Query 013723
Match_columns 437
No_of_seqs 264 out of 1031
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:54:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 5E-31 1.7E-35 254.4 5.6 229 21-316 24-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 1.5E-30 5.2E-35 254.3 8.5 235 21-322 25-269 (279)
3 2vkp_A BTB/POZ domain-containi 99.9 7.2E-23 2.5E-27 172.0 7.3 103 22-133 2-109 (109)
4 3htm_A Speckle-type POZ protei 99.9 5.6E-23 1.9E-27 185.6 6.3 122 21-159 27-149 (172)
5 2if5_A Zinc finger and BTB dom 99.9 9.4E-23 3.2E-27 174.5 6.3 101 22-130 19-120 (120)
6 3b84_A Zinc finger and BTB dom 99.9 4.8E-23 1.6E-27 176.8 4.4 100 22-132 18-117 (119)
7 4eoz_A Speckle-type POZ protei 99.9 2E-23 6.7E-28 183.5 1.7 122 21-159 18-140 (145)
8 2vpk_A Myoneurin; transcriptio 99.9 1.4E-22 4.7E-27 172.7 6.1 100 21-131 15-116 (116)
9 1r29_A B-cell lymphoma 6 prote 99.9 2.1E-22 7.2E-27 174.2 7.1 102 22-132 23-126 (127)
10 1buo_A POZ domain, protein (pr 99.9 1.9E-22 6.5E-27 173.4 6.5 100 21-132 21-120 (121)
11 2yy9_A Zinc finger and BTB dom 99.9 8.8E-23 3E-27 179.2 3.7 103 21-134 18-120 (135)
12 2z8h_A Transcription regulator 99.9 2.6E-22 8.8E-27 176.6 5.8 107 21-136 29-136 (138)
13 2q81_A MIZ-1 protein; BTB/POZ 99.9 2.2E-22 7.4E-27 172.7 4.5 98 21-130 20-117 (119)
14 3ga1_A Nucleus accumbens-assoc 99.9 1.8E-22 6.2E-27 175.4 3.9 100 22-132 27-127 (129)
15 3ohu_A Transcription regulator 99.8 1.7E-22 5.8E-27 174.3 3.2 100 21-129 25-125 (125)
16 2ppi_A Gigaxonin; BTB domain, 99.8 3.5E-22 1.2E-26 177.5 5.0 101 22-130 41-144 (144)
17 3m5b_A Zinc finger and BTB dom 99.8 6.8E-22 2.3E-26 170.4 5.5 94 22-131 24-117 (119)
18 2ihc_A Transcription regulator 99.8 4.4E-22 1.5E-26 172.0 3.5 101 21-130 22-123 (124)
19 3hqi_A Speckle-type POZ protei 99.8 1.5E-20 5.1E-25 185.9 6.8 131 22-169 168-302 (312)
20 3fkc_A Transcriptional regulat 99.8 6.1E-20 2.1E-24 157.1 4.7 87 22-114 25-112 (116)
21 2ast_A S-phase kinase-associat 99.5 1.8E-14 6.3E-19 130.1 5.1 95 31-134 3-127 (159)
22 4ajy_C Transcription elongatio 99.3 1.6E-12 5.6E-17 107.9 6.2 79 31-112 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 1.5E-11 5.2E-16 108.9 5.9 92 31-134 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 99.0 3E-11 1E-15 109.1 0.9 93 31-134 6-126 (160)
25 1hv2_A Elongin C, ELC1; protei 98.5 9.7E-08 3.3E-12 79.4 5.9 79 31-112 6-99 (99)
26 2fnj_C Transcription elongatio 98.5 1.1E-07 3.8E-12 78.6 5.0 79 31-112 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.4 2.8E-07 9.6E-12 83.9 6.0 95 30-133 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.9 9.6E-06 3.3E-10 68.9 4.3 79 31-112 19-112 (112)
29 3drz_A BTB/POZ domain-containi 97.6 0.00014 4.6E-09 61.0 7.4 92 30-130 7-105 (107)
30 2eqx_A Kelch repeat and BTB do 96.6 0.00044 1.5E-08 57.4 0.6 89 144-278 10-98 (105)
31 3drx_A BTB/POZ domain-containi 96.0 0.011 3.6E-07 55.1 6.6 93 31-132 14-113 (202)
32 3kvt_A Potassium channel prote 95.2 0.0057 1.9E-07 51.9 1.4 82 31-115 7-92 (115)
33 1s1g_A Potassium voltage-gated 94.0 0.037 1.3E-06 47.4 3.8 80 30-115 14-99 (124)
34 1t1d_A Protein (potassium chan 93.0 0.064 2.2E-06 44.2 3.4 82 31-115 3-89 (100)
35 2nz0_B Potassium voltage-gated 92.1 0.052 1.8E-06 47.6 1.8 81 29-115 35-121 (140)
36 1nn7_A Potassium channel KV4.2 92.1 0.062 2.1E-06 44.6 2.2 79 31-115 2-86 (105)
37 1pd7_B MAD1; PAH2, SIN3, eukar 73.8 0.94 3.2E-05 27.9 0.7 17 98-114 3-19 (26)
38 2r9r_B Paddle chimera voltage 52.1 11 0.00037 39.3 4.3 83 30-115 53-140 (514)
39 3b0b_C CENP-X, centromere prot 46.4 22 0.00075 27.9 4.2 43 339-398 6-48 (81)
40 2eqx_A Kelch repeat and BTB do 35.2 22 0.00076 28.5 2.7 35 93-133 6-40 (105)
41 4dra_E Centromere protein X; D 32.2 33 0.0011 27.1 3.2 43 339-398 10-52 (84)
42 2qzg_A Conserved uncharacteriz 22.1 38 0.0013 27.3 1.8 24 384-408 55-78 (94)
43 2qsb_A UPF0147 protein TA0600; 22.0 35 0.0012 27.3 1.5 24 384-408 51-74 (89)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=5e-31 Score=254.43 Aligned_cols=229 Identities=12% Similarity=0.066 Sum_probs=166.5
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-C--cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEec
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA 97 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~--e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~ 97 (437)
.++.+|.+|||+|.|||++|++||.+|+++|+||++||++. . ++...+|+|++++ +++|+.+++|+|||++.++.
T Consensus 24 ~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~ 101 (256)
T 3hve_A 24 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNE 101 (256)
T ss_dssp TCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-
T ss_pred HHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccH
Confidence 48899999999999999999999999999999999999874 3 4566789999997 79999999999999999999
Q ss_pred ccHhhHHHhhhhhccccccccccHHHHHHHHHHhhhccchhhHHHHHhhccchHhhhHhhchhhhHHHHHHhhcccCCCC
Q 013723 98 YNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRSVDSIASKTSVDPAN 177 (437)
Q Consensus 98 ~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~sw~~~i~~l~~c~~l~~~Ae~~~iv~rc~~sLa~ka~~~~~~ 177 (437)
+|+..++.||++|||++ |++.|++||.+.+. ..||.+++.+|+.+++ ..|..++.
T Consensus 102 ~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~~~----- 156 (256)
T 3hve_A 102 DTIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCL-----HHVHYLAT----- 156 (256)
T ss_dssp CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTC-----HHHHHHHH-----
T ss_pred hHHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCc-----HHHHHHHH-----
Confidence 99999999999999995 89999999999984 4699999999999984 34443332
Q ss_pred ccccccccCCCCCCcccccccccccccccCCCcchhhhcccCCHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHhhcCCc
Q 013723 178 VTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDIDLYKRVMIAVKSKGRMDGSVIGEALRIYAVRWLPDS 257 (437)
Q Consensus 178 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~~~~~rvi~am~~~g~~~~e~I~~al~~Ya~~~l~~~ 257 (437)
.|. ..+| ...+-.++|..|+.+.+..++....-. +.+|+.|++++++|+++..+.
T Consensus 157 ---~~i--~~~f------------------~~v~~~~~f~~L~~~~l~~lL~~d~L~-v~~E~~v~~av~~W~~~~~~~- 211 (256)
T 3hve_A 157 ---EYL--ETHF------------------RDVSSTEEFLELSPQKLKEVISLEKLN-VGNERYVFEAVIRWIAHDTEI- 211 (256)
T ss_dssp ---HHH--HHHH------------------HHHTTCHHHHSSCHHHHHHHHHCC--------CTTHHHHTTTCCC--CC-
T ss_pred ---HHH--HHHH------------------HHHhCCcchhcCCHHHHHHHHccCCCC-CCCHHHHHHHHHHHHHcCHHH-
Confidence 000 0001 011125799999999977777765443 246889999999998776542
Q ss_pred cccccchhhHHHHHHHHHHHHHhcCCCCCCccChHHHHHHhhhhhhcCCC-HHHHHHHHH
Q 013723 258 IDALVSDAQTLRNKCLVETIVCLLPTDKSVGCSCSFLLKLLKVSVLVGVD-NSAREDLVK 316 (437)
Q Consensus 258 ~~~~~~~~~~~~~r~llE~Iv~Llp~~k~~~vs~~fL~~lLr~a~~l~~s-~~cr~~LE~ 316 (437)
+......|++.| ++ +. +|..||.+.++...++..+ +.|+..|++
T Consensus 212 --------R~~~~~~ll~~V-Rf-----~~-l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 212 --------RKVHMKDVMSAL-WV-----SG-LDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp --------STTTHHHHHHHH-HH-----HT-TCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred --------HHHHHHHHHHhC-CC-----CC-CCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 113346899999 55 78 9999999999999999998 789999875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=1.5e-30 Score=254.28 Aligned_cols=235 Identities=16% Similarity=0.147 Sum_probs=181.5
Q ss_pred eeeccCcceeEEEEEC---CEEEEecCceeccCCHHHHHhhcCC-CcCCCCceeec------CCCCCHHHHHHHHHHhhC
Q 013723 21 RYVTSELATDVIINVG---EVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIV------DFPGGPKAFEICAKFCYG 90 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~---~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~------~~pgg~~~fe~~~~FcYt 90 (437)
.+|.+|.+|||+|.|| |++|+|||.||+++|+||++||++. +|+.+.+|+|+ +++ +++|+.+++|+||
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~~~Yt 102 (279)
T 3i3n_A 25 EQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIEYMYT 102 (279)
T ss_dssp HHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHHhhCc
Confidence 3788999999999998 9999999999999999999999985 67777899998 565 8999999999999
Q ss_pred ceEEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhhccchhhHHHHHhhccchHhhhHhhchhhhHHHHHHhh
Q 013723 91 MTVTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRSVDSIASK 170 (437)
Q Consensus 91 ~~i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~sw~~~i~~l~~c~~l~~~Ae~~~iv~rc~~sLa~k 170 (437)
|++.++.+|+..++.||++|||++ |++.|++||.+.+. ..||..++.+|+.+++ ..|..+
T Consensus 103 g~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~ 162 (279)
T 3i3n_A 103 GRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLH---------LSNCVAIHSLAHMYTL-----SQLALK 162 (279)
T ss_dssp SEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCC---------TTTHHHHHHHHHHTTC-----HHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCC---------cchHHHHHHHHHHcCc-----HHHHHH
Confidence 999999999999999999999985 89999999999984 4699999999999984 333333
Q ss_pred cccCCCCccccccccCCCCCCcccccccccccccccCCCcchhhhcccCCHHHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 013723 171 TSVDPANVTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDIDLYKRVMIAVKSKGRMDGSVIGEALRIYA 250 (437)
Q Consensus 171 a~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~~~~~rvi~am~~~g~~~~e~I~~al~~Ya 250 (437)
+. .|. ..+| ...+..++|..|+.+.+..++....-. +.+|+.|+++++.|+
T Consensus 163 ~~--------~~i--~~~f------------------~~v~~~~~f~~L~~~~l~~lL~~d~L~-v~sE~~vf~av~~W~ 213 (279)
T 3i3n_A 163 AA--------DMI--RRNF------------------HKVIQDEEFYTLPFHLIRDWLSDLEIT-VDSEEVLFETVLKWV 213 (279)
T ss_dssp HH--------HHH--HHTH------------------HHHTTSSGGGGSCHHHHHHHHTCSSCC-CSCHHHHHHHHHHHH
T ss_pred HH--------HHH--HHHH------------------HHHhcCcChhcCCHHHHHHHhcCcCCC-CCCHHHHHHHHHHHH
Confidence 31 000 0011 011224789999999966666544322 246889999999999
Q ss_pred HhhcCCccccccchhhHHHHHHHHHHHHHhcCCCCCCccChHHHHHHhhhhhhcCCCHHHHHHHHHHHhccc
Q 013723 251 VRWLPDSIDALVSDAQTLRNKCLVETIVCLLPTDKSVGCSCSFLLKLLKVSVLVGVDNSAREDLVKRISLKL 322 (437)
Q Consensus 251 ~~~l~~~~~~~~~~~~~~~~r~llE~Iv~Llp~~k~~~vs~~fL~~lLr~a~~l~~s~~cr~~LE~rIg~qL 322 (437)
++..+. +......|++.| ++ +. +|..+|...++...++..++.|+..|.+...-++
T Consensus 214 ~~~~~~---------r~~~~~~ll~~V-Rf-----~l-~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 214 QRNAEE---------RERYFEELFKLL-RL-----SQ-MKPTYLTRHVKPERLVANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HTTHHH---------HTTTHHHHHTTS-CG-----GG-SCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH
T ss_pred HcCHHH---------HHHHHHHHHHhc-CC-----CC-CCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc
Confidence 875431 112235788877 55 77 9999999999999999999999999988765443
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.87 E-value=7.2e-23 Score=172.01 Aligned_cols=103 Identities=28% Similarity=0.336 Sum_probs=92.6
Q ss_pred eeccCcceeEEEEECC----EEEEecCceeccCCHHHHHhhcCC-CcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEe
Q 013723 22 YVTSELATDVIINVGE----VKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFS 96 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~----~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it 96 (437)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||++. .|+. ..|.|++++ +++|+.+++|+|||++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 6788999999999998 999999999999999999999975 5555 889999987 7999999999999999999
Q ss_pred cccHhhHHHhhhhhccccccccccHHHHHHHHHHhhh
Q 013723 97 AYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (437)
Q Consensus 97 ~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l 133 (437)
.+|+..++.+|+++||++ |++.|++||.+++
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999995 8999999998764
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.87 E-value=5.6e-23 Score=185.56 Aligned_cols=122 Identities=18% Similarity=0.153 Sum_probs=112.6
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-CcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
.++.++.+|||+|.|+|++|++||.+|+++|+||++||.+. .+....+|.|++++ +++|+.+++|+||+++.++.+|
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~ 104 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 104 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHH
Confidence 47889999999999999999999999999999999999975 66667899999997 8999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHHHhhhccchhhHHHHHhhccchHhhhHhhch
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKI 159 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~sw~~~i~~l~~c~~l~~~Ae~~~i 159 (437)
+..++.+|++++|++ |.+.|++||.+.+. ..||..++.+|+.+++
T Consensus 105 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 105 ADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSA 149 (172)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHHHTCC---------TTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCcHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCc
Confidence 999999999999995 89999999999884 5689999999999874
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=9.4e-23 Score=174.55 Aligned_cols=101 Identities=25% Similarity=0.241 Sum_probs=92.3
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-CcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
++.++.+|||+|.|||++|++||.+|+++|+||++||++. .++....|+|++++ +++|+.+++|+|||++.++.+|+
T Consensus 19 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~ 96 (120)
T 2if5_A 19 QRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANV 96 (120)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGH
T ss_pred HHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHH
Confidence 7789999999999999999999999999999999999975 56667889999987 79999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHH
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~ 130 (437)
..++.||+++||++ |++.|++||+
T Consensus 97 ~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 97 GDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 99999999999995 8999999984
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.87 E-value=4.8e-23 Score=176.79 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=91.6
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccHh
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNVV 101 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV~ 101 (437)
++.+|.+|||+|.|||++|++||.+|+++|+||++||.+.. ..+|+|++++ +++|+.+++|+|||++.++.+|+.
T Consensus 18 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~ 92 (119)
T 3b84_A 18 QREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRD 92 (119)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred HHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHH
Confidence 78899999999999999999999999999999999998754 4689999987 799999999999999999999999
Q ss_pred hHHHhhhhhccccccccccHHHHHHHHHHhh
Q 013723 102 AARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (437)
Q Consensus 102 ~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~ 132 (437)
.++.||++|||++ |++.|++||.+.
T Consensus 93 ~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 93 QVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 9999999999995 899999999864
No 7
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.86 E-value=2e-23 Score=183.47 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=93.2
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-CcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
.++.++.+|||+|.|||+.|++||.+|+++|+||++||++. .++....|.|++++ +++|+.+++|+|||++.++.+|
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~ 95 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 95 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHH
Confidence 47889999999999999999999999999999999999975 45556789999987 7999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHHHhhhccchhhHHHHHhhccchHhhhHhhch
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKI 159 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~sw~~~i~~l~~c~~l~~~Ae~~~i 159 (437)
+..++.+|++++|++ |++.|++||.+.+ ...||..++.+|+.|++
T Consensus 96 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 96 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred HHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 999999999999995 8999999999988 56799999999999984
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=1.4e-22 Score=172.70 Aligned_cols=100 Identities=21% Similarity=0.335 Sum_probs=91.5
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeec--CCCCCHHHHHHHHHHhhCceEEEecc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV--DFPGGPKAFEICAKFCYGMTVTFSAY 98 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~--~~pgg~~~fe~~~~FcYt~~i~it~~ 98 (437)
.++.+|.+|||+|.|||++|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|||++.++.+
T Consensus 15 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~~~~ 89 (116)
T 2vpk_A 15 KQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTLNLDSW 89 (116)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCcccCHH
Confidence 37788999999999999999999999999999999999876 24567777 887 799999999999999999999
Q ss_pred cHhhHHHhhhhhccccccccccHHHHHHHHHHh
Q 013723 99 NVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNS 131 (437)
Q Consensus 99 NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~ 131 (437)
|+..++.||++|||++ |++.|++||.+
T Consensus 90 ~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 90 NVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 9999999999999985 89999999863
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.86 E-value=2.1e-22 Score=174.21 Aligned_cols=102 Identities=25% Similarity=0.396 Sum_probs=95.2
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-CcCCCCceee-cCCCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNI-VDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L-~~~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
++.++.+|||+|.|+|++|++||.+|+++|+||++||.+. .| ....|+| ++++ +++|+.+++|+|||++.++.+|
T Consensus 23 l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~~~~~ 99 (127)
T 1r29_A 23 LRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLNLREGN 99 (127)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcCcCHHH
Confidence 7889999999999999999999999999999999999986 44 6678999 8987 7999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHHHhh
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~ 132 (437)
+..|+.+|++|||++ |++.|++||.++
T Consensus 100 ~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 126 (127)
T 1r29_A 100 IMAVMATAMYLQMEH------VVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHHhc
Confidence 999999999999995 899999999863
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=1.9e-22 Score=173.42 Aligned_cols=100 Identities=23% Similarity=0.242 Sum_probs=93.5
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
.++.+|.+|||++.|+|++|++||.+|+++|+||++||++. ..+|+|++++ +++|+.+++|+|||++.++++|+
T Consensus 21 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~ 94 (121)
T 1buo_A 21 QMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDL 94 (121)
T ss_dssp HHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGH
T ss_pred HHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHH
Confidence 37889999999999999999999999999999999999863 4589999998 79999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHHhh
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~ 132 (437)
..++.||++|||++ |++.|++||.+.
T Consensus 95 ~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 95 DDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 99999999999995 899999999875
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.86 E-value=8.8e-23 Score=179.20 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=91.0
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
.++.++.+|||+|.|+|++|++||.||+++|+||++||.... ..+|+|++++ +++|+.+++|+|||++.++.+|+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v 92 (135)
T 2yy9_A 18 KQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNR 92 (135)
T ss_dssp HHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHH
Confidence 378899999999999999999999999999999999998754 4679999987 79999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHHhhhc
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~ 134 (437)
..|+.||++|||++ |++.|++||.+.+.
T Consensus 93 ~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 93 DQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 99999999999995 89999999998774
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.85 E-value=2.6e-22 Score=176.58 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=96.6
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeec-CCCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV-DFPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~-~~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
.++.++.+|||+|.|+|+.|++||.||+++|+||++||.+.... ...|.|+ +++ +++|+.+++|+|||++.++.+|
T Consensus 29 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~ 105 (138)
T 2z8h_A 29 DQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-ELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDN 105 (138)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-TEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-CceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHH
Confidence 37889999999999999999999999999999999999975322 3578885 787 7999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHHHhhhccc
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRS 136 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~s 136 (437)
|..|+.||++|||++ |++.|++||.+.+..+
T Consensus 106 v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 106 VDEVCRCVEFLSVHN------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp HHHHHHHHHHHTCGG------GHHHHHHHTTCCCSCC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHHHhcccc
Confidence 999999999999995 8999999999988654
No 13
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.85 E-value=2.2e-22 Score=172.69 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=90.9
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
.++.+|.+|||+|.|+|++|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+|||++.++.+|+
T Consensus 20 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~~~~~ 93 (119)
T 2q81_A 20 QQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSLSPENV 93 (119)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCccCHHHH
Confidence 37788999999999999999999999999999999999863 3578888886 79999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHH
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~ 130 (437)
..++.+|++|||++ |++.|++||.
T Consensus 94 ~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 94 DDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 99999999999995 8999999985
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=1.8e-22 Score=175.40 Aligned_cols=100 Identities=20% Similarity=0.262 Sum_probs=86.2
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeec-CCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIV-DFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~-~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
++.++.+|||+|.|||+.|++||.+|+++|+||++||.+. ...+|+|+ +++ +++|+.+++|+|||++.++.+|+
T Consensus 27 l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~ 101 (129)
T 3ga1_A 27 QRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQ 101 (129)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTH
T ss_pred HHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHH
Confidence 6788999999999999999999999999999999999876 45689996 887 79999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHHhh
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~ 132 (437)
..++.||++|||++ |++.|++||.+.
T Consensus 102 ~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 102 DLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 99999999999996 778999999875
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.85 E-value=1.7e-22 Score=174.32 Aligned_cols=100 Identities=19% Similarity=0.245 Sum_probs=90.5
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecC-CCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVD-FPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~-~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.+++ ++ +++|+.+++|+|||++.++.+|
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~~~ 101 (125)
T 3ohu_A 25 DQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSREN 101 (125)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCC--HHHHHHHHHHHTTSEEEECTTT
T ss_pred HHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCC--HHHHHHHHHhHcCCceEECHHH
Confidence 37889999999999999999999999999999999999975322 56889987 87 8999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHH
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFL 129 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL 129 (437)
+..++.||++|||++ |++.|++||
T Consensus 102 v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 102 IREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 999999999999996 677787765
No 16
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=3.5e-22 Score=177.49 Aligned_cols=101 Identities=11% Similarity=0.103 Sum_probs=90.0
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-C--cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecc
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAY 98 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~--e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~ 98 (437)
++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. . ++...+|.|++++ +++|+.+++|+|||++.++.+
T Consensus 41 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~ 118 (144)
T 2ppi_A 41 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNED 118 (144)
T ss_dssp TTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTT
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHH
Confidence 7889999999999999999999999999999999999864 3 3456789999998 799999999999999999999
Q ss_pred cHhhHHHhhhhhccccccccccHHHHHHHHHH
Q 013723 99 NVVAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (437)
Q Consensus 99 NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~ 130 (437)
|+..|+.||++|||++ |++.|++||.
T Consensus 119 ~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 119 TIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999995 8999999974
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.84 E-value=6.8e-22 Score=170.43 Aligned_cols=94 Identities=21% Similarity=0.179 Sum_probs=85.6
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccHh
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNVV 101 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV~ 101 (437)
.|.+|.+|||+|.|||++|++||.|||++|+||++ ....|+|++++ +++|+.+++|+|||++.++.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36789999999999999999999999999999985 23578999998 799999999999999999999999
Q ss_pred hHHHhhhhhccccccccccHHHHHHHHHHh
Q 013723 102 AARCAAEYLEMTEDVDKKNLIFKLEVFLNS 131 (437)
Q Consensus 102 ~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~ 131 (437)
.++.||++|||+. |++.|++++.+
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999995 89999999875
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.84 E-value=4.4e-22 Score=171.96 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=89.6
Q ss_pred eeeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceee-cCCCCCHHHHHHHHHHhhCceEEEeccc
Q 013723 21 RYVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNI-VDFPGGPKAFEICAKFCYGMTVTFSAYN 99 (437)
Q Consensus 21 ~~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L-~~~pgg~~~fe~~~~FcYt~~i~it~~N 99 (437)
.++.+|.+|||+|.|+|++|++||.||+++|+||++||++.... ...|.+ .+++ +++|+.+++|+|||++.++.+|
T Consensus 22 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e-~~~i~l~~~v~--~~~f~~lL~~iYtg~~~i~~~~ 98 (124)
T 2ihc_A 22 DQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG-ELNITLPEEVT--VKGFEPLIQFAYTAKLILSKEN 98 (124)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHHSEEEEETTT
T ss_pred HHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC-CceEeecCCcC--HHHHHHHHHHhcCCCcccCHHH
Confidence 37889999999999999999999999999999999999975321 257888 4787 7999999999999999999999
Q ss_pred HhhHHHhhhhhccccccccccHHHHHHHHHH
Q 013723 100 VVAARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (437)
Q Consensus 100 V~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~ 130 (437)
|..++.||++|||++ |++.|++||.
T Consensus 99 v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 99 VDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred HHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999996 7788999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.81 E-value=1.5e-20 Score=185.93 Aligned_cols=131 Identities=19% Similarity=0.170 Sum_probs=113.8
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCC-CcCCCCceeecCCCCCHHHHHHHHHHhhCceEEEecccH
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-SEENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSAYNV 100 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~~NV 100 (437)
++.++.+|||+|.|+|++|++||.+||++|+||++||.+. .|....+|+|++++ +++|+.+++|+||+++.++.+|+
T Consensus 168 l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~ 245 (312)
T 3hqi_A 168 LWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMA 245 (312)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHH
T ss_pred HHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHH
Confidence 5678899999999999999999999999999999999975 66677899999998 89999999999999999999999
Q ss_pred hhHHHhhhhhccccccccccHHHHHHHHHHhhhccchhhHHHHHhhccchHhhhHhhc---hhhhHHHHHHh
Q 013723 101 VAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLK---IIGRSVDSIAS 169 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~~sw~~~i~~l~~c~~l~~~Ae~~~---iv~rc~~sLa~ 169 (437)
..|+.||++++|+. |+..|++||.+.+. ..||..++.+|+.|+ |.++|++-|+.
T Consensus 246 ~~ll~~A~~~~~~~------l~~~c~~~l~~~~~---------~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 246 DDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHHTTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHH------HHHHHHHHHHccCC---------HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999995 89999999999883 568999999999985 55555555543
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.78 E-value=6.1e-20 Score=157.08 Aligned_cols=87 Identities=18% Similarity=0.163 Sum_probs=82.2
Q ss_pred eeccCcceeEEEEECCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCceE-EEecccH
Q 013723 22 YVTSELATDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMTV-TFSAYNV 100 (437)
Q Consensus 22 ~~~~~~~~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i-~it~~NV 100 (437)
++.++.+|||+|.|||+.|++||.+|+++|+||++||.+. ...|+|++++ +++|+.+++|+|||++ .++.+|+
T Consensus 25 ~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~ 98 (116)
T 3fkc_A 25 QRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLL 98 (116)
T ss_dssp HHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHH
T ss_pred HHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHH
Confidence 7789999999999999999999999999999999999875 4689999998 8999999999999999 7999999
Q ss_pred hhHHHhhhhhcccc
Q 013723 101 VAARCAAEYLEMTE 114 (437)
Q Consensus 101 ~~l~~AA~~Lqm~e 114 (437)
..++.||++|||+.
T Consensus 99 ~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 99 DELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhCccc
Confidence 99999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.48 E-value=1.8e-14 Score=130.07 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=82.4
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcC-C-C-cCCCCceeecCCCCCHHHHHHHHHHhhCce--------------
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLK-A-S-EENSDEMNIVDFPGGPKAFEICAKFCYGMT-------------- 92 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~-~-~-e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~-------------- 92 (437)
|+|+. +|+.|.+||.+ |++|+|||+||.. + . +.....|.|++++ +.+++.|++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77775 89999999999 9999999999987 3 3 4555789999998 699999999999887
Q ss_pred ------------EEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhhc
Q 013723 93 ------------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (437)
Q Consensus 93 ------------i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~ 134 (437)
+.++.+|+..|+.||.||||.. |++.|+.|+..++.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 7899999999999999999995 99999999999884
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.32 E-value=1.6e-12 Score=107.87 Aligned_cols=79 Identities=13% Similarity=0.226 Sum_probs=65.9
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcC--C-CcCCCCceeecCCCCCHHHHHHHHHHhh-----C---ceEE---E
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLK--A-SEENSDEMNIVDFPGGPKAFEICAKFCY-----G---MTVT---F 95 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~--~-~e~~~~~v~L~~~pgg~~~fe~~~~FcY-----t---~~i~---i 95 (437)
|+|+- +|++|.+||.+ |++|+|||+||+. . .|.....|.|++++ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55654 78999999999 9999999999986 2 44556789999998 699999999999 5 6777 9
Q ss_pred ecccHhhHHHhhhhhcc
Q 013723 96 SAYNVVAARCAAEYLEM 112 (437)
Q Consensus 96 t~~NV~~l~~AA~~Lqm 112 (437)
+++|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999983
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.19 E-value=1.5e-11 Score=108.87 Aligned_cols=92 Identities=11% Similarity=0.115 Sum_probs=81.5
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCce-----------------
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT----------------- 92 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~----------------- 92 (437)
|+|+. +|+.|.+|+.+ |.+|+|||.||.... ...|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 88999999998 899999999998632 3579999998 699999999999754
Q ss_pred ---------EEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhhc
Q 013723 93 ---------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (437)
Q Consensus 93 ---------i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~ 134 (437)
+.++.+++..|+.||.||+|.. |++.||+|+...+.
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 6788999999999999999995 99999999999884
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.04 E-value=3e-11 Score=109.14 Aligned_cols=93 Identities=12% Similarity=0.179 Sum_probs=51.8
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCce-----------------
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT----------------- 92 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~----------------- 92 (437)
|+|+. +|+.|.+|+.+ |.+|+||+.||.... ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66765 89999999998 899999999998642 23479999998 699999999999875
Q ss_pred ----------EEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhhc
Q 013723 93 ----------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSIF 134 (437)
Q Consensus 93 ----------i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l~ 134 (437)
+.++..++..|+.||.||+|.. |++.||.|+...+.
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIK 126 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 5788999999999999999995 99999999999884
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.53 E-value=9.7e-08 Score=79.43 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=66.5
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcCCCcCCCCceeecCCCCCHHHHHHHHHHhhCce--------------EEE
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASEENSDEMNIVDFPGGPKAFEICAKFCYGMT--------------VTF 95 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~--------------i~i 95 (437)
|+|+- +|+.|.+|+.+ |..|+++|.|+..+.+.....|.|++++ +.+++.|++|||.-+ ..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 67776 89999999996 8999999999987434444689999998 699999999999632 357
Q ss_pred ecccHhhHHHhhhhhcc
Q 013723 96 SAYNVVAARCAAEYLEM 112 (437)
Q Consensus 96 t~~NV~~l~~AA~~Lqm 112 (437)
..+++..|+.||.||++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77889999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.48 E-value=1.1e-07 Score=78.59 Aligned_cols=79 Identities=13% Similarity=0.200 Sum_probs=64.2
Q ss_pred EEEEE-CCEEEEecCceeccCCHHHHHhhcCC---CcCCCCceeecCCCCCHHHHHHHHHHhhCce-----------EEE
Q 013723 31 VIINV-GEVKFYLHKFPLLSKSNRLHRLVLKA---SEENSDEMNIVDFPGGPKAFEICAKFCYGMT-----------VTF 95 (437)
Q Consensus 31 V~i~v-~~~~F~~HK~vLas~S~yfr~lf~~~---~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~-----------i~i 95 (437)
|+++- +|+.|.+|+.+ |..|++++.|+... .|.....|.|++++ +.+++.+++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56666 89999999996 89999999999863 24444689999998 699999999999632 357
Q ss_pred ecccHhhHHHhhhhhcc
Q 013723 96 SAYNVVAARCAAEYLEM 112 (437)
Q Consensus 96 t~~NV~~l~~AA~~Lqm 112 (437)
..+.+..|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88899999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.39 E-value=2.8e-07 Score=83.85 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=76.4
Q ss_pred eEEEEE-CCEEEEecCceeccCCHHHHHhhcCCCc-----CCCCceeecCCCCCHHHHHHHHHHhhCce-----------
Q 013723 30 DVIINV-GEVKFYLHKFPLLSKSNRLHRLVLKASE-----ENSDEMNIVDFPGGPKAFEICAKFCYGMT----------- 92 (437)
Q Consensus 30 DV~i~v-~~~~F~~HK~vLas~S~yfr~lf~~~~e-----~~~~~v~L~~~pgg~~~fe~~~~FcYt~~----------- 92 (437)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++++ +.+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 467765 88999999997 8889999999986321 223679999998 699999999998532
Q ss_pred --------------EEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhh
Q 013723 93 --------------VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (437)
Q Consensus 93 --------------i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l 133 (437)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 3466678899999999999995 9999999998876
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.86 E-value=9.6e-06 Score=68.87 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=63.1
Q ss_pred EEEE-ECCEEEEecCceeccCCHHHHHhhcCC---CcCCCCceeecCCCCCHHHHHHHHHHhhCce-----------EEE
Q 013723 31 VIIN-VGEVKFYLHKFPLLSKSNRLHRLVLKA---SEENSDEMNIVDFPGGPKAFEICAKFCYGMT-----------VTF 95 (437)
Q Consensus 31 V~i~-v~~~~F~~HK~vLas~S~yfr~lf~~~---~e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~-----------i~i 95 (437)
|+|+ .+|+.|.+++. .|..|+.++.|+... .+.....|.|++++ +.+++.|++|||--+ ..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 6676 48999999999 578999999999863 23334589999998 699999999998532 357
Q ss_pred ecccHhhHHHhhhhhcc
Q 013723 96 SAYNVVAARCAAEYLEM 112 (437)
Q Consensus 96 t~~NV~~l~~AA~~Lqm 112 (437)
..+++..|+.||.||++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 78899999999999986
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.60 E-value=0.00014 Score=61.01 Aligned_cols=92 Identities=20% Similarity=0.195 Sum_probs=70.5
Q ss_pred eEEEEECCEEEEecCceeccCC-HHHHHhhcCCCc----C-CCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhh
Q 013723 30 DVIINVGEVKFYLHKFPLLSKS-NRLHRLVLKASE----E-NSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVA 102 (437)
Q Consensus 30 DV~i~v~~~~F~~HK~vLas~S-~yfr~lf~~~~e----~-~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~ 102 (437)
=|+|.|||+.|...+..|.... .+|.+||....+ . ...++-+ |- .|+.|+.|++|..+|++.+.. -....
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 3788999999999999999885 578999975311 1 2234444 33 479999999999999988743 24567
Q ss_pred HHHhhhhhccccccccccHHHHHHHHHH
Q 013723 103 ARCAAEYLEMTEDVDKKNLIFKLEVFLN 130 (437)
Q Consensus 103 l~~AA~~Lqm~e~~~~~nL~~~c~~FL~ 130 (437)
++..|+|+++++ |++.|++-+.
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHh
Confidence 999999999996 7888876544
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.57 E-value=0.00044 Score=57.42 Aligned_cols=89 Identities=7% Similarity=-0.022 Sum_probs=59.9
Q ss_pred HhhccchHhhhHhhchhhhHHHHHHhhcccCCCCccccccccCCCCCCcccccccccccccccCCCcchhhhcccCCHHH
Q 013723 144 LQTTKSLLPWSEDLKIIGRSVDSIASKTSVDPANVTWSYTYNRKLSAPDRIVEEGVFGERIESVPKDWWVEDICELDIDL 223 (437)
Q Consensus 144 l~~c~~l~~~Ae~~~iv~rc~~sLa~ka~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~~~ 223 (437)
..||.+++.+|+.|++ ..|..+|. .|. ..+| ......++|..||.+.
T Consensus 10 ~~NCl~i~~~A~~~~~-----~~L~~~a~--------~fi--~~nF------------------~~v~~~~eFl~L~~~~ 56 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSD-----PELYTAAK--------HCA--KTHL------------------AQLQNTEEFLHLPHRL 56 (105)
T ss_dssp TTTHHHHHHHHHHTTC-----HHHHHHHH--------HHH--HHTC------------------HHHHTSHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHHH--------HHH--HHHH------------------HHHHhcccHhhCCHHH
Confidence 5699999999999984 56665553 111 1122 0112258999999999
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHH
Q 013723 224 YKRVMIAVKSKGRMDGSVIGEALRIYAVRWLPDSIDALVSDAQTLRNKCLVETIV 278 (437)
Q Consensus 224 ~~rvi~am~~~g~~~~e~I~~al~~Ya~~~l~~~~~~~~~~~~~~~~r~llE~Iv 278 (437)
+..+|.. . +.+|+.|++|+++|+++.... +......|++.|+
T Consensus 57 L~~lL~s---d-v~~E~~vf~av~~Wv~~d~~~---------R~~~~~~Ll~~VR 98 (105)
T 2eqx_A 57 LTDIISD---G-VPCSQNPTEAIEAWINFNKEE---------REAFAESLRTSLK 98 (105)
T ss_dssp HHHHHHT---C-EETTSCHHHHHHHHHHTTHHH---------HHHHHHHHHHHCC
T ss_pred HHHHHcC---C-CCCHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHH
Confidence 7777765 3 468889999999999876531 1223347777763
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.99 E-value=0.011 Score=55.06 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=70.3
Q ss_pred EEEEECCEEEEecCceeccCC-HHHHHhhcCCCc-----CCCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhhH
Q 013723 31 VIINVGEVKFYLHKFPLLSKS-NRLHRLVLKASE-----ENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAA 103 (437)
Q Consensus 31 V~i~v~~~~F~~HK~vLas~S-~yfr~lf~~~~e-----~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~l 103 (437)
|+|.|||..|...+..|.... .+|.+||....+ ....++-+. - .|..|+.|++|.-+|++.+.. -....+
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 678999999999999998874 488999875311 122344442 2 358999999999999998743 234679
Q ss_pred HHhhhhhccccccccccHHHHHHHHHHhh
Q 013723 104 RCAAEYLEMTEDVDKKNLIFKLEVFLNSS 132 (437)
Q Consensus 104 ~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~ 132 (437)
+.-|+|+++++ |++.|.+-+.+.
T Consensus 91 ~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 91 LEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHCCcHH------HHHHHHHHHHHH
Confidence 99999999985 788888777643
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.17 E-value=0.0057 Score=51.89 Aligned_cols=82 Identities=20% Similarity=0.195 Sum_probs=61.5
Q ss_pred EEEEECCEEEEecCceeccCC-HHHHHhhcCCC--cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhhHHHh
Q 013723 31 VIINVGEVKFYLHKFPLLSKS-NRLHRLVLKAS--EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAARCA 106 (437)
Q Consensus 31 V~i~v~~~~F~~HK~vLas~S-~yfr~lf~~~~--e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~l~~A 106 (437)
|+|.|||+.|...+..|.... ..|.+||.... .....++-+. -.|..|+.|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 789999999999999988763 34566766421 1223455543 2358999999999999988754 356889999
Q ss_pred hhhhccccc
Q 013723 107 AEYLEMTED 115 (437)
Q Consensus 107 A~~Lqm~e~ 115 (437)
|+|+++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999984
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.03 E-value=0.037 Score=47.45 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=56.9
Q ss_pred eEEEEECCEEEEecCceeccCCHHHHHhhcCC-C----cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhhH
Q 013723 30 DVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAA 103 (437)
Q Consensus 30 DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~----e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~l 103 (437)
=|+|.|||+.|..-+..|...-+- |+... + .....++-+ +-.|+.|+.|++|.-+|++.+.. ..+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 378899999999998888654321 23221 1 112234444 23479999999999999988644 346889
Q ss_pred HHhhhhhccccc
Q 013723 104 RCAAEYLEMTED 115 (437)
Q Consensus 104 ~~AA~~Lqm~e~ 115 (437)
+.-|+|+++++.
T Consensus 88 ~~Ea~fy~i~~l 99 (124)
T 1s1g_A 88 DDELAFYGILPE 99 (124)
T ss_dssp HHHHHHTTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999974
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=93.04 E-value=0.064 Score=44.25 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=57.2
Q ss_pred EEEEECCEEEEecCceeccCC-HHHHHhhcCC--CcCCCCceeecCCCCCHHHHHHHHHHhhC-ceEEEec-ccHhhHHH
Q 013723 31 VIINVGEVKFYLHKFPLLSKS-NRLHRLVLKA--SEENSDEMNIVDFPGGPKAFEICAKFCYG-MTVTFSA-YNVVAARC 105 (437)
Q Consensus 31 V~i~v~~~~F~~HK~vLas~S-~yfr~lf~~~--~e~~~~~v~L~~~pgg~~~fe~~~~FcYt-~~i~it~-~NV~~l~~ 105 (437)
|+|.|||+.|...+..|...- ..+.+|+... -.....++-+. -.|+.|+.|++|.-+ |++.+.+ -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD---Rdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD---RNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC---SCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc---CChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999998886542 1333444321 11223455553 235899999999998 8987643 34677999
Q ss_pred hhhhhccccc
Q 013723 106 AAEYLEMTED 115 (437)
Q Consensus 106 AA~~Lqm~e~ 115 (437)
-|+|+++++.
T Consensus 80 Ea~fy~i~~~ 89 (100)
T 1t1d_A 80 EIKFYELGEN 89 (100)
T ss_dssp HHHHTTCCHH
T ss_pred HHHHcCCCHH
Confidence 9999999973
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=92.10 E-value=0.052 Score=47.56 Aligned_cols=81 Identities=14% Similarity=0.200 Sum_probs=57.7
Q ss_pred eeEEEEECCEEEEecCceeccCCHHHHHhhcCC-C----cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhh
Q 013723 29 TDVIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVA 102 (437)
Q Consensus 29 ~DV~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~----e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~ 102 (437)
.=|+|.|||+.|...+..|...-+ .|+... + .....++-+. -.|+.|+.|++|.-+|++.+.. ..+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 447889999999999888865432 133321 1 1122344442 3479999999999999988643 34788
Q ss_pred HHHhhhhhccccc
Q 013723 103 ARCAAEYLEMTED 115 (437)
Q Consensus 103 l~~AA~~Lqm~e~ 115 (437)
++.-|+|+++++.
T Consensus 109 l~eEa~fy~i~~l 121 (140)
T 2nz0_B 109 YDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999974
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.09 E-value=0.062 Score=44.62 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=56.0
Q ss_pred EEEEECCEEEEecCceeccCCHHHHHhhcCC-C----cCCCCceeecCCCCCHHHHHHHHHHhhCceEEEec-ccHhhHH
Q 013723 31 VIINVGEVKFYLHKFPLLSKSNRLHRLVLKA-S----EENSDEMNIVDFPGGPKAFEICAKFCYGMTVTFSA-YNVVAAR 104 (437)
Q Consensus 31 V~i~v~~~~F~~HK~vLas~S~yfr~lf~~~-~----e~~~~~v~L~~~pgg~~~fe~~~~FcYt~~i~it~-~NV~~l~ 104 (437)
|+|.|||+.|...+..|....+- |+... + .....++-+. -.|+.|+.|++|.-+|++.+.+ .++..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiD---Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFD---RDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEEC---SCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEe---CCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999998887654321 23321 1 1122344443 2358999999999999987644 3478899
Q ss_pred Hhhhhhccccc
Q 013723 105 CAAEYLEMTED 115 (437)
Q Consensus 105 ~AA~~Lqm~e~ 115 (437)
.-|+|+++++.
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999974
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=73.80 E-value=0.94 Score=27.95 Aligned_cols=17 Identities=41% Similarity=0.446 Sum_probs=14.4
Q ss_pred ccHhhHHHhhhhhcccc
Q 013723 98 YNVVAARCAAEYLEMTE 114 (437)
Q Consensus 98 ~NV~~l~~AA~~Lqm~e 114 (437)
.||+.|+.||+||+=.|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998543
No 38
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=52.06 E-value=11 Score=39.34 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=55.5
Q ss_pred eEEEEECCEEEEecCceeccCCHH-HHHhhcCC--CcCCCCceeecCCCCCHHHHHHHHHHhhC-ceEEEec-ccHhhHH
Q 013723 30 DVIINVGEVKFYLHKFPLLSKSNR-LHRLVLKA--SEENSDEMNIVDFPGGPKAFEICAKFCYG-MTVTFSA-YNVVAAR 104 (437)
Q Consensus 30 DV~i~v~~~~F~~HK~vLas~S~y-fr~lf~~~--~e~~~~~v~L~~~pgg~~~fe~~~~FcYt-~~i~it~-~NV~~l~ 104 (437)
=|+|.|||+.|...+.-|...-+- +-+++... -+.+..++-+ +-.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 467899999999998877644211 11122211 1122344554 3347999999999999 9987643 2456789
Q ss_pred Hhhhhhccccc
Q 013723 105 CAAEYLEMTED 115 (437)
Q Consensus 105 ~AA~~Lqm~e~ 115 (437)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 99999999974
No 39
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=46.38 E-value=22 Score=27.94 Aligned_cols=43 Identities=14% Similarity=0.256 Sum_probs=33.3
Q ss_pred CccccHHHHHHHHHHHHhccCCCCcCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHhhh
Q 013723 339 TACYDVELVQCIVNEYLMHEKPSRALGDVGWNEKGPDDFVLGHGSLLAVGKLINGYLAEI 398 (437)
Q Consensus 339 ~~~yDvd~V~riv~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 398 (437)
+..++.+++.||+..+...... ..+..++..+++++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt-----------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT-----------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC-----------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc-----------------cccHHHHHHHHHHHHHHHHHH
Confidence 4578899999999987654321 235689999999999999883
No 40
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.23 E-value=22 Score=28.52 Aligned_cols=35 Identities=11% Similarity=0.001 Sum_probs=30.9
Q ss_pred EEEecccHhhHHHhhhhhccccccccccHHHHHHHHHHhhh
Q 013723 93 VTFSAYNVVAARCAAEYLEMTEDVDKKNLIFKLEVFLNSSI 133 (437)
Q Consensus 93 i~it~~NV~~l~~AA~~Lqm~e~~~~~nL~~~c~~FL~~~l 133 (437)
=.++++|...++..|+.++.++ |.++|.+|+.++.
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 3578999999999999999885 8999999998766
No 41
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=32.19 E-value=33 Score=27.11 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=32.9
Q ss_pred CccccHHHHHHHHHHHHhccCCCCcCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHhhh
Q 013723 339 TACYDVELVQCIVNEYLMHEKPSRALGDVGWNEKGPDDFVLGHGSLLAVGKLINGYLAEI 398 (437)
Q Consensus 339 ~~~yDvd~V~riv~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 398 (437)
+..+..+++.||+..+..... +..+..++..+++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~k-----------------TkIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDK-----------------TKVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTT-----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCC-----------------ccccHHHHHHHHHHHHHHHHHH
Confidence 557889999999996665432 1235689999999999999883
No 42
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=22.13 E-value=38 Score=27.32 Aligned_cols=24 Identities=29% Similarity=0.661 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCCChhh
Q 013723 384 LLAVGKLINGYLAEIAHDPNLTLAS 408 (437)
Q Consensus 384 ~~~VakLvD~YLaEiA~D~~L~~~k 408 (437)
-.+.|.-| ++|-||+.|||+|+..
T Consensus 55 ~vRAAtAI-s~LDeISnDPNmP~ht 78 (94)
T 2qzg_A 55 IVRSATAI-QYLDDISEDPNMPIHT 78 (94)
T ss_dssp HHHHHHHH-HHHHHHTTCTTCCHHH
T ss_pred hHHHHHHH-HHHHHhhcCCCCChHH
Confidence 35555555 6899999999999864
No 43
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=22.01 E-value=35 Score=27.26 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCChhh
Q 013723 384 LLAVGKLINGYLAEIAHDPNLTLAS 408 (437)
Q Consensus 384 ~~~VakLvD~YLaEiA~D~~L~~~k 408 (437)
-.+-|.-| ++|-||+.|||+|+..
T Consensus 51 ~vRAA~aI-s~LDeISnDPNmP~h~ 74 (89)
T 2qsb_A 51 DLRCATVL-SMLDEMANDPNVPAHG 74 (89)
T ss_dssp HHHHHHHH-HHHHHHHTCTTSCHHH
T ss_pred hHHHHHHH-HHHHHhhcCCCCChHH
Confidence 34555544 6899999999999864
Done!