Query 013722
Match_columns 437
No_of_seqs 311 out of 1914
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 15:53:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013722.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013722hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 1.8E-17 6.2E-22 152.9 16.8 157 26-190 4-165 (195)
2 2nyi_A Unknown protein; protei 99.8 4.3E-18 1.5E-22 157.1 11.9 142 246-393 4-161 (195)
3 1u8s_A Glycine cleavage system 99.7 8.3E-16 2.8E-20 141.2 15.9 138 247-393 6-164 (192)
4 1u8s_A Glycine cleavage system 99.7 1.6E-15 5.4E-20 139.3 17.6 155 26-190 5-168 (192)
5 3p96_A Phosphoserine phosphata 98.8 1.1E-07 3.8E-12 96.8 17.3 151 26-190 11-168 (415)
6 2f06_A Conserved hypothetical 98.6 1.6E-06 5.5E-11 75.1 16.3 129 248-398 7-135 (144)
7 2f06_A Conserved hypothetical 98.6 1.5E-06 5.2E-11 75.3 15.7 113 27-162 6-118 (144)
8 3p96_A Phosphoserine phosphata 98.6 2.6E-06 8.8E-11 86.6 18.7 122 246-372 11-149 (415)
9 1zpv_A ACT domain protein; str 98.2 6.5E-06 2.2E-10 65.3 9.4 67 115-188 4-70 (91)
10 1zpv_A ACT domain protein; str 98.1 2.3E-05 8E-10 62.0 10.6 51 26-76 4-54 (91)
11 2ko1_A CTR148A, GTP pyrophosph 98.0 4.3E-05 1.5E-09 59.8 9.9 64 115-185 4-67 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 4.1E-05 1.4E-09 59.9 8.9 63 326-393 6-68 (88)
13 3l76_A Aspartokinase; alloster 97.9 0.0036 1.2E-07 66.5 25.3 268 26-357 269-562 (600)
14 3obi_A Formyltetrahydrofolate 97.6 0.0011 3.9E-08 63.9 15.6 118 26-151 5-124 (288)
15 3o1l_A Formyltetrahydrofolate 97.6 0.00061 2.1E-08 66.3 13.3 66 26-96 21-88 (302)
16 2re1_A Aspartokinase, alpha an 97.5 0.0021 7.1E-08 56.9 14.1 114 245-372 23-149 (167)
17 3n0v_A Formyltetrahydrofolate 97.5 0.002 6.9E-08 62.2 15.0 65 26-96 7-73 (286)
18 2re1_A Aspartokinase, alpha an 97.5 0.0023 7.9E-08 56.6 14.1 111 25-148 23-138 (167)
19 3nrb_A Formyltetrahydrofolate 97.4 0.0021 7.4E-08 62.0 14.3 116 26-151 6-123 (287)
20 3lou_A Formyltetrahydrofolate 97.3 0.0025 8.4E-08 61.7 13.7 48 26-73 9-58 (292)
21 2dtj_A Aspartokinase; protein- 97.3 0.0088 3E-07 53.4 15.9 111 25-148 13-130 (178)
22 2dtj_A Aspartokinase; protein- 97.2 0.0025 8.5E-08 57.0 11.2 114 245-372 13-141 (178)
23 2f1f_A Acetolactate synthase i 97.0 0.0018 6.2E-08 57.3 8.4 64 116-187 3-68 (164)
24 3nrb_A Formyltetrahydrofolate 97.0 0.002 6.8E-08 62.2 9.1 37 115-151 6-42 (287)
25 2f1f_A Acetolactate synthase i 97.0 0.002 6.9E-08 57.0 8.2 62 326-393 4-67 (164)
26 3n0v_A Formyltetrahydrofolate 97.0 0.016 5.4E-07 55.9 15.0 104 247-356 8-121 (286)
27 3obi_A Formyltetrahydrofolate 96.9 0.022 7.5E-07 54.9 15.7 107 247-358 6-122 (288)
28 2dt9_A Aspartokinase; protein- 96.9 0.0024 8.2E-08 56.5 8.3 109 25-147 14-129 (167)
29 2dt9_A Aspartokinase; protein- 96.9 0.0031 1.1E-07 55.7 8.8 118 245-372 14-141 (167)
30 2pc6_A Probable acetolactate s 96.9 0.0029 9.9E-08 56.0 8.4 64 116-187 4-69 (165)
31 3o1l_A Formyltetrahydrofolate 96.9 0.022 7.4E-07 55.3 15.2 106 248-358 23-138 (302)
32 3lou_A Formyltetrahydrofolate 96.8 0.025 8.4E-07 54.7 15.1 108 247-358 10-128 (292)
33 2pc6_A Probable acetolactate s 96.8 0.0036 1.2E-07 55.3 8.2 62 326-393 5-68 (165)
34 3l76_A Aspartokinase; alloster 96.6 0.16 5.5E-06 53.9 21.0 191 25-279 353-562 (600)
35 2jhe_A Transcription regulator 96.6 0.0079 2.7E-07 52.8 8.9 36 327-362 2-37 (190)
36 2fgc_A Acetolactate synthase, 96.4 0.11 3.7E-06 46.8 15.5 130 27-185 29-167 (193)
37 3s1t_A Aspartokinase; ACT doma 96.4 0.018 6E-07 51.7 10.4 110 26-148 15-131 (181)
38 2fgc_A Acetolactate synthase, 96.3 0.017 5.9E-07 52.1 9.6 68 115-190 28-97 (193)
39 3s1t_A Aspartokinase; ACT doma 96.0 0.025 8.7E-07 50.6 9.1 106 246-357 15-131 (181)
40 2jhe_A Transcription regulator 95.8 0.035 1.2E-06 48.6 9.2 59 118-186 2-60 (190)
41 3ab4_A Aspartokinase; aspartat 95.8 0.11 3.8E-06 52.6 14.0 130 245-396 262-406 (421)
42 4go7_X Aspartokinase; transfer 95.7 0.023 7.9E-07 51.8 7.6 111 25-148 33-150 (200)
43 3ab4_A Aspartokinase; aspartat 95.7 0.21 7.2E-06 50.5 15.6 109 26-147 263-378 (421)
44 1y7p_A Hypothetical protein AF 95.6 0.016 5.5E-07 53.1 5.9 49 116-164 4-57 (223)
45 1y7p_A Hypothetical protein AF 95.5 0.018 6.2E-07 52.8 5.9 48 326-373 5-57 (223)
46 4go7_X Aspartokinase; transfer 95.0 0.036 1.2E-06 50.5 6.4 108 244-357 32-150 (200)
47 3c1m_A Probable aspartokinase; 94.6 0.11 3.9E-06 53.4 9.7 107 26-146 317-437 (473)
48 1sc6_A PGDH, D-3-phosphoglycer 92.6 0.24 8.2E-06 49.9 7.7 47 326-372 332-378 (404)
49 3tvi_A Aspartokinase; structur 92.1 0.7 2.4E-05 47.1 10.5 108 26-149 297-410 (446)
50 3c1m_A Probable aspartokinase; 92.0 0.88 3E-05 46.7 11.3 100 245-355 316-437 (473)
51 1ygy_A PGDH, D-3-phosphoglycer 91.9 0.53 1.8E-05 49.1 9.6 62 324-389 453-516 (529)
52 1ygy_A PGDH, D-3-phosphoglycer 91.0 0.79 2.7E-05 47.7 9.7 63 113-181 451-515 (529)
53 2qmx_A Prephenate dehydratase; 90.6 0.47 1.6E-05 45.4 7.0 67 325-393 200-267 (283)
54 3luy_A Probable chorismate mut 89.3 1.6 5.5E-05 42.6 9.7 47 334-381 217-264 (329)
55 2cdq_A Aspartokinase; aspartat 89.0 3.5 0.00012 42.6 12.6 109 26-148 340-454 (510)
56 3mah_A Aspartokinase; aspartat 89.0 0.82 2.8E-05 39.4 6.7 99 26-148 17-121 (157)
57 1sc6_A PGDH, D-3-phosphoglycer 88.9 0.92 3.1E-05 45.6 7.9 50 115-164 330-379 (404)
58 3mwb_A Prephenate dehydratase; 88.7 0.74 2.5E-05 44.6 6.8 92 270-380 163-257 (313)
59 3tvi_A Aspartokinase; structur 88.1 5.5 0.00019 40.5 13.1 103 246-357 297-409 (446)
60 2qmw_A PDT, prephenate dehydra 88.1 1.3 4.3E-05 42.0 7.8 98 271-393 154-255 (267)
61 3k5p_A D-3-phosphoglycerate de 87.2 0.96 3.3E-05 45.7 6.8 46 26-71 342-387 (416)
62 2qmx_A Prephenate dehydratase; 87.0 1.6 5.4E-05 41.7 7.8 54 115-170 199-253 (283)
63 3k5p_A D-3-phosphoglycerate de 85.3 5.1 0.00017 40.3 10.9 50 114-163 341-390 (416)
64 3mtj_A Homoserine dehydrogenas 83.9 2.3 7.8E-05 43.3 7.7 34 325-358 359-392 (444)
65 3luy_A Probable chorismate mut 83.7 6.6 0.00023 38.2 10.7 53 116-170 206-261 (329)
66 3mwb_A Prephenate dehydratase; 83.1 3.2 0.00011 40.1 8.0 54 115-170 200-255 (313)
67 3mtj_A Homoserine dehydrogenas 79.0 3.4 0.00011 42.0 6.9 51 114-164 357-409 (444)
68 2qmw_A PDT, prephenate dehydra 76.7 8.9 0.0003 36.1 8.6 50 115-164 185-238 (267)
69 2cdq_A Aspartokinase; aspartat 73.0 6.1 0.00021 40.8 7.0 134 246-396 340-483 (510)
70 1phz_A Protein (phenylalanine 64.3 7 0.00024 39.3 5.1 66 325-393 34-100 (429)
71 1phz_A Protein (phenylalanine 54.6 17 0.00059 36.5 5.9 51 114-164 32-83 (429)
72 3g12_A Putative lactoylglutath 44.5 54 0.0018 26.0 6.7 49 26-81 66-115 (128)
73 1ib8_A Conserved protein SP14. 44.2 1E+02 0.0034 26.5 8.6 92 262-360 16-111 (164)
74 1rwu_A Hypothetical UPF0250 pr 43.5 1E+02 0.0035 24.7 7.9 66 25-97 34-102 (109)
75 3ced_A Methionine import ATP-b 41.5 1.2E+02 0.0041 23.4 8.0 56 337-396 35-90 (98)
76 2j0w_A Lysine-sensitive aspart 40.1 13 0.00046 37.6 2.6 106 26-147 307-418 (449)
77 1zhv_A Hypothetical protein AT 32.5 33 0.0011 28.7 3.4 53 334-399 74-126 (134)
78 3dhx_A Methionine import ATP-b 30.8 99 0.0034 24.3 5.9 54 338-396 37-90 (106)
79 3mah_A Aspartokinase; aspartat 27.5 35 0.0012 28.8 2.8 35 114-148 16-53 (157)
80 2qsw_A Methionine import ATP-b 26.3 1.9E+02 0.0066 22.1 6.9 56 336-396 37-92 (100)
81 3r6a_A Uncharacterized protein 26.3 1.5E+02 0.005 24.0 6.5 47 327-380 68-114 (144)
82 1zvp_A Hypothetical protein VC 25.6 74 0.0025 26.4 4.4 46 114-164 69-117 (133)
83 3r6a_A Uncharacterized protein 25.1 1.5E+02 0.0052 23.9 6.4 47 28-81 67-113 (144)
84 1zhv_A Hypothetical protein AT 24.5 49 0.0017 27.6 3.1 45 115-164 61-108 (134)
85 1zvp_A Hypothetical protein VC 23.4 44 0.0015 27.9 2.6 28 332-361 81-108 (133)
86 3g12_A Putative lactoylglutath 23.3 2.6E+02 0.009 21.7 7.7 49 245-300 65-114 (128)
87 2qrr_A Methionine import ATP-b 21.0 2E+02 0.0069 22.0 6.0 65 327-396 25-92 (101)
88 3kol_A Oxidoreductase, glyoxal 20.8 1.3E+02 0.0045 23.8 5.1 38 339-379 109-146 (156)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=1.8e-17 Score=152.88 Aligned_cols=157 Identities=16% Similarity=0.165 Sum_probs=116.0
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccC---ccc
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNAS---FLN 102 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~---~~~ 102 (437)
..++|+|+|+|||||+++++++|+++|+||++|++++.+|.+.-.|.|..+.. .....++.|+++|..... ...
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 45799999999999999999999999999999999976554433788864421 222467788888876431 110
Q ss_pred CcceeeeecCCCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecC--ceeEEEEEEEeCCCCCcCCCHHHHHHH
Q 013722 103 SMRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHN--ARAAALLHVKDQSSGCAIEDQKRLLKI 180 (437)
Q Consensus 103 ~~~r~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~--~~~~d~F~V~~~~~g~~~~~~~~~~~l 180 (437)
.....-. ......++|+|.|+||||++++|+++|+++|+||.+++..|.+ ++..+.|+++.. .+.+ ++.. +.|
T Consensus 81 ~~~~~~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~l 155 (195)
T 2nyi_A 81 SVAERHV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QEV 155 (195)
T ss_dssp CC----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HHH
T ss_pred EEEeCCc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HHH
Confidence 0100001 3344678999999999999999999999999999999999976 667889988773 3333 2445 788
Q ss_pred HHHHhhhhcc
Q 013722 181 KKLLCNVLRT 190 (437)
Q Consensus 181 ~~~L~~aL~g 190 (437)
+++|......
T Consensus 156 ~~~l~~~a~~ 165 (195)
T 2nyi_A 156 VTALSRVEEE 165 (195)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888865543
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=4.3e-18 Score=157.08 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=111.3
Q ss_pred CeeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEecC-CeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh----
Q 013722 246 DYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGR-MEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER---- 320 (437)
Q Consensus 246 ~~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~-g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~---- 320 (437)
..++|+|+||||||||++++++|+++|+||.++++++.. ++++ .|.+..+.. ....+++.|++.|.+.+.+
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK---DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS---SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc---cchhHHHHHHHHHHHHHHhcCCe
Confidence 357899999999999999999999999999999999865 5777 777765432 2233567777777654321
Q ss_pred -cc--------CCCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecC--CeEEEEEEEEcCCCCCCChHHHHHHHH
Q 013722 321 -RA--------SEGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMG--RKVKDTFFVTDASGNPVDPKIVDSIQH 389 (437)
Q Consensus 321 -~~--------~~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g--~~a~D~F~v~d~~g~~l~~~~~~~l~~ 389 (437)
++ ...++|+|.++||||++++|+++|+++|+||..++..|.+ +++.|.|+++...+.+ .+.. ++|++
T Consensus 80 ~~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~ 157 (195)
T 2nyi_A 80 SSVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVT 157 (195)
T ss_dssp CCC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHH
T ss_pred EEEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHH
Confidence 01 1258999999999999999999999999999999999998 8889999997654433 2234 67777
Q ss_pred HHhh
Q 013722 390 QIGR 393 (437)
Q Consensus 390 ~L~~ 393 (437)
+|..
T Consensus 158 ~l~~ 161 (195)
T 2nyi_A 158 ALSR 161 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.67 E-value=8.3e-16 Score=141.19 Aligned_cols=138 Identities=15% Similarity=0.174 Sum_probs=105.6
Q ss_pred eeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEecCC-eEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh-----
Q 013722 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRM-EAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER----- 320 (437)
Q Consensus 247 ~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g-~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~----- 320 (437)
...|+|+|+||||++++++++|++.|+||.++++++..| +.+ .|.|..+. ...+.|++.|.+...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISGSP-------SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEECH-------HHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEecCC-------CCHHHHHHHHHHHHHhcCCEE
Confidence 468999999999999999999999999999999998765 555 77776532 3677888888765421
Q ss_pred ---ccC--------CCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCC----eEEEEEEEEcCCCCCCChHHHH
Q 013722 321 ---RAS--------EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGR----KVKDTFFVTDASGNPVDPKIVD 385 (437)
Q Consensus 321 ---~~~--------~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~----~a~D~F~v~d~~g~~l~~~~~~ 385 (437)
+.+ ..++|+|.++||||++++|+++|+++|+||..++..|.++ +..+.|+++..-+.+ .+...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~ 156 (192)
T 1u8s_A 78 MMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLM 156 (192)
T ss_dssp EEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHH
T ss_pred EEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHH
Confidence 111 2479999999999999999999999999999999999984 689999997643322 122445
Q ss_pred HHHHHHhh
Q 013722 386 SIQHQIGR 393 (437)
Q Consensus 386 ~l~~~L~~ 393 (437)
+|+++|.+
T Consensus 157 ~l~~~l~~ 164 (192)
T 1u8s_A 157 QLQEEFDA 164 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.67 E-value=1.6e-15 Score=139.32 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=110.7
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhcc---Cccc
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA---SFLN 102 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~---~~~~ 102 (437)
...+|+|+|+||||++++++++|+++|+||.++++++.+|.+.-.|.|..+. ...+.|++.|.... ....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEE
Confidence 3578999999999999999999999999999999998777666588885431 24566666665432 1110
Q ss_pred Cccee--eeecCCCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCc----eeEEEEEEEeCCCCCcCCCHHH
Q 013722 103 SMRSS--VGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA----RAAALLHVKDQSSGCAIEDQKR 176 (437)
Q Consensus 103 ~~~r~--v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~----~~~d~F~V~~~~~g~~~~~~~~ 176 (437)
...+. -........++|+|.++||||++++|+++|+++|+||.+++..|.+. +..+.|+++.. .+.+ ++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~~~~ 154 (192)
T 1u8s_A 78 MMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--SGCN 154 (192)
T ss_dssp EEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--TTSC
T ss_pred EEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--CCCC
Confidence 00000 00133446789999999999999999999999999999999999764 57888988762 3322 2334
Q ss_pred HHHHHHHHhhhhcc
Q 013722 177 LLKIKKLLCNVLRT 190 (437)
Q Consensus 177 ~~~l~~~L~~aL~g 190 (437)
.+.|+++|.+....
T Consensus 155 ~~~l~~~l~~~~~~ 168 (192)
T 1u8s_A 155 LMQLQEEFDALCTA 168 (192)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 57788888865544
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.80 E-value=1.1e-07 Score=96.77 Aligned_cols=151 Identities=13% Similarity=0.049 Sum_probs=101.9
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhcc---Cccc
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNA---SFLN 102 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~---~~~~ 102 (437)
....|+|.|+||||+.+.++++|+++|+||.+.+.++.+|++.-...+.-+.+. ...+.|+++|.... ....
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCeEE
Confidence 467999999999999999999999999999999999988877554445322111 01245666554431 1100
Q ss_pred Cc---ceeeeecCCCceEEEEEEeCC-CcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHHH
Q 013722 103 SM---RSSVGVVPSKEYTSIELTGTD-RPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178 (437)
Q Consensus 103 ~~---~r~v~~~~~~~~t~i~v~~~D-rpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~~ 178 (437)
.. .... ......+..+++.+.| +||++.+|+.+++.+|+||...+..+......-.|.|..+ +. + ..
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~----~~-~---~~ 156 (415)
T 3p96_A 86 SIERSDDVP-IIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP----PG-A---DE 156 (415)
T ss_dssp EEEECSSSC-SSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC----TT-C---HH
T ss_pred EEEECCccc-ccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC----CC-C---HH
Confidence 00 0000 0133468899999999 9999999999999999999998877743334444666542 11 2 35
Q ss_pred HHHHHHhhhhcc
Q 013722 179 KIKKLLCNVLRT 190 (437)
Q Consensus 179 ~l~~~L~~aL~g 190 (437)
.+++.+.+.+..
T Consensus 157 ~l~~~l~~l~~~ 168 (415)
T 3p96_A 157 ALRTALNRVSSE 168 (415)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 566666655543
No 6
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.61 E-value=1.6e-06 Score=75.15 Aligned_cols=129 Identities=8% Similarity=0.004 Sum_probs=84.1
Q ss_pred eEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhhccCCCcE
Q 013722 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLE 327 (437)
Q Consensus 248 t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~ 327 (437)
-+++|..+|+||.++++++.|++.|+||....+....++..-.|.+.+ .++.++.|++. .-......+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~d-----------~~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSD-----------PDKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESC-----------HHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeCC-----------HHHHHHHHHHc-CCeEeeeeE
Confidence 368889999999999999999999999998877644333333444211 12233334331 001111246
Q ss_pred EEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhccccc
Q 013722 328 LELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQV 398 (437)
Q Consensus 328 iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~~~ 398 (437)
+-+..+|+||.+++|+++|+++||||.+......+.++.=.|.+. ..++..+.|+++-+.|
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~----------d~~~A~~~L~~~g~~v 135 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPS----------NMDKCIEVLKEKKVDL 135 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEES----------CHHHHHHHHHHTTCEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeC----------CHHHHHHHHHHcCCEE
Confidence 777889999999999999999999998766642344555445441 2344455666654444
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.59 E-value=1.5e-06 Score=75.32 Aligned_cols=113 Identities=18% Similarity=0.216 Sum_probs=76.4
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcccCcce
Q 013722 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSMRS 106 (437)
Q Consensus 27 ~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~~r 106 (437)
..+|+|..+|+||.++++++.|++.|+||..-.+....+..+-.|.+. +. +..++.|... .+. .
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~--------d~---~~a~~~L~~~-G~~----v 69 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS--------DP---DKAYKALKDN-HFA----V 69 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES--------CH---HHHHHHHHHT-TCC----E
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC--------CH---HHHHHHHHHc-CCe----E
Confidence 468999999999999999999999999999877753222222224321 11 2334444432 110 0
Q ss_pred eeeecCCCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEE
Q 013722 107 SVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHV 162 (437)
Q Consensus 107 ~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V 162 (437)
....++.+..+|+||.+++|+++|+++|+||.....+..+++..-+|.+
T Consensus 70 -------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 70 -------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp -------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred -------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 0124677788999999999999999999999887766333444444433
No 8
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.55 E-value=2.6e-06 Score=86.63 Aligned_cols=122 Identities=11% Similarity=0.008 Sum_probs=85.2
Q ss_pred CeeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHH---Hh---
Q 013722 246 DYTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAA---IE--- 319 (437)
Q Consensus 246 ~~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~---l~--- 319 (437)
....|+|.||||||+.+.+++.|+++|+||.+.+.++.+|+-.-...+.-+++. . ..+.|++.|... +.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~----~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-A----DGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-H----TSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-C----CHHHHHHHHHHHHHHcCeEE
Confidence 356899999999999999999999999999999998876622112222222110 0 125566666543 21
Q ss_pred --h------ccC--CCcEEEEEeCC-CcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEE
Q 013722 320 --R------RAS--EGLELELYTDD-RFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372 (437)
Q Consensus 320 --~------~~~--~~~~iev~~~D-rpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~ 372 (437)
+ +.+ .+..+++.+.| +||++.+|+.+|+++|+||...+.-+-.....=.|+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~ 149 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVS 149 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEee
Confidence 0 111 25799999999 99999999999999999998887766323332236664
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.21 E-value=6.5e-06 Score=65.31 Aligned_cols=67 Identities=12% Similarity=0.173 Sum_probs=53.0
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHhhhh
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVL 188 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~~aL 188 (437)
..+.|+|.++||||+|++|+++|+++|+||.+....+.++.+.-.+.+.-+ + ...++.|.+.|.+..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-----~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-----KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-----CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-----CCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998876776666777553 2 123577777777544
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.11 E-value=2.3e-05 Score=62.01 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=44.2
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeC
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDI 76 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~ 76 (437)
....|+|.++||||++++++++|+++|+||.+....+.+|.+.-.+.+.-+
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~ 54 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD 54 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC
Confidence 457899999999999999999999999999999998877877766766433
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.98 E-value=4.3e-05 Score=59.78 Aligned_cols=64 Identities=13% Similarity=0.270 Sum_probs=49.5
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHh
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLC 185 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~ 185 (437)
..+.|.|.+.||||+|++|+++|+++|+||.+..+.+.++.+...|.+..+ +...++.+.+.|.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHHh
Confidence 356789999999999999999999999999999998865555556655542 3555566665554
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.93 E-value=4.1e-05 Score=59.92 Aligned_cols=63 Identities=10% Similarity=0.265 Sum_probs=51.1
Q ss_pred cEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 326 ~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
+.|.|.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+.-. +.+..+++.++|.+
T Consensus 6 ~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 6 AGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999998876666666666421 23566777777776
No 13
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.86 E-value=0.0036 Score=66.55 Aligned_cols=268 Identities=13% Similarity=0.122 Sum_probs=154.3
Q ss_pred CeEEEEEE-eCCCccHHHHHHHHHHhCCceEEEEEEEE-eCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCc--c
Q 013722 26 HATVIQVD-SVNRHGILLEVIQFLVDLNLVITKAYISS-DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF--L 101 (437)
Q Consensus 26 ~~~~I~V~-~~DrpGLla~i~~~L~~~glnI~~A~I~t-~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~--~ 101 (437)
+.+.|++. .++.||.++++...|+++|++|.--..+. .+|..--.|.|... . -.....+.+.+...... +
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~--~----~~~a~~~l~~~~~el~~~~~ 342 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKD--L----LNTAEAVTSAIAPALRSYPE 342 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGG--G----HHHHHHHHHHHGGGGSSSTT
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHH--H----HHHHHHHHHHHHHHhhcccc
Confidence 34455554 57899999999999999999995333222 45555555777321 1 01112222223222200 0
Q ss_pred cCcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHHH
Q 013722 102 NSMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLL 178 (437)
Q Consensus 102 ~~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~~ 178 (437)
.....++. ...+...|+|++. .+||+.+++..+|++.|+||.... |. ...-.|.|... ..+
T Consensus 343 ~~~~~~v~--~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~~----------d~~ 406 (600)
T 3l76_A 343 ADQEAEII--VEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQR----------DAD 406 (600)
T ss_dssp CSSSSEEE--EECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGG----------GHH
T ss_pred ccCcceeE--ecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcHH----------HHH
Confidence 00111222 2346788999985 789999999999999999997765 32 22333444431 123
Q ss_pred HHHHHHhhhhccCCCCCCCCcccccccccccchhhhhhhhcccccccccccCCCCCcEE-EEEecCCCCeeEEEEE-eCC
Q 013722 179 KIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHV-TILDCSDRDYTAVTIR-SKD 256 (437)
Q Consensus 179 ~l~~~L~~aL~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~V-~v~~~~~~~~t~V~V~-~~D 256 (437)
+.-+.|++.+....... . + .... ...+.| -+.. +.+.+.|+|. .+|
T Consensus 407 ~Av~aLh~~f~~~~t~~-----~--------~----------~~~~-------~~~~~v~Gia~--~~~~a~i~i~~~~~ 454 (600)
T 3l76_A 407 RAIAALSNAFGVTLSPP-----K--------N----------QTDT-------SHLPAVRGVAL--DQDQAQIAIRHVPD 454 (600)
T ss_dssp HHHHHHHHHTTCCBCCC-----C--------C----------CCC----------CCSCCEEEE--ECSEEEEEEEEEES
T ss_pred HHHHHHHHhhcccCCCc-----c--------c----------cccc-------cccCceEEEEe--eCCEEEEEEecCCC
Confidence 34445555554321100 0 0 0000 001111 1221 2345566653 699
Q ss_pred CCchHHHHHHHHHhCCCeEEEEEEEec----CC--eEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhhccC-------
Q 013722 257 RPKLLFDTVCCLTDMQYVVYHGTVVTG----RM--EAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRAS------- 323 (437)
Q Consensus 257 rpgL~~~v~~~L~~~~lnI~~a~i~t~----~g--~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~~~~------- 323 (437)
+||..+++...|++.|+||---..... .| ..--+|.|... ..++..+.|++ +...+.
T Consensus 455 ~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~---------d~~~a~~~l~~-~~~~~~~~~v~~~ 524 (600)
T 3l76_A 455 RPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEG---------DSSQAEAILQP-LIKDWLDAAIVVN 524 (600)
T ss_dssp STTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHH---------HHHHHHHHHHH-HTTTSTTCEEEEE
T ss_pred CccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHH---------HHHHHHHHHHH-HHHhcCCceEEEe
Confidence 999999999999999999954433321 14 33445666543 33344444444 222221
Q ss_pred -CCcEEEEEe---CCCcchHHHHHHHHHHcCCeEEEEE
Q 013722 324 -EGLELELYT---DDRFGLLSDITRILREYGLCIRRAE 357 (437)
Q Consensus 324 -~~~~iev~~---~DrpGLL~~I~~~l~~~~i~I~~A~ 357 (437)
.-.+|.|.+ ..+||+.+++-++|++.||||..-.
T Consensus 525 ~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 525 KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 235788876 6899999999999999999998755
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.64 E-value=0.0011 Score=63.94 Aligned_cols=118 Identities=15% Similarity=0.126 Sum_probs=71.5
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEE--eCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcccC
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS--DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNS 103 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~ 103 (437)
....++|.|+||||+.+.++++|+++|+||.+.+.++ ..|++.-...+.-+.+. . ..+.|+++|..... ...
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~----~~~~L~~~f~~la~-~~~ 78 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-I----PLASLRTGFGVIAA-KFT 78 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-C----CHHHHHHHHHHHHH-HTT
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-C----CHHHHHHHHHHHHH-HcC
Confidence 3478999999999999999999999999999999985 45766544444333321 1 13456666654321 001
Q ss_pred cceeeeecCCCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEe
Q 013722 104 MRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151 (437)
Q Consensus 104 ~~r~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T 151 (437)
+.-++.... ....|-|-...+---|..|-.....-.+++.=+-+.+
T Consensus 79 m~~~l~~~~--~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 79 MGWHMRDRE--TRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp CEEEEEETT--SCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CEEEeeccC--CCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 111222221 2334445445555577777777776666654444444
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.61 E-value=0.00061 Score=66.28 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=48.3
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEe--CCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhh
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSD--GGYLMDVFYVTDINGQKIGDQATISYIKTTVET 96 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~--~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~ 96 (437)
....++|.|+||||+.+.++++|+++|+||.+++.+++ .|+++-...+..+.+ .. ..+.|+++|..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PF----DLDGFREAFTP 88 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SS----CHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CC----CHHHHHHHHHH
Confidence 45789999999999999999999999999999999975 577654444432222 11 23456666644
No 16
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.49 E-value=0.0021 Score=56.89 Aligned_cols=114 Identities=17% Similarity=0.216 Sum_probs=77.5
Q ss_pred CCeeEEEEE-eCCCCchHHHHHHHHHhCCCeEEEEEEEec-CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhhcc
Q 013722 245 RDYTAVTIR-SKDRPKLLFDTVCCLTDMQYVVYHGTVVTG-RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRA 322 (437)
Q Consensus 245 ~~~t~V~V~-~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~-~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~~~ 322 (437)
.+.+.|+|. .+|+||.++++...|++.|+||..-..... +|..--+|+|...+. ++..+.|++. ...+
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~---------~~a~~~l~~~-~~~l 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY---------KQTLEILSER-QDSI 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH---------HHHHHHHHHS-STTT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH---------HHHHHHHHHH-HHHc
Confidence 456778888 599999999999999999999998765432 343345677765322 2233344432 1111
Q ss_pred --------CCCcEEEEEeCC---CcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEE
Q 013722 323 --------SEGLELELYTDD---RFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372 (437)
Q Consensus 323 --------~~~~~iev~~~D---rpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~ 372 (437)
..-.++.|.+.+ +||+++++.++|+++||||.. |+|-... =.|.|.
T Consensus 93 ~~~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~--istse~~--is~vv~ 149 (167)
T 2re1_A 93 GAASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM--ISTSEIK--VSVLID 149 (167)
T ss_dssp TCSEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE--EEECSSE--EEEEEE
T ss_pred CCceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE--EEcccCE--EEEEEe
Confidence 123679999987 999999999999999999998 4453222 246563
No 17
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.49 E-value=0.002 Score=62.16 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=47.5
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEE--eCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhh
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS--DGGYLMDVFYVTDINGQKIGDQATISYIKTTVET 96 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~ 96 (437)
....++|.|+||||+.+++++.|+++|+||.+.+.++ ..|++.-...+..+. . . ..+.|+++|..
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~-~----~~~~L~~~f~~ 73 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-D-F----DEAGFRAGLAE 73 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-S-C----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-C-C----CHHHHHHHHHH
Confidence 3578999999999999999999999999999999986 456664344442222 1 1 23556666654
No 18
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.47 E-value=0.0023 Score=56.60 Aligned_cols=111 Identities=11% Similarity=0.142 Sum_probs=74.2
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHhCCceEEEEEEE-EeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCccc
Q 013722 25 EHATVIQVD-SVNRHGILLEVIQFLVDLNLVITKAYIS-SDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLN 102 (437)
Q Consensus 25 ~~~~~I~V~-~~DrpGLla~i~~~L~~~glnI~~A~I~-t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 102 (437)
.+...|+|. .+|+||.++++...|+++|+||..-... +.+|...-.|.|...+ . +..++.|.+.... .
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~------~---~~a~~~l~~~~~~-l 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGD------Y---KQTLEILSERQDS-I 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGG------H---HHHHHHHHHSSTT-T
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechH------H---HHHHHHHHHHHHH-c
Confidence 357888888 5999999999999999999999866553 2345444457773211 1 2223334332110 0
Q ss_pred CcceeeeecCCCceEEEEEEeCC---CcchHHHHHHHHHhCCCeEEEEE
Q 013722 103 SMRSSVGVVPSKEYTSIELTGTD---RPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 103 ~~~r~v~~~~~~~~t~i~v~~~D---rpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
.. ..+. ...+...++|.+.+ +||+++++..+|+++|+||....
T Consensus 93 ~~-~~i~--~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 93 GA-ASID--GDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp TC-SEEE--EESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred CC-ceEE--ecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 00 1122 23367899999987 99999999999999999998843
No 19
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.43 E-value=0.0021 Score=61.99 Aligned_cols=116 Identities=12% Similarity=0.049 Sum_probs=68.1
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEE--eCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcccC
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS--DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNS 103 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~ 103 (437)
....+++.|+||||+.+.+++.|+++|+||.+.+.++ ..|++.-...+ +..+.. .+.|+++|..... ...
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~-~~~~~~------~~~L~~~f~~la~-~~~ 77 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSV-EIPVAG------VNDFNSAFGKVVE-KYN 77 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE-ECCC---------CHHHHHHHHHHG-GGT
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEE-EcCCCC------HHHHHHHHHHHHH-HcC
Confidence 4679999999999999999999999999999999985 45666533333 222211 2356666544321 011
Q ss_pred cceeeeecCCCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEe
Q 013722 104 MRSSVGVVPSKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151 (437)
Q Consensus 104 ~~r~v~~~~~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T 151 (437)
+.-++....... .|-|.+..+---|..|-.....-.+++.=+-+.+
T Consensus 78 m~~~l~~~~~~~--ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 78 AEWWFRPRTDRK--KVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp CEEEEEETTCCC--EEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred CeeEeeccCCCc--EEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEe
Confidence 122222222222 3334344444567777777766656544334444
No 20
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.35 E-value=0.0025 Score=61.72 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=40.2
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEE--eCCEEEEEEEE
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISS--DGGYLMDVFYV 73 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t--~~g~~~d~F~V 73 (437)
....+++.|+||||+.++++++|+++|+||.+.+.++ ..|++.-...+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 58 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVF 58 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEE
Confidence 4578999999999999999999999999999999986 45666433333
No 21
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.30 E-value=0.0088 Score=53.43 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCeEEEEE-EeCCCccHHHHHHHHHHhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCc
Q 013722 25 EHATVIQV-DSVNRHGILLEVIQFLVDLNLVITKAYISSD---GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF 100 (437)
Q Consensus 25 ~~~~~I~V-~~~DrpGLla~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 100 (437)
.+.+.|+| ..+|+||.++++...|++.|+||..-..++. ++..--.|.+... ..+..++.|.+....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHHHh
Confidence 36788888 4799999999999999999999986555433 3332223666321 123334445442110
Q ss_pred ccCcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEE
Q 013722 101 LNSMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 101 ~~~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
... ..+.. ..+...|+|.|. ++||+++++..+|++.|+||....
T Consensus 84 -~~~-~~v~~--~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 84 -GNW-TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp -TTC-SEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -cCC-CeEEE--eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 000 12222 236778888886 899999999999999999998843
No 22
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.20 E-value=0.0025 Score=57.04 Aligned_cols=114 Identities=15% Similarity=0.180 Sum_probs=76.6
Q ss_pred CCeeEEEE-EeCCCCchHHHHHHHHHhCCCeEEEEEEEec---CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh
Q 013722 245 RDYTAVTI-RSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG---RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER 320 (437)
Q Consensus 245 ~~~t~V~V-~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~---~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~ 320 (437)
.+.+.|+| ..+|+||.++++...|++.|+||..-...+. ++..-..|.+... ..++..+.|++ +..
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~-~~~ 82 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKK-LQV 82 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHT-TTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHH-HHH
Confidence 45667777 4799999999999999999999998766543 3333334666552 22333344443 211
Q ss_pred cc--------CCCcEEEEEeC---CCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEE
Q 013722 321 RA--------SEGLELELYTD---DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372 (437)
Q Consensus 321 ~~--------~~~~~iev~~~---DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~ 372 (437)
.. +.-.+|.|.+. ++||+++++.++|++.||||.. |+|-. ..-.|.|.
T Consensus 83 ~~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istSe--~~Is~vV~ 141 (178)
T 2dtj_A 83 QGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTSE--IRISVLIR 141 (178)
T ss_dssp TTTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEET--TEEEEEEE
T ss_pred hcCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcCC--CeEEEEEe
Confidence 11 12356777775 8999999999999999999998 44432 22356663
No 23
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.05 E-value=0.0018 Score=57.27 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=50.5
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEe-cC-ceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHhhh
Q 013722 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-HN-ARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNV 187 (437)
Q Consensus 116 ~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T-~~-~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~~a 187 (437)
...|+|.+.|+||+|++|+++|+++|+||.+..+.+ .+ +...-+|.|.. ++..++++.+.|.+.
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999975 32 45555666653 356778888877743
No 24
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.01 E-value=0.002 Score=62.22 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=34.8
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEe
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT 151 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T 151 (437)
..++|++.|+||||+++.|+++|+++|+||.++..++
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 42 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN 42 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee
Confidence 4679999999999999999999999999999999875
No 25
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.99 E-value=0.002 Score=56.96 Aligned_cols=62 Identities=18% Similarity=0.307 Sum_probs=50.6
Q ss_pred cEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecC--CeEEEEEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMG--RKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 326 ~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g--~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
+.|+|...||||+|++|+.+|++.|+||.+..+.+.. +.+.-+|.|.. ++...++|.++|.+
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES------CHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec------cHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999887542 55666777742 14677889998888
No 26
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.97 E-value=0.016 Score=55.87 Aligned_cols=104 Identities=11% Similarity=-0.020 Sum_probs=63.8
Q ss_pred eeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHh-----
Q 013722 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG--RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE----- 319 (437)
Q Consensus 247 ~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~--~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~----- 319 (437)
...++|.||||||+.+++++.|+++|+||.+.+.++. .|+-.-...+..+++ . ..+.|++.|.+.-+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~--~----~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDD--F----DEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSS--C----CHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCC--C----CHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999999863 353222333333332 2 24566666654311
Q ss_pred ---hccCCCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEE
Q 013722 320 ---RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRA 356 (437)
Q Consensus 320 ---~~~~~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A 356 (437)
+...++..|-|-+-.+---|.+|-.....-.++.+-+
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~ 121 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVV 121 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEE
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEE
Confidence 1112233444444444446666666666555544333
No 27
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.94 E-value=0.022 Score=54.91 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=69.0
Q ss_pred eeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHH---Hh--
Q 013722 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG--RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAA---IE-- 319 (437)
Q Consensus 247 ~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~--~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~---l~-- 319 (437)
...+++.|+||||+.+++++.|+++|+||.+.+.++. .|+-.-...+.-+++ .. ..+.|++.|+.. +.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VI----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CC----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CC----CHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999999863 353222233333332 12 245566666542 11
Q ss_pred ---hccCCCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEe
Q 013722 320 ---RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358 (437)
Q Consensus 320 ---~~~~~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I 358 (437)
+...++..|-|-.-.+---|.+|-.....-.++++-+-+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~V 122 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAI 122 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEE
Confidence 112334556666666656778888887776676544433
No 28
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.93 E-value=0.0024 Score=56.47 Aligned_cols=109 Identities=11% Similarity=0.118 Sum_probs=72.9
Q ss_pred CCeEEEEEEe-CCCccHHHHHHHHHHhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCc
Q 013722 25 EHATVIQVDS-VNRHGILLEVIQFLVDLNLVITKAYISSD---GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF 100 (437)
Q Consensus 25 ~~~~~I~V~~-~DrpGLla~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 100 (437)
.+...|+|.+ +|+||.++++...|++.|+||..-..... .|..--+|.|...+. +...+.|++ +.....+
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~-~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEP-VLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHH-HHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHH-HHHHhCC
Confidence 4677888876 89999999999999999999986444321 344444577743211 122233333 2221211
Q ss_pred ccCcceeeeecCCCceEEEEEEeCC---CcchHHHHHHHHHhCCCeEEEE
Q 013722 101 LNSMRSSVGVVPSKEYTSIELTGTD---RPGLLSEVSAVLTDLSCSVVSA 147 (437)
Q Consensus 101 ~~~~~r~v~~~~~~~~t~i~v~~~D---rpGLL~~I~~~l~~~g~~I~~A 147 (437)
.+.. ..+...++|+|.+ +||+++++..+|++.|+||...
T Consensus 88 ------~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 ------EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp ------EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred ------cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 2221 2367789999976 9999999999999999999544
No 29
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.91 E-value=0.0031 Score=55.74 Aligned_cols=118 Identities=10% Similarity=0.036 Sum_probs=75.5
Q ss_pred CCeeEEEEEe-CCCCchHHHHHHHHHhCCCeEEEEEEEec---CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh
Q 013722 245 RDYTAVTIRS-KDRPKLLFDTVCCLTDMQYVVYHGTVVTG---RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER 320 (437)
Q Consensus 245 ~~~t~V~V~~-~DrpgL~~~v~~~L~~~~lnI~~a~i~t~---~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~ 320 (437)
.+.+.|+|.+ +|+||..+++...|++.|+||..-..... .|..--+|.|...+.. ...++.+.+.+.+.-
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~------~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQ------EALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHH------HHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHH------HHHHHHHHHHHHhCC
Confidence 4566677765 89999999999999999999987654332 2334456777663321 111222222222221
Q ss_pred c--c-CCCcEEEEEeCC---CcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEE
Q 013722 321 R--A-SEGLELELYTDD---RFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372 (437)
Q Consensus 321 ~--~-~~~~~iev~~~D---rpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~ 372 (437)
. . +.-.++.|.+.+ +||+++++.++|++.||||..- +|- +. .=.|.|.
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~S-e~-~is~vv~ 141 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI--ATS-EV-RISVIIP 141 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE--EEC-SS-EEEEEEE
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE--Ecc-CC-EEEEEEe
Confidence 1 1 123568888877 9999999999999999999554 333 22 3346664
No 30
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.90 E-value=0.0029 Score=55.98 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=50.9
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEe-c-CceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHhhh
Q 013722 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWT-H-NARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNV 187 (437)
Q Consensus 116 ~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T-~-~~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~~a 187 (437)
...++|...|+||+|++|+++|+++|+||.+..+.+ . .+...-+|.|.. ++..++++.+.|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999875 3 355666666664 356677788777744
No 31
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.88 E-value=0.022 Score=55.29 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=64.1
Q ss_pred eEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHH---Hh---
Q 013722 248 TAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG--RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAA---IE--- 319 (437)
Q Consensus 248 t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~--~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~---l~--- 319 (437)
..++|.||||||+.+++++.|++.|+||.+.+.++. .|+-.-...+..+++ .. ..+.|++.|.+. +.
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~----~~~~L~~~l~~la~~l~m~~ 97 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PF----DLDGFREAFTPIAEEFSMDW 97 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SS----CHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CC----CHHHHHHHHHHHHHHhCCee
Confidence 578999999999999999999999999999999875 353222333333322 12 245566655432 21
Q ss_pred --hccCCCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEe
Q 013722 320 --RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358 (437)
Q Consensus 320 --~~~~~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I 358 (437)
+...++..|-|-+-.+---|.+|-.....-.++.+-+-+
T Consensus 98 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~V 138 (302)
T 3o1l_A 98 RITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACV 138 (302)
T ss_dssp EEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEE
T ss_pred eecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEE
Confidence 111223344444444444667776666665554433333
No 32
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.83 E-value=0.025 Score=54.66 Aligned_cols=108 Identities=11% Similarity=0.028 Sum_probs=64.2
Q ss_pred eeEEEEEeCCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeEEEEEEEEcc-CCCCCCcHHHHHHHHHHHHHH---Hh-
Q 013722 247 YTAVTIRSKDRPKLLFDTVCCLTDMQYVVYHGTVVTG--RMEAYQEYYIKHV-DGFPISSEAERQRVMACLEAA---IE- 319 (437)
Q Consensus 247 ~t~V~V~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~--~g~ald~F~V~~~-~g~~~~~~~~~~~l~~~L~~~---l~- 319 (437)
...+++.||||||+.+++++.|+++|+||.+.+.++. .|+-.-...+..+ .+... ..+.|++.|++. +.
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~m 85 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFRM 85 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcCc
Confidence 4679999999999999999999999999999999863 3522212222222 01011 245566666442 21
Q ss_pred ----hccCCCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEe
Q 013722 320 ----RRASEGLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358 (437)
Q Consensus 320 ----~~~~~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I 358 (437)
+...++..|-|.+-.+---|.+|-.....-.++++-+-+
T Consensus 86 ~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~V 128 (292)
T 3lou_A 86 QWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGI 128 (292)
T ss_dssp EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEE
T ss_pred EEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEE
Confidence 112233445554444444677777776665555443333
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.80 E-value=0.0036 Score=55.34 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=50.6
Q ss_pred cEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeee-c-CCeEEEEEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEIST-M-GRKVKDTFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 326 ~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T-~-g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
..|+|...|+||+|++|+.+|.++|+||.+..+.+ . .+.+.-+|.|.. ++...++|..+|.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcC
Confidence 47899999999999999999999999999988864 3 355666776742 14677889999888
No 34
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.64 E-value=0.16 Score=53.86 Aligned_cols=191 Identities=14% Similarity=0.127 Sum_probs=114.7
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcc
Q 013722 25 EHATVIQVDSV---NRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFL 101 (437)
Q Consensus 25 ~~~~~I~V~~~---DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~ 101 (437)
.+...|+|.+. ++||+.+++..+|++.|+||..-. +. +.- -.|.|...+. +..++.|.+.+......+
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~-Is~vI~~~d~-----~~Av~aLh~~f~~~~t~~ 423 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVK-VSCVIDQRDA-----DRAIAALSNAFGVTLSPP 423 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSE-EEEEEEGGGH-----HHHHHHHHHHTTCCBCCC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCE-EEEEEcHHHH-----HHHHHHHHHhhcccCCCc
Confidence 46789999976 699999999999999999997554 33 322 2355632211 234555555554321100
Q ss_pred cC-----cceeee-ecCCCceEEEEEEe-CCCcchHHHHHHHHHhCCCeEEEEEEEec----Cc--eeEEEEEEEeCCCC
Q 013722 102 NS-----MRSSVG-VVPSKEYTSIELTG-TDRPGLLSEVSAVLTDLSCSVVSAEIWTH----NA--RAAALLHVKDQSSG 168 (437)
Q Consensus 102 ~~-----~~r~v~-~~~~~~~t~i~v~~-~DrpGLL~~I~~~l~~~g~~I~~A~i~T~----~~--~~~d~F~V~~~~~g 168 (437)
.. ....|. ...+.+...|+|.. +|+||+.++|.+.|+++|+||.-...... .| ...-.|.|..
T Consensus 424 ~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---- 499 (600)
T 3l76_A 424 KNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---- 499 (600)
T ss_dssp CCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----
T ss_pred cccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----
Confidence 00 001111 13344667777764 89999999999999999999965544432 23 2333455543
Q ss_pred CcCCCHHHHHHHHHHHhhhhccCCCCCCCCcccccccccccchhhhhhhhcccccccccccCCCCCcEEEEEecCCCCee
Q 013722 169 CAIEDQKRLLKIKKLLCNVLRTNGDLRTPSMSISSARVLHGERRLHQMLFADRDFERLDCVNYNSRPHVTILDCSDRDYT 248 (437)
Q Consensus 169 ~~~~~~~~~~~l~~~L~~aL~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~V~v~~~~~~~~t 248 (437)
..++...+.|.+ +..+.. + ..|.++ .+..
T Consensus 500 ------~d~~~a~~~l~~-~~~~~~-----------------------------~-----------~~v~~~----~~~a 528 (600)
T 3l76_A 500 ------GDSSQAEAILQP-LIKDWL-----------------------------D-----------AAIVVN----KAIA 528 (600)
T ss_dssp ------HHHHHHHHHHHH-HTTTST-----------------------------T-----------CEEEEE----CCEE
T ss_pred ------HHHHHHHHHHHH-HHHhcC-----------------------------C-----------ceEEEe----CCeE
Confidence 122333333332 111111 0 012221 3455
Q ss_pred EEEEE---eCCCCchHHHHHHHHHhCCCeEEEEE
Q 013722 249 AVTIR---SKDRPKLLFDTVCCLTDMQYVVYHGT 279 (437)
Q Consensus 249 ~V~V~---~~DrpgL~~~v~~~L~~~~lnI~~a~ 279 (437)
.|.|. ++..||+-+++..+|++.|+||..-.
T Consensus 529 kVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 529 KVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp EEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred EEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 66666 47899999999999999999998654
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.56 E-value=0.0079 Score=52.84 Aligned_cols=36 Identities=33% Similarity=0.657 Sum_probs=33.8
Q ss_pred EEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecC
Q 013722 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMG 362 (437)
Q Consensus 327 ~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g 362 (437)
.|+|.+.||+|||++|+++|.++++||.++.+.+.|
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g 37 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG 37 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC
Confidence 589999999999999999999999999999997774
No 36
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.44 E-value=0.11 Score=46.85 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=85.8
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEE-EeC-CEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcccCc
Q 013722 27 ATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYIS-SDG-GYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLNSM 104 (437)
Q Consensus 27 ~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~-t~~-g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~ 104 (437)
...|+|...|+||.|++++++|+..|+||.+-.+. |.+ |..--++.|... +..+++|.+.|....+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLidV---- 97 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVEV---- 97 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTTE----
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCce----
Confidence 46899999999999999999999999999998886 544 665555666422 24678888888875431
Q ss_pred ceeee-ecC------CCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHH
Q 013722 105 RSSVG-VVP------SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRL 177 (437)
Q Consensus 105 ~r~v~-~~~------~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~ 177 (437)
.+|. ... ..+...+.|.+... -..|.++....+.+|.+..-.+ -++.++. +++++
T Consensus 98 -ikV~dl~~~~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv~~~s------~~iE~tG--------~~~ki 159 (193)
T 2fgc_A 98 -VKVTPIDPLPENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIIDVSREG------AIIEITG--------ARSKV 159 (193)
T ss_dssp -EEEEECCSSGGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEECSSE------EEEEEEE--------CHHHH
T ss_pred -EEEEEecCCCCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEEcCCE------EEEEEcC--------CHHHH
Confidence 1111 111 11344566666432 7788888888888888765332 3355665 36566
Q ss_pred HHHHHHHh
Q 013722 178 LKIKKLLC 185 (437)
Q Consensus 178 ~~l~~~L~ 185 (437)
+.+-+.|.
T Consensus 160 ~a~i~~l~ 167 (193)
T 2fgc_A 160 EAFINLLP 167 (193)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhh
Confidence 65554443
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.44 E-value=0.018 Score=51.65 Aligned_cols=110 Identities=15% Similarity=0.236 Sum_probs=71.6
Q ss_pred CeEEEEE-EeCCCccHHHHHHHHHHhCCceEEEEEEE-Ee--CCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcc
Q 013722 26 HATVIQV-DSVNRHGILLEVIQFLVDLNLVITKAYIS-SD--GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFL 101 (437)
Q Consensus 26 ~~~~I~V-~~~DrpGLla~i~~~L~~~glnI~~A~I~-t~--~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~ 101 (437)
+.+.|+| -.+|+||.++++...|++.|+||.--... +. .|..--.|.|...+.. ...+.|++ +.....+
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~-----~a~~~L~~-~~~el~~- 87 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGP-----AAVEKLDS-LRNEIGF- 87 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHH-----HHHHHHHH-THHHHCC-
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHH-----HHHHHHHH-HHHhcCc-
Confidence 4556665 37899999999999999999999754433 22 4555556877432111 11122222 2111110
Q ss_pred cCcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEE
Q 013722 102 NSMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 102 ~~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
.++.. ..+...+.|+|. ++||+.+++..+|++.|+||....
T Consensus 88 ----~~v~~--~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 ----SQLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp ----SEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ----ceEEE--eCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 11221 235778888875 899999999999999999998776
No 38
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.34 E-value=0.017 Score=52.11 Aligned_cols=68 Identities=13% Similarity=0.279 Sum_probs=51.8
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEE-ecC-ceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHhhhhcc
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIW-THN-ARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCNVLRT 190 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~-T~~-~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~~aL~g 190 (437)
....|+|...|+||.|++|+++|+..|+||.+..+. |.+ +...-++.|..+ +..+++|.++|.+....
T Consensus 28 m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KLidV 97 (193)
T 2fgc_A 28 REHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKLVEV 97 (193)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTSTTE
T ss_pred eEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCcCce
Confidence 357899999999999999999999999999998886 444 444555566542 33567888888765544
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.01 E-value=0.025 Score=50.60 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=69.9
Q ss_pred CeeEEEE-EeCCCCchHHHHHHHHHhCCCeEEEEEEEe-c--CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh-
Q 013722 246 DYTAVTI-RSKDRPKLLFDTVCCLTDMQYVVYHGTVVT-G--RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER- 320 (437)
Q Consensus 246 ~~t~V~V-~~~DrpgL~~~v~~~L~~~~lnI~~a~i~t-~--~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~- 320 (437)
+.+.|+| ..+|+||..+++...|++.|+||..-.... . .|..--+|+|...+-. ...++.+.+.+.+.-
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~------~a~~~L~~~~~el~~~ 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGP------AAVEKLDSLRNEIGFS 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHH------HHHHHHHHTHHHHCCS
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHH------HHHHHHHHHHHhcCcc
Confidence 3344444 368999999999999999999998665433 2 3555567887765321 111211122222210
Q ss_pred c--c-CCCcEEEEEeC---CCcchHHHHHHHHHHcCCeEEEEE
Q 013722 321 R--A-SEGLELELYTD---DRFGLLSDITRILREYGLCIRRAE 357 (437)
Q Consensus 321 ~--~-~~~~~iev~~~---DrpGLL~~I~~~l~~~~i~I~~A~ 357 (437)
. . +.-.++.|.+. ++||+++++.++|++.||||....
T Consensus 89 ~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 89 QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 0 0 12357777765 899999999999999999998866
No 40
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.84 E-value=0.035 Score=48.57 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=45.2
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEeCCCCCcCCCHHHHHHHHHHHhh
Q 013722 118 SIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKDQSSGCAIEDQKRLLKIKKLLCN 186 (437)
Q Consensus 118 ~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (437)
.|+|.+.||+|+|++|+.+|+.+++||..+.+.+. |. +++.-+ . .+...+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~--~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFA--E---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEEC--C---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEE--e---CCHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999765 22 555552 1 135566777766653
No 41
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.83 E-value=0.11 Score=52.59 Aligned_cols=130 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred CCeeEEEEE-eCCCCchHHHHHHHHHhCCCeEEEEEEEec---CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh
Q 013722 245 RDYTAVTIR-SKDRPKLLFDTVCCLTDMQYVVYHGTVVTG---RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER 320 (437)
Q Consensus 245 ~~~t~V~V~-~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~---~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~ 320 (437)
.+.+.|+|. .+|+||..+++...|++.|+||..-...+. .|..--+|+|...+. ++..+.|++ +.+
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~---------~~a~~~l~~-~~~ 331 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDG---------RRAMEILKK-LQV 331 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTH---------HHHHHHHHH-HHT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhH---------HHHHHHHHH-HHH
Confidence 456678888 799999999999999999999998766443 344455677765321 122233333 211
Q ss_pred ccC--------CCcEEEEEeC---CCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHH
Q 013722 321 RAS--------EGLELELYTD---DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQH 389 (437)
Q Consensus 321 ~~~--------~~~~iev~~~---DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~ 389 (437)
.+. .-.++.|.+. +.||+++++.++|.+.||||..- +|-..+ =.|.|.. ++.++.-+
T Consensus 332 ~~~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~Se~~--is~vV~~--------~d~~~Av~ 399 (421)
T 3ab4_A 332 QGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI--STSEIR--ISVLIRE--------DDLDAAAR 399 (421)
T ss_dssp TTTCSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE--EEETTE--EEEEEEG--------GGHHHHHH
T ss_pred HcCCceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE--EcCCCe--EEEEEeH--------HHHHHHHH
Confidence 111 1245777774 79999999999999999999844 343222 2355542 33444445
Q ss_pred HHhhccc
Q 013722 390 QIGRTIL 396 (437)
Q Consensus 390 ~L~~~~~ 396 (437)
.|++..+
T Consensus 400 ~Lh~~f~ 406 (421)
T 3ab4_A 400 ALHEQFQ 406 (421)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 5555443
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.75 E-value=0.023 Score=51.78 Aligned_cols=111 Identities=11% Similarity=0.082 Sum_probs=71.4
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHhCCceEEEEEEEE---eCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCc
Q 013722 25 EHATVIQVD-SVNRHGILLEVIQFLVDLNLVITKAYISS---DGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASF 100 (437)
Q Consensus 25 ~~~~~I~V~-~~DrpGLla~i~~~L~~~glnI~~A~I~t---~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 100 (437)
.+...|+|. .||+||..+++...|++.|+||.--.... .++.....|.+...+ .+.....|.+....
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d---------~~~~~~~l~~~~~~ 103 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV---------GPAAVEKLDSLRNE 103 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGG---------HHHHHHHHHTTHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhh---------HHHHHHHHHHHHhh
Confidence 356777776 69999999999999999999998543322 245555567774321 12222222221100
Q ss_pred ccCcceeeeecCCCceEEEEEEe---CCCcchHHHHHHHHHhCCCeEEEEE
Q 013722 101 LNSMRSSVGVVPSKEYTSIELTG---TDRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 101 ~~~~~r~v~~~~~~~~t~i~v~~---~DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
. ....+. .+.+...|.|+| ..+||+.+++..+|++.|+||.-..
T Consensus 104 -~-~~~~v~--~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 104 -I-GFSQLL--YDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp -H-CCSEEE--EECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -h-ceeeEE--EecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 0 001122 123456677775 6899999999999999999998775
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.73 E-value=0.21 Score=50.53 Aligned_cols=109 Identities=16% Similarity=0.238 Sum_probs=72.9
Q ss_pred CeEEEEEE-eCCCccHHHHHHHHHHhCCceEEEEEEEEe---CCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCcc
Q 013722 26 HATVIQVD-SVNRHGILLEVIQFLVDLNLVITKAYISSD---GGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFL 101 (437)
Q Consensus 26 ~~~~I~V~-~~DrpGLla~i~~~L~~~glnI~~A~I~t~---~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~ 101 (437)
+.+.|+|. .+|+||.++++...|+++|+||.--...|. .|...-.|.|... .. +...+.|++ +.....+
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~--~~---~~a~~~l~~-~~~~~~~- 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS--DG---RRAMEILKK-LQVQGNW- 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT--TH---HHHHHHHHH-HHTTTTC-
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech--hH---HHHHHHHHH-HHHHcCC-
Confidence 56677887 699999999999999999999986655443 3544445777421 11 122233333 3222211
Q ss_pred cCcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEE
Q 013722 102 NSMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSA 147 (437)
Q Consensus 102 ~~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A 147 (437)
..+.. ..+...++|++. ++||.++++..+|++.|+||...
T Consensus 336 ----~~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 336 ----TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp ----SEEEE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred ----ceEEE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11221 235778889885 89999999999999999999844
No 44
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.59 E-value=0.016 Score=53.14 Aligned_cols=49 Identities=8% Similarity=0.328 Sum_probs=36.3
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEec-----CceeEEEEEEEe
Q 013722 116 YTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH-----NARAAALLHVKD 164 (437)
Q Consensus 116 ~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~-----~~~~~d~F~V~~ 164 (437)
...|.|.+.||||+|++|+.+|+++++||...+..+. ++.+.-.+.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 5678999999999999999999999999999999884 345555544443
No 45
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.49 E-value=0.018 Score=52.80 Aligned_cols=48 Identities=25% Similarity=0.309 Sum_probs=36.2
Q ss_pred cEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecC-----CeEEEEEEEEc
Q 013722 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMG-----RKVKDTFFVTD 373 (437)
Q Consensus 326 ~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g-----~~a~D~F~v~d 373 (437)
..|.|.+.||||+|++|+++|+++++||.+....+.. +.|.-.+.+.+
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 4789999999999999999999999999999998853 25655566643
No 46
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.02 E-value=0.036 Score=50.46 Aligned_cols=108 Identities=15% Similarity=0.069 Sum_probs=71.1
Q ss_pred CCCeeEEEEE-eCCCCchHHHHHHHHHhCCCeEEEEEEEec---CCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHh
Q 013722 244 DRDYTAVTIR-SKDRPKLLFDTVCCLTDMQYVVYHGTVVTG---RMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE 319 (437)
Q Consensus 244 ~~~~t~V~V~-~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~---~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~ 319 (437)
+.+.+.|+|. .||+||..+++...|++.|+||-.-..... .+..-.+|.+...+.. ....+.+.+...+.
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~------~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGP------AAVEKLDSLRNEIG 105 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHH------HHHHHHHTTHHHHC
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHH------HHHHHHHHHHhhhc
Confidence 3456677775 699999999999999999999987644332 3466667777654321 22222222222221
Q ss_pred h-cc---CCCcEEEEEe---CCCcchHHHHHHHHHHcCCeEEEEE
Q 013722 320 R-RA---SEGLELELYT---DDRFGLLSDITRILREYGLCIRRAE 357 (437)
Q Consensus 320 ~-~~---~~~~~iev~~---~DrpGLL~~I~~~l~~~~i~I~~A~ 357 (437)
. .. +.-.+|.|.+ ...||+.+++-++|++.||||..--
T Consensus 106 ~~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 106 FSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp CSEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eeeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 0 00 1123455555 6789999999999999999998853
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.60 E-value=0.11 Score=53.37 Aligned_cols=107 Identities=12% Similarity=0.173 Sum_probs=71.2
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHH--------
Q 013722 26 HATVIQVDS---VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTV-------- 94 (437)
Q Consensus 26 ~~~~I~V~~---~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L-------- 94 (437)
+...|+|.+ +++||+.+++..+|+++|+||..-...+... --+|.|...+ .+..++.|++.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~~~ 389 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEED-----VDKALKALKREFGDFGKKSF 389 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGGG-----HHHHHHHHHHHHCC----CT
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEechH-----HHHHHHHHHHHHhhhccccc
Confidence 567888885 7889999999999999999998655433221 2247774321 124555566555
Q ss_pred hhccCcccCcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEE
Q 013722 95 ETNASFLNSMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVS 146 (437)
Q Consensus 95 ~~~~~~~~~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~ 146 (437)
.....+ ..+. ...+...++|+|. ++||.++++..+|++.|+||..
T Consensus 390 ~~~~~~-----~~v~--~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 390 LNNNLI-----RDVS--VDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM 437 (473)
T ss_dssp TSCCCE-----EEEE--EEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE
T ss_pred cccccc-----ceEE--EeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE
Confidence 211000 0111 1235667888885 5899999999999999999943
No 48
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.57 E-value=0.24 Score=49.90 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=42.8
Q ss_pred cEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEE
Q 013722 326 LELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVT 372 (437)
Q Consensus 326 ~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~ 372 (437)
..|-+.-.|+||.+..|+.+|.++||||......|.|+.+.-++.|.
T Consensus 332 ~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 332 RRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 56778889999999999999999999999999999998888777774
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=92.09 E-value=0.7 Score=47.10 Aligned_cols=108 Identities=12% Similarity=0.163 Sum_probs=69.8
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCccc
Q 013722 26 HATVIQVDS---VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLN 102 (437)
Q Consensus 26 ~~~~I~V~~---~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 102 (437)
+.+.|+|.. ++.||.++++...|+++|++|..- .+... --.|.|...+-.. ..+.+.+.|......
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~--~is~~V~~~d~~~-----~~~~~~~el~~~~~~-- 365 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVD--SVSLVIEDCKLDG-----KCDKIIEEIKKQCNP-- 365 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETT--EEEEEEEHHHHTT-----THHHHHHHHHHHSCC--
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCC--EEEEEEecchHHH-----HHHHHHHHHHHhcCC--
Confidence 456778875 689999999999999999999742 22222 1236774322111 122333334332210
Q ss_pred CcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEEE
Q 013722 103 SMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAEI 149 (437)
Q Consensus 103 ~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~i 149 (437)
..+. -..+...|+|+|. ++||+.+++..+|++.|+||....-
T Consensus 366 ---~~v~--v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 366 ---DSIE--IHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQ 410 (446)
T ss_dssp ---SEEE--EEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---CcEE--EeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 0111 1235778999875 5899999999999999999987653
No 50
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=92.01 E-value=0.88 Score=46.68 Aligned_cols=100 Identities=10% Similarity=0.064 Sum_probs=69.0
Q ss_pred CCeeEEEEEe---CCCCchHHHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHH---
Q 013722 245 RDYTAVTIRS---KDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAI--- 318 (437)
Q Consensus 245 ~~~t~V~V~~---~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l--- 318 (437)
.+.+.|.|.+ +++||..+++..+|++.|+||..-...+.. . --+|.|...+ .++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse-~-~Is~~V~~~d---------~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE-T-NISLVVSEED---------VDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT-C-CEEEEEEGGG---------HHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC-C-EEEEEEechH---------HHHHHHHHHHHHhhh
Confidence 4567888885 778899999999999999999877664432 1 2356666532 223344454444
Q ss_pred -----hhc--cC------CCcEEEEEeC---CCcchHHHHHHHHHHcCCeEEE
Q 013722 319 -----ERR--AS------EGLELELYTD---DRFGLLSDITRILREYGLCIRR 355 (437)
Q Consensus 319 -----~~~--~~------~~~~iev~~~---DrpGLL~~I~~~l~~~~i~I~~ 355 (437)
... .. .-.++.|.+. ++||.++++.++|.+.||||..
T Consensus 385 ~~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM 437 (473)
T ss_dssp ---CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE
T ss_pred cccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE
Confidence 211 11 1245777775 5899999999999999999944
No 51
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.91 E-value=0.53 Score=49.05 Aligned_cols=62 Identities=24% Similarity=0.307 Sum_probs=50.5
Q ss_pred CCcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeec--CCeEEEEEEEEcCCCCCCChHHHHHHHH
Q 013722 324 EGLELELYTDDRFGLLSDITRILREYGLCIRRAEISTM--GRKVKDTFFVTDASGNPVDPKIVDSIQH 389 (437)
Q Consensus 324 ~~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~--g~~a~D~F~v~d~~g~~l~~~~~~~l~~ 389 (437)
.++.+-+.-.|+||.+..|+..|.++||||...++... |+.+.-++.+.+ +++++..++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~----~~~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ----DVPDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS----CCCHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC----CCCHHHHHHHhc
Confidence 35788899999999999999999999999999999764 677777777732 566666677664
No 52
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.96 E-value=0.79 Score=47.73 Aligned_cols=63 Identities=17% Similarity=0.289 Sum_probs=47.4
Q ss_pred CCceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEec--CceeEEEEEEEeCCCCCcCCCHHHHHHHH
Q 013722 113 SKEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH--NARAAALLHVKDQSSGCAIEDQKRLLKIK 181 (437)
Q Consensus 113 ~~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~--~~~~~d~F~V~~~~~g~~~~~~~~~~~l~ 181 (437)
....+.+.+.-.|+||.+.+|+..|.++|+||.+.++... ++.+.-++.+.+ ++ +++.+++|+
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~-----~~-~~~~l~~l~ 515 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ-----DV-PDDVRTAIA 515 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS-----CC-CHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC-----CC-CHHHHHHHh
Confidence 3456788888999999999999999999999999999863 455555555543 33 355556555
No 53
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.62 E-value=0.47 Score=45.41 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=47.7
Q ss_pred CcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEE-EEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 325 GLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKD-TFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 325 ~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D-~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
.|.|-+..+|+||-||++-..|+.+|||+.+-.-...+.+.++ .||| |.+|..-+ +..++.-+.|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d-~~v~~aL~~L~~ 267 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHRED-QNVHNALENLRE 267 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTS-HHHHHHHHHHHT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCc-HHHHHHHHHHHH
Confidence 3556666679999999999999999999999888877665554 7887 56676533 333333344443
No 54
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.30 E-value=1.6 Score=42.58 Aligned_cols=47 Identities=17% Similarity=0.342 Sum_probs=38.9
Q ss_pred CCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEE-EEEEEcCCCCCCCh
Q 013722 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKD-TFFVTDASGNPVDP 381 (437)
Q Consensus 334 DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D-~F~v~d~~g~~l~~ 381 (437)
|+||-||++-..|+.+|||+.+-.-.....+-.+ .||| |.+|..-++
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~ 264 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWEE 264 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTSH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCCH
Confidence 7999999999999999999999888877777666 7777 567766443
No 55
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=88.99 E-value=3.5 Score=42.62 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=70.6
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCC-cHHHHHHHHHHHhhccCcc
Q 013722 26 HATVIQVDS---VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIG-DQATISYIKTTVETNASFL 101 (437)
Q Consensus 26 ~~~~I~V~~---~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~-~~~~~~~l~~~L~~~~~~~ 101 (437)
+.+.|+|.+ ++++|.++++..+|+++|++|.-- .+.... -+|.|...+..... ..+.++.+.+.|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~sse~s--is~~v~~~~~~~~~~~~~~l~~~~~el~~~~--- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSEVS--ISLTLDPSKLWSRELIQQELDHVVEELEKIA--- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEETTE--EEEEECCGGGSSSCCCHHHHHHHHHHHTTTS---
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeCCCe--EEEEEechHhhhhhHHHHHHHHHHHHhCCCC---
Confidence 567788874 789999999999999999999855 232221 23666322211110 1234444444443311
Q ss_pred cCcceeeeecCCCceEEEEEEeC--CCcchHHHHHHHHHhCCCeEEEEE
Q 013722 102 NSMRSSVGVVPSKEYTSIELTGT--DRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 102 ~~~~r~v~~~~~~~~t~i~v~~~--DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
.+.. ..+...|+|+|. ..||+.+++..+|++.|+||....
T Consensus 413 -----~v~~--~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs 454 (510)
T 2cdq_A 413 -----VVNL--LKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS 454 (510)
T ss_dssp -----EEEE--EEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred -----eEEE--eCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE
Confidence 1111 225677888887 778999999999999999998764
No 56
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=88.95 E-value=0.82 Score=39.42 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=62.3
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCccc
Q 013722 26 HATVIQVDS---VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLN 102 (437)
Q Consensus 26 ~~~~I~V~~---~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 102 (437)
+...|+|.+ +++||..+++...|+++|+||.--. +... --+|+|.+. . ..+.+.+.|...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~--~------~~~~il~~l~~~----- 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDND--K------NLPDIVRALSDI----- 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCC--T------THHHHHHHHTTT-----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECCh--H------HHHHHHHHHhcc-----
Confidence 567888874 5789999999999999999996332 2222 223666321 1 122333333321
Q ss_pred CcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEE
Q 013722 103 SMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 103 ~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
..+.. ..+...++|.|. ++||+.+++..+|+ |+||....
T Consensus 80 ---~~v~~--~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 ---GDVTV--DKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp ---EEEEE--EEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred ---CeEEE--eCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 11111 225678888875 68999999999999 99987754
No 57
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.95 E-value=0.92 Score=45.61 Aligned_cols=50 Identities=10% Similarity=0.264 Sum_probs=43.8
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEe
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~ 164 (437)
+...|.+.-.|+||.+..|+.+|+++|+||...++.+.|+.+.-++.+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 45568888999999999999999999999999999998888777777665
No 58
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=88.71 E-value=0.74 Score=44.65 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=60.3
Q ss_pred hCC-CeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhhccCCCcEEEEEeC-CCcchHHHHHHHHH
Q 013722 270 DMQ-YVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYTD-DRFGLLSDITRILR 347 (437)
Q Consensus 270 ~~~-lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~iev~~~-DrpGLL~~I~~~l~ 347 (437)
..| |+|+.-.|....+ ..-.|+|.......... .....|.|-+..+ |+||-||++-..|+
T Consensus 163 ~Yg~L~il~~~I~D~~~-N~TRFlvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~Fa 224 (313)
T 3mwb_A 163 EQPGLNVLAEDIGDNPD-AVTRFILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQFA 224 (313)
T ss_dssp HCTTCEEEESCCCSCTT-CEEEEEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHHHH
T ss_pred HcCChhhhhhcccCCCc-ceeEEEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 346 7777766655332 23367777654421110 0012466777775 99999999999999
Q ss_pred HcCCeEEEEEeeecCCeEEE-EEEEEcCCCCCCC
Q 013722 348 EYGLCIRRAEISTMGRKVKD-TFFVTDASGNPVD 380 (437)
Q Consensus 348 ~~~i~I~~A~I~T~g~~a~D-~F~v~d~~g~~l~ 380 (437)
.+|||+.+-.-.....+-.+ .||| |.+|..-+
T Consensus 225 ~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d 257 (313)
T 3mwb_A 225 SRGVNLSRIESRPTGQYLGHYFFSI-DADGHATD 257 (313)
T ss_dssp TTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTS
T ss_pred HCCccEEEEEEeecCCCCccEEEEE-EEeCCCCc
Confidence 99999998888776655544 7888 55676533
No 59
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.14 E-value=5.5 Score=40.46 Aligned_cols=103 Identities=10% Similarity=0.076 Sum_probs=66.9
Q ss_pred CeeEEEEEe---CCCCchHHHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHh-hc
Q 013722 246 DYTAVTIRS---KDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIE-RR 321 (437)
Q Consensus 246 ~~t~V~V~~---~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~-~~ 321 (437)
+.+.|+|.. ++.||..+++...|++.++||.... .+. .--+|.|...+-.. ..+.+.+.|.+.+. ..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~---~~~-~~is~~V~~~d~~~-----~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP---SGV-DSVSLVIEDCKLDG-----KCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC---EET-TEEEEEEEHHHHTT-----THHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe---cCC-CEEEEEEecchHHH-----HHHHHHHHHHHhcCCCc
Confidence 455777774 6899999999999999999997542 111 12346665532110 12333333333221 00
Q ss_pred c---CCCcEEEEEeC---CCcchHHHHHHHHHHcCCeEEEEE
Q 013722 322 A---SEGLELELYTD---DRFGLLSDITRILREYGLCIRRAE 357 (437)
Q Consensus 322 ~---~~~~~iev~~~---DrpGLL~~I~~~l~~~~i~I~~A~ 357 (437)
. ..-.+|.|.+. ..||+.+++.++|.+.||||..-.
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 0 11357888775 589999999999999999998754
No 60
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=88.05 E-value=1.3 Score=42.02 Aligned_cols=98 Identities=10% Similarity=0.176 Sum_probs=62.0
Q ss_pred CCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhhccCCCcEEEEEe---CCCcchHHHHHHHHH
Q 013722 271 MQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIERRASEGLELELYT---DDRFGLLSDITRILR 347 (437)
Q Consensus 271 ~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~iev~~---~DrpGLL~~I~~~l~ 347 (437)
.||+|..-.|....+ ..-.|+|..... +.. ...|.|-+.. .|+||-||++-..|+
T Consensus 154 ygL~il~~~I~D~~~-N~TRF~vl~~~~-~~~--------------------~~ktsl~f~~~~~~~~pGaL~~~L~~Fa 211 (267)
T 2qmw_A 154 YGFTPIDTHIEDYPH-NVTRFLVIKNQQ-QFD--------------------QNATSLMFLITPMHDKPGLLASVLNTFA 211 (267)
T ss_dssp GTCCEEEECCCSCSC-CEEEEEEEESCC-CCC--------------------SSCSEEEEEEEESSCCTTHHHHHHHHHH
T ss_pred CCCcEeeccccCCCC-CceEEEEEecCC-CCC--------------------CCeEEEEEEcCCCCCCcChHHHHHHHHH
Confidence 367777666655332 223677666443 111 1245677777 899999999999999
Q ss_pred HcCCeEEEEEeeecCCeEEE-EEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 348 EYGLCIRRAEISTMGRKVKD-TFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 348 ~~~i~I~~A~I~T~g~~a~D-~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
.+|||+.+-.-...+.+-++ .|||. .+ .. .++..++.-+.|..
T Consensus 212 ~~gINLtkIESRP~~~~~~~Y~FfiD-~e-~~-~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 212 LFNINLSWIESRPLKTQLGMYRFFVQ-AD-SA-ITTDIKKVIAILET 255 (267)
T ss_dssp TTTCCEEEEEEEECSSSTTCEEEEEE-ES-CC-SCHHHHHHHHHHHH
T ss_pred HcCCCeeEEEEeecCCCCccEEEEEE-Ee-cC-CcHHHHHHHHHHHH
Confidence 99999999888777655444 78884 44 33 33333333344443
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.21 E-value=0.96 Score=45.65 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=40.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEE
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVF 71 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F 71 (437)
+...|.+.=+|.||.+.+|..+|+++|+||..-...|.+++++-+.
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~ 387 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVM 387 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEE
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEE
Confidence 5689999999999999999999999999999877788888774333
No 62
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=86.96 E-value=1.6 Score=41.73 Aligned_cols=54 Identities=17% Similarity=0.055 Sum_probs=42.8
Q ss_pred ceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCc-eeEEEEEEEeCCCCCc
Q 013722 115 EYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA-RAAALLHVKDQSSGCA 170 (437)
Q Consensus 115 ~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~-~~~d~F~V~~~~~g~~ 170 (437)
..|.|.+..+|+||-|+++-+.|+.+|+|+.+.+.....+ ...=.|||.- .|..
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC
Confidence 3466777778999999999999999999999999886444 4566777766 3554
No 63
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.29 E-value=5.1 Score=40.32 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=42.7
Q ss_pred CceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEE
Q 013722 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVK 163 (437)
Q Consensus 114 ~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~ 163 (437)
.....|.+.-.|.||.|..|+.+|+++|+||..-...|.++.+--+.-|.
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 35689999999999999999999999999999999999777665544443
No 64
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=83.94 E-value=2.3 Score=43.26 Aligned_cols=34 Identities=38% Similarity=0.448 Sum_probs=29.7
Q ss_pred CcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEe
Q 013722 325 GLELELYTDDRFGLLSDITRILREYGLCIRRAEI 358 (437)
Q Consensus 325 ~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I 358 (437)
++-+.+...|+||.|++|+.+|.++||+|.+..=
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 4789999999999999999999999999988643
No 65
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=83.75 E-value=6.6 Score=38.17 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=39.2
Q ss_pred eEEEEEEeC--CCcchHHHHHHHHHhCCCeEEEEEEEecCce-eEEEEEEEeCCCCCc
Q 013722 116 YTSIELTGT--DRPGLLSEVSAVLTDLSCSVVSAEIWTHNAR-AAALLHVKDQSSGCA 170 (437)
Q Consensus 116 ~t~i~v~~~--DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~-~~d~F~V~~~~~g~~ 170 (437)
.+.+.+..+ |+||-|+++-..|+.+|+|+.+.+.....+. ..=.|||.- .|..
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~ 261 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAAP 261 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSCT
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCCc
Confidence 344444444 7999999999999999999999998865554 455667665 4654
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=83.08 E-value=3.2 Score=40.15 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=42.3
Q ss_pred ceEEEEEEeC-CCcchHHHHHHHHHhCCCeEEEEEEEecCc-eeEEEEEEEeCCCCCc
Q 013722 115 EYTSIELTGT-DRPGLLSEVSAVLTDLSCSVVSAEIWTHNA-RAAALLHVKDQSSGCA 170 (437)
Q Consensus 115 ~~t~i~v~~~-DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~-~~~d~F~V~~~~~g~~ 170 (437)
..|.|.+..+ |+||-|+++-+.|+.+|+|+.+.+.....+ ...=.|||.- .|..
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCCC
Confidence 5677777785 999999999999999999999998876443 4455677765 3554
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=79.01 E-value=3.4 Score=42.01 Aligned_cols=51 Identities=20% Similarity=0.336 Sum_probs=36.8
Q ss_pred CceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEec--CceeEEEEEEEe
Q 013722 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTH--NARAAALLHVKD 164 (437)
Q Consensus 114 ~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~--~~~~~d~F~V~~ 164 (437)
...+-+.+...|+||.|++|+++|.++|++|.+..-.-. ++....+..+|.
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 356788899999999999999999999999998765432 112245556665
No 68
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=76.70 E-value=8.9 Score=36.14 Aligned_cols=50 Identities=20% Similarity=0.199 Sum_probs=40.2
Q ss_pred ceEEEEEEe---CCCcchHHHHHHHHHhCCCeEEEEEEEecCc-eeEEEEEEEe
Q 013722 115 EYTSIELTG---TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNA-RAAALLHVKD 164 (437)
Q Consensus 115 ~~t~i~v~~---~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~-~~~d~F~V~~ 164 (437)
..|.|.+.. +|+||-|+++-+.|+.+|+|+...+.....+ ...=.|||.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 455666666 8999999999999999999999999886444 4566777766
No 69
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=72.95 E-value=6.1 Score=40.83 Aligned_cols=134 Identities=13% Similarity=0.136 Sum_probs=79.4
Q ss_pred CeeEEEEE---eCCCCchHHHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCC-CcHHHHHHHHHHHHHHHhhc
Q 013722 246 DYTAVTIR---SKDRPKLLFDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPI-SSEAERQRVMACLEAAIERR 321 (437)
Q Consensus 246 ~~t~V~V~---~~DrpgL~~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~-~~~~~~~~l~~~L~~~l~~~ 321 (437)
+.+.|.|. +++++|..+++...|++.|+||..-.. .... -+|.|...+.... .....++++.+.|.. + ..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~s-se~s---is~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~~ 413 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVAT-SEVS---ISLTLDPSKLWSRELIQQELDHVVEELEK-I-AV 413 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEE-ETTE---EEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-SE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEe-CCCe---EEEEEechHhhhhhHHHHHHHHHHHHhCC-C-Ce
Confidence 55678887 478999999999999999999997732 1122 2455554331110 011223333222221 0 00
Q ss_pred c---CCCcEEEEEeC--CCcchHHHHHHHHHHcCCeEEEEEeeecCC-eEEEEEEEEcCCCCCCChHHHHHHHHHHhhcc
Q 013722 322 A---SEGLELELYTD--DRFGLLSDITRILREYGLCIRRAEISTMGR-KVKDTFFVTDASGNPVDPKIVDSIQHQIGRTI 395 (437)
Q Consensus 322 ~---~~~~~iev~~~--DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~-~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~ 395 (437)
. ..-.+|.|.+. ..||+.+++-.+|.+.||||..-. .|. ...=.|.|.. ++.++.-+.|++..
T Consensus 414 v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~--------~d~~~Av~aLH~~f 482 (510)
T 2cdq_A 414 VNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNE--------AEAEGCVQALHKSF 482 (510)
T ss_dssp EEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEH--------HHHHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeH--------HHHHHHHHHHHHHH
Confidence 0 11246777776 678999999999999999998753 332 2233466642 34444445555544
Q ss_pred c
Q 013722 396 L 396 (437)
Q Consensus 396 ~ 396 (437)
+
T Consensus 483 ~ 483 (510)
T 2cdq_A 483 F 483 (510)
T ss_dssp H
T ss_pred h
Confidence 3
No 70
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=64.31 E-value=7 Score=39.31 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=45.2
Q ss_pred CcEEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCe-EEEEEEEEcCCCCCCChHHHHHHHHHHhh
Q 013722 325 GLELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRK-VKDTFFVTDASGNPVDPKIVDSIQHQIGR 393 (437)
Q Consensus 325 ~~~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~-a~D~F~v~d~~g~~l~~~~~~~l~~~L~~ 393 (437)
.|.|-+..+|+||-|+++-..|+.+|||+.+-.-.....+ -+=.||| |.+ ...++..+++-+.|..
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e--h~~d~~v~~AL~eL~~ 100 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD--KRTKPVLGSIIKSLRN 100 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC--GGGHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe--eCCCHHHHHHHHHHHh
Confidence 4566677789999999999999999999987777666444 3447888 444 2233334444444444
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=54.55 E-value=17 Score=36.47 Aligned_cols=51 Identities=10% Similarity=0.069 Sum_probs=40.5
Q ss_pred CceEEEEEEeCCCcchHHHHHHHHHhCCCeEEEEEEEecC-ceeEEEEEEEe
Q 013722 114 KEYTSIELTGTDRPGLLSEVSAVLTDLSCSVVSAEIWTHN-ARAAALLHVKD 164 (437)
Q Consensus 114 ~~~t~i~v~~~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~-~~~~d~F~V~~ 164 (437)
...|.|.+..+|+||-|+++-+.|+.+|+|+...+..-.. +...=.|+|.-
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3567777777999999999999999999999988877643 34556677754
No 72
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=44.47 E-value=54 Score=26.01 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=36.2
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHhCCce-EEEEEEEEeCCEEEEEEEEEeCCCCCC
Q 013722 26 HATVIQVDSVNRHGILLEVIQFLVDLNLV-ITKAYISSDGGYLMDVFYVTDINGQKI 81 (437)
Q Consensus 26 ~~~~I~V~~~DrpGLla~i~~~L~~~gln-I~~A~I~t~~g~~~d~F~V~~~~g~~~ 81 (437)
+++.+.+.+.| +..+...|.+.|.. +...-.....|.. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 88888999999999 7654433444543 88999999864
No 73
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=44.25 E-value=1e+02 Score=26.51 Aligned_cols=92 Identities=7% Similarity=0.043 Sum_probs=57.4
Q ss_pred HHHHHHHHhCCCeEEEEEEEecCCeEEEEEEEEccCCCCCCcHHHHHHHHHHHHHHHhh----ccCCCcEEEEEeCCCcc
Q 013722 262 FDTVCCLTDMQYVVYHGTVVTGRMEAYQEYYIKHVDGFPISSEAERQRVMACLEAAIER----RASEGLELELYTDDRFG 337 (437)
Q Consensus 262 ~~v~~~L~~~~lnI~~a~i~t~~g~ald~F~V~~~~g~~~~~~~~~~~l~~~L~~~l~~----~~~~~~~iev~~~DrpG 337 (437)
.-+...+.. |+.+++.++...++..+-..+|..++|-.+ +.++.+-..|...|.+ .++..|.+||+++.--.
T Consensus 16 ~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~gi~l---ddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGldR 91 (164)
T 1ib8_A 16 EVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEGITL---NDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLER 91 (164)
T ss_dssp HHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSCCCH---HHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSSS
T ss_pred HHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCCCCH---HHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCCC
Confidence 334456667 999999999887654444566666666333 4788888888877773 23568999999863333
Q ss_pred hHHHHHHHHHHcCCeEEEEEeee
Q 013722 338 LLSDITRILREYGLCIRRAEIST 360 (437)
Q Consensus 338 LL~~I~~~l~~~~i~I~~A~I~T 360 (437)
-|..-...-.-.|= .++|.+
T Consensus 92 pL~~~~df~r~~G~---~V~V~l 111 (164)
T 1ib8_A 92 PLKTKDAVAGAVGK---YIHVGL 111 (164)
T ss_dssp CCSSHHHHHHHCSE---EEEEEC
T ss_pred CCCCHHHHHHhCCc---EEEEEE
Confidence 34444443344443 334555
No 74
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=43.54 E-value=1e+02 Score=24.69 Aligned_cols=66 Identities=9% Similarity=0.047 Sum_probs=50.0
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHhC---CceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhc
Q 013722 25 EHATVIQVDSVNRHGILLEVIQFLVDL---NLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETN 97 (437)
Q Consensus 25 ~~~~~I~V~~~DrpGLla~i~~~L~~~---glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~ 97 (437)
+-.+.+.|.+++.+++...|..++..+ +..+ ..+-+..|.|..-+..|. +.+.+.+..|-++|...
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~------v~S~eQv~aiY~~L~~~ 102 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITIN------ATHIEQVETLYEELGKI 102 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEEC------CSSHHHHHHHHHHHSCS
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEE------ECCHHHHHHHHHHHhcC
Confidence 456899999999999999999999998 7887 345556777776555542 34456778888888653
No 75
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=41.48 E-value=1.2e+02 Score=23.41 Aligned_cols=56 Identities=7% Similarity=0.045 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhccc
Q 013722 337 GLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396 (437)
Q Consensus 337 GLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~ 396 (437)
-+++++++.| ...+||.+|.|..++++....+.|.= .|. +++..++..+.|.+.-+
T Consensus 35 PvIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l-~G~--~~~~~~~ai~~L~~~~v 90 (98)
T 3ced_A 35 PIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHI-PYI--SSVDFGKFEKELIERQV 90 (98)
T ss_dssp HHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEE-SCC--CHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHH-CCcEEEEEEEeEEeCCEeEEEEEEEE-eCC--CHHHHHHHHHHHHHCCC
Confidence 4677777776 47889999999999999999998853 242 23455666677766433
No 76
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=40.14 E-value=13 Score=37.57 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=65.1
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCCCcHHHHHHHHHHHhhccCccc
Q 013722 26 HATVIQVDS---VNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKIGDQATISYIKTTVETNASFLN 102 (437)
Q Consensus 26 ~~~~I~V~~---~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 102 (437)
+.+.|+|.+ ++.+|..+++..+|+++|++|.--. +. +. --+|.|...+...-.....++++...|.....
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss-~~-sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~--- 379 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TS-EV-SVALTLDTTGSTSTGDTLLTQSLLMELSALCR--- 379 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EE-TT-EEEEEECCCCCSSTTCCSSCHHHHHHHHHHSC---
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eC-CC-eEEEEEeccccchhhHHHHHHHHHHHhccCCe---
Confidence 456777765 4778999999999999999987443 32 21 12366643221110011233455555543111
Q ss_pred CcceeeeecCCCceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEE
Q 013722 103 SMRSSVGVVPSKEYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSA 147 (437)
Q Consensus 103 ~~~r~v~~~~~~~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A 147 (437)
+. -..+...|+|+|. ..||+.+++..+|+. +||.-.
T Consensus 380 -----v~--~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI 418 (449)
T 2j0w_A 380 -----VE--VEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI 418 (449)
T ss_dssp -----EE--EEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE
T ss_pred -----EE--EeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE
Confidence 11 1235778999986 688999999999966 666533
No 77
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=32.46 E-value=33 Score=28.69 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=35.1
Q ss_pred CCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhcccccc
Q 013722 334 DRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTILQVK 399 (437)
Q Consensus 334 DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~~~~ 399 (437)
|-.|+++.|+..|++.||+|.. |+|+-. |--.|. .++.++..+.|.+....+.
T Consensus 74 ~~vGilA~is~pLA~agIsif~--iSty~t---D~IlVp--------~~~~~~Ai~aL~~~~~~~~ 126 (134)
T 1zhv_A 74 DETGIVLSVISPLSTNGIGIFV--VSTFDG---DHLLVR--------SNDLEKTADLLANAGHSLL 126 (134)
T ss_dssp SSCCHHHHHHHHHHTTTCCCEE--EECSSC---EEEEEE--------GGGHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHhCCCCeEE--EEeccc---cEEEEe--------HHHHHHHHHHHHHcCceee
Confidence 7899999999999999999976 566622 222232 2345555566666544443
No 78
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=30.81 E-value=99 Score=24.25 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhccc
Q 013722 338 LLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396 (437)
Q Consensus 338 LL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~ 396 (437)
+++++++.| ...+||.+|.|.+++++....+.|.= .|. ++..++..+.|.+.-+
T Consensus 37 iIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l-~G~---~~~~~~ai~~L~~~~v 90 (106)
T 3dhx_A 37 LLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEM-HGT---QQDTQAAIAWLQEHHV 90 (106)
T ss_dssp HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE-ESC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEE-eCC---HHHHHHHHHHHHHCCC
Confidence 677776665 35589999999999999999998852 232 3456666777776443
No 79
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=27.48 E-value=35 Score=28.85 Aligned_cols=35 Identities=9% Similarity=-0.015 Sum_probs=29.0
Q ss_pred CceEEEEEEe---CCCcchHHHHHHHHHhCCCeEEEEE
Q 013722 114 KEYTSIELTG---TDRPGLLSEVSAVLTDLSCSVVSAE 148 (437)
Q Consensus 114 ~~~t~i~v~~---~DrpGLL~~I~~~l~~~g~~I~~A~ 148 (437)
.+.+.|+|.+ +++||.+++|..+|+++|+||....
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~ 53 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA 53 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE
Confidence 3567788874 5789999999999999999996654
No 80
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=26.30 E-value=1.9e+02 Score=22.09 Aligned_cols=56 Identities=9% Similarity=0.179 Sum_probs=40.9
Q ss_pred cchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhccc
Q 013722 336 FGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396 (437)
Q Consensus 336 pGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~ 396 (437)
.-+++++++.| ...+||.+|.|..++++....+.|.= .|. ++..++..+.|.+.-+
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l-~G~---~~~~~~ai~~L~~~~v 92 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQL-LGE---EQNILAAIEGLRKLRV 92 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEE-ESC---HHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEE-ECC---HHHHHHHHHHHHHcCC
Confidence 35778888777 47789999999999999999998852 232 3455666677766443
No 81
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=26.29 E-value=1.5e+02 Score=24.02 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=34.5
Q ss_pred EEEEEeCCCcchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCC
Q 013722 327 ELELYTDDRFGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVD 380 (437)
Q Consensus 327 ~iev~~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~ 380 (437)
.+.+...| +..+.+.|.+.|+.+...-..+-.++ .||+.|++|..+.
T Consensus 68 hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~ie 114 (144)
T 3r6a_A 68 QATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVIE 114 (144)
T ss_dssp CEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEEE
Confidence 55566666 67788889999999987655544333 5899999998763
No 82
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=25.58 E-value=74 Score=26.43 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=33.0
Q ss_pred CceEEEEEEe---CCCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEe
Q 013722 114 KEYTSIELTG---TDRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164 (437)
Q Consensus 114 ~~~t~i~v~~---~DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~ 164 (437)
..+..|+|.+ .|-.|+++.|++.|++.|+.|.-.. | .-.|..+|..
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--t---y~tDhIlVp~ 117 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--G---YYHDHIFVQK 117 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--C---SSCEEEEEEG
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--e---ccccEEEEeh
Confidence 3556666665 6899999999999999999987654 4 2345555654
No 83
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=25.15 E-value=1.5e+02 Score=23.93 Aligned_cols=47 Identities=19% Similarity=0.094 Sum_probs=34.0
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEEEeCCEEEEEEEEEeCCCCCC
Q 013722 28 TVIQVDSVNRHGILLEVIQFLVDLNLVITKAYISSDGGYLMDVFYVTDINGQKI 81 (437)
Q Consensus 28 ~~I~V~~~DrpGLla~i~~~L~~~glnI~~A~I~t~~g~~~d~F~V~~~~g~~~ 81 (437)
..+.+...| +..+...|.+.|+.+...-.....|+ .|++.|++|..+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEE
Confidence 344455555 67778889999999987665555563 478999999854
No 84
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=24.47 E-value=49 Score=27.59 Aligned_cols=45 Identities=18% Similarity=0.312 Sum_probs=33.1
Q ss_pred ceEEEEEEeC---CCcchHHHHHHHHHhCCCeEEEEEEEecCceeEEEEEEEe
Q 013722 115 EYTSIELTGT---DRPGLLSEVSAVLTDLSCSVVSAEIWTHNARAAALLHVKD 164 (437)
Q Consensus 115 ~~t~i~v~~~---DrpGLL~~I~~~l~~~g~~I~~A~i~T~~~~~~d~F~V~~ 164 (437)
.+-.|+|.++ |-.|+++.|++.|++.||.|.-.. | .-.|..+|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--t---y~tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--T---FDGDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--C---SSCEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--e---ccccEEEEeH
Confidence 4556666654 888999999999999999987654 4 3346666654
No 85
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.37 E-value=44 Score=27.85 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=23.3
Q ss_pred eCCCcchHHHHHHHHHHcCCeEEEEEeeec
Q 013722 332 TDDRFGLLSDITRILREYGLCIRRAEISTM 361 (437)
Q Consensus 332 ~~DrpGLL~~I~~~l~~~~i~I~~A~I~T~ 361 (437)
+.|-.|+++.|+..|++.||+|.. |+|+
T Consensus 81 ~l~~vGi~a~is~~LA~agIsif~--iSty 108 (133)
T 1zvp_A 81 SLEAVGLTAAFATKLAEHGISANV--IAGY 108 (133)
T ss_dssp --CCSCHHHHHHHHHHHTTCCCEE--EECS
T ss_pred CccHHHHHHHHHHHHHhCCCCcEE--EEec
Confidence 368899999999999999999976 5665
No 86
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=23.34 E-value=2.6e+02 Score=21.68 Aligned_cols=49 Identities=14% Similarity=0.013 Sum_probs=35.8
Q ss_pred CCeeEEEEEeCCCCchHHHHHHHHHhCCCe-EEEEEEEecCCeEEEEEEEEccCCCC
Q 013722 245 RDYTAVTIRSKDRPKLLFDTVCCLTDMQYV-VYHGTVVTGRMEAYQEYYIKHVDGFP 300 (437)
Q Consensus 245 ~~~t~V~V~~~DrpgL~~~v~~~L~~~~ln-I~~a~i~t~~g~ald~F~V~~~~g~~ 300 (437)
.+++.+.+.+.| +......+...|.. +...-.....|.. |++.+|+|..
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~ 114 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHS 114 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCE
Confidence 456778888888 78888999999999 7654333223433 8999999973
No 87
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=21.03 E-value=2e+02 Score=22.04 Aligned_cols=65 Identities=12% Similarity=0.087 Sum_probs=43.0
Q ss_pred EEEEEeCCC---cchHHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCCChHHHHHHHHHHhhccc
Q 013722 327 ELELYTDDR---FGLLSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPVDPKIVDSIQHQIGRTIL 396 (437)
Q Consensus 327 ~iev~~~Dr---pGLL~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l~~~~~~~l~~~L~~~~~ 396 (437)
++.+.=... .-+++++++.| ...+||.+|.|..++++....+.|.= .|. ++..++..+.|.+.-+
T Consensus 25 lv~l~f~g~~~~~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l-~G~---~~~~~~ai~~L~~~~v 92 (101)
T 2qrr_A 25 LVRMEFTGATVDAPLMSQISRKY-NIDVSILSSDLDYAGGVKFGMMVAEL-FGN---EQDDSAAIEYLRENNV 92 (101)
T ss_dssp EEEEEECTTSCSSCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE-ESC---HHHHHHHHHHHHHTTC
T ss_pred EEEEEEcCCCcCchHHHHHHHHh-CCCEEEEEeeeeEcCCeeEEEEEEEE-eCC---HHHHHHHHHHHHHcCC
Confidence 455544433 24667776665 46678899999999999999998852 232 3445666677765433
No 88
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=20.79 E-value=1.3e+02 Score=23.77 Aligned_cols=38 Identities=11% Similarity=0.257 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCeEEEEEeeecCCeEEEEEEEEcCCCCCC
Q 013722 339 LSDITRILREYGLCIRRAEISTMGRKVKDTFFVTDASGNPV 379 (437)
Q Consensus 339 L~~I~~~l~~~~i~I~~A~I~T~g~~a~D~F~v~d~~g~~l 379 (437)
+..+.+.|.+.|+.+...-...-+.+ .||+.|++|..+
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~~~~g~---~~~~~DPdG~~i 146 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVTRPTGR---GVYFYDPDGFMI 146 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC-CCE---EEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCceecCCcc---EEEEECCCCCEE
Confidence 67777888999999977655443332 789999999865
Done!