Query 013724
Match_columns 437
No_of_seqs 461 out of 3476
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 15:56:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013724.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013724hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fyva_ c.23.2.1 (A:) Toll-lik 99.5 1.1E-14 8.3E-19 126.8 6.6 94 115-210 10-110 (161)
2 d1p9ag_ c.10.2.7 (G:) von Will 99.5 1.5E-13 1.1E-17 128.8 14.1 145 245-396 56-204 (266)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 2.3E-14 1.7E-18 137.3 7.3 135 246-380 52-191 (313)
4 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 1.3E-13 9.3E-18 120.1 9.0 126 267-396 15-148 (162)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.4 9.1E-13 6.6E-17 123.4 15.5 177 245-428 32-210 (266)
6 d1fyxa_ c.23.2.1 (A:) Toll-lik 99.4 3.3E-14 2.4E-18 122.2 4.9 95 115-211 3-106 (149)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 2E-13 1.5E-17 130.6 8.9 86 335-424 217-302 (313)
8 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 1.6E-12 1.2E-16 117.5 12.4 142 245-397 47-188 (210)
9 d2omxa2 c.10.2.1 (A:37-235) In 99.3 3E-12 2.2E-16 114.7 12.7 143 245-398 41-183 (199)
10 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.4E-12 1E-16 108.2 9.6 99 273-375 1-102 (124)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.3 8.6E-12 6.2E-16 117.5 15.5 158 268-428 78-240 (284)
12 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 6.4E-12 4.7E-16 113.4 13.6 139 245-394 69-207 (210)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.3 5.8E-12 4.2E-16 118.7 13.2 132 264-396 99-234 (284)
14 d2omxa2 c.10.2.1 (A:37-235) In 99.3 1.2E-11 8.4E-16 110.7 14.1 159 267-436 37-196 (199)
15 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 9.1E-12 6.6E-16 110.8 12.4 108 270-378 29-141 (192)
16 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 1.2E-11 9E-16 109.9 12.3 122 273-397 11-136 (192)
17 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.4E-11 1E-15 102.1 11.0 99 296-398 1-101 (124)
18 d1xkua_ c.10.2.7 (A:) Decorin 99.2 9.1E-11 6.6E-15 111.2 16.6 174 245-426 32-255 (305)
19 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 5.9E-12 4.3E-16 109.3 6.1 121 246-371 20-147 (162)
20 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 4.1E-11 3E-15 109.0 12.1 126 267-398 60-206 (227)
21 d2omza2 c.10.2.1 (A:33-416) In 99.2 4E-11 2.9E-15 116.5 12.1 143 245-398 220-362 (384)
22 d1xkua_ c.10.2.7 (A:) Decorin 99.2 1.9E-10 1.4E-14 108.9 14.9 175 245-426 56-285 (305)
23 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 1.6E-10 1.2E-14 105.0 13.8 140 245-394 64-224 (227)
24 d2omza2 c.10.2.1 (A:33-416) In 99.1 2.7E-10 2E-14 110.5 13.6 159 267-436 216-375 (384)
25 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 2.1E-10 1.5E-14 98.7 10.4 104 271-376 9-116 (156)
26 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 8E-13 5.8E-17 118.7 -5.9 125 265-394 43-181 (198)
27 d2astb2 c.10.1.3 (B:2136-2419) 98.9 1.8E-11 1.3E-15 115.6 -2.3 152 244-397 71-235 (284)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.9 2.2E-09 1.6E-13 97.8 11.2 149 246-397 31-211 (242)
29 d1m9la_ c.10.3.1 (A:) Outer ar 98.9 2.5E-11 1.8E-15 108.8 -4.5 113 283-399 37-152 (198)
30 d2astb2 c.10.1.3 (B:2136-2419) 98.8 2.9E-10 2.1E-14 107.1 2.0 146 245-390 96-252 (284)
31 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 8.6E-09 6.3E-13 88.2 9.1 88 264-351 25-115 (156)
32 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.7 1.4E-08 9.9E-13 92.4 9.0 126 266-394 99-232 (242)
33 d1jl5a_ c.10.2.6 (A:) Leucine 98.6 1.3E-07 9.3E-12 89.5 11.0 135 244-397 38-172 (353)
34 d1jl5a_ c.10.2.6 (A:) Leucine 98.4 5.2E-07 3.8E-11 85.2 11.4 105 270-386 38-142 (353)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.8 1.4E-06 1E-10 85.0 0.9 102 271-374 3-123 (460)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.7 3.2E-06 2.3E-10 80.5 1.6 183 245-428 94-317 (344)
37 d1koha1 c.10.2.3 (A:201-362) m 97.7 3.9E-06 2.8E-10 71.5 2.0 79 314-393 63-152 (162)
38 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.6 5.5E-06 4E-10 80.5 1.5 105 293-398 2-123 (460)
39 d1koha1 c.10.2.3 (A:201-362) m 97.6 8.9E-06 6.5E-10 69.2 1.8 79 291-369 63-152 (162)
40 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.5 1.9E-05 1.4E-09 74.9 2.9 126 269-396 157-311 (344)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.9 0.00011 7.7E-09 62.6 1.5 82 269-350 14-111 (167)
42 d1pgva_ c.10.1.1 (A:) Tropomod 96.9 0.00029 2.1E-08 59.7 4.2 105 291-396 13-140 (167)
43 d1io0a_ c.10.1.1 (A:) Tropomod 96.1 0.0018 1.3E-07 54.3 3.8 10 270-279 17-26 (166)
44 d1io0a_ c.10.1.1 (A:) Tropomod 96.0 0.00072 5.2E-08 56.9 0.8 106 291-396 15-141 (166)
45 d1wu7a1 c.51.1.1 (A:330-426) H 70.2 3.4 0.00025 30.1 5.4 59 117-176 3-62 (97)
46 d1pd3a_ a.30.3.1 (A:) Nonstruc 63.0 1.4 0.0001 27.8 1.4 16 22-37 11-26 (54)
47 d1qf6a1 c.51.1.1 (A:533-642) T 46.2 17 0.0012 26.7 5.6 60 117-177 7-67 (110)
48 d1kmma1 c.51.1.1 (A:326-424) H 43.3 20 0.0015 25.6 5.6 57 116-173 2-62 (99)
49 d1nyra1 c.51.1.1 (A:533-645) T 40.4 16 0.0011 27.0 4.6 61 117-177 13-74 (113)
50 d1i7qb_ c.23.16.1 (B:) Anthran 37.3 38 0.0028 27.2 7.0 48 131-178 10-57 (192)
51 d1qe0a1 c.51.1.1 (A:326-420) H 35.7 22 0.0016 25.1 4.6 59 117-176 4-63 (95)
52 d1a9xa2 c.24.1.1 (A:936-1073) 34.4 22 0.0016 27.5 4.7 33 116-150 6-38 (138)
53 d1h4vb1 c.51.1.1 (B:326-421) H 24.7 57 0.0042 22.7 5.3 56 116-173 2-59 (96)
54 d1u3da2 c.28.1.1 (A:13-197) Cr 21.6 1.4E+02 0.0099 23.3 7.8 88 135-226 56-147 (185)
55 d1owla2 c.28.1.1 (A:3-204) DNA 20.9 1.6E+02 0.011 23.3 8.1 97 129-228 48-150 (202)
No 1
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.1e-14 Score=126.83 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=83.4
Q ss_pred CCCCceeeccCCCcccCchH-HHHHHHHhcCCceEEe-----cCCCchHHHHHHHHHhcceEEEEecCccccccccHhhH
Q 013724 115 DSYEGVPTAIPSEDTRDNFT-SHLYSALSQKSIETFI-----NRGDEISQSLVDAIEASAISLIIFSEGYASSRWFFDKL 188 (437)
Q Consensus 115 ~~~~dvf~sf~g~d~r~~f~-~~l~~~L~~~g~~~~~-----~~g~~i~~~l~~~i~~S~~~i~i~S~~~~sS~Wcl~EL 188 (437)
.++|||||||+++|. .|+ ..|...|+..|+++|+ ..|+.+.++|.++|++|+..|+|+|++|..|.||..|+
T Consensus 10 ~~~yDvFisys~~D~--~~v~~~L~~~Le~~g~~v~~d~~d~~~G~~~~~~i~~~i~~s~~~i~vlS~~~~~s~w~~~E~ 87 (161)
T d1fyva_ 10 NLQFHAFISYSGHDS--FWVKNELLPNLEKEGMQICLHERNFVPGKSIVENIITCIEKSYKSIFVLSPNFVQSEWCHYEL 87 (161)
T ss_dssp CCCEEEEEECCGGGH--HHHHHTHHHHHHTTTCCEECTTTTCCTTSCHHHHHHHHHHHEEEEEEEESHHHHHHTSHHHHH
T ss_pred CCeeEEEEecChhHH--HHHHHHHHHHHHhCCCcceEeccccccccccHHHHHHHHHhCCEEEEEecCccccChHHHHHH
Confidence 468999999999998 455 6799999999999999 57999999999999999999999999999999999999
Q ss_pred Hhhhhhc-cccCeEEEeeeecCC
Q 013724 189 VKILQCK-RVYGQIVLPVFYGVD 210 (437)
Q Consensus 189 ~~il~c~-~~~~~~vlPiFy~Vd 210 (437)
...+... ..+...++||+++--
T Consensus 88 ~~a~~~~~~~~~~~lIpV~l~~~ 110 (161)
T d1fyva_ 88 YFAHHNLFHEGSNSLILILLEPI 110 (161)
T ss_dssp HTTSCCCSCSSCSSEEEEESSCC
T ss_pred HHHHHHHHHcCCCceeEEEEecC
Confidence 9888765 345568999998643
No 2
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.5e-13 Score=128.81 Aligned_cols=145 Identities=23% Similarity=0.252 Sum_probs=109.3
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccC-CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEE
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMF 322 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~ 322 (437)
.|++|+|++|.... .+ .+..+++|+.|+|++|. +..++..+ .+++|+.|++++|......+. +..+.+|+.|+
T Consensus 56 ~L~~L~L~~N~l~~-l~---~~~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~ 130 (266)
T d1p9ag_ 56 RLTQLNLDRAELTK-LQ---VDGTLPVLGTLDLSHNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (266)
T ss_dssp TCCEEECTTSCCCE-EE---CCSCCTTCCEEECCSSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred cccccccccccccc-cc---ccccccccccccccccc-ccccccccccccccccccccccccceeecccccccccccccc
Confidence 47778887775432 22 13457888888888887 55666666 788888888888765554444 67788888888
Q ss_pred eeCCCCcccChh-hcCCCCCCEEeccCCCCCCCCc-cccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeeccc
Q 013724 323 LNGTAIEELPSS-IECLYKLLHLDLEDCKSLKSLP-SGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIY 396 (437)
Q Consensus 323 Ls~n~l~~lp~~-i~~L~~L~~L~L~~n~~l~~LP-~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~ 396 (437)
+++|.+..+|.. +..+++|+.|++++|+ +..+| ..+..+++|++|+|++|. +..+|..+..+.+|+.|++.+
T Consensus 131 l~~n~l~~l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-L~~lp~~~~~~~~L~~L~L~~ 204 (266)
T d1p9ag_ 131 LKGNELKTLPPGLLTPTPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENS-LYTIPKGFFGSHLLPFAFLHG 204 (266)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSC-CSCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCCCSEEECCS
T ss_pred ccccccceeccccccccccchhccccccc-ccccCccccccccccceeecccCC-CcccChhHCCCCCCCEEEecC
Confidence 888888877654 4668899999999988 55554 557889999999999876 558998888899999988864
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.46 E-value=2.3e-14 Score=137.27 Aligned_cols=135 Identities=19% Similarity=0.283 Sum_probs=97.0
Q ss_pred hhhhhcccCcccCCCCCCccccccCceEEEeccC-CCCCCCcCccC-CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEE
Q 013724 246 LKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRD-CKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMF 322 (437)
Q Consensus 246 L~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~-n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~ 322 (437)
++.|+|++++..+....|..++++++|++|+|++ |.+.+.+|..+ .|++|++|+|++|.+.+..+. +..+.+|+.++
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~ 131 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccc
Confidence 5667777776665545556677788888888876 55566788777 888888888888876665555 77778888888
Q ss_pred eeCCCCc-ccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCC-CEEeeeCCCCCCccc
Q 013724 323 LNGTAIE-ELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSL-KYLTLNGCSILQRLN 380 (437)
Q Consensus 323 Ls~n~l~-~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L-~~L~Ls~c~~l~~lP 380 (437)
++.|.+. .+|..++.++.|+.+++++|...+.+|..+..+..+ +.+++++|...+..|
T Consensus 132 l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~ 191 (313)
T d1ogqa_ 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECC
T ss_pred cccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccc
Confidence 8887766 667778888888888888887666777777666665 566666554433333
No 4
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.3e-13 Score=120.08 Aligned_cols=126 Identities=20% Similarity=0.283 Sum_probs=106.1
Q ss_pred cccCceEEEeccCCCCCCCcCccC-CCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhh-cCCCCCCEE
Q 013724 267 QHLNTLVVLNLRDCKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSI-ECLYKLLHL 344 (437)
Q Consensus 267 ~~l~~L~~L~Ls~n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i-~~L~~L~~L 344 (437)
.++.+|++|+|++|+ ++.++... .+++|+.|+|++|. +..++.+..+++|++|++++|.|+.+|+.+ ..+++|+.|
T Consensus 15 ~n~~~lr~L~L~~n~-I~~i~~~~~~l~~L~~L~Ls~N~-i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 15 TNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNE-IRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp ECTTSCEEEECTTSC-CCSCCCGGGGTTCCSEEECCSSC-CCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCcCcCcEEECCCCC-CCccCccccccccCCEEECCCCC-CCccCCcccCcchhhhhcccccccCCCccccccccccccc
Confidence 356789999999998 88888665 89999999999986 456777999999999999999999998764 679999999
Q ss_pred eccCCCCCCCCcc--ccCCCCCCCEEeeeCCCCCCccc----hhccCCCCCceeeccc
Q 013724 345 DLEDCKSLKSLPS--GLCKLKSLKYLTLNGCSILQRLN----FDIWSILPLVLTTFIY 396 (437)
Q Consensus 345 ~L~~n~~l~~LP~--~l~~L~~L~~L~Ls~c~~l~~lP----~~l~~L~~L~~L~~~~ 396 (437)
++++|. +..+++ .+..+++|++|++++|+. ..+| ..+..+++|+.|+...
T Consensus 93 ~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i-~~~~~~r~~~i~~lp~L~~LD~~~ 148 (162)
T d1a9na_ 93 ILTNNS-LVELGDLDPLASLKSLTYLCILRNPV-TNKKHYRLYVIYKVPQVRVLDFQK 148 (162)
T ss_dssp ECCSCC-CCCGGGGGGGGGCTTCCEEECCSSGG-GGSTTHHHHHHHHCTTCSEETTEE
T ss_pred eecccc-ccccccccccccccccchhhcCCCcc-ccccchHHHHHHHCCCcCeeCCCC
Confidence 999998 777764 578999999999999874 4444 3578899999998543
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=9.1e-13 Score=123.40 Aligned_cols=177 Identities=18% Similarity=0.038 Sum_probs=138.4
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEee
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLN 324 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls 324 (437)
.++.|+|++|.... .+ +..+..+++|++|+|++|. ++.+|....+++|+.|+|++|++....+.+..+++|+.|+++
T Consensus 32 ~l~~L~Ls~N~i~~-l~-~~~f~~l~~L~~L~L~~N~-l~~l~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 32 DTTILHLSENLLYT-FS-LATLMPYTRLTQLNLDRAE-LTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TCCEEECTTSCCSE-EE-GGGGTTCTTCCEEECTTSC-CCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECC
T ss_pred CCCEEECcCCcCCC-cC-HHHhhcccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc
Confidence 57888998876543 22 2345678999999999997 777876558899999999998765544448889999999999
Q ss_pred CCCCcccCh-hhcCCCCCCEEeccCCCCCCCCcc-ccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhh
Q 013724 325 GTAIEELPS-SIECLYKLLHLDLEDCKSLKSLPS-GLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFV 402 (437)
Q Consensus 325 ~n~l~~lp~-~i~~L~~L~~L~L~~n~~l~~LP~-~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~ 402 (437)
+|.+..++. .+..+.+|+.|++.+|. +..+|. .+..+++|+.|++++|...+-.+..+..+++|+.|++.++...
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-- 185 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-- 185 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC--
T ss_pred ccccceeeccccccccccccccccccc-cceeccccccccccchhcccccccccccCccccccccccceeecccCCCc--
Confidence 999987654 56788999999999988 666664 4678999999999998766555667899999999998665432
Q ss_pred ccccccCCCcccccccccCCCCCCcc
Q 013724 403 ETSAASGDDWKSAFDAAADGPVKPSQ 428 (437)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~s~~~~~~~ 428 (437)
..+.+......++.+..+++.+.|.
T Consensus 186 -~lp~~~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 186 -TIPKGFFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -ccChhHCCCCCCCEEEecCCCCCCC
Confidence 4455556678889999999988764
No 6
>d1fyxa_ c.23.2.1 (A:) Toll-like receptor 2, TLR2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=3.3e-14 Score=122.21 Aligned_cols=95 Identities=14% Similarity=0.171 Sum_probs=80.7
Q ss_pred CCCCceeeccCCCcccCchH-HHHHHHHhc--CCceEEe-----cCCCchHHHHHHHHHhcceEEEEecCccccccccHh
Q 013724 115 DSYEGVPTAIPSEDTRDNFT-SHLYSALSQ--KSIETFI-----NRGDEISQSLVDAIEASAISLIIFSEGYASSRWFFD 186 (437)
Q Consensus 115 ~~~~dvf~sf~g~d~r~~f~-~~l~~~L~~--~g~~~~~-----~~g~~i~~~l~~~i~~S~~~i~i~S~~~~sS~Wcl~ 186 (437)
+++|||||||+++|. .|+ .+|...|++ .|+++|+ ..|+.+.++|.++|+.|+..|+|+|++|..|.||..
T Consensus 3 ~~~YDvFiSys~~D~--~~V~~~l~~~LE~~~~g~~~~~~~rd~~~G~~~~~~i~~~i~~S~~~i~vlS~~~l~s~wc~~ 80 (149)
T d1fyxa_ 3 NICYDAFVSYSERDA--YWVENLMVQELENFNPPFKLCLHKRDFIHGKWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKY 80 (149)
T ss_dssp SCCEEEEEECCGGGH--HHHHTHHHHHHTTSSSCCCEEEHHHHCCSSSCHHHHHHHHHHHEEEEEEEECHHHHHHHTHHH
T ss_pred CCEEEEEEECchhhH--HHHHHHHHHHHHhcCCCceEEEecccccccchHHHHHHHHHHhCCEEEEEEcCccccccchHH
Confidence 468999999999997 454 578999976 4899998 679999999999999999999999999999999999
Q ss_pred hHHhhhh-hccccCeEEEeeeecCCC
Q 013724 187 KLVKILQ-CKRVYGQIVLPVFYGVDP 211 (437)
Q Consensus 187 EL~~il~-c~~~~~~~vlPiFy~Vdp 211 (437)
|+...+. ..+.++..++||+++..+
T Consensus 81 E~~~a~~~~~~~~~~~iIpV~l~~~~ 106 (149)
T d1fyxa_ 81 ELDFSHFRLFDENNDAAILILLEPIE 106 (149)
T ss_dssp HSCCSCCTTCGGGTTCCEEEESSCCC
T ss_pred HHHHHHHHHHHcCCceEEEEEeccCc
Confidence 9976544 335567789999986443
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.40 E-value=2e-13 Score=130.64 Aligned_cols=86 Identities=12% Similarity=-0.041 Sum_probs=61.9
Q ss_pred hcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccccccCCCccc
Q 013724 335 IECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETSAASGDDWKS 414 (437)
Q Consensus 335 i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~ 414 (437)
++.+++|+.|++.+|...+. +..++.+++|+.|+|++|...+.+|..+++|++|+.|++.++... ...|. ...++.
T Consensus 217 ~~~~~~l~~l~~~~~~l~~~-~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~--g~iP~-~~~L~~ 292 (313)
T d1ogqa_ 217 FGSDKNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC--GEIPQ-GGNLQR 292 (313)
T ss_dssp CCTTSCCSEEECCSSEECCB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE--EECCC-STTGGG
T ss_pred cccccccccccccccccccc-ccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccc--ccCCC-cccCCC
Confidence 34455666777777664333 446788899999999999988899999999999999998775432 23343 345677
Q ss_pred ccccccCCCC
Q 013724 415 AFDAAADGPV 424 (437)
Q Consensus 415 l~~~~~s~~~ 424 (437)
+..+...++.
T Consensus 293 L~~l~l~~N~ 302 (313)
T d1ogqa_ 293 FDVSAYANNK 302 (313)
T ss_dssp SCGGGTCSSS
T ss_pred CCHHHhCCCc
Confidence 7777766664
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=1.6e-12 Score=117.50 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=73.1
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEee
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLN 324 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls 324 (437)
.|+.++++.|...... .+..+++|++|++++|. ++.++....+++|++|++++|. +..+|.+..+++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l~----~l~~l~~L~~L~L~~n~-i~~l~~~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ----GIQYLPNVTKLFLNGNK-LTDIKPLANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCCT----TGGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCch----hHhhCCCCCEEeCCCcc-ccCccccccCcccccccccccc-ccccccccccccccccccc
Confidence 4455555554432211 13445666666666665 4444432355666666666654 3344555556666666666
Q ss_pred CCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccc
Q 013724 325 GTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYV 397 (437)
Q Consensus 325 ~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~ 397 (437)
+|.+..++ .+..+++|+.+++++|. +..++ .+..+++|+.+++++|.. ..++ .+.++++|+.|++.+|
T Consensus 121 ~~~~~~~~-~l~~l~~l~~l~~~~n~-l~~~~-~~~~l~~L~~l~l~~n~l-~~i~-~l~~l~~L~~L~Ls~N 188 (210)
T d1h6ta2 121 HNGISDIN-GLVHLPQLESLYLGNNK-ITDIT-VLSRLTKLDTLSLEDNQI-SDIV-PLAGLTKLQNLYLSKN 188 (210)
T ss_dssp TSCCCCCG-GGGGCTTCCEEECCSSC-CCCCG-GGGGCTTCSEEECCSSCC-CCCG-GGTTCTTCCEEECCSS
T ss_pred cccccccc-ccccccccccccccccc-ccccc-cccccccccccccccccc-cccc-cccCCCCCCEEECCCC
Confidence 66555443 34555555666655555 33332 244555555666655543 2333 2555555555555443
No 9
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.35 E-value=3e-12 Score=114.66 Aligned_cols=143 Identities=15% Similarity=0.209 Sum_probs=98.9
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEee
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLN 324 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls 324 (437)
.++.|++++|+... . ..+..+++|++|++++|. +..++....+++|+.|++++|. ...++.+.++++|+.|+++
T Consensus 41 ~l~~L~l~~~~i~~-l---~~l~~l~nL~~L~Ls~N~-l~~~~~l~~l~~L~~L~l~~n~-~~~~~~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 41 QVTTLQADRLGIKS-I---DGVEYLNNLTQINFSNNQ-LTDITPLKNLTKLVDILMNNNQ-IADITPLANLTNLTGLTLF 114 (199)
T ss_dssp TCCEEECTTSCCCC-C---TTGGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSC-CCCCGGGTTCTTCSEEECC
T ss_pred CCCEEECCCCCCCC-c---cccccCCCcCcCcccccc-ccCcccccCCcccccccccccc-ccccccccccccccccccc
Confidence 45667777765432 1 125567888888888886 5556542277888888888775 4455667778888888888
Q ss_pred CCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeeccccc
Q 013724 325 GTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVY 398 (437)
Q Consensus 325 ~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~ 398 (437)
++.+..++ .+..+++|+.|++++|. +..+| .+..+++|+.|++.+|. +..++ .++++++|+.|++.++.
T Consensus 115 ~~~~~~~~-~~~~l~~L~~L~l~~n~-l~~~~-~l~~~~~L~~L~l~~n~-l~~l~-~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 115 NNQITDID-PLKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFSSNQ-VTDLK-PLANLTTLERLDISSNK 183 (199)
T ss_dssp SSCCCCCG-GGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSSC
T ss_pred cccccccc-ccchhhhhHHhhhhhhh-hcccc-ccccccccccccccccc-ccCCc-cccCCCCCCEEECCCCC
Confidence 77776654 46777888888888877 55554 46778888888888765 34454 47778888888876653
No 10
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.34 E-value=1.4e-12 Score=108.20 Aligned_cols=99 Identities=26% Similarity=0.299 Sum_probs=71.9
Q ss_pred EEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCCCC
Q 013724 273 VVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDCKS 351 (437)
Q Consensus 273 ~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n~~ 351 (437)
++|++++|+ ++.++..-.+++|++|++++|.+ ..+|. ++.+++|+.|++++|.|+.+| .++.+++|+.|++++|+
T Consensus 1 R~L~Ls~n~-l~~l~~l~~l~~L~~L~ls~N~l-~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~- 76 (124)
T d1dcea3 1 RVLHLAHKD-LTVLCHLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR- 76 (124)
T ss_dssp SEEECTTSC-CSSCCCGGGGTTCCEEECCSSCC-CCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-
T ss_pred CEEEcCCCC-CCCCcccccCCCCCEEECCCCcc-CcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCc-
Confidence 467788877 66666422777888888887754 45554 777888888888888888775 47788888888888877
Q ss_pred CCCCc--cccCCCCCCCEEeeeCCCC
Q 013724 352 LKSLP--SGLCKLKSLKYLTLNGCSI 375 (437)
Q Consensus 352 l~~LP--~~l~~L~~L~~L~Ls~c~~ 375 (437)
+..+| ..+..+++|++|++++|+.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcC
Confidence 66555 3467778888888887764
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=8.6e-12 Score=117.51 Aligned_cols=158 Identities=20% Similarity=0.210 Sum_probs=115.4
Q ss_pred ccCceEEEeccCCCCCCCcCcc-C-CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccCh-hhcCCCCCCE
Q 013724 268 HLNTLVVLNLRDCKSLKSLPAG-I-HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELPS-SIECLYKLLH 343 (437)
Q Consensus 268 ~l~~L~~L~Ls~n~~l~~lp~~-~-~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp~-~i~~L~~L~~ 343 (437)
.+..+..+.+..+..+..++.. + .+++|++|++++|......+. +..+.+|+.+++++|.|+.+|+ .+..+++|+.
T Consensus 78 ~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~ 157 (284)
T d1ozna_ 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157 (284)
T ss_dssp TCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccccccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhh
Confidence 3445555554444335555433 3 778899999998876544444 7778899999999999998864 5778899999
Q ss_pred EeccCCCCCCCCc-cccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccccccCCCcccccccccCC
Q 013724 344 LDLEDCKSLKSLP-SGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETSAASGDDWKSAFDAAADG 422 (437)
Q Consensus 344 L~L~~n~~l~~LP-~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~s~ 422 (437)
|++++|. +..+| ..+.++++|+.|++++|...+-.|..|..+++|+.|++..+... ...+........++.+..++
T Consensus 158 L~l~~N~-l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~--~~~~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 158 LFLHGNR-ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS--ALPTEALAPLRALQYLRLND 234 (284)
T ss_dssp EECCSSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS--CCCHHHHTTCTTCCEEECCS
T ss_pred cccccCc-ccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccc--cccccccccccccCEEEecC
Confidence 9999988 55554 56788999999999998877777888999999999988655433 23333445667788888888
Q ss_pred CCCCcc
Q 013724 423 PVKPSQ 428 (437)
Q Consensus 423 ~~~~~~ 428 (437)
+.+.+.
T Consensus 235 N~l~C~ 240 (284)
T d1ozna_ 235 NPWVCD 240 (284)
T ss_dssp SCEECS
T ss_pred CCCCCC
Confidence 877754
No 12
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.32 E-value=6.4e-12 Score=113.45 Aligned_cols=139 Identities=21% Similarity=0.272 Sum_probs=84.9
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEee
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLN 324 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls 324 (437)
.|+.|++++|.... .+ .+..+++|+.|++++|+ ++.+|....+++|+.|++++|.. ..++.+..+++|+.++++
T Consensus 69 ~L~~L~L~~n~i~~-l~---~~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l~~~~~-~~~~~l~~l~~l~~l~~~ 142 (210)
T d1h6ta2 69 NVTKLFLNGNKLTD-IK---PLANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSLEHNGI-SDINGLVHLPQLESLYLG 142 (210)
T ss_dssp TCCEEECCSSCCCC-CG---GGTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEECTTSCC-CCCGGGGGCTTCCEEECC
T ss_pred CCCEEeCCCccccC-cc---ccccCcccccccccccc-ccccccccccccccccccccccc-cccccccccccccccccc
Confidence 46666666664332 11 13456677777777766 55565433667777777776643 344556666777777777
Q ss_pred CCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeec
Q 013724 325 GTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTF 394 (437)
Q Consensus 325 ~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~ 394 (437)
+|.++.++ .+..+++|+.|++++|+ +..++. +.++++|+.|++++|. +..+| .+..|++|+.|++
T Consensus 143 ~n~l~~~~-~~~~l~~L~~l~l~~n~-l~~i~~-l~~l~~L~~L~Ls~N~-i~~l~-~l~~l~~L~~L~L 207 (210)
T d1h6ta2 143 NNKITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP-LAGLTKLQNLYLSKNH-ISDLR-ALAGLKNLDVLEL 207 (210)
T ss_dssp SSCCCCCG-GGGGCTTCSEEECCSSC-CCCCGG-GTTCTTCCEEECCSSC-CCBCG-GGTTCTTCSEEEE
T ss_pred cccccccc-ccccccccccccccccc-cccccc-ccCCCCCCEEECCCCC-CCCCh-hhcCCCCCCEEEc
Confidence 77666543 35566777777777766 445543 6667777777777664 45565 4666777777665
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=5.8e-12 Score=118.71 Aligned_cols=132 Identities=22% Similarity=0.239 Sum_probs=111.8
Q ss_pred ccccccCceEEEeccCCCCCCCcCccC--CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccC-hhhcCCC
Q 013724 264 SFSQHLNTLVVLNLRDCKSLKSLPAGI--HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELP-SSIECLY 339 (437)
Q Consensus 264 ~~~~~l~~L~~L~Ls~n~~l~~lp~~~--~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp-~~i~~L~ 339 (437)
..+..+++|++|++++|. +..++... .+.+|+.+++++|.+....+. +..+++|+.|+|++|+|+.+| ..+..++
T Consensus 99 ~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~ 177 (284)
T d1ozna_ 99 ATFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177 (284)
T ss_dssp TTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred hhhcccccCCEEecCCcc-cccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccc
Confidence 346678999999999998 55555444 788999999999876544444 888999999999999999885 4678899
Q ss_pred CCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeeccc
Q 013724 340 KLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIY 396 (437)
Q Consensus 340 ~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~ 396 (437)
+|+.|++.+|+..+..|..+.++++|++|++++|...+..|..++.+.+|+.|++.+
T Consensus 178 ~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 178 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234 (284)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCS
T ss_pred ccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecC
Confidence 999999999996666688899999999999999988777778899999999999865
No 14
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.30 E-value=1.2e-11 Score=110.72 Aligned_cols=159 Identities=14% Similarity=0.183 Sum_probs=109.8
Q ss_pred cccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEec
Q 013724 267 QHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDL 346 (437)
Q Consensus 267 ~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L 346 (437)
..+.+|+.|++++|. +..++..-.+++|++|+|++|.+ ..++.+.++++|++|++++|.+..++. +.++++|+.|++
T Consensus 37 ~~l~~l~~L~l~~~~-i~~l~~l~~l~nL~~L~Ls~N~l-~~~~~l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l 113 (199)
T d2omxa2 37 TDLDQVTTLQADRLG-IKSIDGVEYLNNLTQINFSNNQL-TDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTL 113 (199)
T ss_dssp HHHTTCCEEECTTSC-CCCCTTGGGCTTCCEEECCSSCC-CCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEC
T ss_pred HHhcCCCEEECCCCC-CCCccccccCCCcCcCccccccc-cCcccccCCcccccccccccccccccc-cccccccccccc
Confidence 356788888888887 66665322788888888888754 445558888888888888888887764 778888888888
Q ss_pred cCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccccccCCCcccccccccCCCCCC
Q 013724 347 EDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETSAASGDDWKSAFDAAADGPVKP 426 (437)
Q Consensus 347 ~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~s~~~~~ 426 (437)
++|. ...+ ..+..+++|+.|++++|. +..+| .+..+++|+.|++.+|...... .....++++.+..+++.+.
T Consensus 114 ~~~~-~~~~-~~~~~l~~L~~L~l~~n~-l~~~~-~l~~~~~L~~L~l~~n~l~~l~----~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 114 FNNQ-ITDI-DPLKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFSSNQVTDLK----PLANLTTLERLDISSNKVS 185 (199)
T ss_dssp CSSC-CCCC-GGGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCSEEECCSSCCCCCG----GGTTCTTCCEEECCSSCCC
T ss_pred cccc-cccc-cccchhhhhHHhhhhhhh-hcccc-cccccccccccccccccccCCc----cccCCCCCCEEECCCCCCC
Confidence 8877 3333 346778888888888875 44555 5777888888887665332211 2345677778888777665
Q ss_pred cc-cccccccC
Q 013724 427 SQ-LLSFCIQL 436 (437)
Q Consensus 427 ~~-d~s~c~~l 436 (437)
.. .++.+.+|
T Consensus 186 ~i~~l~~L~~L 196 (199)
T d2omxa2 186 DISVLAKLTNL 196 (199)
T ss_dssp CCGGGGGCTTC
T ss_pred CCccccCCCCC
Confidence 43 24444443
No 15
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.29 E-value=9.1e-12 Score=110.76 Aligned_cols=108 Identities=23% Similarity=0.247 Sum_probs=86.7
Q ss_pred CceEEEeccCCCCCCCcCccC--CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccCh-hhcCCCCCCEEe
Q 013724 270 NTLVVLNLRDCKSLKSLPAGI--HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELPS-SIECLYKLLHLD 345 (437)
Q Consensus 270 ~~L~~L~Ls~n~~l~~lp~~~--~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp~-~i~~L~~L~~L~ 345 (437)
+++++|+|++|.+...++... .+++|+.|+|++|.+....+. +..+++|++|+|++|+|+.+|+ .|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 578899999998444454443 789999999999887766665 8889999999999999998865 578899999999
Q ss_pred ccCCCCCCCCc-cccCCCCCCCEEeeeCCCCCCc
Q 013724 346 LEDCKSLKSLP-SGLCKLKSLKYLTLNGCSILQR 378 (437)
Q Consensus 346 L~~n~~l~~LP-~~l~~L~~L~~L~Ls~c~~l~~ 378 (437)
|++|. +..+| ..+..+++|++|+|++|+....
T Consensus 109 L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 109 LYDNQ-ISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCSSC-CCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCcc-ccccCHHHhcCCcccccccccccccccc
Confidence 99988 66665 4578899999999998876543
No 16
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.27 E-value=1.2e-11 Score=109.87 Aligned_cols=122 Identities=17% Similarity=0.153 Sum_probs=98.5
Q ss_pred EEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCC--CCCCCCCCEEEeeCCCCcccC-hhhcCCCCCCEEeccCC
Q 013724 273 VVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPD--ISSAANIEEMFLNGTAIEELP-SSIECLYKLLHLDLEDC 349 (437)
Q Consensus 273 ~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~--l~~l~~L~~L~Ls~n~l~~lp-~~i~~L~~L~~L~L~~n 349 (437)
+.++.+++. ++.+|..+ .+++++|+|++|.+...++. |.++++|+.|+|++|.+..++ ..+..+++|+.|+|++|
T Consensus 11 ~~v~Cs~~~-L~~iP~~l-p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRG-LKEIPRDI-PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSC-CSSCCSCC-CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCC-cCccCCCC-CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 467888887 77888876 36899999999987665543 788999999999999999664 57788999999999999
Q ss_pred CCCCCCc-cccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccc
Q 013724 350 KSLKSLP-SGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYV 397 (437)
Q Consensus 350 ~~l~~LP-~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~ 397 (437)
+ +..+| ..|.++++|++|+|++|.+.+--|..|..+.+|+.|++.+.
T Consensus 89 ~-l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 89 K-IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp C-CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC
T ss_pred c-ccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccc
Confidence 8 66665 45789999999999997754444556889999999998653
No 17
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.26 E-value=1.4e-11 Score=102.08 Aligned_cols=99 Identities=21% Similarity=0.186 Sum_probs=86.0
Q ss_pred cEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCC
Q 013724 296 KELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSI 375 (437)
Q Consensus 296 ~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~ 375 (437)
|+|+|++|++ ..++.+..+++|++|++++|.|+.+|+.++.+++|+.|++++|. ++.+|. ++.+++|++|++++|.
T Consensus 1 R~L~Ls~n~l-~~l~~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~-~~~l~~L~~L~l~~N~- 76 (124)
T d1dcea3 1 RVLHLAHKDL-TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVDG-VANLPRLQELLLCNNR- 76 (124)
T ss_dssp SEEECTTSCC-SSCCCGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCGG-GTTCSSCCEEECCSSC-
T ss_pred CEEEcCCCCC-CCCcccccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccCc-cccccccCeEECCCCc-
Confidence 5899999865 57778999999999999999999999999999999999999998 788874 8999999999999976
Q ss_pred CCccc--hhccCCCCCceeeccccc
Q 013724 376 LQRLN--FDIWSILPLVLTTFIYVY 398 (437)
Q Consensus 376 l~~lP--~~l~~L~~L~~L~~~~~~ 398 (437)
+..+| ..+..+++|+.|++.+..
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCc
Confidence 44454 468889999999986544
No 18
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.23 E-value=9.1e-11 Score=111.20 Aligned_cols=174 Identities=20% Similarity=0.071 Sum_probs=100.9
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccC-CCCCccEEeeeCCCCCCCCCC------------
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPD------------ 311 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~------------ 311 (437)
.++.|+|++|... ..+. ..+.++++|++|++++|......|..+ .++.|+.|++++|++. .+|.
T Consensus 32 ~l~~L~Ls~N~i~-~l~~-~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~~~~l~~L~~~ 108 (305)
T d1xkua_ 32 DTALLDLQNNKIT-EIKD-GDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVH 108 (305)
T ss_dssp TCCEEECCSSCCC-CBCT-TTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECC
T ss_pred CCCEEECcCCcCC-CcCh-hHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccchhhhhhhhhcc
Confidence 4667777776543 2222 234567788888888887433334445 7788888888776432 2221
Q ss_pred -------------------------------------CCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCCCCCCC
Q 013724 312 -------------------------------------ISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDCKSLKS 354 (437)
Q Consensus 312 -------------------------------------l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~ 354 (437)
+..+++|+.+++++|.+..+|..+ +++|+.|++.+|.....
T Consensus 109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~--~~~L~~L~l~~n~~~~~ 186 (305)
T d1xkua_ 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKV 186 (305)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSC--CTTCSEEECTTSCCCEE
T ss_pred ccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCccc--CCccCEEECCCCcCCCC
Confidence 112234444444444444443322 34555666665554445
Q ss_pred CccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccccccCCCcccccccccCCCCCC
Q 013724 355 LPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETSAASGDDWKSAFDAAADGPVKP 426 (437)
Q Consensus 355 LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~s~~~~~ 426 (437)
.+..+..++.++.|++++|...+-.+..+..+++|+.|++.++... ..+.....++.++.+..+.+.+.
T Consensus 187 ~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~---~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 187 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV---KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS---SCCTTTTTCSSCCEEECCSSCCC
T ss_pred ChhHhhccccccccccccccccccccccccccccceeeeccccccc---ccccccccccCCCEEECCCCccC
Confidence 5556667777777777776554444566677777777777665322 23445556677777777776555
No 19
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=5.9e-12 Score=109.30 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=97.6
Q ss_pred hhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEee
Q 013724 246 LKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLN 324 (437)
Q Consensus 246 L~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls 324 (437)
+++|+|++|.... .+ .....+++|+.|+|++|. +..++....+++|+.|+|++|.+....+. +..+++|+.|+++
T Consensus 20 lr~L~L~~n~I~~-i~--~~~~~l~~L~~L~Ls~N~-i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 20 DRELDLRGYKIPV-IE--NLGATLDQFDAIDFSDNE-IRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp CEEEECTTSCCCS-CC--CGGGGTTCCSEEECCSSC-CCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CcEEECCCCCCCc-cC--ccccccccCCEEECCCCC-CCccCCcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 5778999886543 32 345678999999999998 77786433899999999999976554444 5679999999999
Q ss_pred CCCCcccCh--hhcCCCCCCEEeccCCCCCCCCcc----ccCCCCCCCEEeee
Q 013724 325 GTAIEELPS--SIECLYKLLHLDLEDCKSLKSLPS----GLCKLKSLKYLTLN 371 (437)
Q Consensus 325 ~n~l~~lp~--~i~~L~~L~~L~L~~n~~l~~LP~----~l~~L~~L~~L~Ls 371 (437)
+|.|+.++. .+..+++|++|++++|+ +..+|. .+..+++|+.||-.
T Consensus 96 ~N~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 96 NNSLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp SCCCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETTE
T ss_pred cccccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCCC
Confidence 999998764 68899999999999998 677764 47889999999843
No 20
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.20 E-value=4.1e-11 Score=109.00 Aligned_cols=126 Identities=25% Similarity=0.357 Sum_probs=68.1
Q ss_pred cccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccC--------------
Q 013724 267 QHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELP-------------- 332 (437)
Q Consensus 267 ~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp-------------- 332 (437)
..+++|+.|++++|. +..++....+++|++|++++|. .+.++.+.++++|+.|+++++.+..++
T Consensus 60 ~~l~~L~~L~ls~n~-i~~~~~l~~l~~l~~l~~~~n~-~~~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~ 137 (227)
T d1h6ua2 60 QYLNNLIGLELKDNQ-ITDLAPLKNLTKITELELSGNP-LKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLD 137 (227)
T ss_dssp GGCTTCCEEECCSSC-CCCCGGGTTCCSCCEEECCSCC-CSCCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECC
T ss_pred hcCCCCcEeecCCce-eecccccccccccccccccccc-ccccccccccccccccccccccccccchhccccchhhhhch
Confidence 445555555555554 3333322244555555555443 223444444455555554443322111
Q ss_pred -------hhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeeccccc
Q 013724 333 -------SSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVY 398 (437)
Q Consensus 333 -------~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~ 398 (437)
..+..+++|+.|++.+|. +..++. ++++++|+.|++++|. +..+| .+.++++|+.|++.+|.
T Consensus 138 ~~~~~~~~~~~~~~~L~~L~l~~n~-~~~~~~-l~~l~~L~~L~Ls~n~-l~~l~-~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 138 LNQITNISPLAGLTNLQYLSIGNAQ-VSDLTP-LANLSKLTTLKADDNK-ISDIS-PLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp SSCCCCCGGGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECTTSC
T ss_pred hhhhchhhhhccccccccccccccc-cccchh-hcccccceecccCCCc-cCCCh-hhcCCCCCCEEECcCCc
Confidence 124556677777777776 444433 6777777788877764 45565 36777777777776653
No 21
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.19 E-value=4e-11 Score=116.48 Aligned_cols=143 Identities=16% Similarity=0.184 Sum_probs=99.6
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEee
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLN 324 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls 324 (437)
.|+.+++.+|.... ...+..+++|+.|++.+|. +..++....+++|+.|++++|.+ ..++.+..++.++.+.+.
T Consensus 220 ~L~~L~l~~n~l~~----~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~L~~L~l~~~~l-~~~~~~~~~~~l~~l~~~ 293 (384)
T d2omza2 220 NLDELSLNGNQLKD----IGTLASLTNLTDLDLANNQ-ISNLAPLSGLTKLTELKLGANQI-SNISPLAGLTALTNLELN 293 (384)
T ss_dssp TCCEEECCSSCCCC----CGGGGGCTTCSEEECCSSC-CCCCGGGTTCTTCSEEECCSSCC-CCCGGGTTCTTCSEEECC
T ss_pred CCCEEECCCCCCCC----cchhhcccccchhccccCc-cCCCCcccccccCCEeeccCccc-CCCCcccccccccccccc
Confidence 56677777775432 1235668889999999887 55666544788899999988754 445556777777888887
Q ss_pred CCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeeccccc
Q 013724 325 GTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVY 398 (437)
Q Consensus 325 ~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~ 398 (437)
.|.++.++ .+..+++|+.|++++|+ +..++. +..+++|++|++++|. ++.+| .+.++++|+.|++.++.
T Consensus 294 ~n~l~~~~-~~~~~~~l~~L~ls~n~-l~~l~~-l~~l~~L~~L~L~~n~-l~~l~-~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 294 ENQLEDIS-PISNLKNLTYLTLYFNN-ISDISP-VSSLTKLQRLFFANNK-VSDVS-SLANLTNINWLSAGHNQ 362 (384)
T ss_dssp SSCCSCCG-GGGGCTTCSEEECCSSC-CSCCGG-GGGCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECCSSC
T ss_pred cccccccc-ccchhcccCeEECCCCC-CCCCcc-cccCCCCCEEECCCCC-CCCCh-hHcCCCCCCEEECCCCc
Confidence 77777654 36677778888887776 555543 6677778888887774 44565 57777778877775543
No 22
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.16 E-value=1.9e-10 Score=108.91 Aligned_cols=175 Identities=17% Similarity=0.153 Sum_probs=126.8
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCcc-----------------------------------
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAG----------------------------------- 289 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~----------------------------------- 289 (437)
.|+.|++++|......+ ..+..+++|+.|++++|+ ++.+|..
T Consensus 56 ~L~~L~l~~n~~~~i~~--~~f~~l~~L~~L~l~~n~-l~~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~ 132 (305)
T d1xkua_ 56 NLHTLILINNKISKISP--GAFAPLVKLERLYLSKNQ-LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 132 (305)
T ss_dssp TCCEEECCSSCCCCBCT--TTTTTCTTCCEEECCSSC-CSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred cccccccccccccccch--hhhhCCCccCEecccCCc-cCcCccchhhhhhhhhccccchhhhhhhhhhccccccccccc
Confidence 57889999887664332 346778999999999886 4333311
Q ss_pred -------------C-CCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCc-ccChhhcCCCCCCEEeccCCCCCCC
Q 013724 290 -------------I-HLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIE-ELPSSIECLYKLLHLDLEDCKSLKS 354 (437)
Q Consensus 290 -------------~-~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~-~lp~~i~~L~~L~~L~L~~n~~l~~ 354 (437)
+ .+++|+.+++++|.+. .+|. ..+++|+.|++++|.+. ..+..+..++.++.|++++|. +..
T Consensus 133 ~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~-~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~-l~~ 209 (305)
T d1xkua_ 133 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS-ISA 209 (305)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCS-SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSC-CCE
T ss_pred cccccccCCCccccccccccCccccccCCcc-ccCc-ccCCccCEEECCCCcCCCCChhHhhcccccccccccccc-ccc
Confidence 1 3566778888877543 4443 23679999999999988 456788999999999999998 555
Q ss_pred C-ccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccc----cccCCCcccccccccCCCCCC
Q 013724 355 L-PSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETS----AASGDDWKSAFDAAADGPVKP 426 (437)
Q Consensus 355 L-P~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~----~~~~~~~~~l~~~~~s~~~~~ 426 (437)
+ |..+.++++|++|+|++|. +..+|..+.++++|+.|++.++........ .........+..+..+++.+.
T Consensus 210 ~~~~~~~~l~~L~~L~L~~N~-L~~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 210 VDNGSLANTPHLRELHLNNNK-LVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp ECTTTGGGSTTCCEEECCSSC-CSSCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cccccccccccceeeeccccc-ccccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 5 5678899999999999985 678999999999999999987654332211 111223455677777777665
No 23
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.16 E-value=1.6e-10 Score=105.00 Aligned_cols=140 Identities=19% Similarity=0.265 Sum_probs=69.5
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCC----------------
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKR---------------- 308 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~---------------- 308 (437)
.|+.+++++|...... .+..+++|+.|++++|. .+.++....+++|+.|++++|.....
T Consensus 64 ~L~~L~ls~n~i~~~~----~l~~l~~l~~l~~~~n~-~~~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~ 138 (227)
T d1h6ua2 64 NLIGLELKDNQITDLA----PLKNLTKITELELSGNP-LKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL 138 (227)
T ss_dssp TCCEEECCSSCCCCCG----GGTTCCSCCEEECCSCC-CSCCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCS
T ss_pred CCcEeecCCceeeccc----ccccccccccccccccc-ccccccccccccccccccccccccccchhccccchhhhhchh
Confidence 4455555554332211 13445556666666554 44444322555566665555432211
Q ss_pred -----CCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhc
Q 013724 309 -----LPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDI 383 (437)
Q Consensus 309 -----lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l 383 (437)
.+.+..+++|+.|++++|.+..++. ++++++|+.|+|++|+ +..+|. +.++++|++|+|++|+ +..+| .+
T Consensus 139 ~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~Ls~n~-l~~l~~-l~~l~~L~~L~Ls~N~-lt~i~-~l 213 (227)
T d1h6ua2 139 NQITNISPLAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK-ISDISP-LASLPNLIEVHLKNNQ-ISDVS-PL 213 (227)
T ss_dssp SCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCCGG-GGGCTTCCEEECTTSC-CCBCG-GG
T ss_pred hhhchhhhhccccccccccccccccccchh-hcccccceecccCCCc-cCCChh-hcCCCCCCEEECcCCc-CCCCc-cc
Confidence 0013334555555555555554332 5555666666666654 445543 5555666666666553 44454 25
Q ss_pred cCCCCCceeec
Q 013724 384 WSILPLVLTTF 394 (437)
Q Consensus 384 ~~L~~L~~L~~ 394 (437)
.++++|+.|++
T Consensus 214 ~~l~~L~~L~l 224 (227)
T d1h6ua2 214 ANTSNLFIVTL 224 (227)
T ss_dssp TTCTTCCEEEE
T ss_pred ccCCCCCEEEe
Confidence 55555655554
No 24
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.10 E-value=2.7e-10 Score=110.46 Aligned_cols=159 Identities=23% Similarity=0.224 Sum_probs=99.6
Q ss_pred cccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEec
Q 013724 267 QHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDL 346 (437)
Q Consensus 267 ~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L 346 (437)
..+++|+.|++++|. +..++....+++|+.|++++|.+ ..++.+..+++|+.|+++++.+..+++ +..++.++.+.+
T Consensus 216 ~~~~~L~~L~l~~n~-l~~~~~l~~l~~L~~L~l~~n~l-~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~l~~l~~ 292 (384)
T d2omza2 216 GILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQI-SNLAPLSGLTKLTELKLGANQISNISP-LAGLTALTNLEL 292 (384)
T ss_dssp GGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCSSCC-CCCGGGTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEEC
T ss_pred cccCCCCEEECCCCC-CCCcchhhcccccchhccccCcc-CCCCcccccccCCEeeccCcccCCCCc-cccccccccccc
Confidence 345677777777776 55555333677777777777753 345557777777777777777776653 666777777777
Q ss_pred cCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccccchhhccccccCCCcccccccccCCCCCC
Q 013724 347 EDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYVYKFFVETSAASGDDWKSAFDAAADGPVKP 426 (437)
Q Consensus 347 ~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~s~~~~~ 426 (437)
.+|. +..++ .+..+++|+.|++++|.. ..++ .+..+++|+.|++.+|...... ....++.++.+..+++.+.
T Consensus 293 ~~n~-l~~~~-~~~~~~~l~~L~ls~n~l-~~l~-~l~~l~~L~~L~L~~n~l~~l~----~l~~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 293 NENQ-LEDIS-PISNLKNLTYLTLYFNNI-SDIS-PVSSLTKLQRLFFANNKVSDVS----SLANLTNINWLSAGHNQIS 364 (384)
T ss_dssp CSSC-CSCCG-GGGGCTTCSEEECCSSCC-SCCG-GGGGCTTCCEEECCSSCCCCCG----GGGGCTTCCEEECCSSCCC
T ss_pred cccc-ccccc-ccchhcccCeEECCCCCC-CCCc-ccccCCCCCEEECCCCCCCCCh----hHcCCCCCCEEECCCCcCC
Confidence 7776 44443 366677777777777653 3444 3667777777777666432211 2334566777777766655
Q ss_pred cc-cccccccC
Q 013724 427 SQ-LLSFCIQL 436 (437)
Q Consensus 427 ~~-d~s~c~~l 436 (437)
.. .+..|.+|
T Consensus 365 ~l~~l~~l~~L 375 (384)
T d2omza2 365 DLTPLANLTRI 375 (384)
T ss_dssp BCGGGTTCTTC
T ss_pred CChhhccCCCC
Confidence 32 34444443
No 25
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=2.1e-10 Score=98.65 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=87.1
Q ss_pred ceEEEeccCCCCCCCcCccC-CCCCccEEeeeCCCCCCCCCC--CCCCCCCCEEEeeCCCCcccC-hhhcCCCCCCEEec
Q 013724 271 TLVVLNLRDCKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPD--ISSAANIEEMFLNGTAIEELP-SSIECLYKLLHLDL 346 (437)
Q Consensus 271 ~L~~L~Ls~n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~--l~~l~~L~~L~Ls~n~l~~lp-~~i~~L~~L~~L~L 346 (437)
....++..++. +..+|..+ .+++|+.|+|++++.+..++. |.++++|+.|+|++|+|+.++ ..|..+++|+.|+|
T Consensus 9 ~~~~l~c~~~~-~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDG-ALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSC-CCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCC-CccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 34567778776 66778777 889999999988776776664 899999999999999999985 46899999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEeeeCCCCC
Q 013724 347 EDCKSLKSLPSGLCKLKSLKYLTLNGCSIL 376 (437)
Q Consensus 347 ~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l 376 (437)
++|+ ++.+|..+....+|+.|+|++|+..
T Consensus 88 s~N~-l~~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNA-LESLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CSSC-CSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred cCCC-CcccChhhhccccccccccCCCccc
Confidence 9999 8889887666668999999998753
No 26
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.07 E-value=8e-13 Score=118.75 Aligned_cols=125 Identities=21% Similarity=0.243 Sum_probs=99.7
Q ss_pred cccccCceEEEeccCCCCCCCcCccC-CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccChhhcCCCCCC
Q 013724 265 FSQHLNTLVVLNLRDCKSLKSLPAGI-HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELPSSIECLYKLL 342 (437)
Q Consensus 265 ~~~~l~~L~~L~Ls~n~~l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~ 342 (437)
.+..+++|+.|+|++|. +..++. + .+++|+.|+|++|. +..+|. +..+++|+.|++++|.|+.++ .+..+++|+
T Consensus 43 sl~~L~~L~~L~Ls~n~-I~~i~~-l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~ 118 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNN-IEKISS-LSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCCEEECSEEE-ESCCCC-HHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSS
T ss_pred HHhcccccceeECcccC-CCCccc-ccCCccccChhhcccc-cccccccccccccccccccccccccccc-ccccccccc
Confidence 35678899999999998 777764 5 88999999999986 456776 444678999999999999875 488899999
Q ss_pred EEeccCCCCCCCCc--cccCCCCCCCEEeeeCCCCCCccch----------hccCCCCCceeec
Q 013724 343 HLDLEDCKSLKSLP--SGLCKLKSLKYLTLNGCSILQRLNF----------DIWSILPLVLTTF 394 (437)
Q Consensus 343 ~L~L~~n~~l~~LP--~~l~~L~~L~~L~Ls~c~~l~~lP~----------~l~~L~~L~~L~~ 394 (437)
.|+|++|. +..++ ..+..+++|+.|+|++|+.....+. .+..+++|+.|+.
T Consensus 119 ~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD~ 181 (198)
T d1m9la_ 119 VLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDG 181 (198)
T ss_dssp EEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEESS
T ss_pred ccccccch-hccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeCC
Confidence 99999998 77776 3588999999999999875433222 2567888888875
No 27
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=1.8e-11 Score=115.62 Aligned_cols=152 Identities=21% Similarity=0.299 Sum_probs=108.0
Q ss_pred HhhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCc--CccC-CCCCccEEeeeCCCCCCC--CCC-CCC-CC
Q 013724 244 NALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSL--PAGI-HLEFLKELDLSGCSKLKR--LPD-ISS-AA 316 (437)
Q Consensus 244 ~aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~l--p~~~-~l~~L~~L~Ls~n~~~~~--lp~-l~~-l~ 316 (437)
..|+.|.+.+|...... ...+..+++|+.|++++|..++.. .... .+++|++|+|++|..+.. +.. +.. .+
T Consensus 71 ~~L~~L~L~~~~l~~~~--~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~ 148 (284)
T d2astb2 71 SKLQNLSLEGLRLSDPI--VNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSE 148 (284)
T ss_dssp CCCSEEECTTCBCCHHH--HHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCT
T ss_pred CCcccccccccCCCcHH--HHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccccc
Confidence 46788888888542211 123456789999999998756532 1222 689999999999865542 122 322 46
Q ss_pred CCCEEEeeCC--CCc--ccChhhcCCCCCCEEeccCCCCCC-CCccccCCCCCCCEEeeeCCCCCC-ccchhccCCCCCc
Q 013724 317 NIEEMFLNGT--AIE--ELPSSIECLYKLLHLDLEDCKSLK-SLPSGLCKLKSLKYLTLNGCSILQ-RLNFDIWSILPLV 390 (437)
Q Consensus 317 ~L~~L~Ls~n--~l~--~lp~~i~~L~~L~~L~L~~n~~l~-~LP~~l~~L~~L~~L~Ls~c~~l~-~lP~~l~~L~~L~ 390 (437)
+|+.|+++++ .++ .+..-+.++++|+.|++++|..++ ..+..+.++++|++|+|++|+.+. .....++++++|+
T Consensus 149 ~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~ 228 (284)
T d2astb2 149 TITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLK 228 (284)
T ss_dssp TCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred ccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCC
Confidence 8999999874 354 344455778999999999987665 345668889999999999987654 3445678889999
Q ss_pred eeecccc
Q 013724 391 LTTFIYV 397 (437)
Q Consensus 391 ~L~~~~~ 397 (437)
.|++.+|
T Consensus 229 ~L~l~~~ 235 (284)
T d2astb2 229 TLQVFGI 235 (284)
T ss_dssp EEECTTS
T ss_pred EEeeeCC
Confidence 9998776
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=2.2e-09 Score=97.77 Aligned_cols=149 Identities=16% Similarity=0.196 Sum_probs=73.0
Q ss_pred hhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccC--CCCCccEEeeeCCCCCCCCC-C-CCCCCCCCEE
Q 013724 246 LKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGI--HLEFLKELDLSGCSKLKRLP-D-ISSAANIEEM 321 (437)
Q Consensus 246 L~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~--~l~~L~~L~Ls~n~~~~~lp-~-l~~l~~L~~L 321 (437)
+++|+++++... ..+. ..+.++++|++|++++|.....++... .++.++.|.+..++.+..++ . +.++++|+.|
T Consensus 31 l~~L~Ls~n~i~-~l~~-~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 31 AIELRFVLTKLR-VIQK-GAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp CSEEEEESCCCC-EECT-TTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCEEECcCCcCC-ccCh-hHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 345555554432 2221 123445666666666665444343332 55555655555433333222 2 4555666666
Q ss_pred EeeCCCCcccCh--------------------------hhcCC-CCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCC
Q 013724 322 FLNGTAIEELPS--------------------------SIECL-YKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCS 374 (437)
Q Consensus 322 ~Ls~n~l~~lp~--------------------------~i~~L-~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~ 374 (437)
++++|.+..++. .+..+ ..++.|++.+|. +..++..+...++++.+....++
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~-l~~i~~~~~~~~~l~~~~~l~~n 187 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG-IQEIHNCAFNGTQLDELNLSDNN 187 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC-CCEECTTTTTTCCEEEEECTTCT
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccc-ccccccccccchhhhcccccccc
Confidence 666555543322 11222 245555555554 44555544455555555444445
Q ss_pred CCCccchh-ccCCCCCceeecccc
Q 013724 375 ILQRLNFD-IWSILPLVLTTFIYV 397 (437)
Q Consensus 375 ~l~~lP~~-l~~L~~L~~L~~~~~ 397 (437)
.++.+|.. +.++++|+.|++.++
T Consensus 188 ~l~~l~~~~f~~l~~L~~L~Ls~N 211 (242)
T d1xwdc1 188 NLEELPNDVFHGASGPVILDISRT 211 (242)
T ss_dssp TCCCCCTTTTTTSCCCSEEECTTS
T ss_pred ccccccHHHhcCCCCCCEEECCCC
Confidence 55566543 566666666666443
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.86 E-value=2.5e-11 Score=108.75 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=94.4
Q ss_pred CCCcCccC-CCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCC
Q 013724 283 LKSLPAGI-HLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCK 361 (437)
Q Consensus 283 l~~lp~~~-~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~ 361 (437)
+..++..+ .+++|++|+|++|. +..++.+..+++|+.|+|++|.|+.+|.....+++|+.|++++|. ++.++ .+..
T Consensus 37 i~~l~~sl~~L~~L~~L~Ls~n~-I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~-i~~l~-~~~~ 113 (198)
T d1m9la_ 37 IEKMDATLSTLKACKHLALSTNN-IEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQ-IASLS-GIEK 113 (198)
T ss_dssp CCCCHHHHHHTTTCCEEECSEEE-ESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEE-CCCHH-HHHH
T ss_pred hhhhhhHHhcccccceeECcccC-CCCcccccCCccccChhhccccccccccccccccccccccccccc-ccccc-cccc
Confidence 45566666 89999999999986 456777889999999999999999998777777899999999997 77775 4788
Q ss_pred CCCCCEEeeeCCCCCCccc--hhccCCCCCceeecccccc
Q 013724 362 LKSLKYLTLNGCSILQRLN--FDIWSILPLVLTTFIYVYK 399 (437)
Q Consensus 362 L~~L~~L~Ls~c~~l~~lP--~~l~~L~~L~~L~~~~~~~ 399 (437)
+++|++|++++|. +..++ ..+..+++|+.|++.+++.
T Consensus 114 l~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 114 LVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred cccccccccccch-hccccccccccCCCccceeecCCCcc
Confidence 9999999999976 45555 4689999999999877543
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=2.9e-10 Score=107.14 Aligned_cols=146 Identities=22% Similarity=0.259 Sum_probs=66.7
Q ss_pred hhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCC--cCccC--CCCCccEEeeeCCCC-CC--CCCC-CCCCC
Q 013724 245 ALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKS--LPAGI--HLEFLKELDLSGCSK-LK--RLPD-ISSAA 316 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~--lp~~~--~l~~L~~L~Ls~n~~-~~--~lp~-l~~l~ 316 (437)
.|+.|++++|..++..........+++|++|++++|..++. +...+ ..++|+.|++++|.. +. .+.. +.+++
T Consensus 96 ~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~ 175 (284)
T d2astb2 96 NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP 175 (284)
T ss_dssp TCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT
T ss_pred CCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccc
Confidence 35555555554443222222233455666666666543321 11111 335566666655421 11 1112 23455
Q ss_pred CCCEEEeeCC-CCc-ccChhhcCCCCCCEEeccCCCCCCC-CccccCCCCCCCEEeeeCCCCCCccchhccCCCCCc
Q 013724 317 NIEEMFLNGT-AIE-ELPSSIECLYKLLHLDLEDCKSLKS-LPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLV 390 (437)
Q Consensus 317 ~L~~L~Ls~n-~l~-~lp~~i~~L~~L~~L~L~~n~~l~~-LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~ 390 (437)
+|++|+|+++ .++ ..+..+..+++|++|+|++|..++. -...++++++|+.|++++|-..+.++.-...+++|+
T Consensus 176 ~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 176 NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE
T ss_pred cccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc
Confidence 6666666553 344 3444555566666666666543332 123345556666666665533333333333344444
No 31
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=8.6e-09 Score=88.21 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=74.1
Q ss_pred ccccccCceEEEeccCCCCCCCcCcc-C-CCCCccEEeeeCCCCCCCCCC-CCCCCCCCEEEeeCCCCcccChhhcCCCC
Q 013724 264 SFSQHLNTLVVLNLRDCKSLKSLPAG-I-HLEFLKELDLSGCSKLKRLPD-ISSAANIEEMFLNGTAIEELPSSIECLYK 340 (437)
Q Consensus 264 ~~~~~l~~L~~L~Ls~n~~l~~lp~~-~-~l~~L~~L~Ls~n~~~~~lp~-l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~ 340 (437)
..+..+++|+.|++.+++.++.++.. + .+++|+.|+|++|.+....|. |..+++|++|+|++|+|+.+|..+....+
T Consensus 25 ~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~ 104 (156)
T d2ifga3 25 HHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS 104 (156)
T ss_dssp TTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC
T ss_pred ccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcccc
Confidence 34556889999999887668888765 4 899999999999875544455 89999999999999999999988776678
Q ss_pred CCEEeccCCCC
Q 013724 341 LLHLDLEDCKS 351 (437)
Q Consensus 341 L~~L~L~~n~~ 351 (437)
|+.|+|++|+.
T Consensus 105 l~~L~L~~Np~ 115 (156)
T d2ifga3 105 LQELVLSGNPL 115 (156)
T ss_dssp CCEEECCSSCC
T ss_pred ccccccCCCcc
Confidence 99999999984
No 32
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=1.4e-08 Score=92.35 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=81.0
Q ss_pred ccccCceEEEeccCCCCCCCcCccC---CCCCccEEeeeCCCCCCCCCC--CCCC-CCCCEEEeeCCCCcccChhhcCCC
Q 013724 266 SQHLNTLVVLNLRDCKSLKSLPAGI---HLEFLKELDLSGCSKLKRLPD--ISSA-ANIEEMFLNGTAIEELPSSIECLY 339 (437)
Q Consensus 266 ~~~l~~L~~L~Ls~n~~l~~lp~~~---~l~~L~~L~Ls~n~~~~~lp~--l~~l-~~L~~L~Ls~n~l~~lp~~i~~L~ 339 (437)
+..+++|+.|++.+|. +...+... .+..|..+...++ .+..++. +..+ ..+..|++++|.++.++..+....
T Consensus 99 ~~~l~~L~~l~l~~~~-l~~~~~~~~~~~l~~l~~~~~~n~-~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~ 176 (242)
T d1xwdc1 99 FQNLPNLQYLLISNTG-IKHLPDVHKIHSLQKVLLDIQDNI-NIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGT 176 (242)
T ss_dssp EECCTTCCEEEEESCC-CCSCCCCTTTCBSSCEEEEEESCT-TCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTC
T ss_pred ccccccccccccchhh-hccccccccccccccccccccccc-ccccccccccccccccceeeecccccccccccccccch
Confidence 3455666666666665 33343322 2333333333332 2333332 4444 378889999999999988777778
Q ss_pred CCCEEeccCCCCCCCCccc-cCCCCCCCEEeeeCCCCCCccch-hccCCCCCceeec
Q 013724 340 KLLHLDLEDCKSLKSLPSG-LCKLKSLKYLTLNGCSILQRLNF-DIWSILPLVLTTF 394 (437)
Q Consensus 340 ~L~~L~L~~n~~l~~LP~~-l~~L~~L~~L~Ls~c~~l~~lP~-~l~~L~~L~~L~~ 394 (437)
++..+....+..++.+|.. +.++++|++|+|++|+ +..+|. .+.++.+|+.+++
T Consensus 177 ~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~-l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 177 QLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR-IHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC-CCCCCSSSCTTCCEEESSSE
T ss_pred hhhccccccccccccccHHHhcCCCCCCEEECCCCc-CCccCHHHHcCCcccccCcC
Confidence 8777765444448889865 7899999999999977 567765 4666666666654
No 33
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.55 E-value=1.3e-07 Score=89.54 Aligned_cols=135 Identities=20% Similarity=0.177 Sum_probs=91.0
Q ss_pred HhhhhhhcccCcccCCCCCCccccccCceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEe
Q 013724 244 NALKEKIISACNIFTKTPNPSFSQHLNTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFL 323 (437)
Q Consensus 244 ~aL~~L~Ls~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~L 323 (437)
..++.|+|+++... ..| . ..++|++|++++|+ ++.+|.. +.+|+.|++++|. +..++.+. ++|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp--~---~~~~L~~L~Ls~N~-l~~lp~~--~~~L~~L~l~~n~-l~~l~~lp--~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLP--E---LPPHLESLVASCNS-LTELPEL--PQSLKSLLVDNNN-LKALSDLP--PLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCC--S---CCTTCSEEECCSSC-CSSCCCC--CTTCCEEECCSSC-CSCCCSCC--TTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCC--C---CCCCCCEEECCCCC-Ccccccc--hhhhhhhhhhhcc-cchhhhhc--cccccccc
Confidence 35677888877543 333 2 24678888998887 7778764 4678888888875 33444432 46889999
Q ss_pred eCCCCcccChhhcCCCCCCEEeccCCCCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCCCCCceeecccc
Q 013724 324 NGTAIEELPSSIECLYKLLHLDLEDCKSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSILPLVLTTFIYV 397 (437)
Q Consensus 324 s~n~l~~lp~~i~~L~~L~~L~L~~n~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L~~L~~L~~~~~ 397 (437)
++|.+..+|. ++.+++|+.|++++|. +...|.. ...+..|.+..+... .+..+..+..++.+.+..+
T Consensus 106 ~~n~l~~lp~-~~~l~~L~~L~l~~~~-~~~~~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n 172 (353)
T d1jl5a_ 106 SNNQLEKLPE-LQNSSFLKIIDVDNNS-LKKLPDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNN 172 (353)
T ss_dssp CSSCCSSCCC-CTTCTTCCEEECCSSC-CSCCCCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSS
T ss_pred cccccccccc-hhhhccceeecccccc-ccccccc---cccccchhhcccccc--ccccccccccceecccccc
Confidence 9998888875 6788899999998877 5555543 345566666654432 2345666777777766543
No 34
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.42 E-value=5.2e-07 Score=85.21 Aligned_cols=105 Identities=24% Similarity=0.290 Sum_probs=79.4
Q ss_pred CceEEEeccCCCCCCCcCccCCCCCccEEeeeCCCCCCCCCCCCCCCCCCEEEeeCCCCcccChhhcCCCCCCEEeccCC
Q 013724 270 NTLVVLNLRDCKSLKSLPAGIHLEFLKELDLSGCSKLKRLPDISSAANIEEMFLNGTAIEELPSSIECLYKLLHLDLEDC 349 (437)
Q Consensus 270 ~~L~~L~Ls~n~~l~~lp~~~~l~~L~~L~Ls~n~~~~~lp~l~~l~~L~~L~Ls~n~l~~lp~~i~~L~~L~~L~L~~n 349 (437)
.+|++|+|++|. ++.+|.. +++|++|+|++|+ +..+|.. +.+|+.|++++|+++.++.- .+.|++|++++|
T Consensus 38 ~~l~~LdLs~~~-L~~lp~~--~~~L~~L~Ls~N~-l~~lp~~--~~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n 108 (353)
T d1jl5a_ 38 RQAHELELNNLG-LSSLPEL--PPHLESLVASCNS-LTELPEL--PQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNN 108 (353)
T ss_dssp HTCSEEECTTSC-CSCCCSC--CTTCSEEECCSSC-CSSCCCC--CTTCCEEECCSSCCSCCCSC---CTTCCEEECCSS
T ss_pred cCCCEEEeCCCC-CCCCCCC--CCCCCEEECCCCC-Ccccccc--hhhhhhhhhhhcccchhhhh---cccccccccccc
Confidence 368899999998 7788864 5789999999875 4577763 45889999999998877642 246999999998
Q ss_pred CCCCCCccccCCCCCCCEEeeeCCCCCCccchhccCC
Q 013724 350 KSLKSLPSGLCKLKSLKYLTLNGCSILQRLNFDIWSI 386 (437)
Q Consensus 350 ~~l~~LP~~l~~L~~L~~L~Ls~c~~l~~lP~~l~~L 386 (437)
. +..+|. ++.+++|++|++++|.. ...|..+..+
T Consensus 109 ~-l~~lp~-~~~l~~L~~L~l~~~~~-~~~~~~~~~l 142 (353)
T d1jl5a_ 109 Q-LEKLPE-LQNSSFLKIIDVDNNSL-KKLPDLPPSL 142 (353)
T ss_dssp C-CSSCCC-CTTCTTCCEEECCSSCC-SCCCCCCTTC
T ss_pred c-cccccc-hhhhccceeeccccccc-cccccccccc
Confidence 8 788885 67899999999988764 4444443333
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.84 E-value=1.4e-06 Score=84.99 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=54.3
Q ss_pred ceEEEeccCCCCCCCc--CccC-CCCCccEEeeeCCCCCC----CCCC-CCCCCCCCEEEeeCCCCcc-----cChhhcC
Q 013724 271 TLVVLNLRDCKSLKSL--PAGI-HLEFLKELDLSGCSKLK----RLPD-ISSAANIEEMFLNGTAIEE-----LPSSIEC 337 (437)
Q Consensus 271 ~L~~L~Ls~n~~l~~l--p~~~-~l~~L~~L~Ls~n~~~~----~lp~-l~~l~~L~~L~Ls~n~l~~-----lp~~i~~ 337 (437)
+|+.|+|++++ ++.. ...+ .+++|++|+|++|.+.. .+.. +..+++|+.|+|++|.|+. +...+..
T Consensus 3 ~l~~ld~~~~~-i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEE-LSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCC-CCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCc-CChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 46666776666 3221 1111 55666677777665331 1122 4556667777777666642 1122221
Q ss_pred -CCCCCEEeccCCCCCCC-----CccccCCCCCCCEEeeeCCC
Q 013724 338 -LYKLLHLDLEDCKSLKS-----LPSGLCKLKSLKYLTLNGCS 374 (437)
Q Consensus 338 -L~~L~~L~L~~n~~l~~-----LP~~l~~L~~L~~L~Ls~c~ 374 (437)
..+|+.|+|++|. ++. ++..+..+++|++|++++|.
T Consensus 82 ~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 82 PSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp TTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred CCCCCCEEECCCCC-ccccccccccchhhcccccccccccccc
Confidence 2356777777665 332 34445666667777776654
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.74 E-value=3.2e-06 Score=80.54 Aligned_cols=183 Identities=15% Similarity=0.065 Sum_probs=115.7
Q ss_pred hhhhhhcccCcccCCCC--CCccccccCceEEEeccCCCCCCCc---------Cc-----cC-CCCCccEEeeeCCCCCC
Q 013724 245 ALKEKIISACNIFTKTP--NPSFSQHLNTLVVLNLRDCKSLKSL---------PA-----GI-HLEFLKELDLSGCSKLK 307 (437)
Q Consensus 245 aL~~L~Ls~~~~~~~~~--~~~~~~~l~~L~~L~Ls~n~~l~~l---------p~-----~~-~l~~L~~L~Ls~n~~~~ 307 (437)
.|+.++|++|....... ....+...++|+.|++++|. ++.. .. .. ..+.|+.|.+++|.+..
T Consensus 94 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 94 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred Ccccccccccccccccccchhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccceeecccccccc
Confidence 47778888775432210 11123456889999999987 3210 00 01 46789999999876432
Q ss_pred C----CCC-CCCCCCCCEEEeeCCCCcc------cChhhcCCCCCCEEeccCCCCC----CCCccccCCCCCCCEEeeeC
Q 013724 308 R----LPD-ISSAANIEEMFLNGTAIEE------LPSSIECLYKLLHLDLEDCKSL----KSLPSGLCKLKSLKYLTLNG 372 (437)
Q Consensus 308 ~----lp~-l~~l~~L~~L~Ls~n~l~~------lp~~i~~L~~L~~L~L~~n~~l----~~LP~~l~~L~~L~~L~Ls~ 372 (437)
. +.. +...++|+.|+|++|.|.. +...+..+++|+.|+|++|... ..+...+..+++|++|+|++
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 1 112 4557889999999999873 3345778899999999998732 12455678899999999999
Q ss_pred CCCCCc----cchhccC--CCCCceeecccccchhhccc--cccC-CCcccccccccCCCCCCcc
Q 013724 373 CSILQR----LNFDIWS--ILPLVLTTFIYVYKFFVETS--AASG-DDWKSAFDAAADGPVKPSQ 428 (437)
Q Consensus 373 c~~l~~----lP~~l~~--L~~L~~L~~~~~~~~~~~~~--~~~~-~~~~~l~~~~~s~~~~~~~ 428 (437)
|..... +-..+.. ...|+.|++.++........ .... ...+.++.+..+++.+..+
T Consensus 253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 986543 3333433 35799999877653211111 1111 1234567777777776543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=3.9e-06 Score=71.50 Aligned_cols=79 Identities=20% Similarity=0.091 Sum_probs=44.9
Q ss_pred CCCCCCEEEeeCCCCcccC---hhhcCCCCCCEEeccCCCCCCCCccc-cCCCCCCCEEeeeCCCCCCccc-------hh
Q 013724 314 SAANIEEMFLNGTAIEELP---SSIECLYKLLHLDLEDCKSLKSLPSG-LCKLKSLKYLTLNGCSILQRLN-------FD 382 (437)
Q Consensus 314 ~l~~L~~L~Ls~n~l~~lp---~~i~~L~~L~~L~L~~n~~l~~LP~~-l~~L~~L~~L~Ls~c~~l~~lP-------~~ 382 (437)
.+++|++|+|++|+|+.++ ..+..+++|+.|+|++|. +.++++. .....+|+.|++.+|+...... ..
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 4566666666666666442 345566677777777666 5555541 1223356667777766554332 22
Q ss_pred ccCCCCCceee
Q 013724 383 IWSILPLVLTT 393 (437)
Q Consensus 383 l~~L~~L~~L~ 393 (437)
+..+++|+.|+
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 45566666665
No 38
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.63 E-value=5.5e-06 Score=80.51 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=78.6
Q ss_pred CCccEEeeeCCCCCCC-CCC-CCCCCCCCEEEeeCCCCc-----ccChhhcCCCCCCEEeccCCCCCCC-----CccccC
Q 013724 293 EFLKELDLSGCSKLKR-LPD-ISSAANIEEMFLNGTAIE-----ELPSSIECLYKLLHLDLEDCKSLKS-----LPSGLC 360 (437)
Q Consensus 293 ~~L~~L~Ls~n~~~~~-lp~-l~~l~~L~~L~Ls~n~l~-----~lp~~i~~L~~L~~L~L~~n~~l~~-----LP~~l~ 360 (437)
.+|+.|+++++++... +.. +..+++|+.|+|++|.|+ .+...+..+++|+.|+|++|. ++. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTC
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHHHHHHHh
Confidence 3689999998875442 122 566889999999999987 345667899999999999987 542 233332
Q ss_pred -CCCCCCEEeeeCCCCCCc----cchhccCCCCCceeeccccc
Q 013724 361 -KLKSLKYLTLNGCSILQR----LNFDIWSILPLVLTTFIYVY 398 (437)
Q Consensus 361 -~L~~L~~L~Ls~c~~l~~----lP~~l~~L~~L~~L~~~~~~ 398 (437)
...+|++|++++|..... ++..+..+++|+.|++.++.
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred cCCCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 235799999999975432 56778889999999987654
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.57 E-value=8.9e-06 Score=69.16 Aligned_cols=79 Identities=18% Similarity=0.143 Sum_probs=57.4
Q ss_pred CCCCccEEeeeCCCCCCC--CCC-CCCCCCCCEEEeeCCCCcccCh-hhcCCCCCCEEeccCCCCCCCCcc-------cc
Q 013724 291 HLEFLKELDLSGCSKLKR--LPD-ISSAANIEEMFLNGTAIEELPS-SIECLYKLLHLDLEDCKSLKSLPS-------GL 359 (437)
Q Consensus 291 ~l~~L~~L~Ls~n~~~~~--lp~-l~~l~~L~~L~Ls~n~l~~lp~-~i~~L~~L~~L~L~~n~~l~~LP~-------~l 359 (437)
.+++|++|+|++|.+... ++. +..+++|+.|+|++|.|+.+++ ......+|+.|++.+|+....... .+
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~ 142 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR 142 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHH
Confidence 678899999999875432 223 5568999999999999998765 233445789999999985443332 25
Q ss_pred CCCCCCCEEe
Q 013724 360 CKLKSLKYLT 369 (437)
Q Consensus 360 ~~L~~L~~L~ 369 (437)
..+++|+.||
T Consensus 143 ~~~P~L~~LD 152 (162)
T d1koha1 143 ERFPKLLRLD 152 (162)
T ss_dssp TTSTTCCEET
T ss_pred HHCCCCCEEC
Confidence 6789999886
No 40
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.48 E-value=1.9e-05 Score=74.92 Aligned_cols=126 Identities=15% Similarity=0.159 Sum_probs=82.2
Q ss_pred cCceEEEeccCCCCCCC-----cCccC-CCCCccEEeeeCCCCCCC-----CCC-CCCCCCCCEEEeeCCCCc-----cc
Q 013724 269 LNTLVVLNLRDCKSLKS-----LPAGI-HLEFLKELDLSGCSKLKR-----LPD-ISSAANIEEMFLNGTAIE-----EL 331 (437)
Q Consensus 269 l~~L~~L~Ls~n~~l~~-----lp~~~-~l~~L~~L~Ls~n~~~~~-----lp~-l~~l~~L~~L~Ls~n~l~-----~l 331 (437)
.+.|+.|.+++|. ++. +...+ .++.|+.|+|++|.+... +.. +..+++|+.|+|++|.+. .+
T Consensus 157 ~~~L~~l~l~~n~-i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 157 APPLRSIICGRNR-LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp CCCCCEEECCSSC-CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred Ccccceeeccccc-ccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 4577888888876 332 11222 567888999988865421 222 667788999999988876 24
Q ss_pred ChhhcCCCCCCEEeccCCCCCCC-----CccccC--CCCCCCEEeeeCCCCCC----ccchhcc-CCCCCceeeccc
Q 013724 332 PSSIECLYKLLHLDLEDCKSLKS-----LPSGLC--KLKSLKYLTLNGCSILQ----RLNFDIW-SILPLVLTTFIY 396 (437)
Q Consensus 332 p~~i~~L~~L~~L~L~~n~~l~~-----LP~~l~--~L~~L~~L~Ls~c~~l~----~lP~~l~-~L~~L~~L~~~~ 396 (437)
...+..+++|+.|+|++|. ++. +-..+. ..+.|++|+|++|.... .+...+. ++++|+.|++.+
T Consensus 236 ~~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~ 311 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 311 (344)
T ss_dssp HHHGGGCTTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred cccccccccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCC
Confidence 4567788889999999887 443 222232 23578899998876432 2444443 567788888644
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.93 E-value=0.00011 Score=62.55 Aligned_cols=82 Identities=11% Similarity=0.199 Sum_probs=38.7
Q ss_pred cCceEEEeccCCCCCCC-----cCccC-CCCCccEEeeeCCCCCCC----CCC-CCCCCCCCEEEeeCCCCcc-----cC
Q 013724 269 LNTLVVLNLRDCKSLKS-----LPAGI-HLEFLKELDLSGCSKLKR----LPD-ISSAANIEEMFLNGTAIEE-----LP 332 (437)
Q Consensus 269 l~~L~~L~Ls~n~~l~~-----lp~~~-~l~~L~~L~Ls~n~~~~~----lp~-l~~l~~L~~L~Ls~n~l~~-----lp 332 (437)
.++|+.|+|++++.++. +-..+ ..+.|+.|+|++|.+... +.. +...+.|+.|+|++|.|.. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 35677777765432321 00111 345566666666543211 111 2334556666666655551 22
Q ss_pred hhhcCCCCCCEEeccCCC
Q 013724 333 SSIECLYKLLHLDLEDCK 350 (437)
Q Consensus 333 ~~i~~L~~L~~L~L~~n~ 350 (437)
..+...++|+.|+|++|.
T Consensus 94 ~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHTTTTCCCSEEECCCCS
T ss_pred HHHHhCCcCCEEECCCCc
Confidence 334445556666665543
No 42
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.92 E-value=0.00029 Score=59.71 Aligned_cols=105 Identities=20% Similarity=0.183 Sum_probs=75.0
Q ss_pred CCCCccEEeeeCCCCCCC--CC----CCCCCCCCCEEEeeCCCCc-----ccChhhcCCCCCCEEeccCCCCCCC-----
Q 013724 291 HLEFLKELDLSGCSKLKR--LP----DISSAANIEEMFLNGTAIE-----ELPSSIECLYKLLHLDLEDCKSLKS----- 354 (437)
Q Consensus 291 ~l~~L~~L~Ls~n~~~~~--lp----~l~~l~~L~~L~Ls~n~l~-----~lp~~i~~L~~L~~L~L~~n~~l~~----- 354 (437)
..+.|+.|+|++++.++. +. .+...++|+.|+|++|.+. .+...+...+.|+.|+|++|. ++.
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~-i~~~g~~~ 91 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF-LTPELLAR 91 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB-CCHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh-cchHHHHH
Confidence 457899999997654432 11 2667788999999999987 233456677899999999997 543
Q ss_pred CccccCCCCCCCEEeeeCCCC--CC-----ccchhccCCCCCceeeccc
Q 013724 355 LPSGLCKLKSLKYLTLNGCSI--LQ-----RLNFDIWSILPLVLTTFIY 396 (437)
Q Consensus 355 LP~~l~~L~~L~~L~Ls~c~~--l~-----~lP~~l~~L~~L~~L~~~~ 396 (437)
+-..+...++|++|+|++|.. ++ .+...+..-++|+.|++..
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcC
Confidence 334577888999999988742 22 2455566668888887644
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.08 E-value=0.0018 Score=54.32 Aligned_cols=10 Identities=30% Similarity=0.381 Sum_probs=5.6
Q ss_pred CceEEEeccC
Q 013724 270 NTLVVLNLRD 279 (437)
Q Consensus 270 ~~L~~L~Ls~ 279 (437)
+.|++|+|++
T Consensus 17 ~~L~~L~L~~ 26 (166)
T d1io0a_ 17 PDLEEVNLNN 26 (166)
T ss_dssp TTCCEEECTT
T ss_pred CCCcEEEcCC
Confidence 4555566554
No 44
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.98 E-value=0.00072 Score=56.86 Aligned_cols=106 Identities=16% Similarity=0.144 Sum_probs=68.7
Q ss_pred CCCCccEEeeeCCCCCCCC-----CC-CCCCCCCCEEEeeCCCCc-----ccChhhcCCCCCCEEeccCCCCCC----CC
Q 013724 291 HLEFLKELDLSGCSKLKRL-----PD-ISSAANIEEMFLNGTAIE-----ELPSSIECLYKLLHLDLEDCKSLK----SL 355 (437)
Q Consensus 291 ~l~~L~~L~Ls~n~~~~~l-----p~-l~~l~~L~~L~Ls~n~l~-----~lp~~i~~L~~L~~L~L~~n~~l~----~L 355 (437)
..+.|+.|+|++++.++.- -. +...++|+.|+|++|.+. .+-..+...++|+.|++++|.... .+
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 4578888888875434321 11 556788888999888876 233456667888888888877321 13
Q ss_pred ccccCCCCCCCEEeeeCCC-CCC-----ccchhccCCCCCceeeccc
Q 013724 356 PSGLCKLKSLKYLTLNGCS-ILQ-----RLNFDIWSILPLVLTTFIY 396 (437)
Q Consensus 356 P~~l~~L~~L~~L~Ls~c~-~l~-----~lP~~l~~L~~L~~L~~~~ 396 (437)
-..+...++|+.++|+.|. .++ .+...+...++|+.|++..
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcC
Confidence 3456777888877775432 333 2555566778888887643
No 45
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=70.19 E-value=3.4 Score=30.09 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=44.9
Q ss_pred CCceeeccCCCcccCchHHHHHHHHhcCCceEEe-cCCCchHHHHHHHHHhcceEEEEecC
Q 013724 117 YEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI-NRGDEISQSLVDAIEASAISLIIFSE 176 (437)
Q Consensus 117 ~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~-~~g~~i~~~l~~~i~~S~~~i~i~S~ 176 (437)
+.+|||..-|++. ..++-.|+..|+..||.+.+ ..+..+...+.+|-..---+++|+-+
T Consensus 3 ~~~V~i~~~g~~~-~~~~~~l~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~~~~iiiG~ 62 (97)
T d1wu7a1 3 KKSVYICRVGKIN-SSIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAIGADFAVIFGE 62 (97)
T ss_dssp SCEEEEEEESSCC-HHHHHHHHHHHHTTTCEEEECCSCCCHHHHHHHHHHTTCSEEEEEEH
T ss_pred CceEEEEEeCHHH-HHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhcCCCeEEecCC
Confidence 5699999999988 47888999999999999988 56677887888875533333444443
No 46
>d1pd3a_ a.30.3.1 (A:) Nonstructural protein ns2, Nep, M1-binding domain {Influenza A virus [TaxId: 11320]}
Probab=62.96 E-value=1.4 Score=27.75 Aligned_cols=16 Identities=44% Similarity=0.769 Sum_probs=13.1
Q ss_pred HHHHHHhhHhhhccCC
Q 013724 22 EEELRWMSQEVRESSP 37 (437)
Q Consensus 22 ~~~~~~~~~~~~~~~~ 37 (437)
-||.||+-.|||---.
T Consensus 11 feeirwlieevrh~lk 26 (54)
T d1pd3a_ 11 FEEIRWLIEEVRHRLK 26 (54)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4899999999997433
No 47
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=46.22 E-value=17 Score=26.68 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=44.5
Q ss_pred CCceeeccCCCcccCchHHHHHHHHhcCCceEEe-cCCCchHHHHHHHHHhcceEEEEecCc
Q 013724 117 YEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI-NRGDEISQSLVDAIEASAISLIIFSEG 177 (437)
Q Consensus 117 ~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~-~~g~~i~~~l~~~i~~S~~~i~i~S~~ 177 (437)
.++|+|-=-+++. ..+...|+..|+..||++.+ .++..+...+.+|-..---.++|+.+.
T Consensus 7 P~Qv~iipi~~~~-~~~a~~i~~~Lr~~gi~v~~d~~~~~l~~ki~~a~~~g~p~~iiiG~~ 67 (110)
T d1qf6a1 7 PVQVVIMNITDSQ-SEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDK 67 (110)
T ss_dssp SSCEEEEESSHHH-HHHHHHHHHHHHTTTCCEEEECCSSCHHHHHHHHHHTTCSEEEEECTT
T ss_pred CceEEEEeccHHH-HHHHHHHHHHHHHhhccccccCCccchhHHHHHHHHcCCCEEEEECch
Confidence 5678876556554 47888999999999999998 677788888888765444445555554
No 48
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.31 E-value=20 Score=25.57 Aligned_cols=57 Identities=11% Similarity=0.225 Sum_probs=42.3
Q ss_pred CCCceeeccCCCcccCchHHHHHHHHhcC--CceEEe-cCCCchHHHHHHHHH-hcceEEEE
Q 013724 116 SYEGVPTAIPSEDTRDNFTSHLYSALSQK--SIETFI-NRGDEISQSLVDAIE-ASAISLII 173 (437)
Q Consensus 116 ~~~dvf~sf~g~d~r~~f~~~l~~~L~~~--g~~~~~-~~g~~i~~~l~~~i~-~S~~~i~i 173 (437)
..-||||-.-|++. ....-.|...|+.. |+.+.+ ..+..+...+.+|-+ +..+.++|
T Consensus 2 p~vdv~vi~~~~~~-~~~a~~la~~LR~~~~gi~v~~~~~~~~l~kq~k~A~~~~~~~~iii 62 (99)
T d1kmma1 2 PVVDIYLVASGADT-QSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVL 62 (99)
T ss_dssp CSCSEEEECCSTTH-HHHHHHHHHHHHHHSTTCCEEECCSCCCHHHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEEECCHHH-HHHHHHHHHHHHhcCCCeEEEEeCCCCCHHHHHHHHHHhCCChhhhc
Confidence 35699998888887 47777899999886 999988 556788888888755 44444443
No 49
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=40.36 E-value=16 Score=27.02 Aligned_cols=61 Identities=13% Similarity=0.188 Sum_probs=43.9
Q ss_pred CCceeeccCCCcccCchHHHHHHHHhcCCceEEe-cCCCchHHHHHHHHHhcceEEEEecCc
Q 013724 117 YEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI-NRGDEISQSLVDAIEASAISLIIFSEG 177 (437)
Q Consensus 117 ~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~-~~g~~i~~~l~~~i~~S~~~i~i~S~~ 177 (437)
.++|.|---+.|.-..+...|++.|...||.+.+ .+++.+...+.+|-..--=.++|+.++
T Consensus 13 P~qv~iipi~~~~~~~~a~~l~~~Lr~~gi~v~~D~~~~~~g~k~~~a~~~g~p~~iiiG~~ 74 (113)
T d1nyra1 13 PKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDK 74 (113)
T ss_dssp SSCEEEEESSHHHHHHHHHHHHHHHHTTTCCEEECCSSCCHHHHHHHHHHHTCSEEEEECHH
T ss_pred CceEEEEEeCcHHHhhhHHHHHHHhhhhccceeecccccccchHHHHHHHhCceEEEEEccc
Confidence 5677776667665446888999999999999988 667778777777655433345555554
No 50
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]}
Probab=37.26 E-value=38 Score=27.20 Aligned_cols=48 Identities=19% Similarity=0.332 Sum_probs=38.3
Q ss_pred CchHHHHHHHHhcCCceEEecCCCchHHHHHHHHHhcceEEEEecCcc
Q 013724 131 DNFTSHLYSALSQKSIETFINRGDEISQSLVDAIEASAISLIIFSEGY 178 (437)
Q Consensus 131 ~~f~~~l~~~L~~~g~~~~~~~g~~i~~~l~~~i~~S~~~i~i~S~~~ 178 (437)
..||-.|+..|++.|..+.+-+.+.-.+...+.|+......+++|+.-
T Consensus 10 DSFt~ni~~~l~~lG~~~~v~~~~~~~~~~~~~l~~~~~~~iils~Gp 57 (192)
T d1i7qb_ 10 DSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGP 57 (192)
T ss_dssp CSSHHHHHHHHHHTTCEEEEEETTSCHHHHHHHHHHCSSEEEEECCCS
T ss_pred CcHHHHHHHHHHHCCCeEEEEeCCCcccccHHHHHhcCCCeEEecCcc
Confidence 468899999999999998775555555566777888888999999774
No 51
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=35.67 E-value=22 Score=25.08 Aligned_cols=59 Identities=14% Similarity=0.126 Sum_probs=43.5
Q ss_pred CCceeeccCCCcccCchHHHHHHHHhcCCceEEe-cCCCchHHHHHHHHHhcceEEEEecC
Q 013724 117 YEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI-NRGDEISQSLVDAIEASAISLIIFSE 176 (437)
Q Consensus 117 ~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~-~~g~~i~~~l~~~i~~S~~~i~i~S~ 176 (437)
..||||.--|++. ....-.|...|+..|+++.+ ..+..+...+.+|=+.---+++|+.+
T Consensus 4 ~~dv~ii~~~~~~-~~~a~~i~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~~~~iiiG~ 63 (95)
T d1qe0a1 4 NLDLFIVTMGDQA-DRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGD 63 (95)
T ss_dssp CCSEEEEECHHHH-HHHHHHHHHHHHTTTCCEEECCSCCCHHHHHHHHHHTTCSEEEEECH
T ss_pred CCeEEEEEeCHHH-HHHHHHHHHHHHHCCCcEEecCCCCCHHHHHHHHHhcCCCEEEEEcc
Confidence 4699998777766 47778999999999999988 66677888888875543334444443
No 52
>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.45 E-value=22 Score=27.49 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=27.1
Q ss_pred CCCceeeccCCCcccCchHHHHHHHHhcCCceEEe
Q 013724 116 SYEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI 150 (437)
Q Consensus 116 ~~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~ 150 (437)
++=-||||.+.+|+ ..|. .+.+.|.+.|++.|-
T Consensus 6 ~~G~v~iSv~d~dK-~~~~-~~ak~l~~lGf~i~A 38 (138)
T d1a9xa2 6 KHGRALLSVREGDK-ERVV-DLAAKLLKQGFELDA 38 (138)
T ss_dssp SSSEEEEECCGGGG-TTHH-HHHHHHHHTTCEEEE
T ss_pred CCCEEEEEEehhhh-hHHH-HHHHHHHHCCCEEEe
Confidence 34479999998886 6777 888889999999876
No 53
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.74 E-value=57 Score=22.75 Aligned_cols=56 Identities=13% Similarity=0.024 Sum_probs=39.7
Q ss_pred CCCceeeccCCCcccCchHHHHHHHHhcCCceEEe-cCCCchHHHHHHHHH-hcceEEEE
Q 013724 116 SYEGVPTAIPSEDTRDNFTSHLYSALSQKSIETFI-NRGDEISQSLVDAIE-ASAISLII 173 (437)
Q Consensus 116 ~~~dvf~sf~g~d~r~~f~~~l~~~L~~~g~~~~~-~~g~~i~~~l~~~i~-~S~~~i~i 173 (437)
+..||||-.-|++. ....-.|...|+ .|+.+.+ ..+..+...+.+|-. +.++.|+|
T Consensus 2 ~~pdv~iv~~~~~~-~~~a~~i~~~LR-~~~~~~~~~~~~~l~kq~k~A~~~~~~~~iii 59 (96)
T d1h4vb1 2 KGPDLYLIPLTEEA-VAEAFYLAEALR-PRLRAEYALAPRKPAKGLEEALKRGAAFAGFL 59 (96)
T ss_dssp CCCSEEEEESSHHH-HHHHHHHHHHHT-TTSCEEECSSCCCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEEEcCHHH-HHHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHHcCCCEEEEe
Confidence 35689997777765 466668899995 6999988 556678878877754 44555554
No 54
>d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.58 E-value=1.4e+02 Score=23.32 Aligned_cols=88 Identities=22% Similarity=0.191 Sum_probs=51.3
Q ss_pred HHHHHHHhcCCceEEecC-CCchHHHHHHHHHhcceEEEEecCccccccccHhhHHhhhhhccccCeEEEeee---ecCC
Q 013724 135 SHLYSALSQKSIETFINR-GDEISQSLVDAIEASAISLIIFSEGYASSRWFFDKLVKILQCKRVYGQIVLPVF---YGVD 210 (437)
Q Consensus 135 ~~l~~~L~~~g~~~~~~~-g~~i~~~l~~~i~~S~~~i~i~S~~~~sS~Wcl~EL~~il~c~~~~~~~vlPiF---y~Vd 210 (437)
..|-+.|+..|+...+.. |+. ...|.+-+++-.+..|.+...|..- -...-.++.+..+..+..+ -.| +-++
T Consensus 56 ~~L~~~L~~~g~~L~v~~~g~~-~~~l~~l~~~~~i~~v~~n~~~~~~--e~~rd~~v~~~l~~~gi~~-~~~~~~~L~~ 131 (185)
T d1u3da2 56 AQLDSSLRSLGTCLITKRSTDS-VASLLDVVKSTGASQIFFNHLYDPL--SLVRDHRAKDVLTAQGIAV-RSFNADLLYE 131 (185)
T ss_dssp HHHHHHHHHTTCCEEEEECSCH-HHHHHHHHHHHTCCEEEEECCCSHH--HHHHHHHHHHHHHTTTCEE-EEECCSCSSC
T ss_pred HHHHHHHHhcCCcceEeeccch-HHHHHHHHHhcCCceEEEeccccHH--HHHHHHHHHHHHHHcCCce-eecCCceecC
Confidence 467778888899887754 554 3456777778888888888887532 2222222322212223222 222 2346
Q ss_pred CCCCCCCCCccCCchh
Q 013724 211 PAPVKWPTGSYGDSFL 226 (437)
Q Consensus 211 pS~Vr~q~gsf~~af~ 226 (437)
|..+....|..-+.|.
T Consensus 132 p~~i~~~~g~~y~vFT 147 (185)
T d1u3da2 132 PWEVTDELGRPFSMFA 147 (185)
T ss_dssp GGGCCCSSSCCCSSHH
T ss_pred ccccccCCCCCCcccH
Confidence 7777777776555554
No 55
>d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
Probab=20.89 E-value=1.6e+02 Score=23.30 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=57.8
Q ss_pred ccCchH----HHHHHHHhcCCceEEecCCCchHHHHHHHHHhcceEEEEecCccccccccHhhHHhhhhhccccCeEEEe
Q 013724 129 TRDNFT----SHLYSALSQKSIETFINRGDEISQSLVDAIEASAISLIIFSEGYASSRWFFDKLVKILQCKRVYGQIVLP 204 (437)
Q Consensus 129 ~r~~f~----~~l~~~L~~~g~~~~~~~g~~i~~~l~~~i~~S~~~i~i~S~~~~sS~Wcl~EL~~il~c~~~~~~~vlP 204 (437)
.|..|. ..|-+.|+..|+..++..|+.. ..|.+-+++-.+..|.++..|. .|-...-..+....+..+..+.-
T Consensus 48 ~r~~fl~~sL~~L~~~L~~~g~~L~i~~G~~~-~~l~~l~~~~~i~~v~~~~~~~--~~~~~rd~~i~~~~~~~~i~~~~ 124 (202)
T d1owla2 48 ARVAYLQGCLQELQQRYQQAGSRLLLLQGDPQ-HLIPQLAQQLQAEAVYWNQDIE--PYGRDRDGQVAAALKTAGIRAVQ 124 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEEEESCHH-HHHHHHHHHTTCSEEEEECCCS--HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHhhhccccceEEEEeeee-ccchhhccccccceeEEeeecc--chhhhHHHHHhhhhhhccccccc
Confidence 344554 4677888889999999888876 3555566667788888888885 23322222232221222222221
Q ss_pred e--eecCCCCCCCCCCCccCCchhhh
Q 013724 205 V--FYGVDPAPVKWPTGSYGDSFLKL 228 (437)
Q Consensus 205 i--Fy~VdpS~Vr~q~gsf~~af~~l 228 (437)
+ -+-++|..+....|..-+.|...
T Consensus 125 ~~~~~L~~p~~v~~~~g~~~~vFTpF 150 (202)
T d1owla2 125 LWDQLLHSPDQILSGSGNPYSVYGPF 150 (202)
T ss_dssp ECCSSSSCTTTCCCTTSCCCSSHHHH
T ss_pred cccccccCcccccCCCCCchhhhHHH
Confidence 1 24556778887777776666433
Done!