
D+ RL +++K++ L +G++ T +S +V ++R Q F
Sbjct: 809 DESRLPRLRKMIDKTL--SGEVVTSQALVSKDKV---KKRDAQFRF-------------- 849
Query: 233 SRPHVTILDCSDRD-YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P D + YT + + ++DRP LLFD L D V + T + +
Sbjct: 850 --PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTF 907
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRA 322
Y+K + G + EA+++ + L A+E A
Sbjct: 908 YVKDMFGLKLHGEAKQRTIEKRLREAVEHGA 938
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ + L + + + A+I+T G +V DTF+V D G
Sbjct: 866 IEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDMFG 914
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++ T DR GLL+ I R+ E+ L ++ A I+T+G +V+D FF+T G PV DP +
Sbjct: 818 VDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFITQKDGGPVTDPDLCQR 877
Query: 387 IQHQI 391
+Q ++
Sbjct: 878 LQQRL 882
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V+I ND+ TV+ V +++R G+L + + ++ +L++ A I++ G + DVF++
Sbjct: 802 PTQVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFI 861
Query: 74 TDINGQKIGD 83
T +G + D
Sbjct: 862 TQKDGGPVTD 871
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V DND TVI+V + +R +L + + L + + +I A+I+ G D FYVT
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G KI D + + I+ + AS
Sbjct: 884 DLTGDKITDPSRLETIRAALVDAAS 908
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQ--FLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT++ V + + GI + + LV N++ + + ++ GY +D F V D GQ+ G+
Sbjct: 725 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIH-TTRTGYAVDNFLVQDPLGQRFGED 783
Query: 85 ATISYIKTTV----ETNASFLNSM------RSSVG---VVPS--------KEYTSIELTG 123
+ I+ ++ E A + + R G V PS +T IE++
Sbjct: 784 NQLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEVSA 843
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRP LL+ ++ L + + SA I + RAA +V D +G I D RL I+
Sbjct: 844 RDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTDL-TGDKITDPSRLETIRAA 902
Query: 184 LCNV 187
L +
Sbjct: 903 LVDA 906
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR LL+ + R L E+ IR A I+ G + DTF+VTD +G+ + DP +++
Sbjct: 839 IEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTDLTGDKITDPSRLET 898
Query: 387 IQ 388
I+
Sbjct: 899 IR 900
>gi|156975508|ref|YP_001446415.1| PII uridylyl-transferase [Vibrio harveyi ATCC BAA-1116]
gi|166232255|sp|A7N1X9.1|GLND_VIBHB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156527102|gb|ABU72188.1| hypothetical protein VIBHAR_03239 [Vibrio harveyi ATCC BAA-1116]
Length = 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V S ++ + V+ L N + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVGVVP--SKEY 116
D +G+ I G + ++ IKT N ++++ V +P SK+
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL++V DL ++ +A+I T RA L + ++ G E+Q+
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQT 858
Query: 177 LLKIK 181
L+ K
Sbjct: 859 ELREK 863
>gi|85710052|ref|ZP_01041117.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
gi|85688762|gb|EAQ28766.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
Length = 924
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V DN H TVI+V + +R +L + L NL++ A+I++ G D FYVT
Sbjct: 830 PQVNFDNSASNHFTVIEVTARDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYVT 889
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G K+ ++ I+ ++ AS
Sbjct: 890 DLTGSKVTAPERLAEIEASLLDAAS 914
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQ--FLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT++ V + + G+ + L N++ + + + +G Y +D F V D++ + ++
Sbjct: 731 ATLVSVIAADHPGLFYRIAGGIHLAGANIIDARIHTALNG-YAIDNFLVQDLHAKPFREE 789
Query: 85 ATISYIKTTVE-------------TNASFLNSMRSSVGVVP--------SKEYTSIELTG 123
I+ +K + +S + V P S +T IE+T
Sbjct: 790 TQIARLKQGIRDALLAQVELVPKLAARPLAHSRAKAFAVAPQVNFDNSASNHFTVIEVTA 849
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRP LL+ ++ L + V SA I + AA +V D +G + +RL +I+
Sbjct: 850 RDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYVTD-LTGSKVTAPERLAEIEAS 908
Query: 184 LCNV 187
L +
Sbjct: 909 LLDA 912
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + + L D +L + A++S+ G +D FYV
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 TDINGQKI-GDQAT 86
T +G + GD+A
Sbjct: 791 TGTDGAPLPGDEAA 804
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + L +R A +ST+G D F+VT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 807 ARKLEETL 814
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
AKL + P V I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 826 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 885
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 886 RARDVFYVTDLLGAQI 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 902
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 903 APTRQAAIKRALVHLL-ANGD 922
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THNARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+ T + RA + +
Sbjct: 725 NVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISRE 784
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G + + +
Sbjct: 785 YDRDEDEG------RRATRIGETIEEVL--EGKLRLPEA--VARRASSGSKAKLRAFVVE 834
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ E +N N SDR YT + + DRP LL+ ++ + + V
Sbjct: 835 PEVE----INNN---------WSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 880
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 881 ATFGERARDVFYVTDLLGAQITA 903
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
AKL + P V I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 846 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 905
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 906 RARDVFYVTDLLGAQI 921
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 864 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 922
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 923 APTRQAAIKRALVHLL-ANGD 942
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THNARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+ T + RA + +
Sbjct: 745 NVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISRE 804
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G + + +
Sbjct: 805 YDRDEDEG------RRATRIGETIEEVL--EGKLRLPEA--VARRASSGSKAKLRAFVVE 854
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ E +N N SDR YT + + DRP LL+ ++ + + V
Sbjct: 855 PEVE----INNN---------WSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 900
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 901 ATFGERARDVFYVTDLLGAQITA 923
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + + L D +L + A++S+ G +D FYV
Sbjct: 731 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 TDINGQKI-GDQAT 86
T +G + GD+A
Sbjct: 791 TGTDGAPLPGDEAA 804
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + L +R A +ST+G D F+VT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 807 ARKLEETL 814
>gi|444424960|ref|ZP_21220409.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241745|gb|ELU53265.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V S ++ + V+ L N + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVGVVP--SKEY 116
D +G+ I G + ++ IKT N ++++ V +P SK+
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL++V DL ++ +A+I T RA L + ++ G E+Q+
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQT 858
Query: 177 LLKIK 181
L+ K
Sbjct: 859 ELREK 863
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V S ++ + V+ L N + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQ---ATISYIKTTVET------------NASFLNSMRSSVGVVP--SKEY 116
D +G+ I + A I ++ +E+ N ++++ V +P SK+
Sbjct: 739 LDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL++V DL ++ +A+I T RA L + ++ G E+Q+
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQT 858
Query: 177 LLKIK 181
L+ K
Sbjct: 859 QLREK 863
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
AKL + P V I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 906
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 907 APTRQAAIKRALVHLL-ANGD 926
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THNARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+ T + RA + +
Sbjct: 729 NVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G + + +
Sbjct: 789 YDRDEDEG------RRATRIGETIEEVL--EGKLRLPEA--VARRASSGSKAKLRAFVVE 838
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ E +N N SDR YT + + DRP LL+ ++ + + V
Sbjct: 839 PEVE----INNN---------WSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 884
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 885 ATFGERARDVFYVTDLLGAQITA 907
>gi|148825740|ref|YP_001290493.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229847338|ref|ZP_04467440.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
gi|166226151|sp|A5UBF9.1|GLND_HAEIE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148715900|gb|ABQ98110.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229809763|gb|EEP45487.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
Length = 863
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLSALSITPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+ GLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + +Q G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 861
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
+ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LHENKKEHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|294085165|ref|YP_003551925.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664740|gb|ADE39841.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 972
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 7 KLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
K IRR PPRV++ N++ + +VI+V+ + G L ++ + +V L L I + IS+ G
Sbjct: 863 KRIRRFPVPPRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQSSSISTYGE 922
Query: 66 YLMDVFYVTDINGQKIGDQATISYIKTTV 94
++DVFYV DI G +I ++ +I+ +
Sbjct: 923 RVVDVFYVKDIFGLQILNERRQQHIRNAL 951
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS- 62
+F KL P + + D AT + V +V+ G+ + + + + I A I++
Sbjct: 752 QFQKL---ETPLLIDLSPDQGRRATEMTVITVDDPGLFSRIAGAVAAVGVNIASARITTC 808
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGV------------ 110
G ++DVFY+ I+ Q + D A ++ I+ V A + MR + +
Sbjct: 809 SDGTVLDVFYLQTIDNQVVDDAALLTRIRDFVTKAA--VGKMRIADALSARWQQTPKRIR 866
Query: 111 ---VP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAA 158
VP SK ++ IE+ G D PG L +++ + L + S+ I T+ R
Sbjct: 867 RFPVPPRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQSSSISTYGERVVD 926
Query: 159 LLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+ +VKD G I +++R I+ L VL+ +
Sbjct: 927 VFYVKD-IFGLQILNERRQQHIRNALLAVLQAS 958
>gi|388602519|ref|ZP_10160915.1| PII uridylyl-transferase [Vibrio campbellii DS40M4]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V S ++ + V+ L N + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVGVVP--SKEY 116
D +G+ I G + ++ IKT N ++++ V +P SK+
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL++V DL ++ +A+I T RA L + ++ G E+Q+
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQT 858
Query: 177 LLKIK 181
L+ K
Sbjct: 859 ELREK 863
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
+VVIDN E +VI+V + + G L + Q + D L I KAYI+++ L+DVFYV
Sbjct: 562 ASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYV 621
Query: 74 TDINGQKIGDQ 84
D G+K+ D+
Sbjct: 622 LDSRGRKLVDE 632
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
I+ ++SE +E+Y D G L IT+ + ++GL I +A I+T ++ D F+V D+ G
Sbjct: 567 IDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLDSRG 626
Query: 377 NP-VDP----KIVDSIQHQIGR 393
VD ++ + H IGR
Sbjct: 627 RKLVDEDFRHEVTQGLLHSIGR 648
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
AKL + P V I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 906
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 907 APTRQAAIKRALVHLL-ANGD 926
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 30/203 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THNARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+ T + RA + +
Sbjct: 729 NVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I + + VL G LR P + R G + + +
Sbjct: 789 YDRDEDEG------RRATRIGETIEEVL--EGKLRLPEA--VARRATSGSKAKLRAFVVE 838
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ E +N N SDR YT + + DRP LL+ ++ + + V
Sbjct: 839 PEVE----INNN---------WSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 884
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 885 ATFGERARDVFYVTDLLGAQITA 907
>gi|350532167|ref|ZP_08911108.1| PII uridylyl-transferase [Vibrio rotiferianus DAT722]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I T + V S ++ + V+ L N + A I +S GY++D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 TDINGQKI--GDQATISY-------------IKTTVETNASFLNSMRSSVGVVP--SKEY 116
D +G+ I G + ++ IKT N ++++ V +P SK+
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL++V DL ++ +A+I T RA L + ++ G E+Q+
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSETGGRLSEEQQA 858
Query: 177 LLKIK 181
L+ K
Sbjct: 859 ELRDK 863
>gi|330445143|ref|ZP_08308795.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489334|dbj|GAA03292.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 873
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P +++ T + V S ++ + V+ L NL + A I +S GY +D F V
Sbjct: 681 PLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKDGYTLDTFMV 740
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMR---------------SSVGVVPSK--EY 116
D NG+ I + + I+ + + + S R + V +P+K +
Sbjct: 741 LDPNGKAINENRHTT-IRRALTKALTVMKSERKIRRAPRKLLHFNVPTEVSFLPTKTGKK 799
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +EL D PGLL++V +V + + S+ +A+I T RA + ++ E+Q+
Sbjct: 800 TMMELVALDMPGLLAKVGSVFAEHNVSLQAAKITTIGERAEDFFILVNEQGSHLTEEQQE 859
Query: 177 LLK 179
+LK
Sbjct: 860 ILK 862
>gi|418938172|ref|ZP_13491734.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
gi|375055173|gb|EHS51446.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
Length = 944
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I N + TVI+V+ ++R G L E+ L DL+L I A I++ G ++D FYV
Sbjct: 827 PDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVM 886
Query: 75 DINGQKIGDQ 84
D+ GQK+ ++
Sbjct: 887 DLVGQKVTNE 896
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
DR G L++IT L + L I A I+T G KV DTF+V D G V
Sbjct: 848 DRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVMDLVGQKV 893
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
AKL + P V I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 829 AKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 888
Query: 66 YLMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 889 RARDVFYVTDLLGAQI 904
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 847 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 905
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 906 APTRQAAIKRALVHLL-ANGD 925
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 729 NVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I +++ VL G LR P + R +G +L +
Sbjct: 789 YDRDEDEG------RRATRIGEMIEEVL--EGKLRLPEAV--ARRATNGRAKLRAFVV-- 836
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
P V+I + YT + + DRP LL+ ++ + + V
Sbjct: 837 -------------EPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 883
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 884 ATFGERARDVFYVTDLLGAQITA 906
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
R+ P P V I+N + TVI+V ++R G+L ++ + LNL I A++++ G
Sbjct: 845 RLKPFSVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 904
Query: 67 LMDVFYVTDINGQKI 81
DVFYVTD+ G +I
Sbjct: 905 ARDVFYVTDLLGAQI 919
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 862 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 920
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 921 APTRQAAIKRALIHLL-ANGD 940
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 30/202 (14%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA----ALLHV 162
+VG + T + + D P LLS ++ ++V A+I+T A A+
Sbjct: 745 NVGFDEGRGVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITRE 804
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRD 222
D+ ++ +R +I + VL G LR P M A R
Sbjct: 805 YDRDD----DEGRRATRIGDTIEQVL--EGKLRLPDM------------------MARRT 840
Query: 223 FERLDCVNYNSRPHVTILD-CSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVV 281
+ ++ P V+I + SDR YT + + DRP LLF ++ + + V
Sbjct: 841 ASKTRLKPFSVEPEVSINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVA 899
Query: 282 TGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 900 TFGERARDVFYVTDLLGAQITA 921
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V I+N + TVI+V ++R G+L ++ + LNL I A++++ G DVFYVT
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DINGQKI 81
D+ G +I
Sbjct: 897 DLLGAQI 903
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 93 TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
TVE + NS S YT IE++G DRPGLL +++ ++ L+ ++ SA + T
Sbjct: 834 TVEPEVAINNSW--------SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF 885
Query: 153 NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
RA + +V D G I R IK+ L ++L
Sbjct: 886 GERARDVFYVTDL-LGAQITAPTRQAAIKRALIHLL 920
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHV--- 162
+VG ++ T + + D P LLS ++ ++V A+I+T + RA + +
Sbjct: 728 NVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITRE 787
Query: 163 --KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
+D+ G +R +I ++ VL G LR P + + R +G+ +L
Sbjct: 788 YDRDEDEG------RRATRIGDMIEEVL--EGKLRLPD--VVARRATNGKGKLKP----- 832
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
+ P V I + YT + + DRP LL+ ++ + + V
Sbjct: 833 ----------FTVEPEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHV 882
Query: 281 VTGRMEAYQEYYIKHVDGFPISS 303
T A +Y+ + G I++
Sbjct: 883 ATFGERARDVFYVTDLLGAQITA 905
>gi|326386427|ref|ZP_08208050.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209088|gb|EGD59882.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 916
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ DN + TVI+V +++R +L + + L + L++ A+I++ G +D FYVT
Sbjct: 824 PIVIFDNKASDRFTVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVT 883
Query: 75 DINGQKIGDQATISYIK 91
DI G+KI ++ + I+
Sbjct: 884 DILGEKITSESRLRSIE 900
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 43/260 (16%)
Query: 78 GQKIGDQATISYIKTTVETNASFLN-----SMRSSVGVVPSKEYTSIELTGTDRPGLLSE 132
G+++GD I+ + + N L+ + P++ T + + D PGL
Sbjct: 682 GRQLGDSYWIAEPEDIIAMNLQQLDMALDEPLSVEARYYPARGATLVTVIAADHPGLFYR 741
Query: 133 VSAVLTDLSCSVVSAEIWTHNARAAALLH---VKDQSSGCAIEDQKRLLKIKKLLCNVLR 189
++ + +++ A I H RA L V+D G + ++ ++ ++K + + L
Sbjct: 742 IAGGIHLAGGNIIDARI--HTTRAGVALDNFLVQD-PLGRPLNEENQIKRLKVAIADALA 798
Query: 190 TNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILD--CSDRDY 247
L Q A R R + P + I D SDR +
Sbjct: 799 NKVKL--------------------QPQLAARPLARPRAEAFEIHP-IVIFDNKASDR-F 836
Query: 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAER 307
T + + + DRP LL L + + +VY + T A +Y+ + G I+SE+
Sbjct: 837 TVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVTDILGEKITSESRL 896
Query: 308 QRVMACLEAAIERRASEGLE 327
+ +IERR EG +
Sbjct: 897 R--------SIERRLIEGAQ 908
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 25/183 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQ--FLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT++ V + + G+ + L N++ + + ++ G +D F V D G+ + ++
Sbjct: 725 ATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIH-TTRAGVALDNFLVQDPLGRPLNEE 783
Query: 85 ATISYIKTTVETNASFLNSMRSSVGVVP---------------------SKEYTSIELTG 123
I +K + + ++ + P S +T IE+
Sbjct: 784 NQIKRLKVAIADALANKVKLQPQLAARPLARPRAEAFEIHPIVIFDNKASDRFTVIEVGA 843
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRP LLS ++ L + V SA I T+ RA +V D G I + RL I++
Sbjct: 844 LDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVTD-ILGEKITSESRLRSIERR 902
Query: 184 LCN 186
L
Sbjct: 903 LIE 905
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR LLS + R L E L + A I+T G + DTF+VTD G +
Sbjct: 839 IEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVTDILGEKI 890
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V++ N E+ TV++V ++R G+L ++ + LNL I A++ + G +DVFYVTD+
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 NGQK---IGDQATI 87
GQK +G Q +I
Sbjct: 899 TGQKVHNVGRQESI 912
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT +E+TG DRPGLLS+++ ++ L+ ++ SA + T +A + +V D +G +
Sbjct: 846 SENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TGQKVH 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGE 210
+ R I+ L N + P S + L G+
Sbjct: 905 NVGRQESIRDRLKNAFDGKKPQKAPMSSRRRPQKLTGK 942
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR GLLSD+T + L I A + T G K D F+VTD +G V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV-------- 903
Query: 388 QHQIGR 393
H +GR
Sbjct: 904 -HNVGR 908
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTPPKL 408
+Q + + Q G P ++
Sbjct: 877 LQAALVEQLSQDNGRDTLPTRI 898
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKA-YISSDGGYLMDVFYVTDINGQKIGD 83
E + I + + ++H + + LNL I A I+S + +D + V D +G IG+
Sbjct: 702 ESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGN 761
Query: 84 ---------QATISYIK------TTVETNAS-----FLNSMRSSVGVVPSKEYTSIELTG 123
+ I +K T ++ F + + ++ ++ + +E+
Sbjct: 762 NPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIA 821
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
DRPGLL+ + + D SV +A+I T R + ++ D
Sbjct: 822 PDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V++ N E+ TV++V ++R G+L ++ + LNL I A++ + G +DVFYVTD+
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 NGQK---IGDQATI 87
GQK +G Q +I
Sbjct: 899 TGQKVHNVGRQESI 912
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT +E+TG DRPGLLS+++ ++ L+ ++ SA + T +A + +V D +G +
Sbjct: 846 SENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TGQKVH 904
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGE 210
+ R I+ L N + P S + L G+
Sbjct: 905 NVGRQESIRDRLKNAFDGKKPQKAPMSSRRRPQKLTGK 942
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR GLLSD+T + L I A + T G K D F+VTD +G V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV-------- 903
Query: 388 QHQIGR 393
H +GR
Sbjct: 904 -HNVGR 908
>gi|343505423|ref|ZP_08742995.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342807721|gb|EGU42901.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 874
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 6 AKLIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
+ L+R +P P V+I T + V ++ + V+ L N + A + +S
Sbjct: 668 SHLLRHDDPTKPLVLISEKATRGGTEVFVYHKDQRALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIG---DQATISYI--------KTTVETNASFLN----SMRSS 107
GY++D F V D +G I +A I ++ T + T + N +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +PSK + T++E D PGLL+ V A DL ++ +A+I T RA L +
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLHINLHAAKITTIGERAEDLFIITGA 847
Query: 166 SSGCAIEDQKRLLKIKKLLC 185
G E +++ ++++ LC
Sbjct: 848 EGGKLSEQEEQ--QLREALC 865
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P + I+N+ + TVI+V ++R G+L ++ + LNL I A++++ G DVFYVT
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 75 DINGQKI 81
D+ G +I
Sbjct: 899 DLLGAQI 905
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S YT IE++G DRPGLL +++ ++ L+ ++ SA + T RA + +V D G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQIT 906
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L NGD
Sbjct: 907 APTRQAAIKRALVHLL-ANGD 926
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 31/208 (14%)
Query: 102 NSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THNARAAALL 160
N + +VG ++ T + + D P LLS ++ ++V A+I+ T + RA +
Sbjct: 725 NKLAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTI 784
Query: 161 HV-----KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQ 215
+ +D+ G +R +I +++ VL G LR P + R + +L
Sbjct: 785 SIRREYDRDEDEG------RRATRIGEIIEEVL--EGKLRLPEA--VARRATSSKTKLRA 834
Query: 216 MLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVV 275
+ P ++I + YT + + DRP LL+ ++ + +
Sbjct: 835 FVV---------------EPEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNI 879
Query: 276 YHGTVVTGRMEAYQEYYIKHVDGFPISS 303
V T A +Y+ + G I++
Sbjct: 880 ASAHVATFGERARDVFYVTDLLGAQITA 907
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T +D PGL S ++ L + +VV A +T + A A V+D + G
Sbjct: 721 PDRDATRASFAMSDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQD-ADGRP 779
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E RL ++++++ + NG++ ++ ER
Sbjct: 780 FE-AARLPRLRQMIDRTM--NGEVVPREAMKERDKIKKRERAF----------------- 819
Query: 231 YNSRPHVTILDCSDRD-YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P + D D YT + + ++DRP LL D V L + + T +A
Sbjct: 820 --TVPTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVD 877
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRA 322
+Y+K + G +E RQ++ A L AI++ A
Sbjct: 878 TFYVKDMFGLKFHAEGRRQQLEAKLREAIKQGA 910
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++++ L N I A I++ G +D FYV
Sbjct: 822 PTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYV 881
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 882 KDMFGLKF 889
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V DND TVI+V + +R +L + + L + + +I A+I+ G D FYVT
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G KI D + ++ + AS
Sbjct: 888 DLTGDKITDPGRLEALRAALSDAAS 912
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 27 ATVIQVDSVNRHGILLEVIQ--FLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT++ V + + GI + + LV N++ + + + G Y +D F V D G+ G+
Sbjct: 729 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTG-YAVDNFLVQDPLGRPFGED 787
Query: 85 ATISYIKTTVETNASFLNSMRSSVGVVP---------------------------SKEYT 117
++ I+ ++ + + V +VP S +T
Sbjct: 788 DQLARIERSIA------DGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFT 841
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
IE+ DRP LL+ ++ L + + SA I + RAA +V D +G I D RL
Sbjct: 842 VIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTDL-TGDKITDPGRL 900
Query: 178 LKIKKLLCNV 187
++ L +
Sbjct: 901 EALRAALSDA 910
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR LL+ + R L E IR A I+ G + DTF+VTD +G+ + DP +++
Sbjct: 843 IEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTDLTGDKITDPGRLEA 902
Query: 387 IQ 388
++
Sbjct: 903 LR 904
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
A+E LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+TD +G P+
Sbjct: 848 ANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGAPL 905
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 20/142 (14%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATIS---------------YIKTTV 94
L L I A I+ S + ++ F V D +G I D A + Y +
Sbjct: 766 LGLSIHDARIATSSNNWTLNTFIVLDDHGHAIRDPARLEEIRHHLVEELDDPDDYPQIVT 825
Query: 95 ETNASFLNSMRSSVGVV----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
L R V P+ E T +EL DRPGLL+ V + + ++ +A+I
Sbjct: 826 RHTPRQLKHFRVPTEVFIRQDPANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIA 885
Query: 151 THNARAAALLHVKDQSSGCAIE 172
T R + + D++ I+
Sbjct: 886 TLGERVEDVFFITDKAGAPLID 907
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+I+N ATV+ V + G LL+ L L L I +A +S ++ FY+T
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 75 DI-NGQKIGDQATISYIKTTVETN--------------------------------ASFL 101
D +KI T+ I+ T+ N A
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 102 NSMRSSVGV--VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAAL 159
++++SV V + + +T TDRPGLL ++ A L DLS +V+SAEI T +A +
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 160 LHVKDQSSGC 169
++V Q
Sbjct: 233 VYVTYQGGAL 242
>gi|168031081|ref|XP_001768050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680688|gb|EDQ67122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+ID + AT++++ +R G LL+ I+ L DL L + + ++++G L F V
Sbjct: 7 PIVLIDQESDAEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGPNLRRKKFLV 66
Query: 74 TDI-NGQKIGDQATISYIKTTVETNASFLN-------SMRSSVGVVPSKEYTSIELT--- 122
T + N +K+ D + I+ T+ N + +M + G P K+ +++
Sbjct: 67 TRLDNNKKVEDPELLEAIRLTIINNLLQYHPESGEQLAMGVAFGENPPKKEIDVDVATHV 126
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH 161
DRPGLL E+ V+ D+S V SAEI T A LH
Sbjct: 127 TVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDTE----ADFLH 175
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 14/76 (18%)
Query: 13 NPPRVVIDNDVCEHATV--------IQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
NPP+ ID DV H TV + V++ +R G+LLE+++ + D+++ + A I ++
Sbjct: 112 NPPKKEIDVDVATHVTVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDTEA 171
Query: 65 GYL------MDVFYVT 74
+L D FYVT
Sbjct: 172 DFLHFGLVAKDKFYVT 187
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVE-TNASFLNSMR--------------SSVG 109
GY++D F V D NG I +++ S IK + + N ++ + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K + T +E D PGLL+ V A DL+ ++ A+I T RA L +
Sbjct: 790 FLPTKSNKRTLMEFVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GCAIEDQK 175
G E+++
Sbjct: 850 GKLSEEEE 857
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV+IDN TV++V+ + G+L + + L + + I A IS+ G +DVFY+
Sbjct: 852 PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYL 911
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K+ ++ + I+
Sbjct: 912 KDVFGLKVDSKSKLEDIR 929
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA-- 170
++ T + + TD PGL S +S + +VV A I+T S+G A
Sbjct: 750 ARAVTEVTVYATDHPGLFSRISGAMAATGANVVDARIFT-------------LSNGMALD 796
Query: 171 ---IEDQKRLL-----KIKKLLCNVLRT-NGDLRTPSMSISSARVLHGERRLHQMLFADR 221
I+D+ RL +I KL+ + R +G LR + L G R ++
Sbjct: 797 TFLIQDEDRLAFDRPDRIAKLVSAIERALSGALRVDKALEARKPTLGGRTRALKI----- 851
Query: 222 DFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVV 281
P V I + + +T V + +D P +L+ L + ++ ++
Sbjct: 852 ------------PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASIS 899
Query: 282 TGRMEAYQEYYIKHVDGFPISSEAE----RQRVMACLEAAIERRAS 323
T +Y+K V G + S+++ R+ +M L AA ++A+
Sbjct: 900 TYGERFVDVFYLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGD-Q 84
AT I V S N+ + + L LNL I A I SS GY +D F+V + NG+ +G+ Q
Sbjct: 740 ATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDTFFVLNENGEPLGNNQ 799
Query: 85 ATISYIKTTVETNASFLNSMRSSVG----------VVPSKEYTS---------IELTGTD 125
+ I+ + S +++ R +G P++ S +E+ D
Sbjct: 800 TLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLSTDTIRNCSVLEVISPD 859
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
RPGLL+ + + D +++A+I T R + + D
Sbjct: 860 RPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIAD 898
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I RI +Y + + A+I+T+G +V+D FF+ D G P+ D + +
Sbjct: 853 LEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADNDGKPLGDVALCEK 912
Query: 387 IQHQI 391
+Q +I
Sbjct: 913 LQQEI 917
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
+P R + D + +V++V S +R G+L + + +D ++ + A I++ G + D+F+
Sbjct: 836 SPTRTSLSTDTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFF 895
Query: 73 VTDINGQKIGDQA 85
+ D +G+ +GD A
Sbjct: 896 IADNDGKPLGDVA 908
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P + DND E T+I+VD+ +R G+L ++ + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 62 SDGGYLMDVFYVTDINGQKIGDQA 85
+ G ++D FYV D+ G K +A
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEA 911
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D S G E +RL ++++
Sbjct: 751 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPYE-AERLPRLRE 808
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ LR G++ T S ++ ER +N H+T +
Sbjct: 809 MIHKTLR--GEVITGEALKSRDKIKKRER------------------AFNVPTHITFDND 848
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 849 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 908
Query: 303 SEAERQRVMACLEAAI 318
SEA+++ + A L +AI
Sbjct: 909 SEAKQKSLEAKLRSAI 924
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D F+V D G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-D 380
A+E LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+T +G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIVDSIQHQIGRTILQVKG 400
P+ Q Q+ +++V G
Sbjct: 875 PE----RQQQLRERLIEVLG 890
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 21/187 (11%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDGGYLMDVFYVTDINGQK 80
D+ E T + + + + + + L L I A I+ S + ++ F V D GQ
Sbjct: 704 DMAEGGTKVFIHTRSVDDLFAATAAAMEQLGLSIHDARIATSHNDWTLNTFIVLDHYGQP 763
Query: 81 IGDQATIS---------------YIKTTVETNASFLNSMRSSVGVV----PSKEYTSIEL 121
I D I Y + L + VV P+ E T +EL
Sbjct: 764 IRDPEHIEEMRRHLVEELDDPDDYPEIVTRHTPRQLKHFKVPTEVVIEQDPANERTLLEL 823
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
T DRPGLL+ V + + ++ +A+I T R + + + +G + D +R +++
Sbjct: 824 TAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTK-AGEPLTDPERQQQLR 882
Query: 182 KLLCNVL 188
+ L VL
Sbjct: 883 ERLIEVL 889
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P VVI+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVVIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
T G+ + D
Sbjct: 865 TTKAGEPLTD 874
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
N RVV+DN ++ TV++V S + G L + Q L D + I +A+I+++ L+DVFY
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V D +KI + A I ++ V
Sbjct: 824 VLDSQQEKIVEPAFIKELRDGV 845
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP-VDPKIV-- 384
+E+Y+DD G L IT+ L ++G+ I RA I+T ++ D F+V D+ V+P +
Sbjct: 781 VEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYVLDSQQEKIVEPAFIKE 840
Query: 385 --DSIQHQIG 392
D + + IG
Sbjct: 841 LRDGVLYAIG 850
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P + DND E T+I+VD+ +R G+L ++ + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 62 SDGGYLMDVFYVTDINGQKIGDQA 85
+ G ++D FYV D+ G K +A
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEA 911
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D S G E +RL ++++
Sbjct: 751 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPYE-AERLPRLRE 808
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G++ T S ++ ER +N H+T +
Sbjct: 809 MIHKTLK--GEVITGEALKSRDKIKKRER------------------AFNVPTHITFDND 848
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 849 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 908
Query: 303 SEAERQRVMACLEAAI 318
SEA+++ + A L +AI
Sbjct: 909 SEAKQKSLEAKLRSAI 924
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D F+V D G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLV--DLNLVITKAYISSDGGYLMDVFYVT 74
V + D AT + V + +RH + ++ L N+V + +SDG DVFYV
Sbjct: 720 VGVRTDKRRSATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDG-RAFDVFYVQ 778
Query: 75 DINGQKIG--DQATISYIKTTVETNAS----------FLNSMR---SSVGVVPS------ 113
+ G+ G D ++ V++ A L +R ++ V PS
Sbjct: 779 EQGGKPFGWSDSYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLE 838
Query: 114 --KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
+ IE TG DRPGLL ++ L+D+ S+ +A I + RA +V + +G
Sbjct: 839 ASDDALVIEATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVTE--NGHKP 896
Query: 172 EDQKRLLKIKKLLCNVL 188
RL IK L NVL
Sbjct: 897 SGDARLAGIKVHLMNVL 913
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V +D + + A VI+ +R G+L + + L D+ L + A I G +D FYVT
Sbjct: 831 PSVNLDLEASDDALVIEATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVT 890
Query: 75 DINGQKIGDQATISYIK 91
+ NG K A ++ IK
Sbjct: 891 E-NGHKPSGDARLAGIK 906
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 35/169 (20%)
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLT-DMQYVVYHGTVVTGRMEAYQEYYIKHVDGFP--- 300
R T V + + DR L D L+ + VV T A+ +Y++ G P
Sbjct: 728 RSATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDGRAFDVFYVQEQGGKPFGW 787
Query: 301 ------------ISSEAERQ----------RVMACLEAAIERRASEGLELELYTD----- 333
+ S AE + + EAA S L+LE D
Sbjct: 788 SDSYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLEASDDALVIE 847
Query: 334 ----DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
DR GLL + + L + GL + A I G + DTF+VT+ P
Sbjct: 848 ATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVTENGHKP 896
>gi|303252229|ref|ZP_07338397.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247572|ref|ZP_07529616.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649012|gb|EFL79200.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855937|gb|EFM88096.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 850
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + V +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|378697957|ref|YP_005179915.1| uridylyltransferase [Haemophilus influenzae 10810]
gi|301170473|emb|CBW30080.1| uridylyltransferase [Haemophilus influenzae 10810]
Length = 863
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 38/156 (24%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
A + ++ G A++ Q+R ++L NVL N
Sbjct: 832 AEDFFILTNR-FGQALDSQQR-----EILRNVLYRN 861
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNRFG- 843
Query: 378 PVDPKIVDSIQHQIGRTIL 396
+ +DS Q +I R +L
Sbjct: 844 ----QALDSQQREILRNVL 858
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 36/176 (20%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN ATV+ ++ +R G LL+ I L +L L I +A I + G + FY+T
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYIT 134
Query: 75 D-INGQKIGDQATISYIKTTVETN-ASFLNSMRSSVGVVPS------------------- 113
D + +KI A + I+ T+ N + +++G S
Sbjct: 135 DALTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTP 194
Query: 114 KEYTSIEL----TGT---------DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARA 156
K TS+E+ +GT DRPGLL+++ L D+S +V+SAE+ T A
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVA 250
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIV 384
++ + T DR GLL+DI L++ + + AE+ T G KD F+VT G P++P +
Sbjct: 212 KVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEFYVT-YHGEPLNPSMA 268
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P + DND E T+I+VD+ +R G+L ++ + L N+ I A I+
Sbjct: 837 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 896
Query: 62 SDGGYLMDVFYVTDINGQKIGDQA 85
+ G ++D FYV D+ G K +A
Sbjct: 897 TYGEQVVDAFYVKDMFGLKYYSEA 920
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D + G E RL ++ +
Sbjct: 760 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-TEGHPYE-ADRLPRLSQ 817
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ V+ GE RD + +N H+T +
Sbjct: 818 MIHKTLK--------------GEVIAGE------ALKSRDKIKKRERAFNVPTHITFDND 857
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 858 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 917
Query: 303 SEAERQRVMACLEAAI 318
SEA+++ + A L +AI
Sbjct: 918 SEAKQKSLEAKLRSAI 933
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 45/197 (22%)
Query: 4 EFAKLIR----RMNPPRVVI--DNDVCEHATVIQVDSVNRHGILLEVIQFL--VDLNLVI 55
+FA+++R R NP V+I D AT + GI + L V N+V
Sbjct: 723 DFAEMLRELTERDNPAEVIIRLHPDEDRDATRACFCMADHPGIFARIAGALALVGANVVD 782
Query: 56 TKAYISSDGGYLMDVFYVTD---------------------INGQKIGDQATISYIKT-- 92
++Y + DG Y+ D F++ D + G+ I +A S K
Sbjct: 783 ARSYTTKDG-YVTDAFWIQDTEGHPYEADRLPRLSQMIHKTLKGEVIAGEALKSRDKIKK 841
Query: 93 -----TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
V T+ +F N S+ YT IE+ DRPGLL +++ L + + +A
Sbjct: 842 RERAFNVPTHITFDND--------GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANA 893
Query: 148 EIWTHNARAAALLHVKD 164
I T+ + +VKD
Sbjct: 894 VIATYGEQVVDAFYVKD 910
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D F+V D G
Sbjct: 865 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 913
>gi|404254714|ref|ZP_10958682.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26621]
Length = 914
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L ++ L + I A++++ G +D FY+T
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 881
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G+KIG + + I+ + + A+
Sbjct: 882 DLTGEKIGAGSRLRTIERRLLSAAA 906
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 26/197 (13%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH---VKDQS 166
V P + T + + D PGL ++ ++ +++ A I H R L V+D
Sbjct: 717 VYPERGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARI--HTTRDGMALDNFLVQD-P 773
Query: 167 SGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL 226
G ++ +LL++KK + + L + RV +R L + L R
Sbjct: 774 VGRPFDEDGQLLRLKKAIEDAL--------------ANRVKLVDRLLAKPL------PRT 813
Query: 227 DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
+ P+V I + + +T + + ++DRP LL L + ++ V T
Sbjct: 814 RAEAFPIAPNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGER 873
Query: 287 AYQEYYIKHVDGFPISS 303
A +Y+ + G I +
Sbjct: 874 AVDTFYLTDLTGEKIGA 890
>gi|395491855|ref|ZP_10423434.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26617]
Length = 914
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L ++ L + I A++++ G +D FY+T
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 881
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G+KIG + + I+ + + A+
Sbjct: 882 DLTGEKIGAGSRLRTIERRLLSAAA 906
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 26/197 (13%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH---VKDQS 166
V P + T + + D PGL ++ ++ +++ A I H R L V+D
Sbjct: 717 VYPERGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARI--HTTRDGMALDNFLVQD-P 773
Query: 167 SGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL 226
G ++ +L+++KK + + L + RV +R L + L R
Sbjct: 774 VGRPFDEDGQLVRLKKAIEDAL--------------ANRVKLVDRLLAKPL------PRT 813
Query: 227 DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
+ P+V I + + +T + + ++DRP LL L + ++ V T
Sbjct: 814 RAEAFPIAPNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGER 873
Query: 287 AYQEYYIKHVDGFPISS 303
A +Y+ + G I +
Sbjct: 874 AVDTFYLTDLTGEKIGA 890
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 277 HGTVV--TGRMEAYQEYYIKHVDG---FP--ISSEAERQ--RVMACLEAAIER-RASEGL 326
HG + G +E +++ ++ +D +P ++ RQ E IE+ A+E
Sbjct: 760 HGQPIRDPGHIEEMRQHLVEELDDPDDYPDIVTRHTPRQLKHFKVPTEVLIEQDPANERT 819
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVD 385
LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+T +G P+ DP+
Sbjct: 820 LLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTDPE--- 876
Query: 386 SIQHQIGRTILQVKG 400
Q Q+ +++V G
Sbjct: 877 -RQQQLRERLIEVLG 890
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATIS---------------YIKTTV 94
L L I A I+ S + ++ F V D +GQ I D I Y
Sbjct: 733 LGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYPDIVT 792
Query: 95 ETNASFLNSMRSSVGVV----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
L + V+ P+ E T +ELT DRPGLL+ V + + S+ +A+I
Sbjct: 793 RHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIA 852
Query: 151 THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
T R + + + +G + D +R ++++ L VL
Sbjct: 853 TLGERVEDVFFITTK-AGEPLTDPERQQQLRERLIEVL 889
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V+I+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
T G+ + D
Sbjct: 865 TTKAGEPLTD 874
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-D 380
A+E LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+T +G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIVDSIQHQIGRTILQVKG 400
P+ Q Q+ +++V G
Sbjct: 875 PE----RQQQLRERLIEVLG 890
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 21/187 (11%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDGGYLMDVFYVTDINGQK 80
D+ E T + + + + + + L L I A I+ S + ++ F V D +GQ
Sbjct: 704 DMAEGGTKVFIHTRSVDDLFAATAAAMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQP 763
Query: 81 IGDQATIS---------------YIKTTVETNASFLNSMRSSVGVV----PSKEYTSIEL 121
I D I Y L + V+ P+ E T +EL
Sbjct: 764 IRDPNHIEEMRQHLVEELDDPDDYPTIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLEL 823
Query: 122 TGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
T DRPGLL+ V + + S+ +A+I T R + + + +G + D +R +++
Sbjct: 824 TAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTK-AGEPLTDPERQQQLR 882
Query: 182 KLLCNVL 188
+ L VL
Sbjct: 883 ERLIEVL 889
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V+I+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
T G+ + D
Sbjct: 865 TTKAGEPLTD 874
>gi|261253730|ref|ZP_05946303.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954531|ref|ZP_12597565.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937121|gb|EEX93110.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815251|gb|EGU50175.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 873
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V ++H + V+ L N + A + +S GY++D F V
Sbjct: 679 PLILISKKATRGGTEVFVYCKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVP--SKEY 116
D NG I + + K T ++ + N ++++V +P SK+
Sbjct: 739 LDQNGDAIDESRHKAVTKHLAHVLADGRPTKIKRRRTPRNLQHFKVKTTVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A D + +A+I T RA L + S G E+++
Sbjct: 799 TLLEFVALDTPGLLATVGATFADQGVHLHAAKITTIGERAEDLFIITSPSGGKLTEEEQA 858
Query: 177 LLKIKKLLCNV 187
L+ +KL N+
Sbjct: 859 ELR-EKLRQNI 868
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+++++ DR G L ITR + E GL I A+IST G + D+F+V + SG + P I
Sbjct: 785 IDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIVDSFYVLNQSGKKISPSDQAFI 844
Query: 388 QHQIGRTILQV 398
+ ++ TI Q+
Sbjct: 845 KEELINTIEQI 855
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 7 KLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGY 66
KL +R +V DN E T+I V S +R G L + + + +L LVI A IS+ G
Sbjct: 764 KLFKRSGQVKVSFDN--HERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDD 821
Query: 67 LMDVFYVTDINGQKI--GDQATI 87
++D FYV + +G+KI DQA I
Sbjct: 822 IVDSFYVLNQSGKKISPSDQAFI 844
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V++DN+ E +TV++ +R G+L + + + D L I A+I G +D FYV
Sbjct: 831 PAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVV 890
Query: 75 DINGQKIGD 83
D +G+K+ D
Sbjct: 891 DADGRKLTD 899
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 46 QFLVDLNLVITKA--------YISSDGGYLMDVFYVTDINGQKIG--DQATISYIKTTVE 95
+ VDL IT A +S G +DVFYV D +GQ G D ++ + T+
Sbjct: 744 RLFVDLAEAITAAGANVMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAETLA 803
Query: 96 TNASFLNSMR-----------SSVGVVP--------SKEYTSIELTGTDRPGLLSEVSAV 136
A R ++ + P S+ T +E +G DRPGLL+ ++
Sbjct: 804 CAARGEPVAREPRKPQDLGRTAAFAITPAVMLDNEASETSTVVEASGRDRPGLLAALART 863
Query: 137 LTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
++D S++SA I + RA +V D + +KR
Sbjct: 864 ISDAGLSILSAHIDGYGERAVDAFYVVDADGRKLTDARKR 903
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 33/154 (21%)
Query: 256 DRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYIKHVDGFPISSEAERQ-----R 309
DRP+L D +T V V T R +A +Y++ G P S R
Sbjct: 741 DRPRLFVDLAEAITAAGANVMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAE 800
Query: 310 VMACLE----AAIERRASEGLE-----------------------LELYTDDRFGLLSDI 342
+AC A E R + L +E DR GLL+ +
Sbjct: 801 TLACAARGEPVAREPRKPQDLGRTAAFAITPAVMLDNEASETSTVVEASGRDRPGLLAAL 860
Query: 343 TRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
R + + GL I A I G + D F+V DA G
Sbjct: 861 ARTISDAGLSILSAHIDGYGERAVDAFYVVDADG 894
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VV+DN+ ATV++ +R G+L + + L D L I A+I G +D FYV
Sbjct: 856 PTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 915
Query: 75 DINGQKIGDQATISYIK----TTVETNASFLNSMRSSV 108
G K+ D ++ +K +E N + S R +
Sbjct: 916 TSEGGKLADVRKVTTLKADLLAALEQNEAGAPSTRPGL 953
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 26 HATVIQVDSVNRHGILLEVIQFLVDL--NLVITKAYISSDGGYLMDVFYVTDINGQKIG- 82
+A I V + +R G+ ++ + L N+V + + S G L DVF+V D+ G +G
Sbjct: 756 NAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQAL-DVFHVQDVTGAPLGC 814
Query: 83 ------------DQATISYIKTTVETNASFLNSMRSSVGVVP--------SKEYTSIELT 122
+A +E S ++ + P S E T +E +
Sbjct: 815 ENPRALRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEAS 874
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
G DRPGLL ++ L D S+ SA I + RA +V+ S G + D +++ +K
Sbjct: 875 GRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ-TSEGGKLADVRKVTTLKA 933
Query: 183 LLCNVLRTN 191
L L N
Sbjct: 934 DLLAALEQN 942
>gi|303251535|ref|ZP_07337709.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252152|ref|ZP_07534051.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649533|gb|EFL79715.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860452|gb|EFM92466.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 850
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + V +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 829 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 74 TDINGQKIGDQATISYIKTTVETNAS 99
D+ G K +A ++ + T S
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAIS 914
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + A A ++D + G E +RL +++
Sbjct: 740 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQD-AEGSPYE-AERLQRLRD 797
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ GD+ S ++ ER + H+T +
Sbjct: 798 MIRKTLK--GDVVAGEAIRSRDKLKKRER------------------AFKVPTHITFDNE 837
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 838 GSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFGLKFH 897
Query: 303 SEAERQRVMACLEAAIERRASEG 325
SEA+++ + L AI SEG
Sbjct: 898 SEAKQKALEKKLRTAI----SEG 916
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 845 IEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFG 893
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-D 380
A+E LEL DR GLL+ + RI E + + A+I+T+G +V+D FF+T +G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIVDSIQHQIGRTILQVKG 400
P+ Q Q+ +++V G
Sbjct: 875 PE----RQQQLRERLIEVLG 890
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATIS---------------YIKTTV 94
L L I A I+ S + ++ F V D +GQ I D I Y
Sbjct: 733 LGLSIHDARIATSHNDWTLNTFIVLDNHGQPIRDPGHIEEMRRHLVEELDDPDDYPDIVT 792
Query: 95 ETNASFLNSMRSSVGVV----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
L + V+ P+ E T +ELT DRPGLL+ V + + S+ +A+I
Sbjct: 793 RHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIA 852
Query: 151 THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
T R + + + +G + D +R ++++ L VL
Sbjct: 853 TLGERVEDVFFITTK-AGEPLTDPERQQQLRERLIEVL 889
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V+I+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
T G+ + D
Sbjct: 865 TTKAGEPLTD 874
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
+ PPRV + +D ATV++V + +R G+L + + D L + A + + G +DVF
Sbjct: 674 VAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVF 733
Query: 72 YVTDINGQKIGDQATISYIKTTV 94
YV D G+ + D+A + ++ V
Sbjct: 734 YVVDRAGRPLTDEAQRAQVRDQV 756
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P VT++D + T V +R+ DRP LL+ D V V T EA +Y+
Sbjct: 677 PRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVFYVV 736
Query: 295 HVDGFPISSEAERQRVMACLEAAI 318
G P++ EA+R +V + AA+
Sbjct: 737 DRAGRPLTDEAQRAQVRDQVLAAL 760
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL I R + GL +R A + T+G + D F+V D +G P+
Sbjct: 692 VEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVFYVVDRAGRPL 743
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ V+T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG I R +++ L A I+RR L+
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ I I E+ L ++ A+I+T+G +V+D FF+TDA+ + +
Sbjct: 809 DAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANNHQL 868
Query: 380 -DPKIVDSIQHQI 391
DP + +Q I
Sbjct: 869 SDPLLCSRLQDAI 881
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D + +I+R P P+V I ND TV+++ + +R G+L + ++ +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
+ A I++ G + DVF++TD N ++ D S ++ +
Sbjct: 841 SLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSRLQDAI 881
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN + T+I+VD+ +RH +L ++ + L + N+ I A I++ G +DVFYV
Sbjct: 838 PTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYV 897
Query: 74 TDINGQKIGDQATISYIKTTVE 95
D+ G KI + IK ++
Sbjct: 898 KDMIGLKITSENKQQIIKGKLQ 919
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 104 MRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHV 162
+ S V ++ T + D PG+ S ++ + + +V+ A +T + A + +
Sbjct: 729 IESHFEVDQDRDATRAQFVMQDHPGIFSRLTGAIALANANVIDARTYTTSDGYATPVFWI 788
Query: 163 KDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRD 222
+D D +L K+KKL+ L GD+ + + R + R
Sbjct: 789 QDNDGKPF--DFSKLGKLKKLIDQTLA--GDV--IARDVLKVRNKYKPR----------- 831
Query: 223 FERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT 282
ER N+ +T + YT + + ++DR LLFD L + + + T
Sbjct: 832 -ER----NFKVPTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIAT 886
Query: 283 GRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319
+A +Y+K + G I+SE ++Q + L+ AIE
Sbjct: 887 YGAQAVDVFYVKDMIGLKITSENKQQIIKGKLQEAIE 923
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 821 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYV 880
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K+ +A ++T +
Sbjct: 881 KDMFGLKLHTKAKQEALETKL 901
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+ S ++ L + ++V A +T + A A+ V+D S G E RL +++ +
Sbjct: 733 DHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQD-SEGRPYE-VARLPRLRGM 790
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ L+ G++ L + ADRD + + H+T +
Sbjct: 791 IDKTLK--GEV------------------LPREALADRDKVKKREREFRFPTHITFDNEG 830
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
YT + + ++DRP LL+D L + + T + +Y+K + G + +
Sbjct: 831 SEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFGLKLHT 890
Query: 304 EAERQRVMACLEAAIERRASEGLE 327
+A+++ LE + + +EG E
Sbjct: 891 KAKQE----ALETKLRQAIAEGAE 910
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFG 885
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V +DN + TV++V ++R G+L ++ + +L+L I A+I++ G DVFYV+
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 75 DINGQKI 81
D G KI
Sbjct: 900 DNEGTKI 906
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T +E++G DRPGLL +++ +++L ++ SA I T +AA + +V D + G I
Sbjct: 849 SNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSD-NEGTKIT 907
Query: 173 DQKRLLKIKKLLCNVL 188
+ R +++ + ++
Sbjct: 908 EPVRQEAVRRKILHIF 923
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDSIQHQIG 392
DR GLL D+T + E L I A I+T G K D F+V+D G + +P ++++ +I
Sbjct: 861 DRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNEGTKITEPVRQEAVRRKIL 920
Query: 393 RTILQVKGNLNTPPK 407
Q KG + PK
Sbjct: 921 HIFDQPKG--ESAPK 933
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 88/226 (38%), Gaps = 30/226 (13%)
Query: 97 NASFLN----SMRSSV---GVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
+A LN MR+ V + P + T + + D P LLS ++ S ++V A++
Sbjct: 714 HAKLLNMTEVEMRAPVTHIDIEPLRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQV 773
Query: 150 WTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHG 209
+T AL + ED+ R R ++ + L G
Sbjct: 774 FT-TTDGMALDTIVVSREFDFDEDELR------------------RASRIAFAVENALAG 814
Query: 210 ERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLT 269
E L M+ A + P VT+ + +T V + DRP LLFD ++
Sbjct: 815 EITLTDMVAARVGSAGARQKTFKVHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAIS 874
Query: 270 DMQYVVYHGTVVTGRMEAYQEYYIKHVDGF----PISSEAERQRVM 311
++ + + T +A +Y+ +G P+ EA R++++
Sbjct: 875 ELDLNIGSAHIATFGEKAADVFYVSDNEGTKITEPVRQEAVRRKIL 920
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
RV + ND E TV++V + ++ G+L ++ + L L L I A I+++ ++DVFYV+D
Sbjct: 815 RVFVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSD 874
Query: 76 INGQKIGDQATISYIKTTV 94
+ G K+ + I IK V
Sbjct: 875 LKGNKVLSEERIEGIKEQV 893
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E++T D+ GLL D+TR+L GL I A I+T +V D F+V+D GN V + ++
Sbjct: 829 VEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLKGNKVLSEERIEG 888
Query: 387 IQHQIG 392
I+ Q+G
Sbjct: 889 IKEQVG 894
>gi|296122522|ref|YP_003630300.1| protein-P-II uridylyltransferase [Planctomyces limnophilus DSM
3776]
gi|296014862|gb|ADG68101.1| protein-P-II uridylyltransferase [Planctomyces limnophilus DSM
3776]
Length = 895
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V+IDN+ E T++ + + +R G+L + + L +L L I A IS+ ++DVFY+
Sbjct: 805 PEQVLIDNESSERCTIVDIFAHDRPGLLYSISRQLFELELSIVLAKISTHLDQVVDVFYI 864
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLN 102
TD QKI D + ++ + S +N
Sbjct: 865 TDRRHQKINDPERLQKLELLLHECISRVN 893
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ T +++ DRPGLL +S L +L S+V A+I TH + + ++ D+ I
Sbjct: 815 SERCTIVDIFAHDRPGLLYSISRQLFELELSIVLAKISTHLDQVVDVFYITDRRHQ-KIN 873
Query: 173 DQKRLLKIKKLL 184
D +RL K++ LL
Sbjct: 874 DPERLQKLELLL 885
>gi|297202641|ref|ZP_06920038.1| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
gi|297148159|gb|EDY57250.2| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
Length = 292
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV + HATVI+V + + G+L + + L D + + A++S+ G +D FYV
Sbjct: 207 PARVTVAGAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYV 266
Query: 74 TDINGQKIGDQATISYIKTTVET 96
TD G +G S + ET
Sbjct: 267 TDGKGAPLGAGEAASVARKLEET 289
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + G+ +R A +ST+G D F+VTD G P+ S+
Sbjct: 223 IEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYVTDGKGAPLGAGEAASV 282
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 283 ARKLEETL 290
>gi|319776024|ref|YP_004138512.1| uridylyltransferase [Haemophilus influenzae F3047]
gi|317450615|emb|CBY86834.1| uridylyltransferase [Haemophilus influenzae F3047]
Length = 863
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 33/146 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQ-SSGCAIEDQKRLLKI 180
A + +Q A E+++RL ++
Sbjct: 832 AEDFFILTNQFGQALAREERERLNRV 857
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 378 PV 379
+
Sbjct: 845 AL 846
>gi|153803000|ref|ZP_01957586.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
gi|124121443|gb|EAY40186.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
Length = 881
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + G +++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLF-ILTNAQGTRLDEEEE 862
Query: 177 LLKIKKLLCNV 187
+KL+ +V
Sbjct: 863 QHLREKLIEHV 873
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY--- 288
+S+P V + + R T V I +KD+ L F TV D + + H + + Y
Sbjct: 681 SSKPLVLLSKKATRGGTEVFIYTKDQAAL-FATVVAELDRRNLNVHDAQIMASKDGYVLD 739
Query: 289 ----------------QEYYIKHV-----DGFPISSEAER-QRVMACLEAAIE-----RR 321
+ I+H+ DG P + +A R R + + + +
Sbjct: 740 TFMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTK 799
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+ + +E D GLL+ + E L + A+I+T+G + +D F +T+A G +D
Sbjct: 800 SKKRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLD 858
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+ID + AT++++ +R G LL+ I+ L DL L + + ++++G L F V
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 74 T-DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT--- 122
T N +K+ D + I+ T+ N +S +M + P K +++
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPKNQIDVDVATHV 126
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL E+ V+ D+S V SAEI T A +V
Sbjct: 127 TVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYV 180
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 14 PPRVVIDNDVCEHATVIQ--------VDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
PP+ ID DV H TV + V++ +R G+LLE+++ + D+++ + A I ++G
Sbjct: 113 PPKNQIDVDVATHVTVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGL 172
Query: 66 YLMDVFYVT 74
D FYVT
Sbjct: 173 IAKDKFYVT 181
>gi|329123179|ref|ZP_08251748.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
gi|327471524|gb|EGF16968.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 863
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 33/146 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQ-SSGCAIEDQKRLLKI 180
A + +Q A E+++RL ++
Sbjct: 832 AEDFFILTNQFGQALAREERERLNRV 857
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 378 PV 379
+
Sbjct: 845 AL 846
>gi|254226776|ref|ZP_04920350.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
gi|125620714|gb|EAZ49074.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
Length = 881
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + G +++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLF-ILTNAQGTRLDEEEE 862
Query: 177 LLKIKKLLCNV 187
+KL+ +V
Sbjct: 863 QHLREKLIEHV 873
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY--- 288
+S+P V + + R T V I +KD+ L F TV D + + H + + Y
Sbjct: 681 SSKPLVLLSKKATRGGTEVFIYTKDQAAL-FATVVAELDRRNLNVHDAQIMASKDGYVLD 739
Query: 289 ----------------QEYYIKHV-----DGFPISSEAER-QRVMACLEAAIE-----RR 321
+ I+H+ DG P + +A R R + + + +
Sbjct: 740 TFMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTK 799
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+ + +E D GLL+ + E L + A+I+T+G + +D F +T+A G +D
Sbjct: 800 SKKRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLD 858
>gi|15642260|ref|NP_231893.1| PII uridylyl-transferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586159|ref|ZP_01675950.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121729748|ref|ZP_01682187.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|147673286|ref|YP_001217777.1| PII uridylyl-transferase [Vibrio cholerae O395]
gi|153217366|ref|ZP_01951117.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|153823644|ref|ZP_01976311.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|153827573|ref|ZP_01980240.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227082386|ref|YP_002810937.1| PII uridylyl-transferase [Vibrio cholerae M66-2]
gi|227118708|ref|YP_002820604.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254849392|ref|ZP_05238742.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|298500363|ref|ZP_07010168.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
gi|9656824|gb|AAF95406.1| protein-P-II uridylyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549571|gb|EAX59595.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121628499|gb|EAX60985.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|124113612|gb|EAY32432.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|126518839|gb|EAZ76062.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|146315169|gb|ABQ19708.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|149737953|gb|EDM52858.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227010274|gb|ACP06486.1| protein-P-II uridylyltransferase [Vibrio cholerae M66-2]
gi|227014158|gb|ACP10368.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254845097|gb|EET23511.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|297541056|gb|EFH77110.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
Length = 881
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 863
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 864 HLR-EKLIEHV 873
>gi|254286066|ref|ZP_04961027.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
gi|150423976|gb|EDN15916.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
Length = 881
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 863
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 864 HLR-EKLIEHV 873
>gi|421351981|ref|ZP_15802346.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
gi|395952426|gb|EJH63040.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|417842180|ref|ZP_12488275.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19501]
gi|341947960|gb|EGT74601.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19501]
Length = 863
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 75/146 (51%), Gaps = 33/146 (22%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVK 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + ++L+ ++++A+I T +
Sbjct: 780 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQ-SSGCAIEDQKRLLKI 180
A + ++ A E+++RL ++
Sbjct: 832 AEDFFILTNRFGKALAREERERLNRV 857
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNRFGKAL 846
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + TVI+VD+ +R G+L ++ + L D ++ I A I++ G ++D FYV
Sbjct: 826 PTHITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 885
Query: 74 TDINGQKIGDQ 84
D+ G K+ Q
Sbjct: 886 KDMFGLKLHQQ 896
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 23/219 (10%)
Query: 102 NSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALL 160
+ +R+ + ++ T D PG+ S ++ L + ++V A +T + A A+
Sbjct: 715 DEIRTDLHPDTDRDATRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVF 774
Query: 161 HVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFAD 220
++D D R P + R L GE + L AD
Sbjct: 775 WLQDADGHPYASD---------------------RLPRLRAMIQRTLKGEIVAREAL-AD 812
Query: 221 RDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTV 280
RD + + H+T + + YT + + ++DRP LL+D L D + +
Sbjct: 813 RDKPKKRESAFRFPTHITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVI 872
Query: 281 VTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319
T + +Y+K + G + + R+ + L AI+
Sbjct: 873 ATFGAQVVDTFYVKDMFGLKLHQQNRREALEKKLRQAIK 911
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + + I A I+T G +V DTF+V D G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 890
>gi|171914691|ref|ZP_02930161.1| protein-P-II uridylyltransferase, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 934
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV I+ND+ VI++ +++R G+L ++ + L L I A I+++ G +D Y+
Sbjct: 834 PQRVYINNDLTTDYNVIEIQALDRIGLLYDIFMAIGQLGLNICHARINTEKGVALDAIYI 893
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVV 111
D QK+ D+ + ++ +E A F ++S G++
Sbjct: 894 QDKAEQKVTDKDVLKELQAQLE-EAVFSFGRQNSSGML 930
>gi|424618043|ref|ZP_18056714.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
gi|395961418|gb|EJH71746.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|422911100|ref|ZP_16945728.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|424660765|ref|ZP_18098012.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
gi|341632472|gb|EGS57338.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|408050138|gb|EKG85311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|297580906|ref|ZP_06942831.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
gi|297534732|gb|EFH73568.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
Length = 881
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 863
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 864 HLR-EKLIEHV 873
>gi|229513904|ref|ZP_04403366.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
gi|229349085|gb|EEO14042.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|320160714|ref|YP_004173938.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
gi|319994567|dbj|BAJ63338.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
Length = 1219
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71
+ P +V+DND EH T++ + S + G L E+ L + I + I + + DV
Sbjct: 667 LYPLEIVVDNDSSEHLTLLHIQSQDTVGFLYELTNALAITGIYIDRVRIETVNQRVRDVL 726
Query: 72 YVTDINGQKIGDQATISYIKTT 93
YVTD+NG KI + + ++T
Sbjct: 727 YVTDLNGNKITSEEKLRELRTA 748
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 314 LEAAIERRASEGLEL-ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372
LE ++ +SE L L + + D G L ++T L G+ I R I T+ ++V+D +VT
Sbjct: 670 LEIVVDNDSSEHLTLLHIQSQDTVGFLYELTNALAITGIYIDRVRIETVNQRVRDVLYVT 729
Query: 373 DASGNPV 379
D +GN +
Sbjct: 730 DLNGNKI 736
>gi|229507664|ref|ZP_04397169.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229512141|ref|ZP_04401620.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229519276|ref|ZP_04408719.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229524265|ref|ZP_04413670.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229607168|ref|YP_002877816.1| PII uridylyl-transferase [Vibrio cholerae MJ-1236]
gi|255747043|ref|ZP_05420988.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262161413|ref|ZP_06030523.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|262168262|ref|ZP_06035959.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|360036138|ref|YP_004937901.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742066|ref|YP_005334035.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|384425225|ref|YP_005634583.1| [protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|417814289|ref|ZP_12460942.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|417818026|ref|ZP_12464655.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|418335271|ref|ZP_12944182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|418338880|ref|ZP_12947774.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|418346804|ref|ZP_12951562.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|418350566|ref|ZP_12955297.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|418355711|ref|ZP_12958430.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|419827220|ref|ZP_14350719.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|421317962|ref|ZP_15768530.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|421322018|ref|ZP_15772571.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|421325820|ref|ZP_15776344.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|421329478|ref|ZP_15779988.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|421333434|ref|ZP_15783911.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|421336976|ref|ZP_15787437.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|421340404|ref|ZP_15790836.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|421348410|ref|ZP_15798787.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|422897359|ref|ZP_16934803.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|422903557|ref|ZP_16938527.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|422907442|ref|ZP_16942240.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|422914286|ref|ZP_16948791.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|422926490|ref|ZP_16959503.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|423145812|ref|ZP_17133406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|423150488|ref|ZP_17137802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|423154307|ref|ZP_17141488.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|423157390|ref|ZP_17144483.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|423160961|ref|ZP_17147901.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|423165788|ref|ZP_17152512.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|423731810|ref|ZP_17705113.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|423769093|ref|ZP_17713231.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|423895955|ref|ZP_17727434.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|423931487|ref|ZP_17731827.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|424003240|ref|ZP_17746315.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|424007031|ref|ZP_17750001.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|424025011|ref|ZP_17764661.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|424027897|ref|ZP_17767499.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|424587177|ref|ZP_18026755.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|424595829|ref|ZP_18035148.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|424599742|ref|ZP_18038920.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|424602503|ref|ZP_18041643.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|424607436|ref|ZP_18046377.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|424611254|ref|ZP_18050093.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|424614069|ref|ZP_18052854.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|424622827|ref|ZP_18061332.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|424645790|ref|ZP_18083525.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|424653561|ref|ZP_18090941.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|424657380|ref|ZP_18094665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|440710501|ref|ZP_20891149.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443504608|ref|ZP_21071564.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443508509|ref|ZP_21075270.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443512353|ref|ZP_21078988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443515907|ref|ZP_21082417.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443519701|ref|ZP_21086094.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443524592|ref|ZP_21090802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443532186|ref|ZP_21098200.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443535994|ref|ZP_21101865.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443539527|ref|ZP_21105381.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|449055281|ref|ZP_21733949.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
gi|50402122|sp|Q9KPV0.2|GLND_VIBCH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229337846|gb|EEO02863.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229343965|gb|EEO08940.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229352106|gb|EEO17047.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229355169|gb|EEO20090.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229369823|gb|ACQ60246.1| [Protein-PII] uridylyltransferase [Vibrio cholerae MJ-1236]
gi|255735445|gb|EET90845.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262023154|gb|EEY41858.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|262028724|gb|EEY47378.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|327484778|gb|AEA79185.1| [Protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|340036775|gb|EGQ97751.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|340037749|gb|EGQ98724.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|341620497|gb|EGS46268.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|341620633|gb|EGS46400.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|341621242|gb|EGS46989.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|341636528|gb|EGS61223.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|341645880|gb|EGS70004.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|356416647|gb|EHH70272.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|356417810|gb|EHH71423.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|356422650|gb|EHH76124.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|356427999|gb|EHH81230.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|356430522|gb|EHH83731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|356431788|gb|EHH84988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|356439280|gb|EHH92267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|356444238|gb|EHH97050.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|356445062|gb|EHH97871.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|356450289|gb|EHI03019.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|356452209|gb|EHI04888.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|356647292|gb|AET27347.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795576|gb|AFC59047.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|395916220|gb|EJH27050.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|395917658|gb|EJH28486.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|395919012|gb|EJH29836.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|395928012|gb|EJH38775.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|395928836|gb|EJH39589.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|395932075|gb|EJH42819.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|395939687|gb|EJH50369.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|395942989|gb|EJH53665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|395958328|gb|EJH68824.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|395958738|gb|EJH69209.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|395970366|gb|EJH80137.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|395972525|gb|EJH82115.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|395975181|gb|EJH84678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|408006605|gb|EKG44743.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|408011829|gb|EKG49630.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|408031198|gb|EKG67835.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|408041099|gb|EKG77239.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|408042427|gb|EKG78479.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|408052501|gb|EKG87540.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|408608010|gb|EKK81413.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|408622742|gb|EKK95712.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|408633370|gb|EKL05731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|408653714|gb|EKL24869.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|408654657|gb|EKL25792.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|408844885|gb|EKL85008.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|408845774|gb|EKL85889.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|408869891|gb|EKM09178.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|408878520|gb|EKM17521.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|439973830|gb|ELP50034.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443431079|gb|ELS73633.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443434917|gb|ELS81063.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443438741|gb|ELS88459.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443442844|gb|ELS96147.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443446700|gb|ELT03359.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443449450|gb|ELT09744.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443457576|gb|ELT24973.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443460884|gb|ELT31964.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443465627|gb|ELT40287.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|448265323|gb|EMB02558.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPK 382
+EL DR GLL+ + RI E + + A+I+T+G +V+D FF+TD +G P+ DP+
Sbjct: 821 VELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPLTDPE 876
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RVVI+ D T++++ + +R G+L V + ++ ++ ++ A I++ G + DVF++
Sbjct: 805 PTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 TDINGQKIGD 83
TD G+ + D
Sbjct: 865 TDKAGEPLTD 874
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATIS---------------YIKTTV 94
L L I A I+ S + ++ F V D +G+ I D + Y +
Sbjct: 733 LGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLEEIRHHLVEELDDPADYPRIVT 792
Query: 95 ETNASFLNSMRSSVGVVPSKE----YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW 150
+ L + VV ++ T +ELT DRPGLL+ V + + ++ +A+I
Sbjct: 793 RHTSRQLKHFKVPTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIA 852
Query: 151 THNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
T R + + D+ +G + D +R ++++ LC L
Sbjct: 853 TLGERVEDVFFITDK-AGEPLTDPERQARLRERLCETL 889
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V++ +R +L ++ L + L I+ A+I++ G +DVFYV+
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNS 103
D+ KI +Q + I+ + A NS
Sbjct: 894 DLLAHKITNQNRLKAIEKRLLAAAERANS 922
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 23/216 (10%)
Query: 111 VPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCA 170
+P+ + T I L D PG ++ + +++ A I H R G A
Sbjct: 729 MPAYDATMISLYAIDHPGFFYRIAGAIHATGGTILDARI--HTTR-----------DGMA 775
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRD--FERLDC 228
+++ L ++ +++T L +I A H R L A R F R D
Sbjct: 776 MDN----LLVQHTQGGIIKTGEHLNRMMQAIEDAATSH--IRTSNKLAALRPPLFWRGDA 829
Query: 229 VNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY 288
++ P V I + + +T + + ++DRP LL D C L + + + + T A
Sbjct: 830 --FHVEPSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAV 887
Query: 289 QEYYIKHVDGFPISSEAERQRVMACLEAAIERRASE 324
+Y+ + I+++ + + L AA ER S+
Sbjct: 888 DVFYVSDLLAHKITNQNRLKAIEKRLLAAAERANSK 923
>gi|302558147|ref|ZP_07310489.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475765|gb|EFL38858.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 823
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + + L D + + A++S+ G +D FYV
Sbjct: 738 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 797
Query: 74 TDINGQKIGDQATISYIKTTVET 96
T G + + ++ + ET
Sbjct: 798 TQEQGVPLPGEEAVAVARKLEET 820
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I R L + G+ +R A +ST+G D F+VT G P+
Sbjct: 754 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVTQEQGVPL 805
>gi|229522208|ref|ZP_04411625.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|419837969|ref|ZP_14361407.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|421354961|ref|ZP_15805293.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|423735926|ref|ZP_17709118.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|424010264|ref|ZP_17753198.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
gi|229341133|gb|EEO06138.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|395954086|gb|EJH64699.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|408629352|gb|EKL02051.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|408856517|gb|EKL96212.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|408863294|gb|EKM02784.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L DL L I A IS+ + DVFYV
Sbjct: 814 PSRVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYV 873
Query: 74 TDINGQKI 81
DI G KI
Sbjct: 874 KDIFGHKI 881
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQ 174
Y++ + D PGL S ++ V+ +++ A+I T N + +L V + G I ++
Sbjct: 714 YSTYSICTWDIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQV-NSPQGFMIIEE 772
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
R ++ + L VL G +R S+ +R L +R R + SR
Sbjct: 773 SRWSRVDEDLRQVL--TGKIRVASLVA---------KRQRPTLLTERPKPR-----FPSR 816
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
V I + DYT + I + D+ LL+ LTD+ + + T + +Y+K
Sbjct: 817 --VDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVK 874
Query: 295 HVDGFPISSEAERQRVMACLEAAIER 320
+ G I+S + + L A+E+
Sbjct: 875 DIFGHKITSVERLEEIREKLRVAVEQ 900
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+++YT D+ GLL IT L + GL I A+IST +V D F+V D G+ +
Sbjct: 830 IDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHKI 881
>gi|422923565|ref|ZP_16956712.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|424591969|ref|ZP_18031393.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
gi|341643854|gb|EGS68116.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|408029997|gb|EKG66678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|332296440|ref|YP_004438363.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
gi|332179543|gb|AEE15232.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
Length = 849
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 21 NDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQK 80
N++ +TVI++ + +RHG+L + Q L L L I A IS+ G D FY+T N K
Sbjct: 773 NNISPKSTVIEIIAEDRHGLLYRLTQTLSSLGLYIQTAKISTWEGRAEDAFYITKENNLK 832
Query: 81 IGDQATISYIKTTV 94
+ DQ Y+K +
Sbjct: 833 LSDQECQEYLKKII 846
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ +DR GLL +T+ L GL I+ A+IST + +D F++T +
Sbjct: 782 IEIIAEDRHGLLYRLTQTLSSLGLYIQTAKISTWEGRAEDAFYITKENN 830
>gi|429888049|ref|ZP_19369548.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
gi|429224925|gb|EKY31233.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
Length = 876
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 858
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 859 HLR-EKLIEHV 868
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 329 ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQ 388
E+ DR GLL I RIL ++GL +R A++ T+G D F+VTD +G P+ + ++
Sbjct: 700 EVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGKPLSEAAAEEVR 759
Query: 389 HQIGRTIL 396
+ +L
Sbjct: 760 RALETALL 767
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP VV+ ATV +V + +R G+L + + L D L + A + + G +DVFYV
Sbjct: 683 PPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYV 742
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMR 105
TD G+ + +A ++ +ET + L+ R
Sbjct: 743 TDTAGKPL-SEAAAEEVRRALET--ALLDGRR 771
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
P V +L + D T +R+ DRP LLF L+D V V T +A +Y+
Sbjct: 684 PPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVT 743
Query: 295 HVDGFPISSEAERQRVMACLEAAI 318
G P+ SEA + V LE A+
Sbjct: 744 DTAGKPL-SEAAAEEVRRALETAL 766
>gi|16273605|ref|NP_439860.1| PII uridylyl-transferase [Haemophilus influenzae Rd KW20]
gi|260581059|ref|ZP_05848881.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
gi|1169938|sp|P43919.1|GLND_HAEIN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1574572|gb|AAC23362.1| uridylyl transferase (glnD) [Haemophilus influenzae Rd KW20]
gi|260092299|gb|EEW76240.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
Length = 863
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 33/143 (23%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIVPNRQLQHFTVQ 779
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL + KE+T +EL D+ GLL++VS + T+L+ ++++A+I T +
Sbjct: 780 TDVRFLQENK--------KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEK 831
Query: 156 AAALLHVKDQ-SSGCAIEDQKRL 177
A + +Q A E+++RL
Sbjct: 832 AEDFFILTNQFGQALAREERERL 854
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 318 IERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
++ E E+EL D+ GLL+ +++I E L + A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 378 PV 379
+
Sbjct: 845 AL 846
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 9 IRRMNP---PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
++R P P V IDN + TVI+V + +R G L ++ + L +L+L I A I++ G
Sbjct: 771 MKRPGPRLRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKG 830
Query: 66 YLMDVFYVTDINGQKIGDQATISYI 90
D+F++ D G K+ D A + +
Sbjct: 831 RAADIFHIRDTEGGKLTDSARLQAV 855
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
YT IE+ TDR G L +++ L +LS S+ A+I T RAA + H++D + G + D
Sbjct: 792 YTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRD-TEGGKLTDSA 850
Query: 176 RLLKIKKLLC 185
RL + + L
Sbjct: 851 RLQAVHEALL 860
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
++ + D PGL + ++ L ++++A+I+T A V + G E+
Sbjct: 682 TLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGTA----VDVFTVGEPPEN---- 733
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHV 237
L ++ V R+ G R + I S R+ E R + L R RL RP V
Sbjct: 734 LFPHEVWARVKRSIGYARVGKLDIES-RL---EDRRNSPLTMKRPGPRL-------RPIV 782
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
TI + + YT + + + DR LFD L ++ ++ + T + A ++I+ +
Sbjct: 783 TIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRDTE 842
Query: 298 GFPISSEAERQRVMACL 314
G ++ A Q V L
Sbjct: 843 GGKLTDSARLQAVHEAL 859
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 8 LIRRMNPPR----VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
++++ N PR V++D + + T+I+V + +R G+L + L L++ I A IS+
Sbjct: 766 ILQQKNLPRKDDIVLVDEEASDFYTIIEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTP 825
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
G + DVFYVTD++G K+ D I+ ++
Sbjct: 826 GAQVADVFYVTDLSGNKLMDYEMHEKIRVSL 856
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+YT DR G+L IT L + I+ A+IST G +V D F+VTD SGN K++D
Sbjct: 792 IEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVADVFYVTDLSGN----KLMDYE 847
Query: 388 QHQ 390
H+
Sbjct: 848 MHE 850
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L G+ +R A ST+G D F+VTD+SG P+ P +
Sbjct: 798 IEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYVTDSSGAPLKPMHAAEV 857
Query: 388 QHQIGRTI 395
++ R +
Sbjct: 858 AQKVERAL 865
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + + ATVI+V + + G+L + + L + + A+ S+ G +D FYV
Sbjct: 782 PPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYV 841
Query: 74 TDINGQKI 81
TD +G +
Sbjct: 842 TDSSGAPL 849
>gi|421344317|ref|ZP_15794720.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
gi|395940397|gb|EJH51078.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
Length = 861
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 664 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 723
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 724 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 783
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 784 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 843
Query: 177 LLKIKKLLCNV 187
L+ +KL+ +V
Sbjct: 844 HLR-EKLIEHV 853
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VVI+N + TVI+V ++R G+L ++ + L+L I A++++ G + DVFYVT
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 75 DINGQKI 81
D+ G +I
Sbjct: 928 DLMGAQI 934
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
YT IE+TG DRPGLL +++ ++ LS ++ SA + T R + +V D G I
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDL-MGAQITAPT 938
Query: 176 RLLKIKKLLCNVL 188
R IK+ L ++L
Sbjct: 939 RQAAIKRALVHLL 951
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +T + + L I A ++T G +V+D F+VTD G + +
Sbjct: 883 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQI---TAPTR 939
Query: 388 QHQIGRTILQVKGNLNT 404
Q I R ++ + N +T
Sbjct: 940 QAAIKRALVHLLANPDT 956
>gi|226528888|ref|NP_001143395.1| uncharacterized protein LOC100276033 [Zea mays]
gi|195619682|gb|ACG31671.1| hypothetical protein [Zea mays]
Length = 277
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+ID D AT++++ +R G LL+ + L +L L + KA + D F +T
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 -DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIELT---- 122
G+KI D + ++ T+ N +S +M ++ G E +++
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 190
Query: 123 --------------GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162
DRPGLL ++ +++D+S +V S E T A A HV
Sbjct: 191 IYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFHV 244
>gi|375266429|ref|YP_005023872.1| PII uridylyl-transferase [Vibrio sp. EJY3]
gi|369841749|gb|AEX22893.1| PII uridylyl-transferase [Vibrio sp. EJY3]
Length = 874
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 6 AKLIRR--MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SS 62
A L+R + P V+I T + V S ++ + V+ L N + A I +S
Sbjct: 668 AHLLRMDDLTKPLVLISKKATRGGTEVFVYSKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSS 107
G+++D F V D +G+ I + + IK T ++T + ++++
Sbjct: 728 KDGHVIDTFIVLDQHGEAIDESRHAAVIKHLTHVLEDGRPTKIKTRRTPHKLQHFNVKTK 787
Query: 108 VGVVPS--KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQ 165
V +P+ K++T +E D PGLL++V DL+ ++ A+I T RA L +
Sbjct: 788 VDFLPTRGKKHTLMEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSG 847
Query: 166 SSGCAIEDQKRLLK 179
+ G E+Q+ L+
Sbjct: 848 TGGRLSEEQQNALR 861
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM------- 285
++P V I + R T V + SKD+P L V L + V+ ++T +
Sbjct: 677 TKPLVLISKKATRGGTEVFVYSKDQPALFATVVAELDRRNFNVHDAQIMTSKDGHVIDTF 736
Query: 286 -----------EAYQEYYIKHV-----DGFPISSEAER-----QRVMACLEA-AIERRAS 323
E+ IKH+ DG P + R Q + + R
Sbjct: 737 IVLDQHGEAIDESRHAAVIKHLTHVLEDGRPTKIKTRRTPHKLQHFNVKTKVDFLPTRGK 796
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
+ +E D GLL+ + R + + I A+I+T+G + +D F +T +G + +
Sbjct: 797 KHTLMEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSGTGGRLSEEQ 856
Query: 384 VDSIQHQIGRTI 395
++++ Q+ T+
Sbjct: 857 QNALREQLIETL 868
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VVIDN+ ATV++ +R G+L + + L D L I A+I G +D FYV
Sbjct: 835 PTVVIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 894
Query: 75 DINGQKIGDQATIS 88
G K+ D ++
Sbjct: 895 TSEGGKVADAKKVT 908
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 23 VCEHATVIQVDSVNRHGILLEVIQFLVDL--NLVITKAYISSDGGYLMDVFYVTDINGQK 80
V +A I + + +R G+ ++ + L N+V + + S G L DVF+V D+ G
Sbjct: 732 VGANAAEIVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQAL-DVFHVQDVTGAA 790
Query: 81 IG-------------DQATISYIKTTVETNASFLNSMRSSVGVVP--------SKEYTSI 119
+G +A +E S ++ + P S E T +
Sbjct: 791 LGCENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVV 850
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
E +G DRPGLL ++ L D S+ SA I + RA +V+ S G + D K++
Sbjct: 851 EASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ-TSEGGKVADAKKV 907
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 33/163 (20%)
Query: 250 VTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYIKHVDGFPISSEAER- 307
+ I +KDR L D ++ + V V T R +A ++++ V G + E R
Sbjct: 739 IVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAALGCENPRV 798
Query: 308 -QRVMACLEAA-------IERR-----------------------ASEGLELELYTDDRF 336
+R+ LEAA IE R ++E +E DR
Sbjct: 799 LRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEASGRDRP 858
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
GLL + R L + GL I+ A I G + D F+V + G V
Sbjct: 859 GLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGGKV 901
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 42/181 (23%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P+V+IDN AT+++++ ++ G L + + + +L L I++A I+ + FYVT
Sbjct: 35 PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAEITESN---QNRFYVT 91
Query: 75 D-INGQKIGDQATISYIKTTVETNASFL-------------NSMRSSVG-------VVPS 113
D + +KI A + ++ TV T + NS V V P+
Sbjct: 92 DHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKPYEVADDAETEYVTPT 151
Query: 114 KEY-----TSIELTG-------------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
K+ T I +T TDRPGLLSE+ VL DL+ +VV AEI T A
Sbjct: 152 KKKRQIVPTRITVTSVSNGTKSKLLIETTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAA 211
Query: 156 A 156
A
Sbjct: 212 A 212
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT---DASGNPVDPKI 383
+L + T DR GLLS+I R+L++ L + +AEI T+G DT T A + ++ +
Sbjct: 174 KLLIETTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAAAVDTMLCTYHGKALNDNMEQLV 233
Query: 384 VDSIQHQIGR 393
V+++Q+ +GR
Sbjct: 234 VNTLQYYLGR 243
>gi|385330904|ref|YP_005884855.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
gi|311694054|gb|ADP96927.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
Length = 881
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ T DR GLL+ I ++L E+ + + A+I+T+G +V+D FFVTD G P+
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPI 860
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV++V + +R G+L + Q L++ + ++ A I++ G + DVF+V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFV 852
Query: 74 TDINGQKIGDQA 85
TD +G+ I + A
Sbjct: 853 TDEHGEPIRELA 864
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VVI+N + TVI+V ++R G+L ++ + L+L I A++++ G + DVFYVT
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 75 DINGQKI 81
D+ G +I
Sbjct: 910 DLMGAQI 916
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
YT IE+TG DRPGLL +++ ++ LS ++ SA + T R + +V D G I
Sbjct: 862 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDL-MGAQITAPT 920
Query: 176 RLLKIKKLLCNVL 188
R IK+ L ++L
Sbjct: 921 RQAAIKRALVHLL 933
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +T + + L I A ++T G +V+D F+VTD G + +
Sbjct: 865 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQI---TAPTR 921
Query: 388 QHQIGRTILQVKGN 401
Q I R ++ + N
Sbjct: 922 QAAIKRALVHLLAN 935
>gi|262375426|ref|ZP_06068659.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
gi|262309680|gb|EEY90810.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
Length = 890
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 33/169 (19%)
Query: 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQ-------------------YVVY--HGTVVTG 283
+D + I ++D+P L TV L M YVV GT++T
Sbjct: 696 QDAVQIFIYTQDQPNLFATTVAILDRMNLDVQDARIITATKAFSLDTYVVLDRFGTLLTD 755
Query: 284 R------MEAYQEYYIKHVDGFP--ISSEAERQRVMACLEAAIERRASEGLE---LELYT 332
+EA ++ + H D +P + RQ +E +E + L +E+ T
Sbjct: 756 PEREATVIEALKDA-LSHSDEYPGLMQRRIPRQLRHFDIENTVEISVNPALNQNMVEIAT 814
Query: 333 DDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
D GLL+ I + GL I A+I+T+G + +D FFVT GNP+ P
Sbjct: 815 LDHPGLLAKIGGLFMMQGLDIHSAKIATLGERAEDIFFVTKKDGNPMTP 863
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 3 DEFAKLIRRMN-PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS 61
D+ K R N P V DN+ E T+I+VD+ +R G+L ++ + L N+ I A I+
Sbjct: 834 DKIKKRERAFNVPTHVTFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 62 SDGGYLMDVFYVTDINGQKIGDQA 85
+ G ++D FYV D+ G K +A
Sbjct: 894 TYGEQVVDTFYVKDMFGLKYHSEA 917
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 27/204 (13%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+ S ++ L + +VV A +T + ++D + G E RL ++ ++
Sbjct: 758 DHPGIFSRIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-AEGHPFE-ASRLPRLTQM 815
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ L+ G++ S ++ ER +N HVT +
Sbjct: 816 IHKTLK--GEVVARDALKSRDKIKKRER------------------AFNVPTHVTFDNEG 855
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
YT + + ++DRP LL+D L + + + T + +Y+K + G S
Sbjct: 856 SEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYHS 915
Query: 304 EAERQRVMACLEAAI----ERRAS 323
EA+++ + A L AI ER AS
Sbjct: 916 EAKQRGLEAKLRKAIVEGAERAAS 939
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V DTF+V D G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++V+A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|410465082|ref|ZP_11318452.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981801|gb|EKO38320.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 884
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
+PP V IDN + TVI V +R G+L ++ + L ++ L A + + G + DVFY
Sbjct: 791 SPPEVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFY 850
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V G+++ D ++ IK +
Sbjct: 851 VRGTAGRRVEDPEQLAEIKAAL 872
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 315 EAAIERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
E I+ +AS+ +++ DDR GLL DI R L E GL A++ T +V+D F+V
Sbjct: 794 EVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 374 ASGNPV-DPKIVDSIQHQI 391
+G V DP+ + I+ +
Sbjct: 854 TAGRRVEDPEQLAEIKAAL 872
>gi|149374439|ref|ZP_01892213.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
gi|149361142|gb|EDM49592.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
Length = 881
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR GLL+ + ++L E+ + + A+I+T+G +V+D FFVTD G + DP + +
Sbjct: 809 MEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFVTDEHGEQISDPAVCQA 868
Query: 387 IQHQI 391
+Q +
Sbjct: 869 LQQDL 873
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV++V + +R G+L V Q L++ + +T A I++ G + DVF+V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFV 852
Query: 74 TDINGQKIGDQA 85
TD +G++I D A
Sbjct: 853 TDEHGEQISDPA 864
>gi|153820325|ref|ZP_01972992.1| [Protein-PII] uridylyltransferase, partial [Vibrio cholerae NCTC
8457]
gi|126509132|gb|EAZ71726.1| [Protein-PII] uridylyltransferase [Vibrio cholerae NCTC 8457]
Length = 334
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ T + + + ++ + V+ L NL + A I +S GY++D F V
Sbjct: 137 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 196
Query: 74 TDINGQKIGD---QATISYIKTTVETNASFLNSMR------------SSVGVVP--SKEY 116
D NGQ I + QA I ++ +E R + V +P SK+
Sbjct: 197 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 256
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +E D PGLL+ V A +L+ + +A+I T RA L + + E++++
Sbjct: 257 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 316
Query: 177 LLKIK 181
L+ K
Sbjct: 317 HLREK 321
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V DN+ + TVI+VD+ +R G+L ++ + L D ++ I A I++ G ++D FYV
Sbjct: 834 PTHVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 893
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 894 KDMFGLKL 901
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 27/202 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + ++V A +T + A A+ ++D D
Sbjct: 745 ADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYAAD--------- 795
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
R P + R L GE + L A RD + + HVT +
Sbjct: 796 ------------RLPRLRTMIQRTLKGEIVAREAL-AGRDKPKKREAAFRFPTHVTFDNE 842
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF--- 299
+ YT + + ++DRP LL+D L D + + T + +Y+K + G
Sbjct: 843 ASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKLH 902
Query: 300 -PISSEAERQRVMACLEAAIER 320
P EA +R+ ++ +ER
Sbjct: 903 QPQRREALEKRLRQAIKEGVER 924
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + + I A I+T G +V DTF+V D G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 898
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++V+A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSSVG 109
G+++D F V D +G+ I + A I + IKT N ++++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK---IKKL 183
G E+Q+ L+ I+KL
Sbjct: 850 GRLSEEQQDELRERLIEKL 868
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 846 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYV 905
Query: 74 TDINGQK 80
D+ G K
Sbjct: 906 KDMFGLK 912
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+N H+T + YT + + ++DRP LL+D L + + + T +
Sbjct: 843 FNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDT 902
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+Y+K + G SE++++ LEA + + +EG E
Sbjct: 903 FYVKDMFGLKYYSESKQR----TLEAKLRKAIAEGAE 935
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V DTF+V D G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
>gi|239908123|ref|YP_002954864.1| protein-PII uridylyltransferase [Desulfovibrio magneticus RS-1]
gi|239797989|dbj|BAH76978.1| putative protein-PII uridylyltransferase [Desulfovibrio magneticus
RS-1]
Length = 884
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
+PP V IDN + TVI V +R G+L ++ + L ++ L A + + G + DVFY
Sbjct: 791 SPPEVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFY 850
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V G+++ D ++ IK +
Sbjct: 851 VRGPAGRRVEDPEQLAEIKAAL 872
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 315 EAAIERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
E AI+ +AS+ +++ DDR GLL DI R L E GL A++ T +V+D F+V
Sbjct: 794 EVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 374 ASGNPV-DPKIVDSIQHQI 391
+G V DP+ + I+ +
Sbjct: 854 PAGRRVEDPEQLAEIKAAL 872
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQK 80
D +A + +R G+ ++ + +L + A + +S +DVFYV D G+
Sbjct: 752 DTTRNAACFCITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKP 811
Query: 81 IG--DQATISYIKTTVETNAS----------FLNSMRSSV-GVVPS--------KEYTSI 119
G D I ++ +E +N+ R++ + P+ + T I
Sbjct: 812 FGHDDPGRIRQMEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTVVFDDESNPQMTII 871
Query: 120 ELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLK 179
E++G DRPGLL++V++VL SA I + RA +V D + + +R K
Sbjct: 872 EVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHFTRKQLTKAQR-DK 930
Query: 180 IKKLLCNVL 188
+ + L VL
Sbjct: 931 VHRALTEVL 939
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P VV D++ T+I+V +R G+L +V L L A+I G +D FYV
Sbjct: 856 PTVVFDDESNPQMTIIEVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVV 915
Query: 75 D 75
D
Sbjct: 916 D 916
>gi|88706585|ref|ZP_01104288.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
gi|88699081|gb|EAQ96197.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
Length = 892
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ + DR GLL+ I + E+G+ A+I T+G +V+D FFVTD P+ D + +
Sbjct: 818 LEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFVTDTEQQPIRDEALAEK 877
Query: 387 IQHQIGRTI 395
IQ I T+
Sbjct: 878 IQAAIRDTL 886
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 49 VDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYI------KTTVETNASFLN 102
+DL++ + Y SDG L D ++V D +G + D + +I K + TNA+F+
Sbjct: 730 LDLSIHDARIYHGSDGMSL-DTYFVLDSSGNAVEDVERLRHITSYLSDKLSPTTNANFIP 788
Query: 103 S-------------MRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
S +++ + P +E + +E+ DRPGLL+ + V + +A+I
Sbjct: 789 SRLTPRRVRSFCLATETNMRIDPVREVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKI 848
Query: 150 WTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
T R + V D + I D+ KI+ + + L
Sbjct: 849 QTLGERVEDVFFVTD-TEQQPIRDEALAEKIQAAIRDTL 886
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKI 81
D +V++V S++R G+L + + V+ ++ A I + G + DVF+VTD Q I
Sbjct: 810 DPVREVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFVTDTEQQPI 869
Query: 82 GDQATISYIKTTV 94
D+A I+ +
Sbjct: 870 RDEALAEKIQAAI 882
>gi|262393517|ref|YP_003285371.1| [protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSSVG 109
G+++D F V D +G+ I + A I + IKT N ++++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK---IKKL 183
G E+Q+ L+ I+KL
Sbjct: 850 GRLSEEQQDELRERLIEKL 868
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TVI+V++ +R +L + + L + LV+ A+I+ G +D FYVT
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 75 DINGQKI 81
D+ G K+
Sbjct: 885 DLTGGKL 891
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 26/201 (12%)
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH---VKDQSSGCAIED 173
T + + +D PGL ++ + +++ A I H +R L V+D G +
Sbjct: 727 TLVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTSRTGWALDNFLVQD-PHGAPFRE 783
Query: 174 QKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNS 233
+++L ++KK + + L DL TP + A R ++
Sbjct: 784 EQQLERLKKSIADALANRIDL-TPKL-------------------AQRPLPHSRSKAFDV 823
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
P V + + +T + + ++DRP LL L + + VV+ + A +Y+
Sbjct: 824 SPRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYV 883
Query: 294 KHVDGFPISSEAERQRVMACL 314
+ G ++ + R+ A L
Sbjct: 884 TDLTGGKLAGGERQDRLEARL 904
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR LL+ + R+L E L + A I+ G + DTF+VTD +G +
Sbjct: 840 IEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGGKL 891
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 7 KLIRRMNP---PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
K RR P +V +DN+ + T+++V + +R G+L + + L++ + +A I+++
Sbjct: 776 KTFRRSVPLPETKVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTE 835
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIKTTV 94
G ++D FY+TD++ +K+ D + IK +
Sbjct: 836 GNRVIDSFYITDMDYKKVTDPQKLLRIKERI 866
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR G+L IT++L E +RRA I+T G +V D+F++TD V DP+ +
Sbjct: 802 VEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITDMDYKKVTDPQKLLR 861
Query: 387 IQHQI 391
I+ +I
Sbjct: 862 IKERI 866
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 673 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 732
Query: 65 GYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSSVG 109
G+++D F V D +G+ I + A I + IKT N ++++ V
Sbjct: 733 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 792
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 793 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 852
Query: 168 GCAIEDQKRLLK---IKKL 183
G E+Q+ L+ I+KL
Sbjct: 853 GRLSEEQQDELRERLIEKL 871
>gi|451970864|ref|ZP_21924088.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
gi|451933281|gb|EMD80951.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSSVG 109
G+++D F V D +G+ I + A I + IKT N ++++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK---IKKL 183
G E+Q+ L+ I+KL
Sbjct: 850 GRLSEEQQDELRERLIEKL 868
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G+ I + + K T ++T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLVHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK++T +EL D PGLL+EV A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKHTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQALR 861
>gi|406833391|ref|ZP_11092985.1| protein-P-II uridylyltransferase [Schlesneria paludicola DSM 18645]
Length = 915
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RVV+DN+ + TVI V + +R G+L + + L + NL + A I++ ++DVF+V
Sbjct: 820 PMRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFV 879
Query: 74 TDINGQKIGD 83
T+ +G+K+ D
Sbjct: 880 TESDGRKVRD 889
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
++++ DR GLL ITR L E L + A+I+T +V D FFVT++ G V
Sbjct: 836 IDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTESDGRKV 887
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 104 MRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVK 163
MR V S YT I++ DRPGLL ++ L + + SV A+I TH + + V
Sbjct: 821 MRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVT 880
Query: 164 DQSSGCAIEDQKRLLKIKKLLC 185
+S G + D +RL ++ L
Sbjct: 881 -ESDGRKVRDGERLKSLRDFLT 901
>gi|165976013|ref|YP_001651606.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876114|gb|ABY69162.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 850
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|91775885|ref|YP_545641.1| PII uridylyl-transferase [Methylobacillus flagellatus KT]
gi|91709872|gb|ABE49800.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Methylobacillus
flagellatus KT]
Length = 856
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 43/61 (70%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
L++ T+DR GLLS I +L+++ + + A+I+T+G +V+DTF + D SG + +++ ++
Sbjct: 789 LDIATNDRPGLLSRIAHVLQQHHIRLHTAKINTLGNRVEDTFLIADQSGQRLTAEVLAAL 848
Query: 388 Q 388
+
Sbjct: 849 E 849
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R+ DN V E TVI + + ++ G+L + L L L I + IS+ + DVFYV
Sbjct: 817 PTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYV 876
Query: 74 TDINGQKIGDQATISYIKTTVET 96
DI G KI D+A + ++ +++
Sbjct: 877 RDIFGHKIMDEAKLESVRERLKS 899
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 318 IERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+ + SEG +++YT D+ GLL IT L + GL I ++IST +V D F+V D G
Sbjct: 822 FDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFG 881
Query: 377 NPV-DPKIVDSIQHQIGRTI 395
+ + D ++S++ ++ I
Sbjct: 882 HKIMDEAKLESVRERLKSAI 901
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
E A+L P RVVIDN TVI+++ +R G+L +V + + L I A+I++
Sbjct: 833 EPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTY 892
Query: 64 GGYLMDVFYVTDINGQKI 81
G +DVFYV D+ G K+
Sbjct: 893 GVRAVDVFYVKDVFGLKV 910
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S +T IEL G DRPGLL +V+A +++ + SA I T+ RA + +VKD G +E
Sbjct: 853 SNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKD-VFGLKVE 911
Query: 173 DQKR 176
+ ++
Sbjct: 912 NDRK 915
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQ--- 165
V+ ++ T + + +D PGL S ++ L ++V A I T N A V+D
Sbjct: 735 VLEARAVTEVTVYCSDHPGLFSRIAGALAVAGATIVDARIHTMTNGMALDTFWVQDAQPG 794
Query: 166 SSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
+G A + +L ++ L+ L +L + ++ R+ R
Sbjct: 795 GAGGAFDASHKLARLSVLIEQALSGRLNL------------------VQEIRKVRREPAR 836
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
L V R V I + + +T + + +DRP LL D +++ + + T +
Sbjct: 837 LRAVQVPGR--VVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGV 894
Query: 286 EAYQEYYIKHVDGFPISSE 304
A +Y+K V G + ++
Sbjct: 895 RAVDVFYVKDVFGLKVEND 913
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+EL DR GLL D+T + E GL I A I+T G + D F+V D G V+
Sbjct: 859 IELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 911
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 33/171 (19%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN V ATV+ V+ ++ LL+ + L +L L I +A IS DG VFY+T
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATIS-DGST---VFYIT 122
Query: 75 DIN-GQKIGDQATISYIKTTV---------ETNASFLNS-----------------MRSS 107
D + +KI A + I+ T+ E +F + ++++
Sbjct: 123 DADTSEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTT 182
Query: 108 VGVVPSKEY--TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARA 156
+ V +K + + + +DRPGLL ++ VL D++ +VVSAEI T A
Sbjct: 183 IDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLA 233
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 37/193 (19%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAY------ 288
P V I + D T +T+ ++ L D V L ++ + T+ G Y
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATISDGSTVFYITDADT 126
Query: 289 QEYYIKH--------------VDGFPISSEA----------------ERQRVMACLEAAI 318
E +K VD FP EA R+RV+
Sbjct: 127 SEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTTIDVT 186
Query: 319 ERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
E + L + T DR GLL DI R+L++ L + AEI T G KD FF+T G P
Sbjct: 187 EAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFIT-YHGEP 245
Query: 379 VDPKIVDSIQHQI 391
++ +V + + +
Sbjct: 246 LNSPMVTLVTNAL 258
>gi|374854463|dbj|BAL57344.1| protein-P-II uridylyltransferase [uncultured gamma proteobacterium]
Length = 859
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 43/185 (23%)
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
++ P V + + R V + +DR + T L + TV+ R+E Q+
Sbjct: 663 HALPLVLLRPQNRRGSAEVFVYMRDRDAIFAQTAALLEQLGL-----TVLAARLETTQDG 717
Query: 292 YIKHV------DGFPISSEAERQ-----RVMACLE------AAIERRASEGLE------- 327
Y+ + DG PI + RQ R+ CL+ AIERR + L
Sbjct: 718 YVVNSFLVLERDGQPIL-DLSRQYQIVTRLQRCLKDPRPSCFAIERRPNRRLRHFSIPTQ 776
Query: 328 -------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDA 374
LEL DR GLL+ + + + L + A I+T+G + +D FF+TD
Sbjct: 777 VHFYPDAKHGRTMLELIAADRPGLLARVGEVFERFRLRLHEARIATLGNRAEDIFFLTDC 836
Query: 375 SGNPV 379
G P+
Sbjct: 837 QGQPL 841
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + ATVI+V S + G+L + + L D N+ + A++S+ G +D FYV
Sbjct: 748 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYV 807
Query: 74 TDINGQKI-GDQA 85
T G + GD+A
Sbjct: 808 TGPEGAPLPGDEA 820
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ + D GLL I R L + + +R A +ST+G D F+VT G P+ +S+
Sbjct: 764 IEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 823
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 824 ARKLEETL 831
>gi|307251346|ref|ZP_07533262.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306856587|gb|EFM88727.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 850
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|46143705|ref|ZP_00134550.2| COG2844: UTP:GlnB (protein PII) uridylyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208080|ref|YP_001053305.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|126096872|gb|ABN73700.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 850
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDR 126
MDVF+VTD G K+ + + I+YI E + N + + + T++ELTG R
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYI----EQSLGMWNGPTRPMAL---EGLTALELTGAGR 139
Query: 127 PGLLSEVSAVLTDLSC 142
GL+SEV AVL D+ C
Sbjct: 140 TGLISEVFAVLADMDC 155
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V ID + H T++++ +R G LL+ ++ L DL L + K ++ G + +T
Sbjct: 33 PIVHIDQESDPHVTIVELSYGDRLGALLDTMKALKDLGLNVVKGSVAVSGKTKSNRLSIT 92
Query: 75 -DINGQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEY---TSIELTG 123
G+K+ D + I+ T+ +N +S +M + G P K+ T I +T
Sbjct: 93 RAATGRKVEDPELLESIRLTIISNLLQYHPESSEKLAMGEAFGKKPPKKIDVKTHITVTD 152
Query: 124 ------------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
D+PGLL ++ ++T S +V SAEI T A HV G A+
Sbjct: 153 QGPARSLLTIETADKPGLLLDIVEMITATSVTVESAEIDTEGLVARDRFHV--SYGGAAL 210
Query: 172 EDQKRLLKIKKLLCNVLR 189
+ ++L N LR
Sbjct: 211 TKS-----LAEVLVNCLR 223
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 39/171 (22%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN+ AT++ V+ +R G LL+ I L L L I +A + SD + FYVT
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREH---KFYVT 102
Query: 75 DI-NGQKIGDQATISYIKTTVETN------------ASFLNSMRSSV---GVVPSKEY-- 116
D+ +K+ A + I+ T+ N A + R +V + P+
Sbjct: 103 DMRTSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGA 162
Query: 117 -----TSIEL----TGT---------DRPGLLSEVSAVLTDLSCSVVSAEI 149
T IE+ TGT DRPGLL+++ VL D++ +VVSAE+
Sbjct: 163 KRGISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEV 213
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 332 TDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPK---IVDSI 387
T DR GLL+DI R+L++ L + AE+ T+GR D F +T G P+ DP V+++
Sbjct: 187 TLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFNIT-YHGEPLSDPMCQLTVNAL 245
Query: 388 QHQIGR 393
Q+ + +
Sbjct: 246 QYYLSQ 251
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I I ++ L ++ A+I+T+G +V+D F++TDA P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKR 876
Query: 387 IQHQIGRTILQVKGNLNTP 405
+Q + + Q G P
Sbjct: 877 LQAALVEQLSQDNGRDTLP 895
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 3 DEFAKLIRRMNP---------PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNL 53
D++ +I+R P P+V I D +V++V + +R G+L + +D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDAVRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ A I++ G + DVFY+TD Q + D
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLAD 870
>gi|307261058|ref|ZP_07542738.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869235|gb|EFN01032.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 850
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|307256623|ref|ZP_07538403.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864871|gb|EFM96774.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 850
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ N+ AT I + ++ + L + Q L + I A I +S G ++D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 TDINGQKIGDQATISYIKTTVE------------------TNASFLNSMRSSVGVVPSKE 115
T++NG+ + ++ IK ++E + SF + +
Sbjct: 719 TELNGKPL-EEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T+ EL DR GLL+ VS+V L ++++A+I T R V Q + +
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQ 837
Query: 176 RLLK 179
+ LK
Sbjct: 838 KALK 841
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ ++ + + GL + A+I+T+G +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 388 Q 388
+
Sbjct: 841 K 841
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHN-ARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S +S L + +VV A +T N A A ++D G ++ R+ +++K
Sbjct: 739 ADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQDGDDGPY--EEARIPRLRK 796
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L S V+ E DRD + + H+T +
Sbjct: 797 MIEKTL--------------SGEVVATE------AIRDRDKIKKRERAFRVPTHITFDNE 836
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL D CL M + + T + +Y+K + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDMFGLKYH 896
Query: 303 SEAERQRVMACLEAAIERRASEGLE 327
+ A +QR LE + S+G E
Sbjct: 897 A-ASKQR---TLEKKMREAISKGAE 917
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L +N+ I+ A I++ G ++D FYV
Sbjct: 828 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYV 887
Query: 74 TDINGQK 80
D+ G K
Sbjct: 888 KDMFGLK 894
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 844 IEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDMFG 892
>gi|260767827|ref|ZP_05876762.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
gi|260617336|gb|EEX42520.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
Length = 874
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
GY++D F V D NGQ I + + K T ++T N +++ V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALL 160
+P SK+ T +E D PGLL+ V A +L + +A+I T RA L
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERAEDLF 842
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 848 PTSITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYV 907
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 908 KDMFGLKF 915
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 89/240 (37%), Gaps = 32/240 (13%)
Query: 94 VETNASFLNSMRSSVG-------VVPS--KEYTSIELTGTDRPGLLSEVSAVLTDLSCSV 144
V + F +R +G + P ++ T + + D PG+ S + L + ++
Sbjct: 720 VTAHVDFARLLRGGIGHDEVRFEITPDEDRDATRVCIVMEDHPGIFSRMCGALALVQANI 779
Query: 145 VSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISS 203
A +T + A A V+DQ D R P +
Sbjct: 780 KDARTFTSKDGYACAAFWVQDQDGHPYETD---------------------RLPRLRDMI 818
Query: 204 ARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFD 263
+ L GE + + F DRD + + +T + YT + + ++DRP LL+D
Sbjct: 819 GKTLKGEV-VAKEAFRDRDKLKKREAAFKVPTSITFDNDGSEIYTIIEVDTRDRPGLLYD 877
Query: 264 TVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRAS 323
L + + T + +Y+K + G SE+ R+ + A L AI + A
Sbjct: 878 LTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRALEAKLRDAIRQGAQ 937
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 32/166 (19%)
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEYYIKHVDGFP- 300
DRD T V I +D P + L +Q + T + A ++++ DG P
Sbjct: 747 EDRDATRVCIVMEDHPGIFSRMCGALALVQANIKDARTFTSKDGYACAAFWVQDQDGHPY 806
Query: 301 --------------------ISSEAERQR-VMACLEAAIERRAS-----EGLEL----EL 330
++ EA R R + EAA + S +G E+ E+
Sbjct: 807 ETDRLPRLRDMIGKTLKGEVVAKEAFRDRDKLKKREAAFKVPTSITFDNDGSEIYTIIEV 866
Query: 331 YTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 867 DTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFG 912
>gi|254229487|ref|ZP_04922901.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|151937952|gb|EDN56796.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L N + A I +S
Sbjct: 97 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 156
Query: 65 GYLMDVFYVTDINGQKIGDQ---ATISY------------IKTTVETNASFLNSMRSSVG 109
G+++D F V D +G+ I + A I + IKT N ++++ V
Sbjct: 157 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 216
Query: 110 VVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P+K ++T +E D PGLL++V DL+ ++ A+I T RA L + +
Sbjct: 217 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 276
Query: 168 GCAIEDQKRLLK---IKKL 183
G E+Q+ L+ I+KL
Sbjct: 277 GRLSEEQQDELRERLIEKL 295
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 96 TNASFLNSMRSSVGVV--PSKEY-----TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAE 148
T AS S R S+G+ P++ T++ELTG R GL+SEV AVL D+ C VV
Sbjct: 84 TTASSPTSSRLSLGMWNGPTRPMALEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGR 143
Query: 149 IWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
W H L+ ++++ + D +R+ +I+
Sbjct: 144 AWMHRVHLGCLIFLRNEET-----DTERMARIE 171
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYV 887
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 888 KDMFGLKF 895
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 23/197 (11%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+ ++ L + +VV A +T + A ++D S D+ RL +++K+
Sbjct: 740 DHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQD--SDDTPYDEDRLPRLRKM 797
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ L GD+ L + DRD + + H+T +
Sbjct: 798 IERTL--AGDI------------------LPRDALTDRDKIKKRERAFKVPTHITFDNDG 837
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
YT + + ++DRP LLFD L + + + T + +Y+K + G S
Sbjct: 838 SEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDMFGLKFYS 897
Query: 304 EAERQRVMACLEAAIER 320
E++++ + L AIE+
Sbjct: 898 ESKQKTLERKLRDAIEQ 914
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG---------NP 378
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 844 IEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDMFGLKFYSESKQKT 903
Query: 379 VDPKIVDSIQHQIGRTI 395
++ K+ D+I+ + R +
Sbjct: 904 LERKLRDAIEQGVERAV 920
>gi|375130169|ref|YP_004992269.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
gi|315179343|gb|ADT86257.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
Length = 874
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
GY++D F V D NGQ I + + K T ++T N +++ V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALL 160
+P SK+ T +E D PGLL+ V A +L + +A+I T RA L
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERAEDLF 842
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L ++ L + I A++++ G +D FY+T
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLT 881
Query: 75 DINGQKIGDQATISYIK 91
D+ G KIG + + I+
Sbjct: 882 DLTGDKIGAASRLKTIE 898
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 126 RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164
+PGL E+ A LT+L C+VV+AE+WTHN +A ++HV +
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|145641019|ref|ZP_01796600.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|145274180|gb|EDK14045.1| PII uridylyl-transferase [Haemophilus influenzae 22.4-21]
Length = 131
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 32/125 (25%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIG-------DQATISYIKT-----------------TVE 95
I++ GY+ D F +T++NG+ + +QA +++ TV+
Sbjct: 14 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 73
Query: 96 TNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
T+ FL+ + KE+T +EL D+PGLL++VS + T+L+ ++++A+I T +
Sbjct: 74 TDVRFLHENK--------KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEK 125
Query: 156 AAALL 160
A L
Sbjct: 126 AEDFL 130
>gi|87198706|ref|YP_495963.1| PII uridylyl-transferase [Novosphingobium aromaticivorans DSM
12444]
gi|123490505|sp|Q2GAJ4.1|GLND_NOVAD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|87134387|gb|ABD25129.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Novosphingobium
aromaticivorans DSM 12444]
Length = 912
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ DN TVI+V + +R +L + + L + L++ A+I++ G +D FYVT
Sbjct: 820 PIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVT 879
Query: 75 DINGQKIGDQATISYIK 91
D+ G+K+ +A + ++
Sbjct: 880 DVLGEKVDSEARMKAVE 896
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 34/258 (13%)
Query: 78 GQKIGDQATISYIKTTVETNASFLNSMRSSVGVV--------PSKEYTSIELTGTDRPGL 129
G+++GD I+ + + N L M ++G + P++ T + + D PGL
Sbjct: 678 GRQLGDAYWIAEPEDIIALN---LQQMDQALGELLSVEAHWYPARGATLVTVLAADHPGL 734
Query: 130 LSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188
++ + +++ A I T N A V+D G + + ++ ++K + + L
Sbjct: 735 FYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQD-PLGRPLNEASQIERLKNAIADAL 793
Query: 189 RTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYT 248
L P + A R R ++ RP V + + +T
Sbjct: 794 ANRVKL-VPQL-------------------AARPLARPRADAFDVRPIVIFDNKASNRFT 833
Query: 249 AVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQ 308
+ + ++DRP LL L + + +V+ + T A +Y+ V G + SEA +
Sbjct: 834 VIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKVDSEARMK 893
Query: 309 RVMA-CLEAAIERRASEG 325
V LEAA +R+ +
Sbjct: 894 AVEKRLLEAAEDRKVKDA 911
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
+E+ DR LL+ + R L E L + A I+T G + DTF+VTD G VD
Sbjct: 835 IEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKVD 887
>gi|197118260|ref|YP_002138687.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
bemidjiensis Bem]
gi|197087620|gb|ACH38891.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter bemidjiensis Bem]
Length = 894
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L L L I + IS+ + DVFYV
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 TDINGQKIGDQATISYIK 91
DI GQKI + + I+
Sbjct: 868 KDIFGQKIMNPGKLEEIR 885
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++Y D+ GLL IT L GL I ++IST +V D F+V D G + +P ++
Sbjct: 824 IDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGKLEE 883
Query: 387 IQHQI 391
I+ ++
Sbjct: 884 IRKEL 888
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
V DN++ + TVI V + ++ G+L +++ DL + + KA IS+D ++D FYVTD
Sbjct: 772 VEFDNEISSNYTVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDK 831
Query: 77 NGQKIGDQATISYIKTTV 94
N KI +Q I IK ++
Sbjct: 832 NYHKITEQTFIDKIKFSL 849
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
++++T+D+ GLL I + + G+ +++A+IST +V D+F+VTD + + + + +D
Sbjct: 785 IDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDKNYHKITEQTFIDK 844
Query: 387 IQHQIGRTI 395
I+ + I
Sbjct: 845 IKFSLMEVI 853
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++DVFYV
Sbjct: 846 PTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYV 905
Query: 74 TDINGQKIGDQA 85
D+ G K ++
Sbjct: 906 KDMFGMKFHSES 917
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 36 NRHGIL--LEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTT 93
+ HGI L LV N+V + Y S DG Y VF++ D +G +QA + ++
Sbjct: 758 DHHGIFSRLAGALALVGANVVDARTYTSKDG-YATAVFWIQDNDGNPF-EQARLPRLRQM 815
Query: 94 V------ETNA-SFLNS-----MRSSVGVVP---------SKEYTSIELTGTDRPGLLSE 132
+ E A L+S R S VP S+ +T IE+ DRPGLL +
Sbjct: 816 IDKILRGEMGARQALDSRDKIKKRESKFRVPTSISFDNEGSEIFTIIEVDTRDRPGLLYD 875
Query: 133 VSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
++ VL + S+ +A+I T+ A+ + +VKD + KR KKL
Sbjct: 876 LTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFGMKFHSESKRRTLEKKL 926
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR+L + I A+I+T G +V D F+V D G
Sbjct: 862 IEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFG 910
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 23/200 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
TD G+ S ++ L + +VV A +T + A A+ ++D + G E Q RL ++++
Sbjct: 757 TDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQD-NDGNPFE-QARLPRLRQ 814
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ +LR GE Q L + RD + + ++ +
Sbjct: 815 MIDKILR-------------------GEMGARQALDS-RDKIKKRESKFRVPTSISFDNE 854
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
+T + + ++DRP LL+D L + + T + +Y+K + G
Sbjct: 855 GSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFGMKFH 914
Query: 303 SEAERQRVMACLEAAIERRA 322
SE++R+ + L AI++ A
Sbjct: 915 SESKRRTLEKKLREAIDQGA 934
>gi|87307240|ref|ZP_01089385.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
gi|87289980|gb|EAQ81869.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
Length = 882
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V IDN E ++++V + NR G+L + + + L L ++ A I++ ++DVFYV
Sbjct: 790 PTEVKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYV 849
Query: 74 TDINGQKIGDQATISYIK 91
+D G+KI D+ + I+
Sbjct: 850 SDEAGEKIEDEQRLQEIR 867
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 315 EAAIERRASEGLEL-ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTD 373
E I+ SE + E++ +R GLL I+R + + GL + A+I+T +V D F+V+D
Sbjct: 792 EVKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSD 851
Query: 374 ASGNPVD 380
+G ++
Sbjct: 852 EAGEKIE 858
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L + ++ I A I++ G ++D FYV
Sbjct: 837 PTNISFDNDGSEIYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYV 896
Query: 74 TDINGQKIGDQA 85
DI G K +A
Sbjct: 897 KDIVGLKYHSEA 908
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWTHN-ARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PGL S ++ L + +VV A +T N A A+ V+D + G E RL +++K+
Sbjct: 749 DHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQD-NDGNPYE-AARLPRLRKM 806
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ LR + + L + ++ + +R F+ +++++ D S
Sbjct: 807 IERTLRGE---------VVAKDALKDKDKIKKR---ERAFKVPTNISFDN-------DGS 847
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
+ YT + + ++DR LL+D L + + + T + +Y+K + G S
Sbjct: 848 E-IYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDIVGLKYHS 906
Query: 304 EAERQRVMACLEAAIERRASEGLE 327
EA+R A LE + ++G E
Sbjct: 907 EAKR----AGLERKLREAIAQGAE 926
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 853 IEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDIVG 901
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 36/185 (19%)
Query: 235 PHVTILDCSDRDY---TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQE 290
P V I + + R++ T + I + D+ TV + + ++ ++T +
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 291 YYIKHVDGFPISSEAER-QRVMACLEAA----------IERRASEGLE------------ 327
Y + DG PI ER + + L A I+R L+
Sbjct: 749 YIVLDADGTPIGDNRERIEEIRQGLIDAVRNPDEYLTIIQRHVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ DR GLL+ + ++ + L ++ A+I+T+G +V+D FFVT+A P+
Sbjct: 809 DTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPL 868
Query: 380 -DPKI 383
DP++
Sbjct: 869 SDPQL 873
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T+I++ + +R G+L V Q + +L + A I++ G + DVF+V
Sbjct: 801 PPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 TDINGQKIGD 83
T+ + Q + D
Sbjct: 861 TNADNQPLSD 870
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDND ATV++ +R G+L + + L D L I A+I G +D FYV
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DINGQKIGD 83
G K+ D
Sbjct: 894 TTEGGKVTD 902
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 26 HATVIQVDSVNRHGILLEVIQFLVDL--NLVITKAYISSDGGYLMDVFYVTDINGQKIG- 82
+A + + + +R G+ ++ + L N+V + + S G L DVFYV D+ G G
Sbjct: 734 NAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQAL-DVFYVQDVTGAPFGC 792
Query: 83 -------------------DQATISYIKTTVETNAS-FLNSMRSSVGVVPSKEYTSIELT 122
D + + + +T A+ F + ++ S + T +E +
Sbjct: 793 ENPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEAS 852
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
G DRPGLL ++ L D + S+ SA I + RA +V+ G + +K
Sbjct: 853 GRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKVTDTRK 905
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 33/163 (20%)
Query: 250 VTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYIKHVDGFPISSEAER- 307
V I +KDR L D ++ + V V T R +A +Y++ V G P E R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 308 -QRVMACLEAAIE--------RRASEGLE----------------------LELYTDDRF 336
+R+ LEAA + RR SE +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
GLL + + L + L I+ A I G + D F+V G V
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKV 900
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 28/197 (14%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSS- 167
V P + + DR GL ++++ ++ L +VV A ++T +A + +V+D +
Sbjct: 729 VRPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGA 788
Query: 168 --GCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFER 225
GC E+ + L + L + L G + ++++ R E+
Sbjct: 789 PFGC--ENPRALRR----LADALEAAG--KGDALAVEP----------------RRGSEQ 824
Query: 226 LDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM 285
+ P VTI + + D T V +DRP LL L D + +
Sbjct: 825 TRAAAFAIAPSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGE 884
Query: 286 EAYQEYYIKHVDGFPIS 302
A +Y++ +G ++
Sbjct: 885 RAVDAFYVQTTEGGKVT 901
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 821 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYV 880
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 881 KDMFGLKF 888
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
+D PG+ S ++ L+ + +VV A +T + A A ++D + G E Q RL +++
Sbjct: 732 SDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQD-ADGSPYE-QNRLGRLRD 789
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L G+++ +S ++ ER + +T +
Sbjct: 790 MIRKTL--MGEVKPREAILSKGKIKKRER------------------AFTVPTSITFDNE 829
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF--- 299
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 830 GSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFGLKFY 889
Query: 300 -PISSEAERQRVMACLEAAIERRAS 323
P + +R+ A +EA +R A
Sbjct: 890 TPSKQKTLEKRLRAAMEAGAKRIAQ 914
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L E + I A I+T G +V DTF+V D G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFG 885
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 33/177 (18%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVT--GRMEAYQEYY 292
P V I + R T + I + DR L L + + ++T G M A Y
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGM-AVNTYQ 746
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIERRASEGLE------------------------- 327
+ DG PI + + +CL A + A E ++
Sbjct: 747 VLDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEP 806
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+ L T DR GLL+++ + +E G+ ++ A+I+T+G +V D FF+T+ P+
Sbjct: 807 NRRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIATVGAEVDDVFFITNDDETPI 863
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P VVI T I + + +R + + L + L I A I +++GG ++ + V
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQV 747
Query: 74 TDINGQKIGDQATISYIKTTVETNAS-------------------FLNSMRSSVGVVPSK 114
D +G I D + I++ + + + F R +
Sbjct: 748 LDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPN 807
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA 154
T + L DRPGLL+EV AV + + +A+I T A
Sbjct: 808 RRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIATVGA 847
>gi|395771759|ref|ZP_10452274.1| PII uridylyl-transferase [Streptomyces acidiscabies 84-104]
Length = 813
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + + HATVI+V + + G+L + L D + + ++S+ G +D FYV
Sbjct: 728 PPRVTVASAASRHATVIEVRAQDAPGLLFRIGAALEDSGVRVRSMHVSTLGANAVDAFYV 787
Query: 74 TDINGQKI-GDQA 85
T +G + GD+A
Sbjct: 788 TSASGAPLPGDEA 800
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I L + G+ +R +ST+G D F+VT ASG P+
Sbjct: 744 IEVRAQDAPGLLFRIGAALEDSGVRVRSMHVSTLGANAVDAFYVTSASGAPL 795
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TV+++++ +R +L + L + L++ A+I++ G D FYVT
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DINGQKIGDQATISYIK 91
D+ G+KI I I+
Sbjct: 884 DLLGEKITAAPRIKAIE 900
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 58 AYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYT 117
A + G L D +++ + + I+ + ++ +AS + S P++ T
Sbjct: 676 ALVEKVGAILGDAYWIAE-------PEDVIA--RNLIQLDASDDEPLSISTEYYPARGAT 726
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+ + +D PGL ++ + +++ A I H R +G A+++
Sbjct: 727 LVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTTR-----------TGRAVDN---- 769
Query: 178 LKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHV 237
++ L G LR ++I +A L ++ L A D R ++ RP V
Sbjct: 770 FLVQDPLGRPFMEYGQLRRLELTIENA--LANRIKILPQLVAKPD-ARPRADAFDVRPRV 826
Query: 238 TILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVD 297
+ + +T V I ++DRP LL L + + +V+ + T A +Y+ +
Sbjct: 827 LFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVTDLL 886
Query: 298 GFPISSEA-----ERQRVMACLEAAIE 319
G I++ ER+ + A E ++E
Sbjct: 887 GEKITAAPRIKAIERRLLEATSEPSLE 913
>gi|399064503|ref|ZP_10747442.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
gi|398030747|gb|EJL24152.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
Length = 917
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TV++V+S +R +L + L + L++ A+I++ G D FYVT
Sbjct: 824 PRVLFDNKASNRFTVVEVNSRDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DINGQKI 81
D+ G+K+
Sbjct: 884 DLLGEKL 890
>gi|455651557|gb|EMF30283.1| PII uridylyl-transferase [Streptomyces gancidicus BKS 13-15]
Length = 808
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + HATVI+V + + G+L + + L D + + A++S+ G +D FYV
Sbjct: 723 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 782
Query: 74 TDINGQKIGDQATISYIKTTVET 96
T G + + ++ + E
Sbjct: 783 TQERGVPLPGEEAVAVARKLEEA 805
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I R L + G+ +R A +ST+G D F+VT G P+
Sbjct: 739 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVTQERGVPL 790
>gi|374299916|ref|YP_005051555.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
gi|332552852|gb|EGJ49896.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
Length = 940
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 307 RQRVMACLEAAIERRASEGLE-LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKV 365
R AC E ++ AS+ LE+ DR G L ++ L GL + A+I TMG +V
Sbjct: 849 RTGAGACPEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVFLAKIDTMGERV 908
Query: 366 KDTFFVTDASGNPVDPKIVDSIQHQI 391
D FFV D G +DP D + +
Sbjct: 909 ADIFFVRDGEGQKLDPDRADEVMQAL 934
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V +DN+ + TV++V + +R G L E+ L L L + A I + G + D+F+V
Sbjct: 856 PEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVFLAKIDTMGERVADIFFVR 915
Query: 75 DINGQKI 81
D GQK+
Sbjct: 916 DGEGQKL 922
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 23/139 (16%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDIN--------------GQKIGDQATISYIKTT 93
L LN++ + + SDG ++D+F + + G K + +
Sbjct: 779 LHGLNILHAEVFTWSDG-TVLDIFTLAEPPDRLRPEEVFERVRLGIKNALTGKLKLDERL 837
Query: 94 VETNASFLNSMRSSVGVVP--------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVV 145
E S LN R+ G P S YT +E+ DRPG L E++ L L SV
Sbjct: 838 AERRRSPLNRCRTGAGACPEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVF 897
Query: 146 SAEIWTHNARAAALLHVKD 164
A+I T R A + V+D
Sbjct: 898 LAKIDTMGERVADIFFVRD 916
>gi|354598884|ref|ZP_09016901.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
gi|353676819|gb|EHD22852.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
Length = 894
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQ 289
+S+P V I + R T + IR +DRP LF TV D + + H + T R A
Sbjct: 693 SSKPLVLISHQASRGGTEIFIRCQDRP-YLFATVAGELDRRNLSVHDAQIFTSRDGMAMD 751
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIER--------RASEGLE-------------- 327
+ + DG P++ + A +A +R R+S L
Sbjct: 752 TFIVLEPDGSPLAQDRHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSFLPTH 811
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
+EL D+ GLL+ I I + L + A IST+G +V+D F + D+ + P
Sbjct: 812 TDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSERRALKP 871
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 872 ELRVKLQQRL 881
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 20/195 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V+I + T I + +R + V L NL + A I +S G MD F V
Sbjct: 696 PLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 TDINGQKIGD--QATISYIKTTVETNASFLN-------------SMRSSVGVVPSK--EY 116
+ +G + T Y T + + S+ + V +P+
Sbjct: 756 LEPDGSPLAQDRHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSFLPTHTDRR 815
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
+ +EL+ D+PGLL+ + + DL+ S+ A I T R L + D S A++ + R
Sbjct: 816 SYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SERRALKPELR 874
Query: 177 LLKIKKLLCNVLRTN 191
+K+++ L L N
Sbjct: 875 -VKLQQRLTEALNPN 888
>gi|294635116|ref|ZP_06713627.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451965796|ref|ZP_21919052.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
gi|291091493|gb|EFE24054.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451315368|dbj|GAC64414.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME-AYQEYYI 293
P V + + R T + I S DRP L L V+ + T R A + +
Sbjct: 689 PLVLVSQHASRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFVV 748
Query: 294 KHVDGFPIS----SEAERQRVMACLEAAIE----RRASEGLE------------------ 327
DG P++ S R A +A+ + R AS L
Sbjct: 749 LEPDGSPLALDRHSTIRRALEQALTQASYQPPRVRHASARLRHFTVPTAVSFLPAHNTRR 808
Query: 328 --LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVD 385
+EL DR GLL+ I I E GL + A I+T+G +V+D F + D + P++
Sbjct: 809 SYMELVALDRPGLLARIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPEMQH 868
Query: 386 SIQHQIGRTIL 396
+ ++ T+L
Sbjct: 869 ELAQRLTETLL 879
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PGL S ++ L + ++V A +T + A A+ V+D G E + RL +++++
Sbjct: 749 DHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQD-GDGNPYE-ESRLQRLRQM 806
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ LR + + L + ++ + +R F R+D +T +
Sbjct: 807 IVRTLRGE---------VVAREALKDKDKIKKR---ERAF-RVDT-------KITFDNDG 846
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
YT + + ++DRP LL+D L + + + T + +Y+K + G S
Sbjct: 847 SEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVGLKYYS 906
Query: 304 EAERQRVMACLEAAIERRASEGL 326
EA+RQ + L AI + A +
Sbjct: 907 EAKRQSLERKLREAIAQGAQRAI 929
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
++ DND E T+I+VD+ +R G+L ++ + L + ++ I A I++ G ++D FYV D
Sbjct: 839 KITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKD 898
Query: 76 INGQKIGDQA 85
+ G K +A
Sbjct: 899 MVGLKYYSEA 908
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVG 901
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + ATVI+V S + G+L + + L D ++++ A++S+ G +D FYV
Sbjct: 730 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYV 789
Query: 74 TDINGQKI-GDQA 85
T G + GD+A
Sbjct: 790 TGPEGAPLPGDEA 802
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ + D GLL I R L + + +R A +ST+G D F+VT G P+ +S+
Sbjct: 746 IEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 805
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 806 ARKLEETL 813
>gi|339053462|ref|ZP_08648168.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
gi|330721330|gb|EGG99408.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
Length = 349
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR GLL+ I RI E L +++A+I+T+G +V+D FF+T P+ D K+ D+
Sbjct: 263 VEVVTPDRPGLLARIGRIFLENELELQKAKIATLGERVEDVFFITGKDLKPLGDSKLHDA 322
Query: 387 IQHQI 391
++ +I
Sbjct: 323 LKVEI 327
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V I +D + T+++V + +R G+L + + ++ L + KA I++ G + DVF++
Sbjct: 247 PTQVSIYDDEIQGYTIVEVVTPDRPGLLARIGRIFLENELELQKAKIATLGERVEDVFFI 306
Query: 74 TDINGQKIGDQATISYIK----TTVETNASFLNSMRSSVGVV 111
T + + +GD +K T ++ +A F +S +
Sbjct: 307 TGKDLKPLGDSKLHDALKVEICTQLDESAQFAPDKKSGSSIA 348
>gi|162451413|ref|YP_001613780.1| protein-PII uridylyltransferase [Sorangium cellulosum So ce56]
gi|161161995|emb|CAN93300.1| probable protein-PII uridylyltransferase [Sorangium cellulosum So
ce56]
Length = 953
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 21 NDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQK 80
+D H TVI+V + +R G+L + L L L I+ A I+++G + DVFYV+D +G K
Sbjct: 866 DDRASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGTK 925
Query: 81 IGD 83
I +
Sbjct: 926 IAN 928
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 317 AIERRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+I+ RAS +E+ T DR GLL I+ L + GL I A+I+T G +V D F+V+DA G
Sbjct: 864 SIDDRASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADG 923
Query: 377 NPV 379
+
Sbjct: 924 TKI 926
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
+ +T IE+ DRPGLL +S L L S+ A+I T R A + +V D + G I
Sbjct: 869 ASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSD-ADGTKIA 927
Query: 173 DQKRLLKIKKLLCNVLR 189
+ KR ++++ L VL+
Sbjct: 928 NGKRTQEVEERLHAVLQ 944
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L GL +R A +ST+G D F+VTD +G P+ P +
Sbjct: 380 IEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYVTDPTGAPLAPMRAAEV 439
Query: 388 QHQI 391
++
Sbjct: 440 AREV 443
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV I + ATVI+V + + G+L + + L L + A++S+ G +D FYV
Sbjct: 364 PPRVTIAPGSSQLATVIEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYV 423
Query: 74 TDINGQKIG 82
TD G +
Sbjct: 424 TDPTGAPLA 432
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 888 KDMFGLKF 895
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + A A+ ++D + G E RL +++
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQD-ADGHPFE-ADRLPRLRN 796
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G++ P +I S L R + H+T +
Sbjct: 797 MIQKTLK--GEV-VPREAIKSRDKLKKRER-----------------AFRVPTHITFDND 836
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + T + +Y+K + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFH 896
Query: 303 SEAERQRVMACLEAAIERRASEGLE 327
S+++R + L AAIE EG+E
Sbjct: 897 SDSKRAALERKLRAAIE----EGVE 917
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 74 TDINGQKIGDQA 85
D+ G K ++
Sbjct: 888 KDMFGLKFHSES 899
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + A A+ ++D + G E RL +++
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQD-ADGHPFESD-RLPRLRN 796
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G++ P +I S L R + H+T +
Sbjct: 797 MIQKTLK--GEV-VPREAIKSRDKLKKRER-----------------AFRVPTHITFDND 836
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + T + +Y+K + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFH 896
Query: 303 SEAERQRVMACLEAAIERRASEGLE 327
SE++R + L AAI +EG+E
Sbjct: 897 SESKRAALERKLRAAI----AEGVE 917
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-PK 382
E+++ T DR GLL+DIT + + + A +ST+G +V+D F+V + G+ VD PK
Sbjct: 790 EIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQGHAVDSPK 846
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
I DQ ++ ++LRT LR S +AR R+H+ R +L ++
Sbjct: 726 ILDQHNGARLDHWSLDMLRTR--LRDRLQSTDAART-----RIHR-----RSPPQLASID 773
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
++ + L R T + I +KDRP LL D D+ + H V T
Sbjct: 774 VATQ--IQFLSDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDA 831
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRA 322
+Y+ G + S + A L AAI R+
Sbjct: 832 FYVVERQGHAVDSPKRCAEIEAALRAAIHSRS 863
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFL--VDLNL------VITKAYISSDGGY 66
P + I N + A I V + N HG ++ L LN+ VIT +
Sbjct: 661 PVLWISNTPDQDAIQILVLTENSHGQFARIVTELDRSGLNVQSANMTVITPTAAHLEKRA 720
Query: 67 LMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMR-----------SSVGVVPSKE 115
L + F + NG ++ D ++ ++T + ++ R +S+ V +
Sbjct: 721 LFEFFILDQHNGARL-DHWSLDMLRTRLRDRLQSTDAARTRIHRRSPPQLASIDVATQIQ 779
Query: 116 Y--------TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+ T I++ DRPGLL++++ DL S+ A + T R +V ++
Sbjct: 780 FLSDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVER-Q 838
Query: 168 GCAIEDQKRLLKIKKLL 184
G A++ KR +I+ L
Sbjct: 839 GHAVDSPKRCAEIEAAL 855
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +T L + GL + A + T+G D F+V+D SG P+DP +
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDPDQRERA 766
Query: 388 QHQIGRTILQVKGNLNTPPKL 408
+ + + V+G+ P L
Sbjct: 767 ERAL---VAAVRGDAPDPAAL 784
>gi|404493132|ref|YP_006717238.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V + TV+ V + + G+L + + L DL L + A IS+ + D FYV
Sbjct: 817 PSRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYV 876
Query: 74 TDINGQKIGDQATISYIKTTV 94
DI QKI D + +++ +
Sbjct: 877 KDIFSQKITDPDRMEEVRSQL 897
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
L+++T D G+L I R LR+ GL + A+IST +V DTF+V D + DP ++
Sbjct: 833 LDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYVKDIFSQKITDPDRMEE 892
Query: 387 IQHQI 391
++ Q+
Sbjct: 893 VRSQL 897
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 5 FAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDG 64
AK + P R+ +DND T+I+V + +R GIL +++ +N+ + A IS+ G
Sbjct: 748 LAKSVPSRVPTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTG 807
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVE 95
+ DVF+V G +I D + + + +E
Sbjct: 808 ESVFDVFHVEGPEGGRIEDHIHLRELISALE 838
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DR GLL+DI R R L + A IST+G V+D FF+ D G P+ + V+
Sbjct: 819 VEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFLVDRQGLPLMNSSDVER 878
Query: 387 IQHQIGRTI 395
+Q+++ TI
Sbjct: 879 LQNELKSTI 887
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + + ND+ H TV++V + +R G+L ++ + L L + A IS+ G ++ DVF++
Sbjct: 803 PAEITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFL 862
Query: 74 TDINGQKIGDQATISYIKTTVETNAS 99
D G + + + + ++ +++ S
Sbjct: 863 VDRQGLPLMNSSDVERLQNELKSTIS 888
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 853 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYV 912
Query: 74 TDINGQK 80
D+ G K
Sbjct: 913 KDMFGLK 919
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D F+V D G
Sbjct: 869 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDMFG 917
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 844 PTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYV 903
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K ++ +++
Sbjct: 904 KDMFGLKYHSKSKQDFLE 921
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V DTF+V D G
Sbjct: 860 IEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYVKDMFG 908
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V ++ + V+ L N + A + +S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G+ I + + K T ++T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL++V A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQALR 861
>gi|188533034|ref|YP_001906831.1| PII uridylyl-transferase [Erwinia tasmaniensis Et1/99]
gi|188028076|emb|CAO95933.1| [Protein-PII] uridylyltransferase [Erwinia tasmaniensis Et1/99]
Length = 885
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
S+P + + + R T + I S DRP L L V+ + T R A +
Sbjct: 688 SQPLILVSPLATRGGTEIFIWSPDRPYLFAAVAGELDKRNLSVHDAQIFTSRDGMAMDTF 747
Query: 292 YIKHVDGFPISS---EAERQRVMACLEAAI---------ERRASEGLE------------ 327
+ DG P+++ EA R LE AI RR S L+
Sbjct: 748 IVLEPDGSPLATDRHEATRH----ALEQAICQTDWQPPRTRRQSARLKHFNVETSVNFLP 803
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL DR GLL+ + + + G+ + A IST+G +V+D F + D+ +
Sbjct: 804 THTDRRTYLELVALDRPGLLACVGEVFADLGVSLHGARISTIGERVEDLFILADSERRAL 863
Query: 380 DPKIVDSIQHQI 391
D ++ + +Q ++
Sbjct: 864 DTELREVLQQRL 875
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 835 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYV 894
Query: 74 TDINGQK 80
D+ G K
Sbjct: 895 KDMFGLK 901
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
TD PG+ + ++ L + +VV A +T + ++D D RL ++++
Sbjct: 746 TDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDADGNPY--DIARLPRLRQ 803
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G+++ S +V E+ + H+T +
Sbjct: 804 MIGKTLK--GEIKAREELKSRDKVKKREK------------------AFRVPTHITFDNE 843
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + + T + +Y+K + G
Sbjct: 844 GSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 903
Query: 303 SEAER----QRVMACLEAAIER 320
SE+++ +R+ + A +ER
Sbjct: 904 SESKQKTLEKRLRTAIAAGVER 925
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDING------------QKIGDQATISYIKTTVE 95
LV N+V ++Y + DG Y+ F++ D +G Q IG + IK E
Sbjct: 761 LVGANVVDARSYTTKDG-YVTGAFWIQDADGNPYDIARLPRLRQMIG-KTLKGEIKAREE 818
Query: 96 TNASFLNSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVS 146
+ R VP S+ YT IE+ DRPGLL +++ L + + + +
Sbjct: 819 LKSRDKVKKREKAFRVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIAN 878
Query: 147 AEIWTHNARAAALLHVKD 164
A I T+ + +VKD
Sbjct: 879 AVIATYGEQVVDTFYVKD 896
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L E + I A I+T G +V DTF+V D G
Sbjct: 851 IEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDMFG 899
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V++ +R +L ++ L + L I+ A+I++ G +DVFYV+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DINGQKIGDQATISYIK 91
D+ KI +Q + I+
Sbjct: 895 DLFSHKITNQNRLKAIE 911
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V++ +R +L ++ L + L I+ A+I++ G +DVFYV+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DINGQKIGDQATISYIK 91
D+ KI +Q + I+
Sbjct: 895 DLFSHKITNQNRLKAIE 911
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 820 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYV 879
Query: 74 TDINGQK 80
D+ G K
Sbjct: 880 KDMFGLK 886
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 29/189 (15%)
Query: 4 EFAKLIRRMN----PPRVVI--DNDVCEHATVIQVDSVNRHGILLEV--IQFLVDLNLVI 55
+FA+++R ++ P VVI D D AT + GI V LV N+V
Sbjct: 694 DFAEMLRELDAKNDPGGVVIRLDPDEDRDATRACFTMWDHPGIFARVSGALALVGANVVD 753
Query: 56 TKAYISSDGGYLMDVFYVTDINGQ-------KIGDQATISYIKTTVETNASFLN----SM 104
++Y + DG Y+ D F++ D G K Q +K V + ++
Sbjct: 754 ARSYTTKDG-YVTDAFWIQDAEGHPFEASRLKRLSQMIRKTLKGEVIARDALVSRDKIKK 812
Query: 105 RSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
R VP S+ YT IE+ DRPGLL +++ L + + +A I T+ +
Sbjct: 813 REKAFRVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQ 872
Query: 156 AAALLHVKD 164
+VKD
Sbjct: 873 VVDTFYVKD 881
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V DTF+V D G
Sbjct: 836 IEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFG 884
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 27/206 (13%)
Query: 121 LTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLK 179
T D PG+ + VS L + +VV A +T + ++D + G E RL +
Sbjct: 728 FTMWDHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQD-AEGHPFE-ASRLKR 785
Query: 180 IKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTI 239
+ +++ L+ G++ +S ++ E+ + H+T
Sbjct: 786 LSQMIRKTLK--GEVIARDALVSRDKIKKREK------------------AFRVPTHITF 825
Query: 240 LDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGF 299
+ YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 826 DNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFGL 885
Query: 300 PISSEAERQRVMACLEAAIERRASEG 325
S ++++ + L AI SEG
Sbjct: 886 KYHSLSKQKTLEKRLREAI----SEG 907
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V++ +R +L ++ L + L I+ A+I++ G +DVFYV+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DINGQKIGDQATISYIK 91
D+ KI +Q + I+
Sbjct: 895 DLFSHKITNQNRLKAIE 911
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN + TVI+V++ +R +L ++ L + L I+ A+I++ G +DVFYV+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DINGQKIGDQATISYIK 91
D+ KI +Q + I+
Sbjct: 895 DLFSHKITNQNRLKAIE 911
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I+ A I++ G ++D FYV
Sbjct: 821 PTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYV 880
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 881 KDMFGLKF 888
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 84/201 (41%), Gaps = 23/201 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L+ + +VV A +T + A A ++D S G E+
Sbjct: 732 ADHPGIFARLAGALSLVGANVVDARTFTSKDGYATAAFWIQD-SEGSPYEES-------- 782
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
R P + + + L GE + + + + ++ + +N + +
Sbjct: 783 ------------RIPRLRDTIRKTLMGEVKPREAILSRGKLKKREKA-FNVPTSIAFDNE 829
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L++ + + T + +Y+K + G
Sbjct: 830 GSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFGLKFY 889
Query: 303 SEAERQRVMACLEAAIERRAS 323
+ ++++ + L AA+E A+
Sbjct: 890 TPSKQKTLERRLRAAMEDGAA 910
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L E + I A I+T G +V DTF+V D G
Sbjct: 837 IEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFG 885
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 5 FAKLIRRMNPPRVVID--NDVCEHATVIQVDSVNRHGILLEVIQFL--VDLNLVITKAYI 60
FA+L+R + + ID D AT + + GI + L V N+V + +
Sbjct: 700 FAELLRDIGDTEIRIDIHPDEDRDATRVCFALADHPGIFARLAGALSLVGANVVDARTFT 759
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTT--------VETNASFLN----SMRSSV 108
S DG Y F++ D G +++ I ++ T V+ + L+ R
Sbjct: 760 SKDG-YATAAFWIQDSEGSPY-EESRIPRLRDTIRKTLMGEVKPREAILSRGKLKKREKA 817
Query: 109 GVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAAL 159
VP S+ YT IE+ DRPGLL +++ L++ + + SA I T+ +
Sbjct: 818 FNVPTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDT 877
Query: 160 LHVKD 164
+VKD
Sbjct: 878 FYVKD 882
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
++V DNDV + T++ + + +R G+L ++++ L + +A IS+D ++D FY+ D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 76 INGQKIGDQATISYIK 91
+G+KI DQ + I+
Sbjct: 836 KHGKKITDQRVLDNIR 851
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++Y DR GLL DI R + L + RA+IST +V D+F++ D G + D +++D+
Sbjct: 790 VDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVDKHGKKITDQRVLDN 849
Query: 387 IQHQIGRTI 395
I+ ++ + I
Sbjct: 850 IRGELSKEI 858
>gi|406899324|gb|EKD42627.1| hypothetical protein ACD_73C00080G0001, partial [uncultured
bacterium]
Length = 757
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
++IDNDV ++TVI++ + +R G+L ++I+ L L + + IS+ + DVFYV DI
Sbjct: 669 IMIDNDVSAYSTVIEIYTHDRLGLLYDIIRTLNHLGCYVEISKISTKVEQVSDVFYVKDI 728
Query: 77 NGQKIGDQATISYIK 91
G KI + IK
Sbjct: 729 FGHKIMGADKLKAIK 743
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD-----PK 382
+E+YT DR GLL DI R L G + ++IST +V D F+V D G+ +
Sbjct: 682 IEIYTHDRLGLLYDIIRTLNHLGCYVEISKISTKVEQVSDVFYVKDIFGHKIMGADKLKA 741
Query: 383 IVDSIQHQI 391
I D ++H I
Sbjct: 742 IKDQLKHMI 750
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI++++ +R +L ++ L + I A++++ G +D FY+T
Sbjct: 834 PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 893
Query: 75 DINGQKIGDQATISYIKT 92
D+ G KI A S +KT
Sbjct: 894 DLTGDKI---AAPSRLKT 908
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLV--DLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQ 84
AT++ V + + G+ + + N++ + + + DG +D F V D G+ +
Sbjct: 735 ATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDG-MALDNFLVQDPFGRPFDES 793
Query: 85 ATISYIKTTVETNASFLNSM-------------RSSVGVVP--------SKEYTSIELTG 123
A +S +K +E + M + + P S +T IE+
Sbjct: 794 AQLSRLKQAIEDALANRGKMIDRLMAKPLTRPRAEAFAIAPNVLIDNKASNRFTVIEINA 853
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRP LL +++ L ++ SA + T+ RA ++ D +G I RL I++
Sbjct: 854 RDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTDL-TGDKIAAPSRLKTIERR 912
Query: 184 LCNV 187
L
Sbjct: 913 LLGA 916
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV ATVI+V + + HG+L + + L + + A+IS+ G +D FYV
Sbjct: 752 PPRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYV 811
Query: 74 TDINGQKI 81
TD +G+ +
Sbjct: 812 TDPDGEPL 819
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+ D GLL I R L G+ +R A IST+G D F+VTD G P+
Sbjct: 768 IEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYVTDPDGEPL 819
>gi|359399328|ref|ZP_09192332.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
gi|357599368|gb|EHJ61082.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
Length = 918
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TV++V++ +R +L + L + L++ A++++ G D FYVT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 75 DINGQKI 81
D+ G+K+
Sbjct: 885 DLLGEKL 891
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP------------ 112
G +D F V D G+ +++ + ++T++E N++ + + ++P
Sbjct: 765 GRAVDNFLVQDPLGRPFMEESQLERLRTSIE------NALANRIKILPQLVAKPDARPRA 818
Query: 113 ---------------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA 157
S +T +E+ DRP LL+ ++ L + V SA + T+ RAA
Sbjct: 819 DAFEVRPRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAA 878
Query: 158 ALLHVKD 164
+V D
Sbjct: 879 DTFYVTD 885
>gi|334142818|ref|YP_004536026.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
gi|333940850|emb|CCA94208.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
Length = 918
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TV++V++ +R +L + L + L++ A++++ G D FYVT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 75 DINGQKI 81
D+ G+K+
Sbjct: 885 DLLGEKL 891
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVP------------ 112
G +D F V D G+ +++ + ++T++E N++ + + ++P
Sbjct: 765 GRAVDNFLVQDPLGRPFMEESQLERLRTSIE------NALANRIKILPQLVAKPDARPRA 818
Query: 113 ---------------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAA 157
S +T +E+ DRP LL+ ++ L + V SA + T+ RAA
Sbjct: 819 DAFEVRPRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAA 878
Query: 158 ALLHVKD 164
+V D
Sbjct: 879 DTFYVTD 885
>gi|254513841|ref|ZP_05125902.1| protein-P-II uridylyltransferase [gamma proteobacterium NOR5-3]
gi|219676084|gb|EED32449.1| protein-P-II uridylyltransferase [gamma proteobacterium NOR5-3]
Length = 889
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP-VDPKIVDS 386
LE+ + DR GLL+ I + E+G+ A+I T+G +V+D FF+TD P VD +
Sbjct: 815 LEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFITDMQQQPIVDEALAQQ 874
Query: 387 IQHQIGRTILQVKGNLNTP 405
IQ + ++ L+ P
Sbjct: 875 IQ-------VAIRNKLDAP 886
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 22 DVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKI 81
D +V++V S++R G+L + + V+ ++ A I + G + DVF++TD+ Q I
Sbjct: 807 DAARKVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFITDMQQQPI 866
Query: 82 GDQATISYIKTTV 94
D+A I+ +
Sbjct: 867 VDEALAQQIQVAI 879
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 20/137 (14%)
Query: 48 LVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQATISYI------KTTVETNA-- 98
L LNL + A I G +D +YV D +G+ + D + +I K + ETN
Sbjct: 724 LEQLNLSVHDARIYHGRDGMSLDTYYVLDSSGESVDDIDRLRHITRYLSDKLSPETNTTA 783
Query: 99 -----------SFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
SF +++ V +++ + +E+ DRPGLL+ + V + +A
Sbjct: 784 ITSRLTPRRVRSFRLDTETNMRVDAARKVSVLEVISLDRPGLLARIGEVFVEFGVICEAA 843
Query: 148 EIWTHNARAAALLHVKD 164
+I T R + + D
Sbjct: 844 KIQTLGERVEDVFFITD 860
>gi|333908996|ref|YP_004482582.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
gi|333479002|gb|AEF55663.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
Length = 897
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DR GLL+ I + + + + +A+I+T+G +V+DTF++TD G + DP+ +D
Sbjct: 821 LEVTAPDRPGLLALIGQFFMNHNIMLHKAKIATLGERVEDTFYITDDQGELISDPQRMDK 880
Query: 387 I 387
I
Sbjct: 881 I 881
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 51 LNLVITKAYIS-SDGGYLMDVFYVTDINGQKIG---DQATISYIKTTV----ETNASF-- 100
L L I A IS + Y +D F V D N D+ I IK T+ E +S+
Sbjct: 730 LGLTILDAKISHTSDNYTLDSFVVMDSNEADKNLYLDKQRIDLIKDTLMEQLENPSSYGS 789
Query: 101 ------------LNSMRSSVGVVPSKE-YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
NS ++ V ++E ++++E+T DRPGLL+ + + + + A
Sbjct: 790 VVQRHTPRILKIFNSPSTAHFVSQAEEVWSALEVTAPDRPGLLALIGQFFMNHNIMLHKA 849
Query: 148 EIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGD 193
+I T R ++ D G I D +R+ KI CN+L+ D
Sbjct: 850 KIATLGERVEDTFYITD-DQGELISDPQRMDKI----CNLLKEKID 890
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGD 83
+ ++V + +R G+L + QF ++ N+++ KA I++ G + D FY+TD G+ I D
Sbjct: 819 SALEVTAPDRPGLLALIGQFFMNHNIMLHKAKIATLGERVEDTFYITDDQGELISD 874
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+++VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 826 PTHITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYV 885
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 886 KDMFGLKL 893
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 23/200 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
+D PG+ S ++ L + +VV A +T + A A+ V+D S G E K
Sbjct: 737 SDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQD-SEGHPYEATK------- 788
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
P + + L GE L DRD + + H+T +
Sbjct: 789 -------------LPRLRGMIEKTLKGEVVARDAL-KDRDKIKKREREFRFPTHITFDNE 834
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT V + ++DRP LL+D L + + T + +Y+K + G +
Sbjct: 835 GSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFGLKLH 894
Query: 303 SEAERQRVMACLEAAIERRA 322
S ++ + L AI R A
Sbjct: 895 SGQRQESLEKRLRDAIIRGA 914
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 842 VEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFG 890
>gi|417949099|ref|ZP_12592238.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
gi|342808707|gb|EGU43851.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
Length = 873
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
L+R +P P V+I T + V ++ + V+ L N + A + +S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G I + + K T V+T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGNAIDEARHKAVAKHLTHVLADGRPTKVKTRRTPRNLQHFKVKTLVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL++V A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQSLR 861
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 832 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 74 TDINGQK 80
D+ G K
Sbjct: 892 KDMFGLK 898
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L E + I A I+T G +V DTF+V D G
Sbjct: 848 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 896
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDING-----------QKIGDQATISYIKTTVET 96
LV N+V ++Y + DG + D +++ D +G +K+ ++ + + TT
Sbjct: 758 LVGANVVDARSYTTKDG-LVTDAYWIQDADGNPYDVSRLPRLRKMIERTLMGEVVTTEAM 816
Query: 97 NASFLNSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
+ R VP S+ YT IE+ DRPGLL +++ L + + + +A
Sbjct: 817 KSRDKVKKRERAFKVPTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANA 876
Query: 148 EIWTHNARAAALLHVKD 164
I T+ + +VKD
Sbjct: 877 VIATYGEQVVDTFYVKD 893
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 25/204 (12%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
+D PG+ + ++ L + +VV A +T + + G D RL +++K+
Sbjct: 743 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDADGNPY-DVSRLPRLRKM 801
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+ L G++ T S +V ER + H+T +
Sbjct: 802 IERTLM--GEVVTTEAMKSRDKVKKRER------------------AFKVPTHITFDNEG 841
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
YT + + ++DRP LL D L + + + + T + +Y+K + G S
Sbjct: 842 SEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYYS 901
Query: 304 EAER----QRVMACLEAAIERRAS 323
+++ +R+ +E +ER S
Sbjct: 902 ASKQRTLERRLRTAIEQGVERAES 925
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 842 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 901
Query: 74 TDINGQK 80
D+ G K
Sbjct: 902 KDMFGLK 908
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L E + I A I+T G +V DTF+V D G
Sbjct: 858 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 906
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDING-----------QKIGDQATISYIKTTVET 96
LV N+V ++Y + DG + D F++ D +G +K+ ++ + + TT
Sbjct: 768 LVGANVVDARSYTTKDG-LVTDAFWIQDADGNPYDATRLPRLRKMIERTLMGEVVTTEAI 826
Query: 97 NASFLNSMRSSVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
+ R VP S+ YT IE+ DRPGLL +++ L + + + +A
Sbjct: 827 KSRDKVKKRERAFKVPTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANA 886
Query: 148 EIWTHNARAAALLHVKD 164
I T+ + +VKD
Sbjct: 887 VIATYGEQVVDTFYVKD 903
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
+D PG+ + ++ L + +VV A +T + ++D D RL +++K
Sbjct: 753 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDADGNPY--DATRLPRLRK 810
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L G++ T S +V ER + H+T +
Sbjct: 811 MIERTLM--GEVVTTEAIKSRDKVKKRER------------------AFKVPTHITFDNE 850
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL D L + + + + T + +Y+K + G
Sbjct: 851 GSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 910
Query: 303 SEAERQRVMACLEAAIER 320
S ++++ + L AAIE+
Sbjct: 911 SASKQRNLERRLRAAIEQ 928
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 825 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYV 884
Query: 74 TDINGQKI 81
D+ G K
Sbjct: 885 KDMFGLKF 892
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG-NPVDPKIVDS 386
+E+ T DR GLL D+TR L E + I A I+T G +V DTF+V D G P +
Sbjct: 841 IEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFGLKFFTPSKQKT 900
Query: 387 IQHQIGRTILQVK 399
++H++ I + K
Sbjct: 901 LEHRLRDAIEEGK 913
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
+D PG+ + ++ L+ + +VV A +T + A A+ ++D G E + RL +++
Sbjct: 736 SDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQDMD-GTPFE-ESRLPRLRD 793
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L G+++ P +I S ++ F R ER V + +T +
Sbjct: 794 MIRKTLW--GEVK-PREAIHS-----------RLRFKKR--ERAFSVPTS----ITFDNE 833
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L++ + + T + +Y+K + G
Sbjct: 834 GSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFGLKFF 893
Query: 303 SEAERQRVMACLEAAIE 319
+ ++++ + L AIE
Sbjct: 894 TPSKQKTLEHRLRDAIE 910
>gi|307129818|ref|YP_003881834.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
gi|306527347|gb|ADM97277.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
Length = 893
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDV 70
+N P V+I + T I + S +R + V L NL + A I +S G MD
Sbjct: 693 VNKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVVPSK- 114
F V + +G + +QA Y V +S L S+ + VG +P+
Sbjct: 753 FIVLEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHT 812
Query: 115 -EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
+ +EL D+PGLL+ V V DL+ S+ A I T R L + D S A+
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILAD-SERRALSP 871
Query: 174 QKRLLKIKKLLCNVLRTN 191
+ R LK+++ L L N
Sbjct: 872 ELR-LKLQQRLTEALDPN 888
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 31/193 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V I + R T + I S DRP L L V+ + T R A +
Sbjct: 694 NKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 753
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P++ + + +E A+ RR S L
Sbjct: 754 IVLEPDGSPLAPD-RHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHT 812
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
+EL D+ GLL+ + + + L + A IST+G +V+D F + D+ + P+
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSERRALSPE 872
Query: 383 IVDSIQHQIGRTI 395
+ +Q ++ +
Sbjct: 873 LRLKLQQRLTEAL 885
>gi|86146892|ref|ZP_01065211.1| PII uridylyl-transferase [Vibrio sp. MED222]
gi|85835344|gb|EAQ53483.1| PII uridylyl-transferase [Vibrio sp. MED222]
Length = 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G+ I + + K T ++T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL++V A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQALR 861
>gi|218710320|ref|YP_002417941.1| PII uridylyl-transferase [Vibrio splendidus LGP32]
gi|254798834|sp|B7VIS0.1|GLND_VIBSL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218323339|emb|CAV19516.1| [Protein-PII] uridylyltransferase [Vibrio splendidus LGP32]
Length = 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G+ I + + K T ++T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL++V A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQALR 861
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L + L + + A++++ G +D FYVT
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI +A + ++
Sbjct: 884 DLLGGKIESKARLQTLE 900
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 24/218 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + T + + TD PGL ++ + +++ A I T A + G A
Sbjct: 721 PQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 780
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQML--FADRDFERLDCV 229
++L +IK + + L H+M+ R R
Sbjct: 781 HSPEQLARIKAAIEDSLSNR----------------------HRMITKLEARPLPRTRAE 818
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P+V I + + +T + + ++DRP LLF L + V+ V T A
Sbjct: 819 AFRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVD 878
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+Y+ + G I S+A Q + L A E LE
Sbjct: 879 TFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 916
>gi|419955546|ref|ZP_14471672.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
gi|387967587|gb|EIK51886.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
Length = 114
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PP+V I ND T+I++ + +R G+L V Q + +L + A I++ G + DVF+V
Sbjct: 15 PPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFV 74
Query: 74 TDINGQKIGD 83
T+ + Q + D
Sbjct: 75 TNADNQPLSD 84
Score = 48.1 bits (113), Expect = 0.009, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKI 383
+E+ DR GLL+ + ++ + L ++ A+I+T+G +V+D FFVT+A P+ DP++
Sbjct: 31 IEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 87
>gi|218885967|ref|YP_002435288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756921|gb|ACL07820.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 967
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 9 IRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLM 68
+RR PP V IDN++ + TV++V + +R +L +V + L L L I A I++ G
Sbjct: 878 VRR--PPEVRIDNELSDFHTVVEVFAPDRPALLYDVARVLQALQLDILFAKIATLGNRTS 935
Query: 69 DVFYVTDINGQKIGDQATISYIKTTV 94
D F V + GQKI D+ + ++ +
Sbjct: 936 DSFSVRTVYGQKITDEQQMDEVRAAL 961
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L + L + + A++++ G +D FYVT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI +A + ++
Sbjct: 886 DLLGGKIESKARLQTLE 902
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 24/218 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + T + + TD PGL ++ + +++ A I T A + G A
Sbjct: 723 PQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQML--FADRDFERLDCV 229
++L +IK + + L H+M+ R R
Sbjct: 783 HSPEQLARIKAAIEDSLSNR----------------------HRMITKLEARPLPRTRAE 820
Query: 230 NYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ 289
+ P+V I + + +T + + ++DRP LLF L + V+ V T A
Sbjct: 821 AFRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVD 880
Query: 290 EYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327
+Y+ + G I S+A Q + L A E LE
Sbjct: 881 TFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 918
>gi|269101937|ref|ZP_06154634.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161835|gb|EEZ40331.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P ++I T + V S ++ + V+ L NL + A I +S GY +D F V
Sbjct: 680 PLILISKKPTRGGTEVFVYSKDKAKLFAIVVAELDKKNLSVHDAQIMNSKDGYTLDTFMV 739
Query: 74 TDINGQKIGD--QATISYIKTTVETNASFLNSMRSS------------VGVVPSK--EYT 117
D NG+ I + A IS T F R + V + +K + T
Sbjct: 740 LDPNGKAISENRHAVISKALKKALTEMKFERKKRRTRRQLLHFNVKTRVDFLATKNGKKT 799
Query: 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
+EL D PGLL+ V +V + + S+ +A+I T RA + ++ E+++ L
Sbjct: 800 MVELVALDTPGLLATVGSVFANQNLSLQAAKITTIGERAEDFFILINEQGQQLTEEEQIL 859
Query: 178 LK 179
L+
Sbjct: 860 LR 861
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 TDINGQK 80
D+ G K
Sbjct: 894 KDMFGLK 900
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L E + I A I+T G +V DTF+V D G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D D RL ++++
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY--DVSRLPRLRQ 802
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G++ S +V E+ + H+T +
Sbjct: 803 MISKTLK--GEILARDALKSRDKVKKREK------------------VFKVPTHITFDNE 842
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L++ + + + T + +Y+K + G
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 902
Query: 303 SEAERQRVMACLEAAI 318
+E++++ + L AAI
Sbjct: 903 TESKQKTLEKRLRAAI 918
>gi|317046980|ref|YP_004114628.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
gi|316948597|gb|ADU68072.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
Length = 884
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 32/195 (16%)
Query: 228 CVNYN-SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-M 285
+N++ S+P V + + R T + I S DRP L L V+ + T R
Sbjct: 681 LINHDLSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 286 EAYQEYYIKHVDGFPISSEAERQRVMACLEAAI---------ERRASEGLE--------- 327
A + + DG P++++ ++ LE AI RR S L+
Sbjct: 741 MAMDTFIVLEPDGSPLAAD-RHPMIIQALEQAITQTQWVPPRARRQSSRLKHFSVETEVN 799
Query: 328 -----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++
Sbjct: 800 FLPTHTDRRSYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSER 859
Query: 377 NPVDPKIVDSIQHQI 391
+D ++ + +Q ++
Sbjct: 860 RALDAEMRNVLQQRL 874
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 TDINGQK 80
D+ G K
Sbjct: 894 KDMFGLK 900
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L E + I A I+T G +V DTF+V D G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D D RL ++++
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY--DVSRLPRLRQ 802
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
++ L+ G++ S +V E+ + H+T +
Sbjct: 803 MISKTLK--GEILARDALKSRDKVKKREK------------------VFKVPTHITFDNE 842
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L++ + + + T + +Y+K + G
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 902
Query: 303 SEAERQRVMACLEAAI 318
+E++++ + L AAI
Sbjct: 903 TESKQKTLEKRLRAAI 918
>gi|452819635|gb|EME26690.1| hypothetical protein Gasu_56960 [Galdieria sulphuraria]
Length = 398
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 161/408 (39%), Gaps = 80/408 (19%)
Query: 25 EHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS-DGGYLMDVFYVT-DINGQKIG 82
E T + + +R G+LL++I LV NL I A I + G + D F + +G KI
Sbjct: 13 ERDTWVIIKCKDRSGLLLDIIHTLVHFNLSIHSAVIETLQDGTIQDRFGIRRKEDGSKIT 72
Query: 83 DQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTS--------IELTGTDRPGLLSEVS 134
+ ++ +E +G P + + + + +R LL ++
Sbjct: 73 HPDDLEPLRMALE----------RVIGEKPIRIFWKHNVDIFQVLHIVCPERSHLLGDLV 122
Query: 135 AVLTD-----LSCSVVSAE---IWTHNARAAALLHVKDQSSGCAIEDQKRLL----KIKK 182
+ L +C VVS++ IW C +L+ IK
Sbjct: 123 SFLESEQLLVKACEVVSSDSSDIWI-----------------CFCNQNNQLIIDHNHIKH 165
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
L+ ++ G + PS + VL+ + ++ Q L + Y R ++D
Sbjct: 166 LIDGIM---GVIEDPSKVV----VLNRKHKVAQSLHSHHH-------EYGGR---IVIDN 208
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-------MEAYQEYYIKH 295
S +T V + + DR LL+D V L+ Y + + T ++AY + I
Sbjct: 209 SSGPFTTVAVNTDDRFGLLYDLVLALSRGGYSIISANITTREDIEKPESVKAYDIFEISD 268
Query: 296 VDGFPISSEAE-----RQRVM-ACLEAAIERRASEGLELELYTDDRFGLLSDITRILREY 349
G + ++ E RQ +M AC A+ R + +EL + + IT+ LR
Sbjct: 269 GSGEKVCNDFEELNQLRQSLMDACTHPALIDRRDNHIIVELCYSQQMKCIHGITQGLRNM 328
Query: 350 GLCIRRAEI-STMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396
GL ++RA I S + D ++ S + D + I+ +I TIL
Sbjct: 329 GLAVQRAMIRSERIAFIHDKLYIRKDSTSEWDMEERKDIETKITETIL 376
>gi|149190035|ref|ZP_01868312.1| PII uridylyl-transferase [Vibrio shilonii AK1]
gi|148836065|gb|EDL53025.1| PII uridylyl-transferase [Vibrio shilonii AK1]
Length = 874
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V++ + T + V ++ + V+ L N + A I +S G+++D F V
Sbjct: 679 PLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDGFVLDTFMV 738
Query: 74 TDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVGVVPSK--EY 116
D +G I + + IK T V+T + N ++++ V +P+K +
Sbjct: 739 LDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFLPTKGKKR 798
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKR 176
T +EL D PGLL++V A L ++ +A+I T RA L + + G E+++
Sbjct: 799 TLMELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGERAEDLFILTSATGGRLSEEEQS 858
Query: 177 LLKIK 181
LK K
Sbjct: 859 QLKQK 863
>gi|152978704|ref|YP_001344333.1| PII uridylyl-transferase [Actinobacillus succinogenes 130Z]
gi|150840427|gb|ABR74398.1| metal dependent phosphohydrolase [Actinobacillus succinogenes 130Z]
Length = 858
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 33/154 (21%)
Query: 53 LVITKAYISSD-GGYLMDVFYVTDINGQKIGD---------------------QATISYI 90
L I A IS+ GY++D F VT++NG + +AT+
Sbjct: 703 LSIHSAQISTSLDGYVLDTFVVTELNGALLKSDRRRELERAITEALTYAENLKRATLHNH 762
Query: 91 KTT---VETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
K V+T FLN+ + + +T +EL D+ GLL+EVS + DL+ ++++A
Sbjct: 763 KLQPFHVKTEVRFLNTEKET--------HTEMELVALDKAGLLAEVSQIFGDLNLNLLNA 814
Query: 148 EIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIK 181
+I T +A + + + E ++ L+++
Sbjct: 815 KITTTGEKAEDFFRLTNLQNQALTESERHELEVR 848
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDS 386
E+EL D+ GLL+++++I + L + A+I+T G K +D F +T N + + +S
Sbjct: 785 EMELVALDKAGLLAEVSQIFGDLNLNLLNAKITTTGEKAEDFFRLT----NLQNQALTES 840
Query: 387 IQHQIGRTILQVKGNLNTP 405
+H++ +++K LN P
Sbjct: 841 ERHELE---VRLKSRLNLP 856
>gi|452819855|gb|EME26906.1| protein-P-II uridylyltransferase-like protein [Galdieria
sulphuraria]
Length = 290
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393
DR GLL D+T L G+ + RA + T + DTFFVTD SG+ + + + I+H I +
Sbjct: 100 DRPGLLKDLTYCLETAGITVERALVKTESQLALDTFFVTD-SGSKIAEEDFEKIEHIITQ 158
Query: 394 TILQVKGNLNTPPKLP 409
T+ KG T +P
Sbjct: 159 TLESKKGANTTINWVP 174
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
++VIDN+ + ++I V +R G+L ++ L + + +A + ++ +D F+VTD
Sbjct: 80 KIVIDNEKDFYHSIISVRCKDRPGLLKDLTYCLETAGITVERALVKTESQLALDTFFVTD 139
Query: 76 INGQKI--------------------GDQATISYI-----KTTVETNASFLNSMRSSVGV 110
+G KI G TI+++ K V+ +++ R + V
Sbjct: 140 -SGSKIAEEDFEKIEHIITQTLESKKGANTTINWVPLAGKKVYVQNRNKYVDHER-GIAV 197
Query: 111 V----PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEI 149
V S YT++ LT + PG++S+ A L L +V A +
Sbjct: 198 VTDNSSSPLYTTVTLTAPNIPGIVSQFLANLAYLELNVSFASL 240
>gi|387774206|ref|ZP_10129478.1| protein-P-II uridylyltransferase [Haemophilus parahaemolyticus
HK385]
gi|386902350|gb|EIJ67191.1| protein-P-II uridylyltransferase [Haemophilus parahaemolyticus
HK385]
Length = 848
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+++ P V++ N+ AT I + ++ + + L + I A I +S
Sbjct: 650 LLKQNQLPLVLVSNEYARGATEIFIHCEDQKQLFARIANTLSKKKISIHDAQIITSQNDL 709
Query: 67 LMDVFYVTDINGQKIGD------QATISYIKTTVET-----------NASFLNSMRSSVG 109
+ D F VT++NGQ + + Q + T +T + +F ++
Sbjct: 710 VFDSFIVTELNGQALNEIRCEQIQQALQKELTEPQTKPFVVVKKPIKHQTFKRKTKTRFL 769
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
++ T+ EL DR GLL++VS + L +++A+I T R V Q +
Sbjct: 770 ANSNQNQTAFELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGERVEDFFVVSTQENQA 829
Query: 170 AIEDQKRLLK 179
E+ K+ LK
Sbjct: 830 LSEEVKKTLK 839
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
EL+T DR GLL+ +++I + L + A+I+T+G +V+D F V+ + ++ ++
Sbjct: 779 FELFTLDREGLLAQVSQIFNQLDLVLINAKITTIGERVEDFFVVSTQENQALSEEVKKTL 838
Query: 388 Q 388
+
Sbjct: 839 K 839
>gi|284032664|ref|YP_003382595.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
gi|283811957|gb|ADB33796.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
Length = 752
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
L++ DR GLL DIT + G IR A +ST+G + D F++TD G+P+D
Sbjct: 683 LQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLD 735
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 9 IRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLM 68
+R+ RV + D E ATV+Q+ + +R G+L ++ + I A++S+ G +
Sbjct: 662 VRKGAASRVDLLPDASETATVLQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECV 721
Query: 69 DVFYVTDINGQKIGDQATISYIKTTVE 95
DVFY+TD +G + ++ KT ++
Sbjct: 722 DVFYLTDGHGSPLDEEDARVTAKTILD 748
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L + L + + A++++ G +D FYVT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI +A + ++
Sbjct: 886 DLLGGKIESRARLQTLE 902
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 78/216 (36%), Gaps = 20/216 (9%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + T + + TD PGL ++ + +++ A I T A + G A
Sbjct: 723 PQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPFGGAF 782
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
++L +IK + + L L T R R +
Sbjct: 783 HSPEQLGRIKAAIEDSLSNRHRLITK--------------------LEARPLPRTRAEAF 822
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P+V I + + +T + + ++DRP LLF L + V+ V T A +
Sbjct: 823 QIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTF 882
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327
Y+ + G I S A Q + L A SE LE
Sbjct: 883 YVTDLLGGKIESRARLQTLERRLLEAAGGETSELLE 918
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND + T+I+VD+ +R G+L ++ + L D ++ I A I++ G ++D FYV
Sbjct: 834 PTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYV 893
Query: 74 TDINGQKIGDQATISYIK 91
D+ G K A + ++
Sbjct: 894 KDMFGLKFFSDAKMKSLE 911
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + A A+ V+D G ED +K+K+
Sbjct: 745 ADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQDHD-GHPFED----IKLKR 799
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
L + +T S +V+ + RD + + ++T +
Sbjct: 800 LEDMIHKT-----------LSGKVIARD------AMKSRDKMKKREKAFTVPTNITFDND 842
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L D + + T + +Y+K + G
Sbjct: 843 GSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFGLKFF 902
Query: 303 SEAERQRVMACLEAAIERRAS 323
S+A+ + + L AI + A
Sbjct: 903 SDAKMKSLEKKLREAIVKGAE 923
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 21/137 (15%)
Query: 48 LVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGD---QATISYIKTTVETNASFLNSM 104
LV N+V + Y + DG + VF+V D +G D + I T+ ++M
Sbjct: 760 LVGANVVDARTYTTKDG-WATAVFWVQDHDGHPFEDIKLKRLEDMIHKTLSGKVIARDAM 818
Query: 105 RS--------SVGVVP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSA 147
+S VP S YT IE+ DRPGLL +++ L D + SA
Sbjct: 819 KSRDKMKKREKAFTVPTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASA 878
Query: 148 EIWTHNARAAALLHVKD 164
I T+ + +VKD
Sbjct: 879 VIATYGEQVVDTFYVKD 895
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + + I A I+T G +V DTF+V D G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFG 898
>gi|343492904|ref|ZP_08731251.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
gi|342826699|gb|EGU61113.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
Length = 873
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 60 ISSDGGYLMDVFYVTDINGQKIGDQ---ATISYIKTTVETNASFLN-----------SMR 105
++S GY +D F V D +G+ I + + +++ ++ +S +++
Sbjct: 725 MTSKDGYALDTFMVLDQHGKPIEENRHATVVKQLQSVLDETSSATKVRRTPRQLMHFNVK 784
Query: 106 SSVGVVPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVK 163
+ V +P+K + T +E D PGLL+ V A DL+ ++ +A+I T RA L +
Sbjct: 785 TKVDFIPTKTKKRTLMEFVALDTPGLLANVGATFADLNINLHAAKITTIGERAEDLFILT 844
Query: 164 DQSSGCAIEDQKRLLKIK 181
+ G E+++ LK K
Sbjct: 845 SPNGGPLSEEEQAELKSK 862
>gi|189425747|ref|YP_001952924.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
gi|189422006|gb|ACD96404.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
Length = 900
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 11 RMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
R P R+ IDN+V + TVI + + ++ G+L + + L L I + IS+ + DV
Sbjct: 809 RHFPTRIEIDNEVSDEYTVIDIYAHDKVGLLYLITSTINQLGLYIGVSKISTKVDQVADV 868
Query: 71 FYVTDINGQKIGDQATISYIKTTV 94
FYV DI G KI + + I+T++
Sbjct: 869 FYVRDIFGHKIFAEDKLEEIRTSL 892
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 845 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 904
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 905 KDMFGLKL 912
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D S G
Sbjct: 744 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSP 802
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 803 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-KDRDKLKKREAQ 841
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 842 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 901
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 902 FYVKDMFGLKLHQKNRQETLEKKLRQAI 929
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G
Sbjct: 861 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 909
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 814 PTHITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYV 873
Query: 74 TDINGQK 80
D+ G K
Sbjct: 874 KDMFGLK 880
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 33/200 (16%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+ + ++ L + +VV A +T + ++D + G E
Sbjct: 726 DHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQD-ADGHPFEAS--------- 775
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRP-----HVT 238
R P + + LHGE + A + D + R H+T
Sbjct: 776 -----------RLPRLRSMIEKTLHGE------VIARDALKSRDKIKKRERAFRVPTHIT 818
Query: 239 ILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDG 298
+ YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 819 FDNDGSDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
Query: 299 FPISSEAERQRVMACLEAAI 318
S A++Q + L AI
Sbjct: 879 LKYHSAAKQQSLEKKLREAI 898
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D+F+V D G
Sbjct: 830 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 897 KDMFGLKL 904
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D S G
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSP 794
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 795 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-KDRDKLKKREAQ 833
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 834 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 893
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 894 FYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 897 KDMFGLKL 904
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D S G
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSP 794
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 795 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-KDRDKLKKREAQ 833
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 834 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 893
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 894 FYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 897 KDMFGLKL 904
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D S G
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSP 794
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 795 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-KDRDKLKKREAQ 833
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 834 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 893
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 894 FYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 897 KDMFGLKL 904
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D S G
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSP 794
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 795 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-KDRDKLKKREAQ 833
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 834 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 893
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 894 FYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+EL T DR GLL+ + + G+ ++ A+I+TMG + +D FF+TD G P+
Sbjct: 814 VELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITDDQGQPL 865
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 814 PTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYV 873
Query: 74 TDINGQKIGDQATISYIKTTV 94
D+ G K +A ++T +
Sbjct: 874 KDMFGLKYHSEAKQRTLETKL 894
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 27/205 (13%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ S ++ L + +VV A +T + ++D + G E
Sbjct: 725 ADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDAFWIQD-AEGHPYEAA-------- 775
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
R P +S + L GE L RD + +N H+T +
Sbjct: 776 ------------RLPRLSQMILKTLKGEVVARDAL-KSRDKIKKREKAFNVPTHITFDNE 822
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 823 GSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYH 882
Query: 303 SEAERQRVMACLEAAIERRASEGLE 327
SEA+++ LE + + +EG E
Sbjct: 883 SEAKQR----TLETKLRKAITEGAE 903
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D+F+V D G
Sbjct: 830 IEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|303248455|ref|ZP_07334714.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
gi|302490166|gb|EFL50085.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
Length = 886
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
PP VV+D+ + TV++V +R G+L ++ L +L L A + + G + DVFY
Sbjct: 793 TPPEVVLDDRASDLYTVLEVTCDDRVGLLYDIAHTLYELRLETHLAKVVTPAGRVRDVFY 852
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V +G+++ D + IK +
Sbjct: 853 VRGPDGRRVEDPEQAAEIKAAL 874
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+ DDR GLL DI L E L A++ T +V+D F+V G V DP+
Sbjct: 810 LEVTCDDRVGLLYDIAHTLYELRLETHLAKVVTPAGRVRDVFYVRGPDGRRVEDPEQAAE 869
Query: 387 IQHQI 391
I+ +
Sbjct: 870 IKAAL 874
>gi|347731600|ref|ZP_08864693.1| HD domain protein [Desulfovibrio sp. A2]
gi|347519648|gb|EGY26800.1| HD domain protein [Desulfovibrio sp. A2]
Length = 983
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 9 IRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLM 68
+RR PP V IDN++ + TV++V + +R +L +V + L L L I A I++ G
Sbjct: 894 VRR--PPEVRIDNELSDFHTVVEVFTPDRPALLYDVARVLQALQLDILFAKIATLGNRTS 951
Query: 69 DVFYVTDINGQKIGDQATISYIKTTV 94
D F V + GQKI D+ + ++ +
Sbjct: 952 DSFSVRTVYGQKITDEQQMDEVRAAL 977
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E++T DR LL D+ R+L+ L I A+I+T+G + D+F V G KI D
Sbjct: 913 VEVFTPDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVRTVYGQ----KITDEQ 968
Query: 388 Q 388
Q
Sbjct: 969 Q 969
>gi|425071434|ref|ZP_18474540.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
gi|404599241|gb|EKA99701.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
Length = 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 229 VNYNS-RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME- 286
+ +NS P V I ++ T V I DRP L L +++ + T R
Sbjct: 679 IEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNM 738
Query: 287 AYQEYYIKHVDGFPISSE---AERQRVMACLEAAIERRA--------------------- 322
A + + +G P++ + A RQ ++ + A A
Sbjct: 739 AMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFI 798
Query: 323 ----SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
++ +EL+ DR GLL+ I ++ + L + A I+T+G +V+D F +TD N
Sbjct: 799 ASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNA 858
Query: 379 VDPKIVDSIQHQIGRTIL 396
++ K+ D + ++ + ++
Sbjct: 859 LNQKMKDEVVERLTKALV 876
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+I T + + +R + V L NL I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 74 TDINGQKIG-------DQATISYIKTTVETNA---SFLNSMR-----SSVGVVPSK--EY 116
+ NG+ + QA I + NA + +R + + + S +
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T +EL DRPGLL+ + V DLS S+ A I T R + D + + K
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNALNQKMK 864
>gi|425070066|ref|ZP_18473181.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
gi|404596023|gb|EKA96553.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
Length = 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 229 VNYNS-RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME- 286
+ +NS P V I ++ T V I DRP L L +++ + T R
Sbjct: 679 IEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNM 738
Query: 287 AYQEYYIKHVDGFPISSE---AERQRVMACLEAAIERRA--------------------- 322
A + + +G P++ + A RQ ++ + A A
Sbjct: 739 AMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFI 798
Query: 323 ----SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
++ +EL+ DR GLL+ I ++ + L + A I+T+G +V+D F +TD N
Sbjct: 799 ASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNA 858
Query: 379 VDPKIVDSIQHQIGRTIL 396
++ K+ D + ++ + ++
Sbjct: 859 LNQKMKDEVVERLTKALV 876
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+I T + + +R + V L NL I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 74 TDINGQKIG-------DQATISYIKTTVETNA---SFLNSMR-----SSVGVVPSK--EY 116
+ NG+ + QA I + NA + +R + + + S +
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T +EL DRPGLL+ + V DLS S+ A I T R + D + + K
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNALNQKMK 864
>gi|227357253|ref|ZP_03841610.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
gi|227162516|gb|EEI47505.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
Length = 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 229 VNYNS-RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME- 286
+ +NS P V I ++ T V I DRP L L +++ + T R
Sbjct: 679 IEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNM 738
Query: 287 AYQEYYIKHVDGFPISSE---AERQRVMACLEAAIERRA--------------------- 322
A + + +G P++ + A RQ ++ + A A
Sbjct: 739 AMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFI 798
Query: 323 ----SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
++ +EL+ DR GLL+ I ++ + L + A I+T+G +V+D F +TD N
Sbjct: 799 ASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNA 858
Query: 379 VDPKIVDSIQHQIGRTIL 396
++ K+ D + ++ + ++
Sbjct: 859 LNQKMKDEVVERLTKALV 876
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+I T + + +R + V L NL I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 74 TDINGQKIG-------DQATISYIKTTVETNA---SFLNSMR-----SSVGVVPSK--EY 116
+ NG+ + QA I + NA + +R + + + S +
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T +EL DRPGLL+ + V DLS S+ A I T R + D + + K
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNALNQKMK 864
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
RV IDN+V TVI + + ++ GIL ++ L +L L I + IS+ + DVFYV D
Sbjct: 816 RVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKD 875
Query: 76 INGQKIGDQATISYIK 91
I G KI + + I+
Sbjct: 876 IFGHKITNPERLEEIR 891
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-NARAAALLHVKDQSSGCAIEDQ 174
Y++ + D PGL S ++ V+ +++ A+I T N +A +L V + G I D
Sbjct: 714 YSNFTICTLDVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQV-NSPQGFIITDV 772
Query: 175 KRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSR 234
R ++ + L VL +TP S+ + +R L A++ R
Sbjct: 773 GRWKRVNEDLRQVLTG----KTPVASLVA-------KRQRPTLLAEKAKPRFSA------ 815
Query: 235 PHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIK 294
V I + DYT + I + D+ +L+ LT++ + + T + +Y+K
Sbjct: 816 -RVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVK 874
Query: 295 HVDGFPISS----EAERQRVMACLE 315
+ G I++ E R+R++ +E
Sbjct: 875 DIFGHKITNPERLEEIRERLLKAVE 899
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++YT D+ G+L IT L E GL I ++IST +V D F+V D G+ + +P+ ++
Sbjct: 830 IDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHKITNPERLEE 889
Query: 387 IQHQIGRTI 395
I+ ++ + +
Sbjct: 890 IRERLLKAV 898
>gi|393770938|ref|ZP_10359414.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
gi|392723594|gb|EIZ80983.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
Length = 924
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
PRV+ DN TV++V++ +R +L + L + L++ A+I++ G D FYVT
Sbjct: 831 PRVLFDNKGSNRFTVVEVNARDRPALLNRLAHALFESRLMVHSAHIATYGERAADTFYVT 890
Query: 75 DINGQKIGDQATISYIKTTVETNAS 99
D+ G+K+ A + ++ + AS
Sbjct: 891 DLFGEKVIGTARLKALERRLLDAAS 915
>gi|357635440|ref|ZP_09133318.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
gi|357583994|gb|EHJ49327.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
Length = 905
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
PP V++DN + TVI+V +R G+L ++ + L +L L A + + G + DVFY
Sbjct: 812 TPPVVLLDNRASDLFTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFY 871
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V +G+++ D IK +
Sbjct: 872 VRGADGRRVEDPEQAEEIKAAL 893
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DDR GLL DI R L E L A++ T +V+D F+V A G V DP+ +
Sbjct: 829 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 888
Query: 387 IQHQI 391
I+ +
Sbjct: 889 IKAAL 893
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+++VD+ +R G+L ++ + L ++ I+ A I++ G ++D FYV
Sbjct: 836 PTSIAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYV 895
Query: 74 TDINGQKI 81
D+ G KI
Sbjct: 896 KDMFGLKI 903
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 102/250 (40%), Gaps = 34/250 (13%)
Query: 79 QKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLT 138
Q +G Q+ +++ + + + +R V ++ T I +D PG+ S ++ L
Sbjct: 705 QGLGLQSHLAFARMLKDIRN---DEIRIDVTADIDRDATRICFALSDHPGIFSRLAGALA 761
Query: 139 DLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTP 197
+ +VV A +T + A A+ V+D D +L +++ + +LR R
Sbjct: 762 LVGANVVDARTYTSKDGYATAVFWVQDGDGHP--YDPHKLPRLRGTIGKILRGEVIAR-- 817
Query: 198 SMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDR 257
G ++ +RDF + +++ YT V + ++DR
Sbjct: 818 ----------EGLDTRDKIKKRERDFRVPTSIAFDNE--------GSEIYTIVEVDTRDR 859
Query: 258 PKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAA 317
P LL+D L + + T + +Y+K + G I S+A+ +AA
Sbjct: 860 PGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFGLKIYSDAK--------QAA 911
Query: 318 IERRASEGLE 327
+ER+ E ++
Sbjct: 912 LERKLREAID 921
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 5 FAKLIR--RMNPPRVVIDNDVCEHATVIQVDSVNRHGIL--LEVIQFLVDLNLVITKAYI 60
FA++++ R + R+ + D+ AT I + GI L LV N+V + Y
Sbjct: 715 FARMLKDIRNDEIRIDVTADIDRDATRICFALSDHPGIFSRLAGALALVGANVVDARTYT 774
Query: 61 SSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV------ETNASFLNSMRSSVGV---- 110
S DG Y VF+V D +G D + ++ T+ E A R +
Sbjct: 775 SKDG-YATAVFWVQDGDGHPY-DPHKLPRLRGTIGKILRGEVIAREGLDTRDKIKKRERD 832
Query: 111 --VP---------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAAL 159
VP S+ YT +E+ DRPGLL +++ L S+ SA I T+ A+
Sbjct: 833 FRVPTSIAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDT 892
Query: 160 LHVKDQSSGCAIEDQKRLLKIKKL 183
+VKD D K+ +KL
Sbjct: 893 FYVKDMFGLKIYSDAKQAALERKL 916
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 323 SEGLEL----ELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+EG E+ E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 843 NEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFG 900
>gi|84394416|ref|ZP_00993133.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
gi|84374949|gb|EAP91879.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
Length = 873
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L N + A + S
Sbjct: 670 LLRLEDPSQPLVLISQKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIK-----------TTVETNASFLN----SMRSSVG 109
G+++D F V D +G+ I + + K T ++T + N +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
+P SK+ T +EL D PGLL++V A +L ++ A+I T RA L + +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 GCAIEDQKRLLK 179
G E+Q++ L+
Sbjct: 850 GRLSEEQEQALR 861
>gi|284008522|emb|CBA75047.1| PII uridylyl-transferase [Arsenophonus nasoniae]
Length = 887
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 20/201 (9%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGG 65
A L +N P ++I T I + ++ + V L NL I A I ++
Sbjct: 677 ALLKHNLNEPLILISTISVHGGTEIFIWCPDQPSLFAAVAGELDRRNLNIHSAQIFTNKD 736
Query: 66 YL-MDVFYVTDINGQKIGD-------QATISYIKTTVETNASFLN-SMRSSVGVVPSKEY 116
+ MD F V D GQ + + QA + IKT N R VP+K Y
Sbjct: 737 NMTMDTFVVLDPKGQPLANDRYENIRQALLKVIKTPDSNTLKTRNVHHRFRHFNVPTKVY 796
Query: 117 ---------TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
T +EL D+PGLL+++ + T++S + A I T R L + DQ++
Sbjct: 797 FLPNQNARRTYMELIALDQPGLLAQIGNIFTEMSVLLHGARITTIGERVEDLFVLTDQNN 856
Query: 168 GCAIEDQKRLLKIKKLLCNVL 188
DQ R K+ + L L
Sbjct: 857 QAL--DQNRQQKLAEKLAQTL 875
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+EL D+ GLL+ I I E + + A I+T+G +V+D F +TD + +D +
Sbjct: 808 MELIALDQPGLLAQIGNIFTEMSVLLHGARITTIGERVEDLFVLTDQNNQALDQNRQQKL 867
Query: 388 QHQIGRTI 395
++ +T+
Sbjct: 868 AEKLAQTL 875
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+IDN TVI+V++ +R +L + L + + A++++ G +D FY+T
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI +A + ++
Sbjct: 886 DLIGGKIESKARLQTLE 902
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 79/216 (36%), Gaps = 20/216 (9%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + T + + D PGL V+ + +++ A I T A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRVAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 EDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNY 231
++L +I+ + + L L T A R R +
Sbjct: 783 HSPEQLKRIRSAIEDSLSNRHRLITK--------------------LAARPLPRTRAEAF 822
Query: 232 NSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEY 291
P+V I + + +T + + ++DRP LLF L + V+ V T A +
Sbjct: 823 RIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTF 882
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327
YI + G I S+A Q + L AA E L+
Sbjct: 883 YITDLIGGKIESKARLQTLERRLLAAAGGEVGEALQ 918
>gi|386393406|ref|ZP_10078187.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
gi|385734284|gb|EIG54482.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
Length = 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
PP V++DN + TVI+V +R G+L ++ + L +L L A + + G + DVFY
Sbjct: 788 TPPVVLLDNRASDLFTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFY 847
Query: 73 VTDINGQKIGDQATISYIKTTV 94
V +G+++ D IK +
Sbjct: 848 VRGADGRRVEDPEQAEEIKAAL 869
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ DDR GLL DI R L E L A++ T +V+D F+V A G V DP+ +
Sbjct: 805 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 864
Query: 387 IQHQI 391
I+ +
Sbjct: 865 IKAAL 869
>gi|449134434|ref|ZP_21769935.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
gi|448887064|gb|EMB17452.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
Length = 883
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V+ DND +H T++ + + +R +L ++ L L++VI A I + + DVFYV
Sbjct: 794 PTKVLFDNDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYV 853
Query: 74 TDINGQKIGD 83
T+++G I D
Sbjct: 854 TNLDGSPITD 863
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
L ++T DR LLSDI+ L + + I+ A+I T ++ D F+VT+ G+P+
Sbjct: 810 LSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNLDGSPI 861
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 897 KDMFGLKL 904
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 23/208 (11%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCA 170
P ++ T D PG+ S ++ L + +VV A +T + A A+ ++D + G
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-AEGSP 794
Query: 171 IEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVN 230
E R P ++ + L GE + L DRD +
Sbjct: 795 YEIS--------------------RLPRLTSMIDKTLKGEVVAREAL-RDRDKVKKRESQ 833
Query: 231 YNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQE 290
+ H+ + YT + + ++DRP LL+D L + + T +
Sbjct: 834 FRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDS 893
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAI 318
+Y+K + G + + ++ + L AI
Sbjct: 894 FYVKDMFGLKLHQKTRQETLEKKLRQAI 921
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI-VDS 386
+E+ T DR GLL D+TR L + I A I+T G +V D+F+V D G + K ++
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKLHQKTRQET 912
Query: 387 IQHQIGRTILQ 397
++ ++ + IL+
Sbjct: 913 LEKKLRQAILE 923
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 11 RMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDV 70
R P +V++DN T+++V +V+R G+L + + L +L + I+ A I++ + DV
Sbjct: 769 RTAPSQVLVDNQSSAMYTILEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADV 828
Query: 71 FYVTDINGQKIGDQATISYIKTTV 94
FYV G+K+ D I +K +
Sbjct: 829 FYVRTHQGEKVSDPEQIDELKRAL 852
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
LE+YT DR GLL I R L E + I A+I+T +V D F+V G V DP+ +D
Sbjct: 788 LEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADVFYVRTHQGEKVSDPEQIDE 847
Query: 387 IQHQIGRTILQVKGNLNTPPKLP 409
++ R +L L+ P ++P
Sbjct: 848 LK----RALLFW---LDGPAEMP 863
>gi|307107307|gb|EFN55550.1| hypothetical protein CHLNCDRAFT_31136 [Chlorella variabilis]
Length = 641
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS-DG-GYLMDVFYVT 74
V DND TV+Q+ N +L +V L + + ++ A I++ +G G + D+F VT
Sbjct: 25 VEFDNDSDPQCTVMQLFGRNDTEVLAQVTNVLTAVGVAVSSANINTGEGEGPVRDIFRVT 84
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSS----VGVVPSKEYTSI--ELTGTDRPG 128
D G+K+ +A + + + A+ SMRSS G+V + TS LT P
Sbjct: 85 DGEGKKLAPEAWPALKQQLL---AALAGSMRSSKPSIFGMVAEADQTSTLGALTNAGDPD 141
Query: 129 LLSEVSAVLTDLSCSVVSAE 148
L + +T + ++VS E
Sbjct: 142 ALERAAGEMTSAAAALVSVE 161
>gi|119505664|ref|ZP_01627734.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
gi|119458476|gb|EAW39581.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
Length = 875
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 21/151 (13%)
Query: 45 IQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKI-GDQATISYIKT----------- 92
++FL DL++ + Y+ DG L D FYV +G + GD T+ I+
Sbjct: 709 LEFL-DLSVNDARIYLGGDGATL-DTFYVLQADGNPVSGDLTTLGNIRDGLSAALTRQEI 766
Query: 93 ------TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVS 146
T SF+ +SV + +T +E+ DRPGLL+ + AV + ++ +
Sbjct: 767 RTVTRHTPRRQKSFVIPTETSVHQDERRGWTVLEVATPDRPGLLANIGAVFVAQNVALQA 826
Query: 147 AEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177
A+I T R + V S G +I D +L
Sbjct: 827 AKIQTLGERVEDVFFVT-TSDGNSINDAHKL 856
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
LE+ T DR GLL++I + + ++ A+I T+G +V+D FFVT + GN ++
Sbjct: 799 LEVATPDRPGLLANIGAVFVAQNVALQAAKIQTLGERVEDVFFVTTSDGNSIN 851
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DND + T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 800 PTHITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYV 859
Query: 74 TDINGQK 80
D+ G K
Sbjct: 860 KDMFGLK 866
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V D+F+V D G
Sbjct: 816 IEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFG 864
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
+VVIDN T+++V + L + Q L D L I +A I+++ L+DVFYV
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 76 INGQKIGDQATISYIKTTV 94
G K+ D + ++ T+
Sbjct: 828 QAGDKLTDVEAMDKVRLTL 846
>gi|262044764|ref|ZP_06017810.1| uridylyltransferase, partial [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037876|gb|EEW39101.1| uridylyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 230
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D ++P + + + R T + I S DRP LF VC D + +
Sbjct: 19 QLAWHARNLLRHDL----NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 73
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISS---EAERQRVMACL-----EAAIERRASE 324
H + T R A + + DG P+S+ EA RQ + + + RR +
Sbjct: 74 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAA 133
Query: 325 GLE--------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
L LEL D+ GLL+ + ++ + G+ + A I+T+G +
Sbjct: 134 KLRHFSVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 193
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQI 391
V+D F + A ++ ++ +Q ++
Sbjct: 194 VEDLFIIATADRRALNNELQQEVQQRL 220
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEYY 292
+P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 688 KPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFI 747
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE---------------- 327
+ DG P+S + ++ LE AI RR S L
Sbjct: 748 VLEPDGSPLSPD-RHPMIIQALEQAITQSQWVPPRTRRPSAKLRHFSVDTEVNFLPTHTD 806
Query: 328 ----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D ++
Sbjct: 807 RRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEM 866
Query: 384 VDSIQHQI 391
++Q ++
Sbjct: 867 RKALQQRL 874
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+ + P V++ T I + S +R + V L NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 LMDVFYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVV 111
MD F V + +G + +QA ++ ++ L S+ + V +
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSQWVPPRTRRPSAKLRHFSVDTEVNFL 801
Query: 112 PSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
P+ + +EL D+PGLL+ V V DL S+ A I T R L + +
Sbjct: 802 PTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQA 861
Query: 170 AIEDQKRLLK 179
E+ ++ L+
Sbjct: 862 LDEEMRKALQ 871
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEYY 292
+P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 688 KPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFI 747
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE---------------- 327
+ DG P+S + ++ LE AI RR S L
Sbjct: 748 VLEPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTD 806
Query: 328 ----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D ++
Sbjct: 807 RRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEM 866
Query: 384 VDSIQHQI 391
++Q ++
Sbjct: 867 RKALQQRL 874
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+ + P V++ T I + S +R + V L NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 LMDVFYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVV 111
MD F V + +G + +QA ++ ++ L S+ + V +
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFL 801
Query: 112 PSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
P+ + +EL D+PGLL+ V V DL S+ A I T R L + +
Sbjct: 802 PTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQA 861
Query: 170 AIEDQKRLLK 179
E+ ++ L+
Sbjct: 862 LDEEMRKALQ 871
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R G+L ++ + L N+ I A I++ G ++D FYV
Sbjct: 847 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYV 906
Query: 74 TDINGQK 80
D+ G K
Sbjct: 907 KDMFGLK 913
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 863 IEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDMFG 911
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 23/196 (11%)
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKK 182
D PG+ + ++ L + +VV A +T + ++D S G A E RL +++
Sbjct: 758 ADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQD-SEGNAYE-ASRLPRLRD 815
Query: 183 LLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDC 242
+ LR G++ S +V ER + H+T +
Sbjct: 816 TIEKTLR--GEIVARDALKSRDKVKKRER------------------AFKVPTHITFDNE 855
Query: 243 SDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPIS 302
YT + + ++DRP LL+D L + + + T + +Y+K + G
Sbjct: 856 GSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDMFGLKYY 915
Query: 303 SEAERQRVMACLEAAI 318
+EA+++ + L AI
Sbjct: 916 TEAKQRTLEKRLREAI 931
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEYY 292
+P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 688 KPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFI 747
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE---------------- 327
+ DG P+S + ++ LE AI RR S L
Sbjct: 748 VLEPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTD 806
Query: 328 ----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D ++
Sbjct: 807 RRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEM 866
Query: 384 VDSIQHQI 391
++Q ++
Sbjct: 867 RKALQQRL 874
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 18/190 (9%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGY 66
L+ + P V++ T I + S +R + V L NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 LMDVFYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVV 111
MD F V + +G + +QA ++ ++ L S+ + V +
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFL 801
Query: 112 PSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGC 169
P+ + +EL D+PGLL+ V V DL S+ A I T R L + +
Sbjct: 802 PTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQA 861
Query: 170 AIEDQKRLLK 179
E+ ++ L+
Sbjct: 862 LDEEMRKALQ 871
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 54 VITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKT----------TVETNASFLN- 102
++ +++ G++MD F + NG+ + + I +K V N L+
Sbjct: 721 ILDAQILATRDGFVMDTFVLLQRNGKPLTETRRIEEVKQHLLDVLHRRRKVPKNNRPLSR 780
Query: 103 -----SMRSSVGVVPSKEY--TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR 155
S+++ V +P K T+ EL DRPGL++ ++A+L L S+++A+I T +
Sbjct: 781 RLKNFSVKTQVNFLPVKHRGRTTFELVALDRPGLVARIAAILQRLDVSLLAAKITTIGEQ 840
Query: 156 AAALLHVKDQSSGCAIEDQKRLLK 179
A L V ++QK LK
Sbjct: 841 AEDLFIVSSHRGEALSDEQKLALK 864
>gi|221133317|ref|ZP_03559622.1| UTP-GlnB uridylyltransferase, GlnD [Glaciecola sp. HTCC2999]
Length = 876
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+EL D GLL+ I + ++ L +R A+IST+G + +D F V+D + + P++ ++
Sbjct: 800 IELEALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDVFIVSDEHNHALSPELQLAL 859
Query: 388 QHQIGRTILQVK 399
+ QI T+ Q++
Sbjct: 860 KKQISLTLDQLE 871
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 21 NDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDGGYLMDVFYVTDINGQ 79
N + T + + +R + ++ L + NL I A I+ + GY+ D V D + +
Sbjct: 684 NHTTKAGTELLIYGKDRPAVFAQIASVLDNANLSILDANIAITPDGYVFDSIIVVDEDNE 743
Query: 80 KIG--------DQATISYI-KTTVETNASFLNSMRSSVGVVPSK--------EYTSIELT 122
KI +QA ++ + K T E + S S R VP+K + T IEL
Sbjct: 744 KIASTERCYKIEQAILAQLNKATREHHNSRKLSRRLKQLNVPTKVRFFSASDDATLIELE 803
Query: 123 GTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS 167
D PGLL+ + V D + ++ A+I T RA + V D+ +
Sbjct: 804 ALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDVFIVSDEHN 848
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 47/88 (53%)
Query: 4 EFAKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD 63
+ ++ ++++N P V + AT+I++++++ G+L + VD NL + A IS+
Sbjct: 774 KLSRRLKQLNVPTKVRFFSASDDATLIELEALDTPGLLASIGHVFVDFNLTLRLAKISTI 833
Query: 64 GGYLMDVFYVTDINGQKIGDQATISYIK 91
G DVF V+D + + + ++ K
Sbjct: 834 GERAEDVFIVSDEHNHALSPELQLALKK 861
>gi|90415791|ref|ZP_01223724.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
gi|90332165|gb|EAS47362.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
Length = 904
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LE+ T DR GLL+ +T+I + L + A+IST+G +V+D F++TD + P+
Sbjct: 816 LEIITPDRPGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLTDKNFEPL 867
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 21 NDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQK 80
+DV + ++++ + +R G+L + Q V L + A IS+ G + D+FY+TD N +
Sbjct: 807 HDVDANCVILEIITPDRPGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLTDKNFEP 866
Query: 81 IGDQATISYIKTTVET 96
+ D + + T+ +
Sbjct: 867 LTDSDVSAALTATIRS 882
>gi|389792807|ref|ZP_10195989.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
gi|388435671|gb|EIL92568.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
Length = 877
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 32/186 (17%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYV 73
P V + +T + V + +R G+ V L L + +A I SS G MD F +
Sbjct: 684 PLVAVHPMSVRGSTELFVCTPDRDGLFASVTAMLDRLRFSVMEARILSSPKGMAMDTFLL 743
Query: 74 TDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGVVPSK------------------- 114
+ + Q+ + ++ ++ ++ S GV PSK
Sbjct: 744 LEADSQQPANTVRAEELQQRLQ------RALTLSTGVQPSKRSMSRHQRHFQTAPKISFD 797
Query: 115 ---EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSS---G 168
+ T + L GTDRPGLL+ V+ V+ D V A I T R + D+ + G
Sbjct: 798 DAGDRTQLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLG 857
Query: 169 CAIEDQ 174
A+ D+
Sbjct: 858 PALRDR 863
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 322 ASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
A + +L L DR GLL+ + +++ + G + A I+T G +V+D F ++D P+ P
Sbjct: 799 AGDRTQLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLGP 858
Query: 382 KIVDSIQHQI 391
+ D + H +
Sbjct: 859 ALRDRLLHAL 868
>gi|336317530|ref|ZP_08572382.1| (protein-PII) uridylyltransferase [Rheinheimera sp. A13L]
gi|335878152|gb|EGM76099.1| (protein-PII) uridylyltransferase [Rheinheimera sp. A13L]
Length = 874
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 8 LIRRMNP--PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
++R +P P V++D +T + + + ++ + ++ L + I A I ++
Sbjct: 669 ILRHKDPDEPLVLVDKTPFRGSTQVFIYTPDQDNLFAHLVAALDSKKVNIFDAQIMTNKD 728
Query: 65 GYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS-----------FLNSMRS-----SV 108
GY MD F V + NG+ + + + +K +ET S MR V
Sbjct: 729 GYAMDTFVVLEQNGEPVTSPSRLQSLKRALETYISGKPELSRGKPRLSRQMRPFNIAPKV 788
Query: 109 GVVP--SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQS 166
+P +K T +E+T D PGLL+++ +V S+ +A+I T +A + +
Sbjct: 789 VFIPGANKHRTMVEITALDMPGLLADIGSVFQQCEISIHAAKITTIGEKAEDFFMISTRQ 848
Query: 167 SGCAIEDQKRLLK 179
DQ+ L+
Sbjct: 849 DQALDADQQSQLR 861
>gi|197286133|ref|YP_002152005.1| PII uridylyl-transferase [Proteus mirabilis HI4320]
gi|194683620|emb|CAR44522.1| [protein-PII] uridylyltransferase [Proteus mirabilis HI4320]
Length = 881
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 229 VNYNS-RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME- 286
+ +NS P V I ++ T + I DRP L L +++ + T R
Sbjct: 679 IEHNSAEPMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNM 738
Query: 287 AYQEYYIKHVDGFPISSE---AERQRVMACLEAAIERRA--------------------- 322
A + + +G P++ + A RQ ++ + A A
Sbjct: 739 AMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFI 798
Query: 323 ----SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNP 378
++ +EL+ DR GLL+ I ++ + L + A I+T+G +V+D F +TD N
Sbjct: 799 ASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNA 858
Query: 379 VDPKIVDSIQHQIGRTIL 396
++ K+ D + ++ + ++
Sbjct: 859 LNQKMKDEVVERLTKALV 876
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL-MDVFYV 73
P V+I T I + +R + V L NL I A I ++ + MD F V
Sbjct: 686 PMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFTNRDNMAMDTFIV 745
Query: 74 TDINGQKIG-------DQATISYIKTTVETNA---SFLNSMR-----SSVGVVPSK--EY 116
+ NG+ + QA I + NA + +R + + + S +
Sbjct: 746 LEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTKINFIASNHNKR 805
Query: 117 TSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T +EL DRPGLL+ + V DLS S+ A I T R + D + + K
Sbjct: 806 TYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDNENNALNQKMK 864
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L +L L I + +S+ + DVFYV
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 TDINGQKI--GDQ 84
DI G K+ GD+
Sbjct: 870 KDIFGHKLLGGDK 882
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+++YT D+ GLL IT L E GL I +++ST +V D F+V D G+ +
Sbjct: 826 IDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFGHKL 877
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
K Y++ + D PGL S ++ V+ +++ A+I T N +A +L V + G I
Sbjct: 708 KGYSNFTICTLDVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQV-NSPQGFVIT 766
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
D+ R +++ + VL+ G +R ++ ++R + ++ +
Sbjct: 767 DESRWQRLEDDMRQVLQ--GKVRVGTLV---------KKRYRPTILTEKPKPKFPT---- 811
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
V I + DYT + I + D+ LL+ LT++ + V T + +Y
Sbjct: 812 ---RVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFY 868
Query: 293 IKHVDGFPISSEAERQRVMACLEAAIE 319
+K + G + + + + L AI+
Sbjct: 869 VKDIFGHKLLGGDKLEEIRIHLLKAID 895
>gi|423127483|ref|ZP_17115162.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5250]
gi|376394522|gb|EHT07172.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5250]
Length = 887
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D S+P + + + R T + I S DRP LF VC D + +
Sbjct: 676 QLAWHARNLLRHDL----SKPMILLSSHATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 730
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----- 327
H + T R A + + DG P+S++ + + LE I +R+ +
Sbjct: 731 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSAD-RHEMIRVGLEQTISQRSWQPPAPRRQA 789
Query: 328 ------------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR 363
LEL D+ GLL+ + ++ + G+ + A I+T+G
Sbjct: 790 AKLRHFSVPTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGE 849
Query: 364 KVKDTFFVTDASGNPVDPKIVDSIQHQI 391
+V+D F + A ++ ++ +Q ++
Sbjct: 850 RVEDLFIIATADRRALNNELQQEVQQRL 877
>gi|389706449|ref|ZP_10186462.1| uridylyltransferase [Acinetobacter sp. HA]
gi|388610584|gb|EIM39701.1| uridylyltransferase [Acinetobacter sp. HA]
Length = 890
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 234 RPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYI 293
RPH +D + I ++D+P L TV L M V ++T + Y+
Sbjct: 689 RPHRKYA----QDAVQIFIYTQDKPNLFATTVAVLDRMDLDVQDARIITATKAFSLDTYV 744
Query: 294 KHVDGF-PISSEAERQ-RVMACLEAAI----------ERRASEGLE-------------- 327
+D F + ++ ER+ +V+ L+ A+ +RR L
Sbjct: 745 V-LDRFGTLLTDPERELKVIDALKDALSHSDKYPGLMQRRIPRQLRHFDIENTVDISLNP 803
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
+E+ T D+ GLL+ + + GL I A+I+T+G + +D FFVT G P++P
Sbjct: 804 VLNQNMVEIATLDQPGLLAKVGGLFMMRGLDIHSAKIATLGERAEDIFFVTKKDGMPLNP 863
Query: 382 K 382
+
Sbjct: 864 E 864
>gi|402845075|ref|ZP_10893422.1| protein-P-II uridylyltransferase [Klebsiella sp. OBRC7]
gi|423106524|ref|ZP_17094225.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5242]
gi|376377961|gb|EHS90728.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5242]
gi|402272675|gb|EJU21893.1| protein-P-II uridylyltransferase [Klebsiella sp. OBRC7]
Length = 887
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D S+P + + + R T + I S DRP LF VC D + +
Sbjct: 676 QLAWHARNLLRHDL----SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 730
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----- 327
H + T R A + + DG P+S++ + + LE I +R+ +
Sbjct: 731 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSAD-RHEMIRLGLEQTISQRSWQPPAPRRQA 789
Query: 328 ------------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR 363
LEL D+ GLL+ + ++ + G+ + A I+T+G
Sbjct: 790 AKLRHFSVPTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGE 849
Query: 364 KVKDTFFVTDASGNPVDPKIVDSIQHQI 391
+V+D F + A ++ ++ +Q ++
Sbjct: 850 RVEDLFIIATADRRALNNELQQEVQQRL 877
>gi|145637873|ref|ZP_01793519.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
gi|145268943|gb|EDK08900.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
Length = 123
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 93 TVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH 152
TV+T+ FL+ + KE+T +EL D+ GLL++VS + TDL+ ++++A+I T
Sbjct: 37 TVQTDVRFLHENK--------KEHTEMELVALDKAGLLAQVSQIFTDLNLNLLNAKITTV 88
Query: 153 NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTN 191
+A + +Q G A++ Q+R ++L NVL N
Sbjct: 89 GEKAEDFFILTNQ-FGQALDSQQR-----EILRNVLYRN 121
Score = 43.9 bits (102), Expect = 0.17, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKI 383
E E+EL D+ GLL+ +++I + L + A+I+T+G K +D F +T+ G +
Sbjct: 51 EHTEMELVALDKAGLLAQVSQIFTDLNLNLLNAKITTVGEKAEDFFILTNQFG-----QA 105
Query: 384 VDSIQHQIGRTIL 396
+DS Q +I R +L
Sbjct: 106 LDSQQREILRNVL 118
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ E T+I+VD+ +R +L ++ + L N+ I A I++ G ++D FYV
Sbjct: 803 PTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYV 862
Query: 74 TDINGQKI 81
D+ G K+
Sbjct: 863 KDMFGLKL 870
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 23/199 (11%)
Query: 125 DRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
D PG+ S ++ L +VV A +T + A A+ ++D + G ED
Sbjct: 715 DHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQD-ADGAPYED---------- 763
Query: 184 LCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCS 243
+R P + + + L GE + + + +++ + + H+T +
Sbjct: 764 ----------VRIPRLRETIRKTLTGEVVAREAVKSRDKYKKRERA-FKVPTHITFDNEG 812
Query: 244 DRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISS 303
+T + + ++DRP LL+D L + + T + +Y+K + G + S
Sbjct: 813 SEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYVKDMFGLKLHS 872
Query: 304 EAERQRVMACLEAAIERRA 322
+ +R + L A++ A
Sbjct: 873 KTKRDLIEKKLRLAMQEGA 891
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR LL D+ R+L + I A I+T G +V DTF+V D G
Sbjct: 819 IEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYVKDMFG 867
>gi|302036716|ref|YP_003797038.1| putative (Protein-PII) uridylyltransferase [Candidatus Nitrospira
defluvii]
gi|300604780|emb|CBK41112.1| putative (Protein-PII) uridylyltransferase [Candidatus Nitrospira
defluvii]
Length = 894
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
P V IDN+ + T++ V + +R G+L + + L L + + IS+ + DVFY
Sbjct: 800 QPSEVRIDNETSDRFTILDVFADDRQGLLYIITNAIFQLGLSVHASRISTRLDQVADVFY 859
Query: 73 VTDINGQKIGDQATISYIKTTVETNASFLNSMRSSVGV 110
VT ++G+K+ + + I+ AS LN + +G
Sbjct: 860 VTGMDGKKVEEAGRLESIR------ASILNEIELFLGA 891
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
L+++ DDR GLL IT + + GL + + IST +V D F+VT G V+
Sbjct: 817 LDVFADDRQGLLYIITNAIFQLGLSVHASRISTRLDQVADVFYVTGMDGKKVE 869
>gi|345849786|ref|ZP_08802793.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
gi|345638767|gb|EGX60267.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
Length = 815
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + ATVI+V + + G+L + + L D + + A+ + G +D FYV
Sbjct: 730 PPRVSVHPAASRQATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYV 789
Query: 74 TDINGQKIGDQATISYIKTTVET 96
T G + + +S + ET
Sbjct: 790 TGPEGAPLPGEEAVSVARKLEET 812
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + G+ +R A T+G D F+VT G P+ + S+
Sbjct: 746 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYVTGPEGAPLPGEEAVSV 805
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 806 ARKLEETL 813
>gi|344940504|ref|ZP_08779792.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
gi|344261696|gb|EGW21967.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
Length = 881
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+EL T D GLLS I R + + + A+I+T+G + +D F++TD P+ DP +
Sbjct: 809 IELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQPITDP----A 864
Query: 387 IQHQIGRTILQVKG 400
Q QI IL++ G
Sbjct: 865 TQEQIREEILKMLG 878
>gi|83647919|ref|YP_436354.1| PII uridylyl-transferase [Hahella chejuensis KCTC 2396]
gi|83635962|gb|ABC31929.1| protein-P-II uridylyltransferase [Hahella chejuensis KCTC 2396]
Length = 906
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR GLL+ I IL E+ + + A I+T+G +V+D F +TD G P+ DP++ +
Sbjct: 830 MEIITPDRPGLLARIGSILLEHEVELVTARIATLGERVEDVFVLTDVDGAPLSDPELCRT 889
Query: 387 IQHQI 391
++ I
Sbjct: 890 LRDDI 894
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P V ND TV+++ + +R G+L + L++ + + A I++ G + DVF +
Sbjct: 814 PTEVTFSNDTVNQRTVMEIITPDRPGLLARIGSILLEHEVELVTARIATLGERVEDVFVL 873
Query: 74 TDINGQKIGD 83
TD++G + D
Sbjct: 874 TDVDGAPLSD 883
>gi|308270950|emb|CBX27560.1| hypothetical protein N47_H23820 [uncultured Desulfobacterium sp.]
Length = 407
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 8 LIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYL 67
L RM+ ++ IDN+ T+I+V S + G+L ++ L L I A I++ +
Sbjct: 315 LTSRMH--KINIDNNSSSFFTIIEVFSYDFPGLLYKITNALFSCRLDIKLAKIATKVDQV 372
Query: 68 MDVFYVTDINGQKIGDQATISYIKTTV 94
+DVFYV D +GQK+ + +S I+T +
Sbjct: 373 VDVFYVMDFDGQKVDSKERVSLIETAI 399
>gi|262202017|ref|YP_003273225.1| protein-P-II uridylyltransferase [Gordonia bronchialis DSM 43247]
gi|262085364|gb|ACY21332.1| protein-P-II uridylyltransferase [Gordonia bronchialis DSM 43247]
Length = 860
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTF 369
LEL TDDR GLLS ++ +L +G IR A ++T+G V DTF
Sbjct: 766 LELRTDDRIGLLSRVSAVLERHGADIRWARVATLGSTVVDTF 807
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + ATVI+V + + G+L + + L D ++ + A++S+ G +D FYV
Sbjct: 730 PPRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYV 789
Query: 74 TDINGQKIGDQATISYIKTTVET 96
T G + + S + ET
Sbjct: 790 TGPEGAPLPSEEAASVARKLEET 812
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L + + +R A +ST+G D F+VT G P+ + S+
Sbjct: 746 IEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYVTGPEGAPLPSEEAASV 805
Query: 388 QHQIGRTI 395
++ T+
Sbjct: 806 ARKLEETL 813
>gi|294631639|ref|ZP_06710199.1| uridylyltransferase [Streptomyces sp. e14]
gi|292834972|gb|EFF93321.1| uridylyltransferase [Streptomyces sp. e14]
Length = 817
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 23 VCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIG 82
HATVI+V + + G+L + Q + D + + A++S+ G +D FYVT ++G +
Sbjct: 741 ASRHATVIEVRAQDAPGLLFRLGQAMEDAKVRVRSAHVSTLGANAVDAFYVTALDGAPLP 800
Query: 83 DQATISYIKTTVET 96
D S + ET
Sbjct: 801 DDEAASLARRVEET 814
>gi|359767998|ref|ZP_09271778.1| PII uridylyltransferase [Gordonia polyisoprenivorans NBRC 16320]
gi|378717500|ref|YP_005282389.1| [protein-PII] uridylyltransferase GlnD [Gordonia polyisoprenivorans
VH2]
gi|359314575|dbj|GAB24611.1| PII uridylyltransferase [Gordonia polyisoprenivorans NBRC 16320]
gi|375752203|gb|AFA73023.1| [protein-PII] uridylyltransferase GlnD [Gordonia polyisoprenivorans
VH2]
Length = 864
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 325 GLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTF 369
G+ +EL TDDR GLLS ++ ++ G+ +R A+++T+G V DTF
Sbjct: 768 GVLMELRTDDRLGLLSRVSDVIEHAGVVVRWAKVATLGNTVVDTF 812
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P ++ IDN+ E T+++V + +R GIL ++ +N+ I A IS+ G + DVF++
Sbjct: 753 PTQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHI 812
Query: 74 TDINGQKIGDQATISYIKTTVE 95
G KI D+ + + + +E
Sbjct: 813 ESPEGGKIKDKEHANELVSALE 834
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LE+ T DR G+L D+ + + IR A IST G+ V D F + G + K
Sbjct: 769 LEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHIESPEGGKIKDK 823
>gi|302833812|ref|XP_002948469.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
gi|300266156|gb|EFJ50344.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
Length = 199
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 46/178 (25%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN ATV+ V+ + G LL+ I L +L L I +A +++ G FY+T
Sbjct: 3 PTVKIDNIRDPFATVLTVEYGEKTGELLDAITALKNLGLNIRRAKVNTGG----TTFYIT 58
Query: 75 DIN-GQKIGDQATISYIKTTVETNASFLNSMRS---SVGVVPSKEYTSIELTG------- 123
D + +KI A + I+ TV LNS+ + VG S S +L G
Sbjct: 59 DADTSEKIVKSARLEDIRMTV------LNSLVAKFPEVGEALSVGAKSNDLDGNKVLGTR 112
Query: 124 -------------------------TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARA 156
+DRPGLL ++ VL D++ +VVSAEI T A
Sbjct: 113 RKVVQTTIDIVEASNGSCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLA 170
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
L++ T DR GLL DI R+L++ L + AEI T G KD FF+T G P+ +V +
Sbjct: 133 LKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLAKDEFFIT-YHGEPLTTPMVTLV 191
Query: 388 QHQI 391
+ +
Sbjct: 192 TNAL 195
>gi|386818050|ref|ZP_10105268.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
gi|386422626|gb|EIJ36461.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
Length = 879
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFY 72
P + + V + V+ V S ++ + V+ L LNL + +A I S+ G+ + +
Sbjct: 685 PTLIHLRRTVSGSSNVLFVYSKDQDDLFSRVVSTLEQLNLNVVQARIVSTTDGFDLYTLH 744
Query: 73 VTDINGQKIGDQATISYIKTTVETNA-----------------SFLNSMRSSVGVVPSKE 115
+ + Q I A YI T+E N +F R S P K
Sbjct: 745 ILGPDNQLIISDADRQYIIDTLEANLERDISRQAALRKPRILRNFDVPTRVSFNQQPDKN 804
Query: 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQK 175
T IE+ D PGLLS + + L V +A I T +A + +V + G I D+
Sbjct: 805 LTLIEINTGDMPGLLSRLGEAMDGLGIRVHNARINTLGEQAQDIFYVTAR-DGSMITDET 863
Query: 176 RLLKIKKLLCNVLR 189
+ I+++L L+
Sbjct: 864 QQAHIREVLVQALK 877
>gi|375259081|ref|YP_005018251.1| PII uridylyl-transferase [Klebsiella oxytoca KCTC 1686]
gi|365908559|gb|AEX04012.1| PII uridylyl-transferase [Klebsiella oxytoca KCTC 1686]
Length = 887
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P + + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----------------------- 327
+ + DG P+S++ + + LE I +R+ +
Sbjct: 749 FIVLEPDGSPLSAD-RHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
LEL D+ GLL+ + ++ + G+ + A I+T+G +V+D F + A ++
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNN 867
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 868 ELQQEVQQRL 877
>gi|336248809|ref|YP_004592519.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
gi|334734865|gb|AEG97240.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
Length = 887
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P + + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 690 SKPMILLSSRATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----------------------- 327
+ + DG P+S++ + + LE I +R+ E
Sbjct: 749 FIVLEPDGSPLSAD-RHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPTH 807
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
LEL D+ GLL+ + ++ + G+ + A I+T+G +V+D F + A ++
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNN 867
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 868 ELQQEVQQRL 877
>gi|119898202|ref|YP_933415.1| PII uridylyl-transferase [Azoarcus sp. BH72]
gi|119670615|emb|CAL94528.1| putative protein-PII uridylyltransferase [Azoarcus sp. BH72]
Length = 861
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDAS 375
L L DR GLL D+ +L +YG+ ++ A+I+T+G +V+DTF +T A
Sbjct: 794 LSLVAADRPGLLFDVAEVLAKYGISLQTAKIATLGERVEDTFLLTGAG 841
>gi|238893163|ref|YP_002917897.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|330001644|ref|ZP_08304070.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|386033242|ref|YP_005953155.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|419975543|ref|ZP_14490952.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981409|ref|ZP_14496685.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986654|ref|ZP_14501784.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992331|ref|ZP_14507288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998633|ref|ZP_14513418.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004521|ref|ZP_14519157.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010288|ref|ZP_14524763.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016399|ref|ZP_14530691.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021806|ref|ZP_14535982.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027326|ref|ZP_14541320.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033248|ref|ZP_14547055.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038706|ref|ZP_14552350.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044836|ref|ZP_14558312.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050742|ref|ZP_14564038.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056029|ref|ZP_14569190.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060976|ref|ZP_14573970.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067686|ref|ZP_14580476.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072904|ref|ZP_14585537.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078757|ref|ZP_14591211.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|424829043|ref|ZP_18253771.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078298|ref|ZP_18481401.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079945|ref|ZP_18483042.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088930|ref|ZP_18492023.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090064|ref|ZP_18493149.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428931636|ref|ZP_19005229.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|428940394|ref|ZP_19013479.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|449058387|ref|ZP_21736596.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
gi|238545479|dbj|BAH61830.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328537586|gb|EGF63806.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|339760370|gb|AEJ96590.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|397342764|gb|EJJ35920.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397343243|gb|EJJ36392.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397347338|gb|EJJ40446.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359874|gb|EJJ52561.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397361256|gb|EJJ53921.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365516|gb|EJJ58139.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374980|gb|EJJ67288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397379053|gb|EJJ71253.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386391|gb|EJJ78474.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393624|gb|EJJ85377.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395588|gb|EJJ87293.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403997|gb|EJJ95529.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410579|gb|EJK01856.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397411053|gb|EJK02318.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421045|gb|EJK12081.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427733|gb|EJK18495.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397432077|gb|EJK22742.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438573|gb|EJK29065.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444465|gb|EJK34740.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|405590159|gb|EKB63693.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600068|gb|EKB73235.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405606870|gb|EKB79840.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405614628|gb|EKB87327.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|414706460|emb|CCN28164.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302350|gb|EKV64555.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|426307908|gb|EKV69981.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|448875381|gb|EMB10400.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
Length = 887
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D ++P + + + R T + I S DRP LF VC D + +
Sbjct: 676 QLAWHARNLLRHDL----NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 730
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISS---EAERQRVMACL-----EAAIERRASE 324
H + T R A + + DG P+S+ EA RQ + + + RR +
Sbjct: 731 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAA 790
Query: 325 GLE--------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
L LEL D+ GLL+ + ++ + G+ + A I+T+G +
Sbjct: 791 KLRHFSVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQI 391
V+D F + A ++ ++ +Q ++
Sbjct: 851 VEDLFIIATADRRALNNELQQEVQQRL 877
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P RV IDN+V TVI + + ++ G+L + L L L I + IS+ + DVFYV
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 TDINGQKIGDQATISYIK 91
DI G K+ + + I+
Sbjct: 868 KDIFGAKVMNPVKLEEIR 885
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+++Y D+ GLL IT L GL I ++IST +V D F+V D G V +P ++
Sbjct: 824 IDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGAKVMNPVKLEE 883
Query: 387 IQHQI 391
I+ ++
Sbjct: 884 IRKEL 888
>gi|90413527|ref|ZP_01221518.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
gi|90325459|gb|EAS41942.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
Length = 874
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 17/191 (8%)
Query: 6 AKLIRRMNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDG 64
A L + P +++ T + V + ++ + V+ L NL + A I +S
Sbjct: 673 ALLTHDHDKPLILLSKKATRGGTEVFVYNKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 732
Query: 65 GYLMDVFYVTDINGQKIGD--QATI--SYIKTTVETNASFLN----------SMRSSVGV 110
GY +D F V D +GQ I + TI + + + + N ++++ V
Sbjct: 733 GYTLDTFMVLDPSGQAIPENRHNTIRRALVNALTKMKSERKNKRAPRKLMHFNVKTQVDF 792
Query: 111 VPSK--EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSG 168
+P+K + T++EL D PGLL+ + AV S+ +A+I T RA + ++
Sbjct: 793 LPTKTGKKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERAEDFFILVNEHGS 852
Query: 169 CAIEDQKRLLK 179
E+ ++ LK
Sbjct: 853 PLTEEHQQALK 863
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+EL T D GLLS I +L ++ + + A+I+T+G + +D F+ TD NP+
Sbjct: 806 MELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQSNPI 857
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 112 PSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAI 171
P + +T +EL TD GLLS++ VL D + + A+I T +RA + + D S I
Sbjct: 799 PQRRFTVMELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQSN-PI 857
Query: 172 EDQKRLLKIKKLLCNVLR 189
+D + L +++ + + LR
Sbjct: 858 QDHETLQNLEQAIQSALR 875
>gi|300715394|ref|YP_003740197.1| [protein-PII] uridylyltransferase [Erwinia billingiae Eb661]
gi|299061230|emb|CAX58339.1| [Protein-PII] uridylyltransferase [Erwinia billingiae Eb661]
Length = 881
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
++P V + + R T + I S DRP LF TV D + + H + T R A
Sbjct: 684 TKPLVLVSPQATRGGTEIFIWSPDRP-YLFATVAGELDRRNLSVHDAQIFTSRDGMAMDT 742
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE-------------- 327
+ + DG P++++ + + LE +I RR S L+
Sbjct: 743 FIVLEPDGSPLAAD-RHEMIRQALEQSISQTSWQSPRPRRQSSRLKHFSVDTEAKFLPTH 801
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
+EL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ + P
Sbjct: 802 TDRRTYMELIALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALSP 861
Query: 382 KIVDSIQHQI 391
++ + +Q ++
Sbjct: 862 ELREVLQQRL 871
>gi|441145462|ref|ZP_20963771.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440621082|gb|ELQ84103.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 749
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
PPRV + + ATVI+V + + G+L + + L + + A++S+ G +D FYV
Sbjct: 664 PPRVTVAPGSSQSATVIEVRAQDAQGLLHRIGRALEAAGVTVRSAHVSTLGANAVDAFYV 723
Query: 74 TDINGQKIGDQAT 86
T G+ + D A
Sbjct: 724 TTEKGEPLPDAAA 736
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL I R L G+ +R A +ST+G D F+VT G P+ +
Sbjct: 680 IEVRAQDAQGLLHRIGRALEAAGVTVRSAHVSTLGANAVDAFYVTTEKGEPLPDAAATEV 739
Query: 388 QHQIGRTILQ 397
+ R + Q
Sbjct: 740 AQAVERALKQ 749
>gi|449533134|ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like, partial [Cucumis sativus]
Length = 224
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V+ID D + ATV+++ +R G LL+ + L +L L + KA + D + F +T
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DIN-GQKIGDQATISYIKTTVETN-------ASFLNSMRSSVGVVPSKEYTSIEL 121
+ G+K+ D + I+ T+ N +S +M ++ GVVP K+ +++
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLAMGAAFGVVPPKQQVDVDI 200
>gi|357160225|ref|XP_003578696.1| PREDICTED: uncharacterized protein LOC100833127 [Brachypodium
distachyon]
Length = 421
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 273 YVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEA---ERQRVMACLEAAIERRASEGLELE 329
Y+V GR A+ + V+ P+SS A L+ +E A L+
Sbjct: 61 YIVLWVVARRGRTMAWDLLKERLVELCPVSSLCGLDSSYLAAAGLQEDLEPAAPRVFLLK 120
Query: 330 LYTDDRFGLLSDITRILREYGLCIRRAEISTM--GRKVKDTFFVTDA 374
DR GLL D+T +L E L IRR ++ST GR V D FF+TDA
Sbjct: 121 FSCYDRMGLLHDVTHVLSEMELTIRRVKVSTTPDGR-VMDLFFITDA 166
>gi|357417896|ref|YP_004930916.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
gi|355335474|gb|AER56875.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
Length = 875
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVFYVTDINGQKIGDQA 85
A + V S +R G+ ++ L L I +A + G + D F + + D A
Sbjct: 695 AMEVFVHSPDRDGLFAAILATLDRLGFGIHQARVLMGPHGTVFDTFEILPADTYASADTA 754
Query: 86 TISYIKTTVETNASFLNSMRSSVGVVPSK------------------EYTSIELTGTDRP 127
T++ +T A L+ +R S VP + +T +EL DRP
Sbjct: 755 TVA--ETLRRALAGPLDQVRVSQRTVPRQLRHFRFPPRFEFGTTLDGRHTVLELVAPDRP 812
Query: 128 GLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQS 166
GLL++V+ VL V A I T RA + H+ D++
Sbjct: 813 GLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEA 851
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LEL DR GLL+ + ++LR L + A I+T G + +D F ++D + P+ + D++
Sbjct: 804 LELVAPDRPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEADRPLSGQARDAL 863
Query: 388 Q 388
+
Sbjct: 864 R 864
>gi|383642646|ref|ZP_09955052.1| PII uridylyl-transferase [Sphingomonas elodea ATCC 31461]
Length = 915
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT 74
P V IDN TVI+V++ +R +L + L + I A++++ G +D FY+T
Sbjct: 823 PNVFIDNKASNRFTVIEVNARDRPALLYSLANALFQSKVTIHSAHVATYGERAVDTFYLT 882
Query: 75 DINGQKIGDQATISYIK 91
D+ G KI + + I+
Sbjct: 883 DLIGDKISSTSRLKTIE 899
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 26/197 (13%)
Query: 110 VVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLH---VKDQS 166
V P + T + + D PGL ++ + +++ A I H R L V+D
Sbjct: 718 VYPDRGATLVTVYAADHPGLFYRIAGAIHVAGGNIIDARI--HTTRDGMALDNFLVQD-P 774
Query: 167 SGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERL 226
G +++ RL ++K + + L L + + R+ R
Sbjct: 775 FGQPFDEEARLNRLKTGIADALANRARLSERLKTKAPVRL------------------RA 816
Query: 227 DCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRME 286
D ++ P+V I + + +T + + ++DRP LL+ L + ++ V T
Sbjct: 817 DA--FSIEPNVFIDNKASNRFTVIEVNARDRPALLYSLANALFQSKVTIHSAHVATYGER 874
Query: 287 AYQEYYIKHVDGFPISS 303
A +Y+ + G ISS
Sbjct: 875 AVDTFYLTDLIGDKISS 891
>gi|302770887|ref|XP_002968862.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
gi|300163367|gb|EFJ29978.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
Length = 406
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 148/364 (40%), Gaps = 47/364 (12%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATI 87
TVI V+ ++ G+ ++ + + + L + + + +DG + + VF+ +I I
Sbjct: 18 TVITVNCPDKRGLGCDLTRIIFEFGLSLVRGDVQTDGRWCLLVFWAV----PRITTAKPI 73
Query: 88 SY-------IKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDL 140
+ I N F+ + P K + +++ DR GLL ++S +L +L
Sbjct: 74 QWGLLRKRMIAACPPENQVFV-PVDPDFVTSPLKLFL-LQVYSADRAGLLHDMSRILWEL 131
Query: 141 SCSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRTNGDLRTPSM 199
+V + T + + + D + ++R L++ + + N++ G L++
Sbjct: 132 ELTVHKVKASTCPDGKVIDFFIISDNK--LLLPSRERTLEVCERIKNLM---GGLQS-KC 185
Query: 200 SISSARVLHGERRLHQMLFADRDFERLDCVNYNSR-----PHVTILDCSDRDYTAVTIRS 254
+ A +G L L NS+ P VTI D +T + I
Sbjct: 186 ELKEAGPEYGGLMCTPALNLPPSVSELLSSGVNSQQNGDTPRVTIDDLLSPAHTLLQISC 245
Query: 255 KDRPKLLFDTVCCLTDMQYVVYHG-----TVVTGRMEAYQEYYIKHVDGFPISSEAERQR 309
+DR LL+D + L D Y V +G T+ GR E + +I DG + + E+Q+
Sbjct: 246 RDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEI--DLFITQADGRKL-VDPEKQK 302
Query: 310 VMA---------CLEAAIERRASE-----GLELELYTDDRFGLLSDITRILREYGLCIRR 355
+ L + R + +EL R +L D+T L+ +CI +
Sbjct: 303 ALCERVVRDVANPLWVTVLPRGPDSELFVATPIELSGKGRPRVLYDVTLALKMLDVCIFQ 362
Query: 356 AEIS 359
A+I
Sbjct: 363 ADIG 366
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 15 PRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS---DGGYLMDVF 71
PRV ID+ + T++Q+ +R G+L + ++ L D N + +S D G
Sbjct: 226 PRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEIDL 285
Query: 72 YVTDINGQKIGD-QATISYIKTTVETNASFLNSMRSSVGVVPSKEY---TSIELTGTDRP 127
++T +G+K+ D + + + V A+ L G P E T IEL+G RP
Sbjct: 286 FITQADGRKLVDPEKQKALCERVVRDVANPLWVTVLPRG--PDSELFVATPIELSGKGRP 343
Query: 128 GLLSEVSAVLTDLSCSVVSAEIWTHN 153
+L +V+ L L + A+I H
Sbjct: 344 RVLYDVTLALKMLDVCIFQADIGRHT 369
>gi|432552204|ref|ZP_19788938.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
gi|431087903|gb|ELD93824.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
Length = 890
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P V + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 693 SKPRVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 291 YYIKHVDGFPISSE--------AERQRVMACLEAAIERRASEGLE--------------- 327
+ + DG P+S++ E+ + + + RR L
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LEL D+ GLL+ + +I + G+ + A I+T+G +V+D F + A ++ +
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNE 871
Query: 383 IVDSIQHQI 391
+ + ++
Sbjct: 872 LQQEVHQRL 880
>gi|419761889|ref|ZP_14288140.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397745430|gb|EJK92637.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 887
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D ++P + + + R T + I S DRP LF VC D + +
Sbjct: 676 QLAWHARNLLRHDL----NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 730
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISS---EAERQRVMACL-----EAAIERRASE 324
H + T R A + + DG P+S+ EA RQ + + + RR +
Sbjct: 731 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAA 790
Query: 325 GLE--------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
L LEL D+ GLL+ + ++ + G+ + A I+T+G +
Sbjct: 791 KLRHFSVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQI 391
V+D F + A ++ ++ +Q ++
Sbjct: 851 VEDLFIIATADRRALNNELQQEVQQRL 877
>gi|397656053|ref|YP_006496755.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca E718]
gi|394344683|gb|AFN30804.1| [Protein-PII] uridylyltransferase [Klebsiella oxytoca E718]
Length = 887
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P + + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----------------------- 327
+ + DG P+S++ + + LE I +R+ +
Sbjct: 749 FIVLEPDGSPLSAD-RHEMIRVGLEQTISQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
LEL D+ GLL+ + ++ + G+ + A I+T+G +V+D F + A ++
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNN 867
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 868 ELQQEVQQRL 877
>gi|392408543|ref|YP_006445150.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
gi|390621679|gb|AFM22886.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
Length = 889
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P +V +DN + +T+I+V + +R G+L ++ + L L L I+ I+++ D+FYV
Sbjct: 789 PLKVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYV 848
Query: 74 TDINGQKIGDQATISYIKTTVETN 97
D G KI D + I+++++ +
Sbjct: 849 QDEFGNKIMDFDRMEEIRSSLKNH 872
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 25/185 (13%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATI 87
+ I + + +R G+ + + + I A+ S G + F+V DI + D A
Sbjct: 690 SAITLLTRDRRGLFFRIAGTMSANRINILSAWTHSIGSVAVATFHVNDIPEGPLNDPARW 749
Query: 88 S--------YIKTTVETNASFLNSMRS-------SVGVVP---------SKEYTSIELTG 123
+K V+ + L RS SV P S T IE+
Sbjct: 750 EGFKSDFRKVLKGEVDVDELVLARRRSRRPFGTSSVPRFPLKVQVDNAASDRSTIIEVYA 809
Query: 124 TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKL 183
DRPGLL +++ LT L ++ +I T +AA + +V+D+ G I D R+ +I+
Sbjct: 810 HDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQDE-FGNKIMDFDRMEEIRSS 868
Query: 184 LCNVL 188
L N L
Sbjct: 869 LKNHL 873
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+E+Y DR GLL DITR L GL I +I+T + D F+V D GN +
Sbjct: 805 IEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQDEFGNKI 856
>gi|365142822|ref|ZP_09347861.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363651116|gb|EHL90197.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 887
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D ++P + + + R T + I S DRP LF VC D + +
Sbjct: 676 QLAWHARNLLRHDL----NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 730
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISS---EAERQRVMACL-----EAAIERRASE 324
H + T R A + + DG P+S+ EA RQ + + + RR +
Sbjct: 731 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAA 790
Query: 325 GLE--------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
L LEL D+ GLL+ + ++ + G+ + A I+T+G +
Sbjct: 791 KLRHFSVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQI 391
V+D F + A ++ ++ +Q ++
Sbjct: 851 VEDLFIIATADRRALNNELQQEVQQRL 877
>gi|432452920|ref|ZP_19695167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|433031572|ref|ZP_20219397.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
gi|430975514|gb|ELC92409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|431561507|gb|ELI34876.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
Length = 890
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P V + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 291 YYIKHVDGFPISSEAERQRVM----------ACLEAAIERRASEGLE------------- 327
+ + DG P+S A+R V+ + + RR L
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 328 -------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
LEL D+ GLL+ + +I + G+ + A I+T+G +V+D F + A ++
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 381 PKIVDSIQHQI 391
++ +Q ++
Sbjct: 870 NELQQEVQQRL 880
>gi|423111378|ref|ZP_17099072.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5243]
gi|423112603|ref|ZP_17100294.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5245]
gi|376376577|gb|EHS89354.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5243]
gi|376390980|gb|EHT03662.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5245]
Length = 887
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P + + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 690 SKPMILLSSHASRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----------------------- 327
+ + DG P+S++ + + LE I +R+ +
Sbjct: 749 FIVLEPDGSPLSAD-RHEMIRVGLEQTITQRSWQPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
LEL D+ GLL+ + ++ + G+ + A I+T+G +V+D F + A ++
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNN 867
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 868 ELQQEVQQRL 877
>gi|336322370|ref|YP_004602337.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
gi|336105951|gb|AEI13769.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
Length = 863
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 16 RVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTD 75
++V DND+ TV+ V + ++ G+L ++ +++ + KA IS+D ++D FY+ D
Sbjct: 777 KIVFDNDISTLYTVVDVYTEDKVGLLYNLLTVFEKMHINVVKAKISTDVDRVVDSFYIID 836
Query: 76 INGQKIGDQATISYIKT 92
N K+ + IS IKT
Sbjct: 837 KNKNKVTGDSEISRIKT 853
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR G+L I R L E L + A ++T+G V D F+V +A G PV D+
Sbjct: 697 LEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQEADGRPV---ADDTR 753
Query: 388 QHQIGRTILQVKGNLNTP--PKLPQEPARS 415
+ +I R +L G + P P P E A S
Sbjct: 754 RREIARAVLAALGVEDLPDQPAPPAERASS 783
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
PP+V+ D D TV++V + +R G+L +++ L +L L + A +++ G ++D FY
Sbjct: 681 GPPQVIFD-DGLGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFY 739
Query: 73 VTDINGQKIGD 83
V + +G+ + D
Sbjct: 740 VQEADGRPVAD 750
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+RD+ P V I D T + +R+ DR +LF V L++++ V
Sbjct: 668 ERDYSGAKQWTTPGPPQV-IFDDGLGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAI 726
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
V T ++ +Y++ DG P++ + R+ + + AA+
Sbjct: 727 VATLGLDVVDAFYVQEADGRPVADDTRRREIARAVLAAL 765
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL +++ ++ LS ++ SA + T R + +V D G I
Sbjct: 858 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDL-MGAQIT 916
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L +N D
Sbjct: 917 APTRQAAIKRALVHLL-SNAD 936
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 20 DNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQ 79
+N E TVI+V ++R G+L ++ + L+L I A++++ G + DVFYVTD+ G
Sbjct: 854 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 913
Query: 80 KI 81
+I
Sbjct: 914 QI 915
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +T + + L I A ++T G +V+D F+VTD G + +
Sbjct: 864 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQI---TAPTR 920
Query: 388 QHQIGRTILQVKGN 401
Q I R ++ + N
Sbjct: 921 QAAIKRALVHLLSN 934
>gi|444353052|ref|YP_007389196.1| [Protein-PII] uridylyltransferase (EC 2.7.7.59) [Enterobacter
aerogenes EA1509E]
gi|443903882|emb|CCG31656.1| [Protein-PII] uridylyltransferase (EC 2.7.7.59) [Enterobacter
aerogenes EA1509E]
Length = 867
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P + + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 670 SKPMILLSSRATRGGTEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 728
Query: 291 YYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE----------------------- 327
+ + DG P+S++ + + LE I +R+ E
Sbjct: 729 FIVLEPDGSPLSAD-RHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPTH 787
Query: 328 ------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDP 381
LEL D+ GLL+ + ++ + G+ + A I+T+G +V+D F + A ++
Sbjct: 788 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRALNN 847
Query: 382 KIVDSIQHQI 391
++ +Q ++
Sbjct: 848 ELQQEVQQRL 857
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 744
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P+S + ++ LE AI RR + L+
Sbjct: 745 IVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D +
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 383 IVDSIQHQI 391
+ ++Q ++
Sbjct: 864 MRQTLQQRL 872
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDV 70
+N P V++ T I + S +R + V L NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVVPSK- 114
F V + +G + +QA ++ A+ L S+ + V +P+
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 115 -EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
+ +EL D+PGLL+ V V DL S+ A I T R L + + E+
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 174 QKRLLK 179
++ L+
Sbjct: 864 MRQTLQ 869
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
+ DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV ++
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 77 NGQKIGDQ 84
G K +Q
Sbjct: 902 FGLKYHEQ 909
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 23/187 (12%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
++ T + D PG+ S + L+ + +VV A +T + A A V+D S G E
Sbjct: 740 RDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQD-SDGTPFE 798
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
+ RL +++K++ R LHG+ + + FADRD + +
Sbjct: 799 -ETRLPRLRKMI-------------------ERTLHGDI-VPREAFADRDKIKKRERAFR 837
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
+T + YT + + ++DRP LL D L + + + T + +Y
Sbjct: 838 VSTSITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFY 897
Query: 293 IKHVDGF 299
+K++ G
Sbjct: 898 VKNMFGL 904
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV-DPKIVDS 386
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V + G + + D+
Sbjct: 855 IEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNMFGLKYHEQEKCDA 914
Query: 387 IQHQIGRTILQ 397
++ ++ I+Q
Sbjct: 915 LERKLHEAIVQ 925
>gi|167950394|ref|ZP_02537468.1| UTP-GlnB uridylyltransferase, GlnD [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 346
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R+ D+ H T +++ +++R G+L EV Q + + + A IS+ G + D+F++
Sbjct: 256 PTRIFFSQDLTHHRTTMRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFI 315
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + ++ + ++ ++
Sbjct: 316 TDRDKQPLQEEQQLECLRRSI 336
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+ L T DR GLLS++ + G+ ++ A+IST+G +V+D FF+TD P+
Sbjct: 272 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPL 323
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD-GGYL-MDVFYVT 74
V +DN + T++Q+ V++ G+ ++++ DLN+ + SS GY MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSV-GVVPSKEY---TSIELTGTDRPGLL 130
+G+KI D + + + ++ L+ +R + P E +EL G RP +
Sbjct: 302 QTDGKKILDPKLLDNLCSRLK--EEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVF 359
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNAR 155
+V+ L L + SAEI H+ +
Sbjct: 360 YDVTLALKKLGICIFSAEIGRHSTQ 384
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIE 172
S+ YT IE++G DRPGLL +++ ++ LS ++ SA + T R + +V D G I
Sbjct: 855 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDL-MGAQIT 913
Query: 173 DQKRLLKIKKLLCNVLRTNGD 193
R IK+ L ++L +N D
Sbjct: 914 APTRQAAIKRALVHLL-SNAD 933
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 20 DNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQ 79
+N E TVI+V ++R G+L ++ + L+L I A++++ G + DVFYVTD+ G
Sbjct: 851 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 910
Query: 80 KI 81
+I
Sbjct: 911 QI 912
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ DR GLL +T + + L I A ++T G +V+D F+VTD G + +
Sbjct: 861 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQI---TAPTR 917
Query: 388 QHQIGRTILQVKGN 401
Q I R ++ + N
Sbjct: 918 QAAIKRALVHLLSN 931
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 744
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P+S + ++ LE AI RR + L+
Sbjct: 745 IVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D +
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 383 IVDSIQHQI 391
+ ++Q ++
Sbjct: 864 MRQTLQQRL 872
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDV 70
+N P V++ T I + S +R + V L NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVVPSK- 114
F V + +G + +QA ++ A+ L S+ + V +P+
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 115 -EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
+ +EL D+PGLL+ V V DL S+ A I T R L + + E+
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 174 QKRLLK 179
++ L+
Sbjct: 864 MRQTLQ 869
>gi|343925318|ref|ZP_08764843.1| PII uridylyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343764757|dbj|GAA11769.1| PII uridylyltransferase [Gordonia alkanivorans NBRC 16433]
Length = 822
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 317 AIERRASEG-LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTF 369
A E A+EG + LE+ +DDR GLLS ++ +L ++G IR A++ST+G V D F
Sbjct: 714 APEPDAAEGAVLLEVRSDDRIGLLSRVSSVLEKFGADIRWAKVSTLGATVVDIF 767
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 685 NQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 744
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P+S + ++ LE AI RR + L+
Sbjct: 745 IVLEPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++ +D +
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 383 IVDSIQHQI 391
+ ++Q ++
Sbjct: 864 MRQTLQQRL 872
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDV 70
+N P V++ T I + S +R + V L NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FYVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVVPSK- 114
F V + +G + +QA ++ A+ L S+ + V +P+
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 115 -EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIED 173
+ +EL D+PGLL+ V V DL S+ A I T R L + + E+
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEE 863
Query: 174 QKRLLK 179
++ L+
Sbjct: 864 MRQTLQ 869
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFY 72
PP+V+ D D TV++V + +R G+L +++ L L L + A +++ G ++D FY
Sbjct: 681 GPPQVIFD-DGLGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFY 739
Query: 73 VTDINGQKIGDQA 85
V + +G+ + D A
Sbjct: 740 VQEADGRPVADDA 752
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
LE+ DR G+L I R L L + A ++T+G V D F+V +A G PV D+
Sbjct: 697 LEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQEADGRPV---ADDAR 753
Query: 388 QHQIGRTILQVKGNLNTP 405
+ +I R +L G + P
Sbjct: 754 RREIARAVLAALGTGDLP 771
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 220 DRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGT 279
+RD+ P V I D T + +R+ DR +LF V L+ ++ V
Sbjct: 668 ERDYSGAKQWTTPGPPQV-IFDDGLGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAI 726
Query: 280 VVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI 318
V T ++ +Y++ DG P++ +A R+ + + AA+
Sbjct: 727 VATLGLDVVDAFYVQEADGRPVADDARRREIARAVLAAL 765
>gi|126724979|ref|ZP_01740822.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2150]
gi|126706143|gb|EBA05233.1| PII uridylyl-transferase [Rhodobacteraceae bacterium HTCC2150]
Length = 920
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P + DN+ + T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV
Sbjct: 827 PTTITFDNEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYV 886
Query: 74 TDINGQKI---GDQATIS 88
D+ G K G Q T+
Sbjct: 887 KDMFGLKFHNEGKQRTLE 904
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+ R L + I A I+T G +V DTF+V D G
Sbjct: 843 IEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVKDMFG 891
>gi|444432133|ref|ZP_21227292.1| protein-PII uridylyltransferase [Gordonia soli NBRC 108243]
gi|443886962|dbj|GAC69013.1| protein-PII uridylyltransferase [Gordonia soli NBRC 108243]
Length = 877
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTF--FVTDAS 375
+EL TDDR GLLS ++ ++ G +R A++ST+G V DTF F+ D S
Sbjct: 783 MELRTDDRLGLLSRVSSVIERRGADVRWAKVSTLGSTVVDTFSLFIPDDS 832
>gi|378977073|ref|YP_005225214.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402782334|ref|YP_006637880.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|421913573|ref|ZP_16343250.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421919192|ref|ZP_16348698.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428148700|ref|ZP_18996553.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|364516484|gb|AEW59612.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402543196|gb|AFQ67345.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|410112518|emb|CCM85875.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410118484|emb|CCM91323.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|427541341|emb|CCM92691.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 867
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 215 QMLFADRDFERLDCVNYNSRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYV 274
Q+ + R+ R D ++P + + + R T + I S DRP LF VC D + +
Sbjct: 656 QLAWHARNLLRHDL----NKPMILLSSQATRGGTEIFIWSPDRP-YLFAAVCGELDRRNL 710
Query: 275 VYH-GTVVTGR-MEAYQEYYIKHVDGFPISS---EAERQRVMACL-----EAAIERRASE 324
H + T R A + + DG P+S+ EA RQ + + + RR +
Sbjct: 711 SVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEAIRQGLEQTITQRSWQPPAPRRQAA 770
Query: 325 GLE--------------------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK 364
L LEL D+ GLL+ + ++ + G+ + A I+T+G +
Sbjct: 771 KLRHFSVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 830
Query: 365 VKDTFFVTDASGNPVDPKIVDSIQHQI 391
V+D F + A ++ ++ +Q ++
Sbjct: 831 VEDLFIIATADRRALNNELQQEVQQRL 857
>gi|312173391|emb|CBX81645.1| protein-P-II uridylyltransferase [Erwinia amylovora ATCC BAA-2158]
Length = 801
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
+P V + + R T + I S DRP L V L V+ + T R A +
Sbjct: 604 GKPLVLVSPLATRGGTEIFIWSPDRPYLFAAVVGELERRNLSVHDAQIFTSRDGMAMDTF 663
Query: 292 YIKHVDGFPISS---EAERQRVMACLEAAI---------ERRASEGLE------------ 327
+ DG P+++ EA R LE AI RR S L
Sbjct: 664 IVLEPDGSPLATDRHEATRH----ALEQAICQTDWQPPRARRQSARLRHFNVETAVNFLP 719
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL D+ G L+ + + + G+ + A IST+G +V+D F + D+ +
Sbjct: 720 THTDRRTYLELVALDQPGFLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRAL 779
Query: 380 DPKIVDSIQHQIGRTI 395
+ ++ + +Q ++ + +
Sbjct: 780 NTELREVLQQRLTKAL 795
>gi|292489230|ref|YP_003532117.1| protein-P-II uridylyltransferase [Erwinia amylovora CFBP1430]
gi|292898537|ref|YP_003537906.1| [protein-PII] uridylyltransferase [Erwinia amylovora ATCC 49946]
gi|428786191|ref|ZP_19003673.1| protein-P-II uridylyltransferase [Erwinia amylovora ACW56400]
gi|291198385|emb|CBJ45492.1| [protein-PII] uridylyltransferase [Erwinia amylovora ATCC 49946]
gi|291554664|emb|CBA22361.1| protein-P-II uridylyltransferase [Erwinia amylovora CFBP1430]
gi|426275319|gb|EKV53055.1| protein-P-II uridylyltransferase [Erwinia amylovora ACW56400]
Length = 885
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
+P V + + R T + I S DRP L V L V+ + T R A +
Sbjct: 688 GKPLVLVSPLATRGGTEIFIWSPDRPYLFAAVVGELERRNLSVHDAQIFTSRDGMAMDTF 747
Query: 292 YIKHVDGFPISS---EAERQRVMACLEAAI---------ERRASEGLE------------ 327
+ DG P+++ EA R LE AI RR S L
Sbjct: 748 IVLEPDGSPLATDRHEATRH----ALEQAICQTDWQPPRARRQSARLRHFNVETAVNFLP 803
Query: 328 --------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
LEL D+ G L+ + + + G+ + A IST+G +V+D F + D+ +
Sbjct: 804 THTDRRTYLELVALDQPGFLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRAL 863
Query: 380 DPKIVDSIQHQIGRTI 395
+ ++ + +Q ++ + +
Sbjct: 864 NTELREVLQQRLTKAL 879
>gi|429064588|ref|ZP_19128488.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
gi|427337371|gb|EKW98289.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
Length = 890
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYH-GTVVTGR-MEAYQE 290
S+P V + + R T + I S DRP LF VC D + + H + T R A
Sbjct: 693 SKPLVLLSPQATRGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 291 YYIKHVDGFPISSEAERQRVM----------ACLEAAIERRASEGLE------------- 327
+ + DG P+S A+R V+ + + RR L
Sbjct: 752 FIVLEPDGSPLS--ADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPT 809
Query: 328 -------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380
LEL D+ GLL+ + +I + G+ + A I+T+G +V+D F + A ++
Sbjct: 810 HTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALN 869
Query: 381 PKIVDSIQHQIGRTI 395
++ + ++ T+
Sbjct: 870 NELQQEVHQRLTETL 884
>gi|302522151|ref|ZP_07274493.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase [Streptomyces
sp. SPB78]
gi|302431046|gb|EFL02862.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase [Streptomyces
sp. SPB78]
Length = 685
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL + + L G+ +R A ST+G D F+VT G P+ P + ++
Sbjct: 617 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 676
Query: 388 QHQIGRTI 395
++ RT+
Sbjct: 677 AAELERTL 684
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V + + R T + I S DRP L L V+ + T R A +
Sbjct: 687 NKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 746
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P++++ ++ LE AI RR S L+
Sbjct: 747 IVLEPDGSPLAAD-RHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + D+ + +
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALGVE 865
Query: 383 IVDSIQHQI 391
+ D +Q ++
Sbjct: 866 MRDVLQQRL 874
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 12 MNPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDV 70
+N P V++ T I + S +R + V L NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FYVTDINGQKIG-----------DQA--TISYIKTTVETNASFLN--SMRSSVGVVPSK- 114
F V + +G + +QA ++ ++ L S+ + V +P+
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 115 -EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD---QSSGCA 170
+ +EL D+PGLL+ V V DL S+ A I T R L + D ++ G
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALGVE 865
Query: 171 IED--QKRL 177
+ D Q+RL
Sbjct: 866 MRDVLQQRL 874
>gi|329296138|ref|ZP_08253474.1| PII uridylyl-transferase [Plautia stali symbiont]
Length = 880
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 32/194 (16%)
Query: 229 VNYN-SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-ME 286
+N++ S+P V + + R T + I S DRP L L V+ + T R
Sbjct: 678 INHDLSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 737
Query: 287 AYQEYYIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE---------- 327
A + + DG P++ + ++ LE AI RR S L+
Sbjct: 738 AMDTFIVLEPDGSPLAPD-RHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNF 796
Query: 328 ----------LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGN 377
LEL D+ GLL+ + + + G+ + A IST+G +V+D F + ++
Sbjct: 797 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERR 856
Query: 378 PVDPKIVDSIQHQI 391
+D ++ +Q ++
Sbjct: 857 ALDAEMRSVLQQRL 870
>gi|345865282|ref|ZP_08817470.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345876936|ref|ZP_08828696.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226044|gb|EGV52387.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123611|gb|EGW53503.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 884
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYV 73
P R+ D+ H T +++ +++R G+L EV Q + + + A IS+ G + D+F++
Sbjct: 794 PTRIFFSQDLTHHRTTMRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFI 853
Query: 74 TDINGQKIGDQATISYIKTTV 94
TD + Q + ++ + ++ ++
Sbjct: 854 TDRDKQPLQEEQQLECLRRSI 874
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379
+ L T DR GLLS++ + G+ ++ A+IST+G +V+D FF+TD P+
Sbjct: 810 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPL 861
>gi|318080611|ref|ZP_07987943.1| PII uridylyl-transferase [Streptomyces sp. SA3_actF]
Length = 460
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL + + L G+ +R A ST+G D F+VT G P+ P + ++
Sbjct: 392 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 451
Query: 388 QHQIGRTI 395
++ RT+
Sbjct: 452 AAELERTL 459
>gi|295836297|ref|ZP_06823230.1| protein-P-II uridylyltransferase [Streptomyces sp. SPB74]
gi|295825942|gb|EFG64557.1| protein-P-II uridylyltransferase [Streptomyces sp. SPB74]
Length = 506
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL + L G+ +R A ST+G D F+VT A G+P+ P + ++
Sbjct: 438 IEVRAQDAPGLLHRLGLALDNAGVRVRSAHASTLGANAVDAFYVTGADGDPLAPDVASAL 497
Query: 388 QHQIGRTI 395
++ RT+
Sbjct: 498 AAELERTL 505
>gi|333024177|ref|ZP_08452241.1| putative protein P-II uridylyltransferase [Streptomyces sp. Tu6071]
gi|332744029|gb|EGJ74470.1| putative protein P-II uridylyltransferase [Streptomyces sp. Tu6071]
Length = 834
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSI 387
+E+ D GLL + + L G+ +R A ST+G D F+VT G P+ P + ++
Sbjct: 766 IEVRAQDAPGLLHRLGQALENAGVRVRSAHASTLGANAVDAFYVTGPDGGPLAPDVASAL 825
Query: 388 QHQIGRTI 395
++ RT+
Sbjct: 826 ASELERTL 833
>gi|255575072|ref|XP_002528441.1| amino acid binding protein, putative [Ricinus communis]
gi|223532117|gb|EEF33924.1| amino acid binding protein, putative [Ricinus communis]
Length = 420
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 154/364 (42%), Gaps = 41/364 (11%)
Query: 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVT------DINGQKI 81
TV+ V+ ++ G+ ++ + +++ L I++A S+DG + VF+V +N +
Sbjct: 22 TVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHSTSHKVNWDSL 81
Query: 82 GDQATISYIKTTVETNASFLNSMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLS 141
++ + + + F +S+V VPS ++ DR GLL +V+ +LT+L
Sbjct: 82 KNRLSCA----SPPCLGPFYFDQKSNVTSVPS--LYLLKFCFVDRKGLLHDVAKILTELE 135
Query: 142 CSVVSAEIWT-HNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLR---TNGDLRTP 197
++ ++ T + + L + D + +KR + L +V + + +L+
Sbjct: 136 FTIQRVKVMTTPDGKVVDLFFITDGLD--LLHTEKRRSDTCRHLASVFKECCISCELQLA 193
Query: 198 SMSISSARVLHG-ERRLHQMLFADRDFERLDCVN------YNSRPHVTILDCSDRDYTAV 250
S + + + LF+ E C + VT+ + +T +
Sbjct: 194 GPEYESLQAFSSLPLPIAEELFSCEQLEEKTCSQALCTDTIADKATVTVDNNMSPAHTLL 253
Query: 251 TIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQ--EYYIKHVDGFPISSEAERQ 308
++ D+ L +D + D V +G + ++ Y+ + +I+ DG I +
Sbjct: 254 QLKCIDQKGLFYDILRTSKDCNIRVAYGRF-SSSLKGYRNMDLFIQQTDGKKIMDPKHQL 312
Query: 309 RVMACLEAAIERR-----ASEGLELELYTDD--------RFGLLSDITRILREYGLCIRR 355
+ + L+A + R A+ G + EL + R + D+T L+ G+CI
Sbjct: 313 MLCSRLKAEMLRPFRVIIANRGPDTELLVANPVELSGKGRPRVFYDVTLALKTLGICIFS 372
Query: 356 AEIS 359
AEI+
Sbjct: 373 AEIA 376
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD-GGYL-MDVFYVT 74
V +DN++ T++Q+ +++ G+ ++++ D N+ + SS GY MD+F +
Sbjct: 240 VTVDNNMSPAHTLLQLKCIDQKGLFYDILRTSKDCNIRVAYGRFSSSLKGYRNMDLF-IQ 298
Query: 75 DINGQKIGDQATISYIKTTVETNASFLNSMRSSVG-VVPSKEY---TSIELTGTDRPGLL 130
+G+KI D + A L R + P E +EL+G RP +
Sbjct: 299 QTDGKKIMDPK--HQLMLCSRLKAEMLRPFRVIIANRGPDTELLVANPVELSGKGRPRVF 356
Query: 131 SEVSAVLTDLSCSVVSAEIWTHNAR 155
+V+ L L + SAEI H+ +
Sbjct: 357 YDVTLALKTLGICIFSAEIARHSTQ 381
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEY 291
++P V I + R T + I S DRP L L V+ + T R A +
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 763
Query: 292 YIKHVDGFPISSEAERQRVMACLEAAIE---------RRASEGLE--------------- 327
+ DG P++ + + + LE A+ RR S L
Sbjct: 764 IVLEPDGSPLAQD-RHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHT 822
Query: 328 -----LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPK 382
+EL D+ GLL+ I I + L + A IST+G +V+D F + D+ + P+
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILADSDRRALKPE 882
Query: 383 IVDSIQHQIGRTI 395
+ +Q ++ +
Sbjct: 883 LRLKLQERLTEAL 895
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 13 NPPRVVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYI-SSDGGYLMDVF 71
N P V+I + T I + S +R + V L NL + A I +S G MD F
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 763
Query: 72 YVTDINGQKIG-----------DQATIS--YIKTTVETNASFLN--SMRSSVGVVPSK-- 114
V + +G + +QA Y V + L S+ + V +P+
Sbjct: 764 IVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHTD 823
Query: 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQ 174
+ +EL+ D+PGLL+ + + +DL+ S+ A I T R L + D S A++ +
Sbjct: 824 RRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILAD-SDRRALKPE 882
Query: 175 KRLLKIKKLLCNVLRTN 191
R LK+++ L L N
Sbjct: 883 LR-LKLQERLTEALNPN 898
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 17 VVIDNDVCEHATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76
+ DN+ E T+I+VD+ +R G+L ++ + L + N+ I A I++ G ++D FYV D+
Sbjct: 847 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDM 906
Query: 77 NGQKIGDQA 85
G K Q
Sbjct: 907 FGLKYHAQG 915
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 23/206 (11%)
Query: 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HNARAAALLHVKDQSSGCAIE 172
++ T + D PG+ S + L+ + +VV A +T + A A V+D S G E
Sbjct: 745 RDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQD-SEGTPYE 803
Query: 173 DQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYN 232
D +R P + R L GE L A +D + +
Sbjct: 804 D--------------------IRLPRLREVIERTLKGEVVARDAL-AGKDKVKKREKAFR 842
Query: 233 SRPHVTILDCSDRDYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYY 292
+ +T + YT + + ++DRP LL D L + + + T + +Y
Sbjct: 843 VKTSITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFY 902
Query: 293 IKHVDGFPISSEAERQRVMACLEAAI 318
+K + G ++ +R + L AI
Sbjct: 903 VKDMFGLKYHAQGKRDALENKLHEAI 928
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASG 376
+E+ T DR GLL D+TR L + I A I+T G +V DTF+V D G
Sbjct: 860 IEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFG 908
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,450,041,737
Number of Sequences: 23463169
Number of extensions: 255711056
Number of successful extensions: 606919
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 440
Number of HSP's that attempted gapping in prelim test: 598232
Number of HSP's gapped (non-prelim): 6179
length of query: 437
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 291
effective length of database: 8,933,572,693
effective search space: 2599669653663
effective search space used: 2599669653663
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)