BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013726
(437 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/345 (66%), Positives = 258/345 (74%), Gaps = 52/345 (15%)
Query: 106 MAVVESASQDSAVSSAGSIPAS------------NGQDHPKQN-----------GGTMVM 142
MA+VE+AS D +S + +S N QDH N +
Sbjct: 1 MAIVENASVDLGISIGSASSSSSSLDSSVSSASSNDQDHSNHNNSHDHGRSLIENSISIQ 60
Query: 143 P-------------LDQGLYNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLA 189
P L + ++QRS+GGGD +RD+RELQELFSKLNPMAEEFVPPSLA
Sbjct: 61 PLYMKAQVQSPPPNLQVAQLHHHHQRSSGGGDLQRDIRELQELFSKLNPMAEEFVPPSLA 120
Query: 190 K---TNNNNHGVNGFNGGFFANNSLIFNNHN--------ARNGNVNANAAVRRKKSFGQG 238
+NN HG+NG N GF+ NN NN++ +RNG +N +AA RRKK++ QG
Sbjct: 121 NNKISNNYIHGLNGLNVGFYTNN----NNYDPAFMLTNASRNGQLNGSAA-RRKKNYNQG 175
Query: 239 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 298
KRR+NSRTS+AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF
Sbjct: 176 KRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 235
Query: 299 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 358
AFIEFT EEGARAALNLAGT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMC RTIYC
Sbjct: 236 AFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYC 295
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM
Sbjct: 296 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 340
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 287 EMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 346
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 347 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 374
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/255 (81%), Positives = 220/255 (86%), Gaps = 19/255 (7%)
Query: 154 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 208
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 268
S NN RNG VN RRK +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHNN--TRNGQVNG----RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 223
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 328
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 224 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 283
Query: 329 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 388
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 284 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 343
Query: 389 DYHHSTRIAFVEFVM 403
DYHHSTRIAFVEF+M
Sbjct: 344 DYHHSTRIAFVEFIM 358
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 305 EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 364
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 365 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 392
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/259 (80%), Positives = 222/259 (85%), Gaps = 18/259 (6%)
Query: 154 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 208
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGXLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 268
S N N RNG VN R+K +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHN--NTRNGQVNGR---RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 224
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 328
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 225 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 284
Query: 329 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 388
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 285 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 344
Query: 389 DYHHSTRIAFVEFVMVIAS 407
DYHHSTRIAFVEF+M+ S
Sbjct: 345 DYHHSTRIAFVEFIMISIS 363
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/255 (81%), Positives = 220/255 (86%), Gaps = 18/255 (7%)
Query: 154 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 208
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 268
S NN RNG VN R+K +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHNN--TRNGQVNGR---RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 224
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 328
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 225 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 284
Query: 329 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 388
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 285 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 344
Query: 389 DYHHSTRIAFVEFVM 403
DYHHSTRIAFVEF+M
Sbjct: 345 DYHHSTRIAFVEFIM 359
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 306 EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 365
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 366 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 393
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/316 (69%), Positives = 241/316 (76%), Gaps = 38/316 (12%)
Query: 106 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 151
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 152 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 208
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 388 GDYHHSTRIAFVEFVM 403
GDYHH TRI FVEFVM
Sbjct: 281 GDYHHPTRIGFVEFVM 296
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R F+EF E A A
Sbjct: 243 EMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIA 302
Query: 312 ALNLAGTMLGFYPVR 326
ALN +G +LG P+R
Sbjct: 303 ALNCSGVLLGSLPIR 317
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 343 PRTE--DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVE 400
PRT E+ RT+Y ++ID++VT+ + F G+V R+ GD + R AF+E
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIE 195
Query: 401 FVMVIASST 409
F + + T
Sbjct: 196 FTDEVGART 204
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/316 (69%), Positives = 241/316 (76%), Gaps = 38/316 (12%)
Query: 106 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 151
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 152 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 208
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 388 GDYHHSTRIAFVEFVM 403
GDYHH TRI FVEFVM
Sbjct: 281 GDYHHPTRIGFVEFVM 296
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R F+EF E A A
Sbjct: 243 EMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIA 302
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
ALN +G +LG P+RV PSKT PV +PR
Sbjct: 303 ALNCSGVLLGSLPIRVSPSKT---PVRSRAIPR 332
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 343 PRTE--DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVE 400
PRT E+ RT+Y ++ID++VT+ + F G+V R+ GD + R AF+E
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIE 195
Query: 401 FVMVIASST 409
F + + T
Sbjct: 196 FTDEVGART 204
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/310 (70%), Positives = 235/310 (75%), Gaps = 26/310 (8%)
Query: 106 MAVVESASQDSAVSSAGSIPA---------SNGQDHPKQNGGTMVMPLDQGLYNQNNQRS 156
MAV+ES ++ V + G I +G +GG + G + RS
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGVSSNNDHGGNEI----HGEIGVHVARS 56
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH 216
+G FKRDMREL EL SKLNPMA+EFVPPSL K VNGFNGGFFA NN
Sbjct: 57 DGDESFKRDMRELHELLSKLNPMAKEFVPPSLTKPV-----VNGFNGGFFA-----VNNG 106
Query: 217 NARNGN--VNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQL 273
GN VN + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQVTEEQL
Sbjct: 107 FGAAGNFPVNEDGGFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQL 166
Query: 274 AALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTA 333
A LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GARAAL+L+GTMLGFYPV+V+PSKTA
Sbjct: 167 AGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARAALSLSGTMLGFYPVKVMPSKTA 226
Query: 334 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
IAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQAD+KLFFESVCGEVYRLRLLGDYHH
Sbjct: 227 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQADIKLFFESVCGEVYRLRLLGDYHHP 286
Query: 394 TRIAFVEFVM 403
TRI FVEFVM
Sbjct: 287 TRIGFVEFVM 296
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R F+EF E A A
Sbjct: 243 EMCARTIYCTNIDKKLTQADIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIA 302
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
ALN +G +LG P+RV PSKT PV +PR
Sbjct: 303 ALNCSGVLLGSLPIRVSPSKT---PVRSRAVPR 332
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/316 (68%), Positives = 240/316 (75%), Gaps = 38/316 (12%)
Query: 106 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 151
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 152 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 208
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDI QQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIYQQ 160
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 388 GDYHHSTRIAFVEFVM 403
GDYHH TRI FVEFVM
Sbjct: 281 GDYHHPTRIGFVEFVM 296
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R F+EF E A
Sbjct: 243 EMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIG 302
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
ALN +G +LG P+RV PSKT PV +PR
Sbjct: 303 ALNCSGVLLGSLPIRVSPSKT---PVRSRAIPR 332
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/299 (72%), Positives = 233/299 (77%), Gaps = 20/299 (6%)
Query: 113 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQ---NNQRSNG---GGDFKRDM 166
SQDS VSS + Q+H + V+ DQGLY++ + RS+G G FKRDM
Sbjct: 33 SQDSGVSS-------DDQNHHSRID--QVLRHDQGLYSKIGSHVARSDGVDGGESFKRDM 83
Query: 167 RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFN--GGFFANNSLIFNNHNARNGNVN 224
RELQELFSKLNPMAEEFVPPSL K N F G FF NN G N
Sbjct: 84 RELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF---AGTGNGGYGN 140
Query: 225 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
N RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVV
Sbjct: 141 ENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 200
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCRICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPR
Sbjct: 201 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
TEDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVM
Sbjct: 261 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVM 319
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 266 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 325
Query: 312 ALNLAGTMLGFYPVR 326
ALN +G +LG P+R
Sbjct: 326 ALNCSGVVLGSLPIR 340
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 231/299 (77%), Gaps = 20/299 (6%)
Query: 113 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQ------NNQRSNGGGDFKRDM 166
SQDS VSS + Q+H + V+ DQGLY++ + +GG FKRDM
Sbjct: 33 SQDSGVSS-------DDQNH--HSRIDQVLRHDQGLYSKIGSHVARSDGVDGGESFKRDM 83
Query: 167 RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFN--GGFFANNSLIFNNHNARNGNVN 224
RELQELFSKLNPMAEEFVPPSL K N F G FF NN + N
Sbjct: 84 RELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGG---YGN 140
Query: 225 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
N RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVV
Sbjct: 141 ENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 200
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCRICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPR
Sbjct: 201 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
TEDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVM
Sbjct: 261 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVM 319
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 266 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 325
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 326 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 353
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/297 (70%), Positives = 225/297 (75%), Gaps = 9/297 (3%)
Query: 113 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQNNQRSNGGGDFKRDMRELQEL 172
SQDS VSS S + + G + + G + + +GG FKRDMRELQEL
Sbjct: 33 SQDSGVSSDDQNHHSRIDQVLRHDQGDVGLYSKIGSHVARSDGVDGGESFKRDMRELQEL 92
Query: 173 FSKLNPMAEEFVPPSLAKTNNNNHGVNGFN------GGFFANNSLIFNNHNARNGNVNAN 226
FSKLNPMAEEFVPPSL K N G FF NN + G N N
Sbjct: 93 FSKLNPMAEEFVPPSLTKQGGNGGLNGVNGGFFTSAGSFFRNNGF---SGTGNGGYGNEN 149
Query: 227 AAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDC 286
RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVVDC
Sbjct: 150 GGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDC 209
Query: 287 RICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
RICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPRTE
Sbjct: 210 RICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTE 269
Query: 347 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
DEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVM
Sbjct: 270 DEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVM 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 273 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 332
Query: 312 ALNLAGTMLGFYPVR 326
ALN +G +LG P+R
Sbjct: 333 ALNCSGVVLGSLPIR 347
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/332 (62%), Positives = 239/332 (71%), Gaps = 42/332 (12%)
Query: 106 MAVVESASQDSAVSSAGSIPASN---GQDHPKQ------------NGGTMVMPLDQGLYN 150
MAVVE+A SSA S A GQ P N +++P D+ Y+
Sbjct: 1 MAVVENAGNKVGSSSANSESADTNDFGQSQPSNHTVMQNLQQKNTNSKPILLPNDENYYS 60
Query: 151 QN------NQRSNGG------GDFKRD------MRELQELFSKLNPMAEEFVPPSLAKTN 192
Q SNG G F RD +R+L++L SKLNPMAEEFVPPSLA
Sbjct: 61 QKIPQFQQKAGSNGVAKIQMVGSFGRDREDGGDIRDLEDLLSKLNPMAEEFVPPSLA--- 117
Query: 193 NNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQRE 252
N HG + + NN ++ N GN N NA R++ ++ Q KRR+NSRTS+AQRE
Sbjct: 118 -NGHGWSAGAAFGYTNNFVLQANF----GNANGNAGRRKRNNYNQ-KRRINSRTSMAQRE 171
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E+I+RTVYVSDIDQQVTEE LAALF+ CGQVVDCRICGDPNSVLRFAF+EFTDEEGARAA
Sbjct: 172 EVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 231
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L+LAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQA+VKL
Sbjct: 232 LSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQAEVKL 291
Query: 373 FFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
FFES+CGEV+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 292 FFESICGEVHRLRLLGDYHHSTRIAFVEFVMA 323
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ ++ F CG+V R+ GD + R AF+EF E A A
Sbjct: 269 EMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIA 328
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 329 ALNCSGAILGSLPIRVSPSKTPVRPRAP 356
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/287 (67%), Positives = 224/287 (78%), Gaps = 16/287 (5%)
Query: 122 GSIPASNGQDHPKQNGGTMVMPLDQGLYNQNNQRS--NGGGDFKRDMRELQELFSKLNPM 179
G++P NG K G ++ Y N S NGG FKRDMR+L+EL SKLNPM
Sbjct: 57 GTMPVPNGNFSYKHANG-----VNNDGYGMNGVMSEENGGESFKRDMRDLEELLSKLNPM 111
Query: 180 AEEFVPPSLAKTNNNNHGV-NGFNGGF-FANNSLIFNNHNARNGNVNANAAVRRKKSFGQ 237
AEEFVPPSLA N HG+ G N GF + NN ++ NN+ NG N RRK +
Sbjct: 112 AEEFVPPSLA----NTHGLLAGPNAGFGYTNNFILPNNYGNTNGQTNNR---RRKNGYNP 164
Query: 238 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 297
GKRRMN + + +REE+IRRTVYVSDIDQ VTEEQLAALF+ CGQVVDCR+CGDPNS+LR
Sbjct: 165 GKRRMNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILR 224
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 357
FAFIEFTD+EGARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC+RTIY
Sbjct: 225 FAFIEFTDDEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 284
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
CTNIDKK+TQADVK FFES+CGEV+RLRLLGDYHHSTRIAFVEF +
Sbjct: 285 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALA 331
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 277 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIA 336
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
AL+ +G +LG P+RV PSKT
Sbjct: 337 ALSCSGVILGSLPIRVSPSKT 357
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/250 (73%), Positives = 211/250 (84%), Gaps = 9/250 (3%)
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGF-FANNSLIFN 214
NGG FKRDMR+L+EL SKLNPMAEEFVPPSLA N HG + G N GF + NN ++
Sbjct: 89 NGGESFKRDMRDLEELLSKLNPMAEEFVPPSLA----NTHGFLAGPNAGFGYTNNIILPT 144
Query: 215 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
N+ NG N RRK + GKRRMN++ + +REE+IRRTVYVSDIDQ VTEEQLA
Sbjct: 145 NYGNTNGQTNNR---RRKNGYNPGKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLA 201
Query: 275 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
ALF+ CGQVVDCR+CGDPNS+LRFAF+EFTDEEGARAAL+L+GTMLG+YP+RVLPSKTAI
Sbjct: 202 ALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAI 261
Query: 335 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 394
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDYHHST
Sbjct: 262 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHST 321
Query: 395 RIAFVEFVMV 404
RIAFVEF +
Sbjct: 322 RIAFVEFALA 331
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 277 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIA 336
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
AL+ +G +LG P+RV PSKT
Sbjct: 337 ALSCSGVILGSLPIRVSPSKT 357
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/255 (73%), Positives = 208/255 (81%), Gaps = 10/255 (3%)
Query: 165 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 224
DM +L E+ S LNPMA+EFVPPSL NNHG G NG + NN N GN
Sbjct: 117 DMSDLVEILSNLNPMAKEFVPPSLV----NNHGYLG-NGFGYTNNFPAQTNP----GNAI 167
Query: 225 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
N R+K SF QG+RRMN+RTS+AQRE++IRRTVYVSDIDQQVTEEQLA LFV CGQVV
Sbjct: 168 GNTIKRKKNSFNQGRRRMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCGQVV 227
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCRICGDPNSVLRFAFIEFTDEEGARAALNL+GT+LGFYP+RVLPSKTAIAPVNPTFLPR
Sbjct: 228 DCRICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTFLPR 287
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+EDEREMCART+YCTNIDKKVTQADV+LFFES CGEV RLRLLGDYHHSTRIAFVEF V
Sbjct: 288 SEDEREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFT-V 346
Query: 405 IASSTLFIHTEFYIL 419
S+ L ++ +L
Sbjct: 347 AESAILALNCSGAVL 361
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++VT+ + F CG+V R+ GD + R AF+EFT E A
Sbjct: 293 EMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFTVAESAIL 352
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 353 ALNCSGAVLGSLPIRVSPSKTPVRPRIP 380
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/248 (72%), Positives = 204/248 (82%), Gaps = 4/248 (1%)
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH 216
N G FKRDMR+L+EL SKLNPMAEEFVPPSL+ T+ G G + NN ++ NN
Sbjct: 97 NEGESFKRDMRDLEELLSKLNPMAEEFVPPSLSNTHGYLAGPGAGAGFGYPNNFILLNNF 156
Query: 217 NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAAL 276
GN N RRK + QGKRR+N + + +REE+ RRTVYVSDIDQ VTEEQLAAL
Sbjct: 157 ----GNANGQTNRRRKNGYNQGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAAL 212
Query: 277 FVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAP 336
F+ CGQVVDCR+CGDPNS+LRFAFIEFTDEEGARAALNL+GTMLG+YP+RVLPSKTAIAP
Sbjct: 213 FLNCGQVVDCRVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIAP 272
Query: 337 VNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 396
VNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV RLRLLGDYHHSTRI
Sbjct: 273 VNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRI 332
Query: 397 AFVEFVMV 404
AFVEF +
Sbjct: 333 AFVEFTVA 340
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EFT E A A
Sbjct: 286 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIA 345
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL+ +G +LG P+RV PSKT +
Sbjct: 346 ALSCSGVILGSLPIRVSPSKTPV 368
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/254 (70%), Positives = 210/254 (82%), Gaps = 8/254 (3%)
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF-FANNSLIFNN 215
NGG FKR+MR+L+EL SKLNPMAEEFVPPSL TNN+ + G GF + NN ++ NN
Sbjct: 96 NGGESFKREMRDLEELLSKLNPMAEEFVPPSL--TNNHGYLAAGPAAGFGYPNNFILLNN 153
Query: 216 HNARNGNVNANAAVRRKKSFG-QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
+ NG N RRK + GKRR N + + +REE+IRRTVYVSDIDQ VTEEQLA
Sbjct: 154 YANANGQTNR----RRKNGYTTNGKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLA 209
Query: 275 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+LF+ CGQVVDCR+CGDPNS+LRFAFIEFTDEE ARAA++L+GTMLG+YP+RVLPSKTAI
Sbjct: 210 SLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAI 269
Query: 335 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 394
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDY HST
Sbjct: 270 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHST 329
Query: 395 RIAFVEFVMVIASS 408
RIAFVEF ++ +S
Sbjct: 330 RIAFVEFAVIFFAS 343
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFT------- 304
E+ RT+Y ++ID+++T+ + F CG+V R+ GD R AF+EF
Sbjct: 285 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVIFFASF 344
Query: 305 -DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
E A AAL+ +G +LG P+RV PSKT PV PR+
Sbjct: 345 FQAESAIAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 383
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 206/262 (78%), Gaps = 20/262 (7%)
Query: 153 NQRSNG------GGD-FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF 205
NQR NG GGD FKRDMR+L+EL SKLNPMAEEFVPPSLAK + G+
Sbjct: 114 NQRPNGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS----------GY 163
Query: 206 FANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVS 262
F L + N + N N + R+K F QG+RRMN++ + +R+E+ RRTVYVS
Sbjct: 164 FTGAGLGYTNDFLLQPNSVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVS 223
Query: 263 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 322
DIDQQVTEE LA +F CG+VVDCRICGDPNS+L FAFIEFTDEEGARA+LNL+GT+LGF
Sbjct: 224 DIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGF 283
Query: 323 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 382
YPVRVLPSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKKVTQA+VKLFFES+CGEV
Sbjct: 284 YPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQ 343
Query: 383 RLRLLGDYHHSTRIAFVEFVMV 404
RLRLLGDYHHSTRIAFVEF M
Sbjct: 344 RLRLLGDYHHSTRIAFVEFTMA 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ ++ F CG+V R+ GD + R AF+EFT E A A
Sbjct: 311 EMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIA 370
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 371 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 398
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/250 (70%), Positives = 205/250 (82%), Gaps = 8/250 (3%)
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF-FANNSLIFNN 215
NGG FKR+MR+L+EL SKLNPMAEEFVPPSL TNN+ + G GF + NN ++ NN
Sbjct: 96 NGGESFKREMRDLEELLSKLNPMAEEFVPPSL--TNNHGYLAAGPAAGFGYPNNFILLNN 153
Query: 216 HNARNGNVNANAAVRRKKSFG-QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
+ NG N RRK + GKRR N + + +REE+IRRTVY SDIDQ VTEEQLA
Sbjct: 154 YANANGQTNR----RRKNGYTTNGKRRANHKVDMEKREEMIRRTVYASDIDQLVTEEQLA 209
Query: 275 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+LF+ CGQVVDCR+C DPNS+LRFAFIEFTDEE ARAA++L+GTMLG+YP+RVLPSKTAI
Sbjct: 210 SLFLNCGQVVDCRVCRDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAI 269
Query: 335 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 394
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDY HST
Sbjct: 270 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHST 329
Query: 395 RIAFVEFVMV 404
RIAFVEF +
Sbjct: 330 RIAFVEFAVA 339
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 285 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIA 344
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
AL+ +G +LG P+RV PSKT PV PR+
Sbjct: 345 ALSCSGVILGALPIRVSPSKT---PVRARSSPRS 375
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 206/262 (78%), Gaps = 20/262 (7%)
Query: 153 NQRSNG------GGD-FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF 205
NQR NG GGD FKRDMR+L+EL SKLNPMAEEFVPPSLAK + G+
Sbjct: 27 NQRPNGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS----------GY 76
Query: 206 FANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVS 262
F L + N + N N + R+K F QG+RRMN++ + +R+E+ RRTVYVS
Sbjct: 77 FTGAGLGYTNDFLLQPNSVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVS 136
Query: 263 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 322
DIDQQVTEE LA +F CG+VVDCRICGDPNS+L FAFIEFTDEEGARA+LNL+GT+LGF
Sbjct: 137 DIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGF 196
Query: 323 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 382
YPVRVLPSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKKVTQA+VKLFFES+CGEV
Sbjct: 197 YPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQ 256
Query: 383 RLRLLGDYHHSTRIAFVEFVMV 404
RLRLLGDYHHSTRIAFVEF M
Sbjct: 257 RLRLLGDYHHSTRIAFVEFTMA 278
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ ++ F CG+V R+ GD + R AF+EFT E A A
Sbjct: 224 EMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIA 283
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 284 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 311
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 184/287 (64%), Positives = 216/287 (75%), Gaps = 21/287 (7%)
Query: 133 PKQNGGTMVMPLDQ----GLYNQ---NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVP 185
P N G + + Q G+ NQ + NGG FKR+MR+L+EL SKLNPMAEEFVP
Sbjct: 64 PNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNGGESFKREMRDLEELLSKLNPMAEEFVP 123
Query: 186 PSLAKTNNNNHGVNGFNGGF-FANNSLIFNNHNARN--------GNVNANAAVRRKKSFG 236
PSL TN + + G N GF + NN+ + N+ G +N RRK +
Sbjct: 124 PSLV-TNYHGYLAAGPNAGFGYPNNNFMLQNNFGNANANATANNGQINR----RRKNGYN 178
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 296
KRR+ + + +REE+IRRTVYVSDIDQQVTEEQLAALF+ CGQVVDCR+CGDPNS+L
Sbjct: 179 NAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDPNSIL 238
Query: 297 RFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 356
RFAF+EFTDE GARAALNL+GTMLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC RTI
Sbjct: 239 RFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCTRTI 298
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
YCTN+DKK+TQADVK FFES+CGEV RLRLLGDYHHSTRIAFVEF +
Sbjct: 299 YCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAV 345
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+++T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 292 EMCTRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIA 351
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL+ +G +LG P+RV PSKT +
Sbjct: 352 ALSCSGVVLGSLPIRVSPSKTPV 374
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/248 (71%), Positives = 198/248 (79%), Gaps = 5/248 (2%)
Query: 159 GGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG---VNGFNGGFFANNSLIFNN 215
G +R+MR+L++L SKLNPMAEEFVPPSLA + + + F A + L
Sbjct: 18 GDAGEREMRDLEDLLSKLNPMAEEFVPPSLAAASPTAYAYYPTPTPSHVFPAVDGL--AG 75
Query: 216 HNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAA 275
R GKRRMNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAA
Sbjct: 76 PRPRKKGGGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAA 135
Query: 276 LFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIA 335
LF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIA
Sbjct: 136 LFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIA 195
Query: 336 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR 395
PVNPTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTR
Sbjct: 196 PVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTR 255
Query: 396 IAFVEFVM 403
IAFVEFVM
Sbjct: 256 IAFVEFVM 263
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 210 EMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATA 269
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 270 ALNCSGVILGSLPIRVSPSKTPVRPRAP 297
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/252 (73%), Positives = 211/252 (83%), Gaps = 10/252 (3%)
Query: 152 NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSL 211
++QR+ G DM +L E+ SKLNPMAEEFVPPSLA N+ G G GF ANN L
Sbjct: 13 HHQRAKSNG--VNDMNDLVEMLSKLNPMAEEFVPPSLA----NHPGFFGNGFGFNANNFL 66
Query: 212 IFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEE 271
+ N+ NG N R+K S+ QG+RRMN+RTS+AQR+EII+RTVYVSDIDQQVTEE
Sbjct: 67 VQINNGIANGQTNR----RKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQVTEE 122
Query: 272 QLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK 331
QLA LF+ CGQVVDCRICGDPNSVLRFAF+EFTDEEGAR AL+L+GT+LGFYP+RVLPSK
Sbjct: 123 QLAGLFIHCGQVVDCRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSK 182
Query: 332 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 391
TAIAPVNPTFLPR+EDEREMCART+YCTNIDKK+TQADV+LFFES CGEV+RLRLLGDYH
Sbjct: 183 TAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYH 242
Query: 392 HSTRIAFVEFVM 403
HSTRIAFVEF +
Sbjct: 243 HSTRIAFVEFAV 254
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID+++T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 201 EMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVAESAIA 260
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
ALN +G +LG P+RV PSKT
Sbjct: 261 ALNCSGAVLGSLPIRVSPSKT 281
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/252 (70%), Positives = 201/252 (79%), Gaps = 14/252 (5%)
Query: 158 GGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG------VNGFNGGFFANNSL 211
GG FKRDMR+L+EL SKLNPMAEEFVPPSL N HG G + NN +
Sbjct: 9 GGESFKRDMRDLEELLSKLNPMAEEFVPPSLT----NTHGYLPGPGAGAGAGFGYPNNFI 64
Query: 212 IFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEE 271
+ NN NG N RRK + GKRR+N + + +REE+IRRTVYVSDIDQ VTEE
Sbjct: 65 LLNNFGDANGQTNR----RRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEE 120
Query: 272 QLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK 331
QLA LF+ CGQVVD R+CGDPNS+LRFAF+EFTDE+GARAALNL+GTMLG+YP+RVLPSK
Sbjct: 121 QLAGLFLNCGQVVDYRVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSK 180
Query: 332 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 391
TAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV RLRLLGDYH
Sbjct: 181 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYH 240
Query: 392 HSTRIAFVEFVM 403
HSTRIAFVEF +
Sbjct: 241 HSTRIAFVEFTV 252
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EFT E A A
Sbjct: 199 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIA 258
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL+ +G +LG P+RV PSKT +
Sbjct: 259 ALSCSGVILGSLPIRVSPSKTPV 281
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/245 (71%), Positives = 196/245 (80%), Gaps = 24/245 (9%)
Query: 159 GGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNA 218
G +R+MR+L++L SKLNPMAEEFVPPSLA + + S +F +A
Sbjct: 18 GDAGEREMRDLEDLLSKLNPMAEEFVPPSLAAASPTAYAYYPT-----PTPSHVFPAGHA 72
Query: 219 RNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFV 278
GKRRMN RTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+
Sbjct: 73 -------------------GKRRMNRRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFI 113
Query: 279 GCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
CGQVVDCR+CGDPNSVLRFAFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVN
Sbjct: 114 NCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVN 173
Query: 339 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 398
PTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAF
Sbjct: 174 PTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAF 233
Query: 399 VEFVM 403
VEFVM
Sbjct: 234 VEFVM 238
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 185 EMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATA 244
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 245 ALNCSGVILGSLPIRVSPSKTPVRPRAP 272
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 186/282 (65%), Positives = 211/282 (74%), Gaps = 30/282 (10%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN-------------NHGVNGFNGGFFANN 209
+R+MR+L+EL SKLNPMAEEFVPPSLA + N G GGF A+
Sbjct: 28 EREMRDLEELLSKLNPMAEEFVPPSLATAPHPTAAGYAAAAGYYPNPSAGGGRGGFVASP 87
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQ------------GKRRMNSRTSLAQREEIIRR 257
+ H G A A R +K FG GKRR+NSRTS AQR+E+IRR
Sbjct: 88 A----AHRGVVGFPAAPADGRGRKKFGGYAGAGPGGYPQGGKRRVNSRTSQAQRDEVIRR 143
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
TVYVSDID QVTEEQLAALF+ GQVVDCR+CGDPNSVLRFAFIEFTDEEGARAAL L+G
Sbjct: 144 TVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSG 203
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
T+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNID+KV+QADVKLFFES+
Sbjct: 204 TVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDRKVSQADVKLFFESI 263
Query: 378 CGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYIL 419
CGEVYRLRLLGDY H+TRIAFVEFVM S+T ++ IL
Sbjct: 264 CGEVYRLRLLGDYQHNTRIAFVEFVMA-ESATAALNCSGVIL 304
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD R AF+EF E A A
Sbjct: 236 EMCARTIYCTNIDRKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESATA 295
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P P L
Sbjct: 296 ALNCSGVILGSLPIRVSPSKTPVRPRAPRPL 326
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/258 (68%), Positives = 203/258 (78%), Gaps = 18/258 (6%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNN-NNHGVNGFNGGFFANNSLIFNNHNARNG 221
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 222 NVNANAAVRRKKSF-------------GQG---KRRMNSRTSLAQREEIIRRTVYVSDID 265
V AV + G G +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 266 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 326 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLR
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLR 271
Query: 386 LLGDYHHSTRIAFVEFVM 403
LLGDYHHSTRIAFVEFVM
Sbjct: 272 LLGDYHHSTRIAFVEFVM 289
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 236 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 295
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 296 ALNCSGVILGSLPIRVSPSKTPVRPRAP 323
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 172/239 (71%), Positives = 192/239 (80%), Gaps = 23/239 (9%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
MREL++L +KLNP+A+EFVPPS A + A + ++
Sbjct: 1 MRELEDLLTKLNPLAKEFVPPSHAD----------------------LASTTAPSSVASS 38
Query: 226 NAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
R+K F Q KRR+NSRTS AQRE+ IRRTVYVSDIDQQVTEEQLAALF+ CGQVV
Sbjct: 39 KGQPRKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVV 98
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 99 DCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPR 158
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
+EDEREMCARTIYCTNIDKKV+QADVKLFFES+CGEV RLRLLGDYHHSTRIAFVEFVM
Sbjct: 159 SEDEREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVM 217
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 164 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 223
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 224 ALNCSGAILGSLPIRVSPSKTPVRPRSP 251
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 176/258 (68%), Positives = 201/258 (77%), Gaps = 18/258 (6%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNN-NNHGVNGFNGGFFANNSLIFNNHNARNG 221
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 222 NVNANAAVRRKKSFGQG----------------KRRMNSRTSLAQREEIIRRTVYVSDID 265
V AV + +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPGRRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 266 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 326 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLR
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLR 271
Query: 386 LLGDYHHSTRIAFVEFVM 403
LLGDYHHSTRIAFVEFVM
Sbjct: 272 LLGDYHHSTRIAFVEFVM 289
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 236 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 295
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 296 ALNCSGVILGSLPIRVSPSKTPVRPRAP 323
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 179/272 (65%), Positives = 201/272 (73%), Gaps = 11/272 (4%)
Query: 158 GGGDFKRDMRELQELFSKLNPMAEEFVPPSLAK----------TNNNNHGVNGFNGGFFA 207
GG +R+MR+L+EL SKLNPMAEEFVPPSLA N GF
Sbjct: 30 GGDAGEREMRDLEELLSKLNPMAEEFVPPSLAAHPMPPPPYAGYYPNGPPAAGFAPVASP 89
Query: 208 NNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
+ + A GKRR+NSRTS AQR+E+IRRTVYVSDID Q
Sbjct: 90 GHRGVVGFPAADGRGRKKFGGGYGGGYPHGGKRRVNSRTSQAQRDEVIRRTVYVSDIDHQ 149
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEEQLAALF+ GQVVDCR+CGDPNSVLRFAFIEFTDEEGARAAL L+GT+LG+YPVRV
Sbjct: 150 VTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLGYYPVRV 209
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
LPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLL
Sbjct: 210 LPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLL 269
Query: 388 GDYHHSTRIAFVEFVMVIASSTLFIHTEFYIL 419
GDY H+TRIAFVEFVM S+T ++ IL
Sbjct: 270 GDYQHNTRIAFVEFVMA-ESATAALNCSGVIL 300
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD R AF+EF E A A
Sbjct: 232 EMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESATA 291
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV P KT + P P
Sbjct: 292 ALNCSGVILGSLPIRVSPFKTPVRPRAP 319
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 199/272 (73%), Gaps = 31/272 (11%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNG------------GFF--AN 208
+R+MR+L++L SKLNPMAEEFVPPSL G G GF+ AN
Sbjct: 38 EREMRDLEDLLSKLNPMAEEFVPPSLTSPVAVAVGAGPGPGPLTPAPLSPAAYGFYPAAN 97
Query: 209 NSLIFNNHNARNGNVN-----------------ANAAVRRKKSFGQGKRRMNSRTSLAQR 251
+ A G V A G+RR NSRTS+AQR
Sbjct: 98 AGFAVASPAAHRGVVGFPAAVADAAHAGRGRKKGGAGGGFGGHGHPGRRRTNSRTSMAQR 157
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E+IRRTVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARA
Sbjct: 158 DEVIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 217
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
ALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+K
Sbjct: 218 ALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLK 277
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
LFFES+CGEV+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 278 LFFESICGEVFRLRLLGDYHHSTRIAFVEFVM 309
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 256 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 315
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 316 ALNCSGVILGSLPIRVSPSKTPVRPRAP 343
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 211/272 (77%), Gaps = 18/272 (6%)
Query: 149 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 208
+N+N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + G F N
Sbjct: 73 FNRNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQS----------GVFRN 117
Query: 209 NSLIFNNHNARNGNVNANAAV-RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
NN A + N R++SFGQGKRR+N RTSLAQ++++IRRTVYVSDIDQQ
Sbjct: 118 GLGFTNNFAAPPKLADGNDHFPTRRRSFGQGKRRINKRTSLAQKDDVIRRTVYVSDIDQQ 177
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++V
Sbjct: 178 VTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKV 237
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
LPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K+FFE +CGEV+RLR L
Sbjct: 238 LPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKVFFEMLCGEVHRLR-L 296
Query: 388 GDYHHSTRIAFVEFVMVIASSTLFIHTEFYIL 419
GDYHH TRIAFVEF M S+ +H +L
Sbjct: 297 GDYHHQTRIAFVEFAMA-ESAIAALHCSGIVL 327
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AF+EF E A A
Sbjct: 260 EMCVRTVYCTNIDKRITQIDLKVFFEMLCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 318
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
AL+ +G +LG P+RV PSKT PV P F PR +
Sbjct: 319 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAD 349
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 212/273 (77%), Gaps = 20/273 (7%)
Query: 149 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNN--NHGVNGFNGGFF 206
++ N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + +G+ GF F
Sbjct: 75 FSGNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRNGL-GFTNNFA 128
Query: 207 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 266
A L N + RR++SFGQGKRRMN RTSLAQ++++IRRTVYVSDIDQ
Sbjct: 129 APPKLADGNDHF----------PRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQ 178
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
QVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++
Sbjct: 179 QVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLK 238
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
VLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE +CGEV+RLR
Sbjct: 239 VLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR- 297
Query: 387 LGDYHHSTRIAFVEFVMVIASSTLFIHTEFYIL 419
LGDYHH TRIAFVEF M S+ +H +L
Sbjct: 298 LGDYHHQTRIAFVEFAMA-ESAIAALHCSGIVL 329
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AF+EF E A A
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 320
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
AL+ +G +LG P+RV PSKT PV P F PR E
Sbjct: 321 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAE 351
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 211/273 (77%), Gaps = 20/273 (7%)
Query: 149 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNN--NHGVNGFNGGFF 206
++ N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + +G+ GF F
Sbjct: 75 FSGNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRNGL-GFTNNFA 128
Query: 207 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 266
A L N + RR++SFGQGKRRMN RTSLAQ++++IRRTVYVSDIDQ
Sbjct: 129 APPKLADGNDHF----------PRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQ 178
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
QVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++
Sbjct: 179 QVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLK 238
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
VLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE CGEV+RLR
Sbjct: 239 VLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMPCGEVHRLR- 297
Query: 387 LGDYHHSTRIAFVEFVMVIASSTLFIHTEFYIL 419
LGDYHH TRIAFVEF M S+ +H +L
Sbjct: 298 LGDYHHQTRIAFVEFAMA-ESAIAALHCSGIVL 329
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AF+EF E A A
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMPCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 320
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
AL+ +G +LG P+RV PSKT PV P F PR E
Sbjct: 321 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAE 351
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 200/266 (75%), Gaps = 25/266 (9%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 206
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 207 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 257
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 378 CGEVYRLRLLGDYHHSTRIAFVEFVM 403
CGEV+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 277 CGEVFRLRLLGDYHHSTRIAFVEFVM 302
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 249 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 308
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P P L
Sbjct: 309 ALNCSGVVLGSLPIRVSPSKTPVRPRVPRHL 339
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 200/267 (74%), Gaps = 25/267 (9%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 206
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 207 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 257
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 378 CGEVYRLRLLGDYHHSTRIAFVEFVMV 404
CGEV+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 277 CGEVFRLRLLGDYHHSTRIAFVEFVMA 303
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 249 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 308
Query: 312 ALNLAGTMLGFYPVRVL 328
ALN +G +LG P+ ++
Sbjct: 309 ALNCSGVVLGSLPISLM 325
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 187/238 (78%), Gaps = 11/238 (4%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
MREL++L KLNP+A+EFVPPS G + + N+ +
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPS--------RGDPALSKELLSKQ---INHQQQQLQQQQP 49
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
R++ + GK+R N+R S AQREE IRRTVYVSDIDQQVTEEQLAALF+ CGQV+D
Sbjct: 50 LQQQRKQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 109
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
CR+CGDPNSVLRFAF+EFTDEEGAR ALNLAGTMLGFYPVRVLPSKTAI PVNPTFLPR+
Sbjct: 110 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 169
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
EDER+MCARTIYCTNIDKKV+Q+DVKLFFES+CGEV RLRLLGDYHHSTRIAFVEF +
Sbjct: 170 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFAL 227
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
++ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 174 QMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMA 233
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG P+RV PSKT + P
Sbjct: 234 ALNCSGAILGSLPIRVSPSKTPVRP 258
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 191/238 (80%), Gaps = 6/238 (2%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
MREL++L KLNP+A+EFVPPS T + V FF + F + R +
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPS--PTTQGDLEVLLETKAFFVLATFSFFAGSDRKLGL-- 56
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
+ ++ + GK+R N+R S AQREE IRRTVYVSDIDQQVTEEQLAALF+ CGQV+D
Sbjct: 57 --FLVQQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 114
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
CR+CGDPNSVLRFAF+EFTDEEGAR ALNLAGTMLGFYPVRVLPSKTAI PVNPTFLPR+
Sbjct: 115 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 174
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
EDER+MCARTIYCTNIDKKV+Q+DVKLFFES+CGEV RLRLLGDYHHSTRIAFVEF +
Sbjct: 175 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFAL 232
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
++ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 179 QMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMA 238
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 239 ALNCSGAILGSLPIRVSPSKTPVRPRSP 266
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/249 (67%), Positives = 193/249 (77%), Gaps = 23/249 (9%)
Query: 155 RSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFN 214
R+ G F DMREL +L SKLNP+AEEF+P + + +NG G FANNS
Sbjct: 24 RAENKGGFNGDMRELVDLLSKLNPLAEEFIP---QPHRSPSFIING--NGSFANNSR--- 75
Query: 215 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
R+K +F QGKRR+N R AQ+E+ +RRTVYV DID QVTEEQLA
Sbjct: 76 ---------------RKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLA 120
Query: 275 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
ALF+ CGQV+DCRICGDPNSVLRFAFIEF DE+GARAAL+LAGTMLG+YPVRVLPSKTAI
Sbjct: 121 ALFINCGQVIDCRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAI 180
Query: 335 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 394
PVNPTFLPR+EDEREMCARTIYCTNIDKKV+Q +V++FFES+CGEV RLRLLGD+ HST
Sbjct: 181 LPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHST 240
Query: 395 RIAFVEFVM 403
RIAFVEFVM
Sbjct: 241 RIAFVEFVM 249
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 196 EMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIL 255
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G ++G P+RV PSKT + P P
Sbjct: 256 ALNCSGAIVGSLPIRVSPSKTPVRPRIP 283
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 150/165 (90%), Positives = 162/165 (98%)
Query: 239 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 298
KRRMNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 80 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 139
Query: 299 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 358
AFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYC
Sbjct: 140 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 199
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
TNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAFVEFVM
Sbjct: 200 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVM 244
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 191 EMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATA 250
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 251 ALNCSGVILGSLPIRVSPSKTPVRPRAP 278
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/174 (87%), Positives = 164/174 (94%), Gaps = 1/174 (0%)
Query: 231 RKKSFGQGK-RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 289
+K + QG RR+NSRTS AQRE+ IRRTVYVSDIDQQVTEEQLAALF+ CGQVVDCR+C
Sbjct: 1 KKNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVC 60
Query: 290 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 349
GDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVLPSKTAI PVNPTFLPR+EDER
Sbjct: 61 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDER 120
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
EMCARTIYCTNIDKKV+QADVKLFFES+CGEV RLRLLGDYHHSTRIAFVEFVM
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVM 174
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 180
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 181 ALNCSGAILGSLPIRVSPSKTPVRPRSP 208
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/162 (90%), Positives = 159/162 (98%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 301
MNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+ CGQVVDCR+CGDPNSVLRFAFI
Sbjct: 1 MNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFI 60
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
EFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNI
Sbjct: 61 EFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNI 120
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
DKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAFVEFVM
Sbjct: 121 DKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVM 162
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 109 EMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATA 168
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 169 ALNCSGVILGSLPIRVSPSKTPVRPRAP 196
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/254 (62%), Positives = 194/254 (76%), Gaps = 6/254 (2%)
Query: 150 NQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANN 209
+ N S + + +++L ++F+KLNP+A+EF P S + N++HG GFN
Sbjct: 10 DANKMDSKPKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP--NHDHGFQGFNQ-LSPTQ 66
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 269
L+ +A +N+ RR+ SF QG+RR++ R+ AQRE+ IRRTVYVS+IDQ VT
Sbjct: 67 FLVSTKPSANENFLNSR---RRRNSFNQGRRRVSGRSLKAQREDSIRRTVYVSEIDQHVT 123
Query: 270 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 329
EE+LAALF CGQV+DCRICGDP+SVLRFAF+EF DE GAR ALNL GT+LG+YPVRVLP
Sbjct: 124 EERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLP 183
Query: 330 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
SKTAI PVNPTFLPR++DEREMCARTIYCTNIDKKV+QA+VK FFES CGEV RLRLLGD
Sbjct: 184 SKTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGD 243
Query: 390 YHHSTRIAFVEFVM 403
HSTRIAFVEF M
Sbjct: 244 QVHSTRIAFVEFAM 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ ++ F CG+V+ R+ GD R AF+EF E A
Sbjct: 204 EMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESAII 263
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 264 ALNCSGMLLGTQPIRVSPSKTPVRPRVP 291
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 183/238 (76%), Gaps = 14/238 (5%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
+++L ++F+KLNP+A+EF P S K N +N F + N +A N
Sbjct: 46 VQKLVDMFTKLNPLAKEFFPSSYNKNNPKQFHINNFP---------VPNKQSA-----ND 91
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
N RR+ F QG+RR+N R AQRE+ IRRTVYVSDIDQ VTEEQLA LF GCGQVVD
Sbjct: 92 NFPKRRRNDFNQGRRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVD 151
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
CRICGDP SVLRFAF+EF E+GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLP++
Sbjct: 152 CRICGDPRSVLRFAFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQS 211
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
EDEREMC RT+YCTNI+KKV+QA+VK FFES+CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 212 EDEREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAM 269
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 246 TSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFI 301
T L Q E E+ RTVY ++I+++V++ ++ F CG+V R+ GD R AF+
Sbjct: 206 TFLPQSEDEREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFV 265
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAP 336
EF E A ALN +G +LG PVRV PSKT + P
Sbjct: 266 EFAMAESAIVALNCSGMVLGSQPVRVSPSKTPVRP 300
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/239 (64%), Positives = 184/239 (76%), Gaps = 16/239 (6%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR-NGNVN 224
+++L ++F+KLNP+A+EF P S +K N N L FNN + N
Sbjct: 45 VQKLVDMFTKLNPLAKEFFPSSYSKNNPN---------------ELHFNNFAVPVKQSAN 89
Query: 225 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
N R++ +F QG+R++N R AQ+E+ IRRTVYVSDIDQ VTEE+LA LF GCGQVV
Sbjct: 90 DNFPKRKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVV 149
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCR+CGDP+SVLRFAF+EF DE+GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 150 DCRVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPR 209
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
+EDEREMC RT+YCTNIDKKV+Q +VK FFES+CGEV RLRLLGD HSTRIAFVEF M
Sbjct: 210 SEDEREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAM 268
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++V++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 215 EMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIV 274
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G LG PVRV PSKT + P
Sbjct: 275 ALNCSGMALGSQPVRVSPSKTPVRP 299
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/238 (64%), Positives = 187/238 (78%), Gaps = 9/238 (3%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
+++L ++F+KLNP+A+EF P S NNNN N N NN + + + N ++
Sbjct: 31 VQKLVDMFTKLNPLAKEFFPSSY---NNNNITHNFLN----LNNFAVVVDKQSPIDNFSS 83
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
N R++ ++ QGKRR+N R AQR++ IRRTVYVSDIDQ VTEE+LA LF CGQVVD
Sbjct: 84 NR--RKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEERLAGLFSSCGQVVD 141
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
CR+CGDP+SVLRFAF+EF DE GARAALNL GT+LG+YP RVLPSKTAI PVNPTFLPR+
Sbjct: 142 CRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRVLPSKTAILPVNPTFLPRS 201
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
EDEREMC+RT+YCTNIDKK++QA+VK FFES CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 202 EDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVHSTRIAFVEFAM 259
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID+++++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 206 EMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVHSTRIAFVEFAMAESAII 265
Query: 312 ALNLAGTMLGFYPVR 326
ALN +G ++G P+R
Sbjct: 266 ALNCSGMVVGTQPIR 280
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 145/162 (89%), Positives = 154/162 (95%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 301
MN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVVDCRICGDPNSVLRFAFI
Sbjct: 1 MNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFI 60
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
EFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPRTEDE EMCARTIYCTNI
Sbjct: 61 EFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDESEMCARTIYCTNI 120
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
DKKVTQ+DVK+FFE CGEVYRLRLLGDY HSTRIAFVEFVM
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVM 162
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 109 EMCARTIYCTNIDKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 168
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 169 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 196
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 189/263 (71%), Gaps = 4/263 (1%)
Query: 144 LDQGLYNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNG 203
+D+G+ + S + + DM +L +F KLNP+A+EF P NN V N
Sbjct: 28 IDEGIEKSSITDSKTETESRLDMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQ--VAKANQ 85
Query: 204 GFFANNSLIFNNHNARNGNVNA--NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYV 261
A++ + +++A + R+++++ QG+RR+ R S AQRE+ IRRTVYV
Sbjct: 86 FLPADDFETTKKQSGEEFDLDAKKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYV 145
Query: 262 SDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLG 321
SDIDQ VTEE LA LF CGQVVDCRICGDP+SVLRFAF+EF D++GA AL+L GTMLG
Sbjct: 146 SDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLG 205
Query: 322 FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 381
FYPVRVLPSKTAI PVNPTFLPR+EDEREMC RTIYCTNIDKKV+QADV+ FFES CGEV
Sbjct: 206 FYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEV 265
Query: 382 YRLRLLGDYHHSTRIAFVEFVMV 404
RLRLLGD HSTRIAFVEF +
Sbjct: 266 TRLRLLGDQLHSTRIAFVEFALA 288
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ + F CG+V R+ GD R AF+EF + A +
Sbjct: 234 EMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALS 293
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G ++G P+RV PSKT + P
Sbjct: 294 ALNCSGMVVGSQPIRVSPSKTPVRP 318
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 143/156 (91%), Positives = 154/156 (98%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
+AQREE+I+RTVYVSDIDQQVTEE LAALF+ CGQVVDCRICGDPNSVLRFAF+EFTDEE
Sbjct: 1 MAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEE 60
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
GARAAL+LAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQ
Sbjct: 61 GARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQ 120
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
A+VKLFFES+CGEV+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 121 AEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVM 156
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ ++ F CG+V R+ GD + R AF+EF E A A
Sbjct: 103 EMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIA 162
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 163 ALNCSGAILGSLPIRVSPSKTPVRPRAP 190
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/255 (60%), Positives = 193/255 (75%), Gaps = 8/255 (3%)
Query: 150 NQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN-HGVNGFNGGFFAN 208
+ N S + + +++L ++F+KLNP+A+EF P S + ++N G N + F
Sbjct: 10 DANKMDSKPKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSPNHDNRFQGFNQLSPTHF-- 67
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 268
L+ +A + N RR+ SF QG+R+++ R+ AQRE+ IRRTVYVS+IDQ V
Sbjct: 68 --LVSTKPSA---DENFPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHV 122
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 328
TEE+LAALF CGQV+DCRICGDP+SVLRFAF+EF DE GAR ALNL GT+LG+YPVRVL
Sbjct: 123 TEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVL 182
Query: 329 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 388
PSKTAI PVNPTFLPR++DEREMCART+YCTNIDKKV+QA+VK FFES CGEV RLRLLG
Sbjct: 183 PSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLG 242
Query: 389 DYHHSTRIAFVEFVM 403
D+ HSTRIAFVEF M
Sbjct: 243 DHVHSTRIAFVEFAM 257
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++V++ ++ F CG+V+ R+ GD R AF+EF E A
Sbjct: 204 EMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESAII 263
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG P+RV PSKT + P
Sbjct: 264 ALNCSGMLLGTQPIRVSPSKTPVRP 288
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/246 (62%), Positives = 191/246 (77%), Gaps = 5/246 (2%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR- 219
D + +M++L ++F+KLNP+AEEF+P S A + +H GFN ++ N + NN+N +
Sbjct: 30 DSEFNMQKLVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGFNQ--WSPNPFLVNNNNNKP 87
Query: 220 --NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALF 277
+ RR+ +F QG RR R AQRE+ +RRTVYVSDIDQ VTEE+LAALF
Sbjct: 88 LADDQYPNANNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALF 147
Query: 278 VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 337
CG V+DCRICGDP+SVLRFAF+EF DE GARAALNL+GT+LG+YPVRVLPSKTAI PV
Sbjct: 148 TTCGSVIDCRICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPV 207
Query: 338 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIA 397
NPTFLPR++DEREMC+RT+YCTNIDKKV+QA+VK FFE CGEV R+RLLGD+ HSTRIA
Sbjct: 208 NPTFLPRSDDEREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIA 267
Query: 398 FVEFVM 403
FVEF +
Sbjct: 268 FVEFAI 273
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++V++ ++ F + CG+V R+ GD R AF+EF E A
Sbjct: 220 EMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAESAII 279
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
AL+ +G +LG PVRV PSKT + P P
Sbjct: 280 ALSCSGMLLGTQPVRVSPSKTPVRPRVP 307
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 138/162 (85%), Positives = 154/162 (95%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 301
++SRTS+AQRE+ +RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDPNSVL FAFI
Sbjct: 1 ISSRTSMAQREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFI 60
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
EFTDEEGARAAL+L+GTMLG+YPV+VLPSKTAIAPVN TFLPR +DEREMCARTIYCTNI
Sbjct: 61 EFTDEEGARAALSLSGTMLGYYPVKVLPSKTAIAPVNHTFLPRNDDEREMCARTIYCTNI 120
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
D+ TQ+D+KLFFES+CGEVYRLRLLGD+HH TRIAFVEFVM
Sbjct: 121 DRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVM 162
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+ T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 109 EMCARTIYCTNIDRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMAESAIA 168
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G ++G P+RV PSKT + P P
Sbjct: 169 ALNCSGAVIGSLPIRVSPSKTPVRPRGP 196
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/253 (61%), Positives = 185/253 (73%), Gaps = 15/253 (5%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN------------NNHGVNGFNGGFFANN 209
+++ +++L +L SKLNP A+EFVP S A ++ + + + G+NGG +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYNSIGGWNGGGKESG 87
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 269
+ + + R + + +RR QG+RRMN R A RE+ IRRTVYVSDID VT
Sbjct: 88 A---DAYQQRRDLTDDDQLLRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVT 144
Query: 270 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 329
EE+LA +F CGQVVDCRICGDP+SVLRFAFIEF DEEGARAALNL GTMLGFYPVRVLP
Sbjct: 145 EERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARAALNLGGTMLGFYPVRVLP 204
Query: 330 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
SKTAI PVNP FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 205 SKTAILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGD 264
Query: 390 YHHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 265 NVHSTRIAFVEFV 277
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VT+ + F CG+V R+ GD R AF+EF E A
Sbjct: 224 KEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAI 283
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 284 MALNCSGMILGTLPVRVSPSKTPVKP 309
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 152/158 (96%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
+AQ+EEI+RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDP SVLRFAFIEFTDEE
Sbjct: 1 MAQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEE 60
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
GA+AAL+L+GTMLG+YPV+VLPSKTAIAPVNPTFLPR +DEREMCARTIYCTNID+ +TQ
Sbjct: 61 GAQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQ 120
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVI 405
A++KLFFES+CGEVY LRLLGD+HH TRIAFVEFVMVI
Sbjct: 121 ANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMVI 158
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/242 (64%), Positives = 182/242 (75%), Gaps = 2/242 (0%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 221
+++ +++L +L SKLNP A+EFVP S A ++ + ++ + F NS+ N +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSA-DAPVFDYNSIGGWNGGGKES 86
Query: 222 NVNANAAVRRKKSF-GQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGC 280
+A RR+ + QG+RRMN R A RE+ IRRTVYVSDID VTEE+LA +F C
Sbjct: 87 GADAYQQRRRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANC 146
Query: 281 GQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
GQVVDCRICGDP+SVLRFAFIEF DEEGAR ALNL GTMLGFYPVRVLPSKTAI PVNP
Sbjct: 147 GQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTAILPVNPK 206
Query: 341 FLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVE 400
FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD HSTRIAFVE
Sbjct: 207 FLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVE 266
Query: 401 FV 402
FV
Sbjct: 267 FV 268
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VT+ + F CG+V R+ GD R AF+EF E A
Sbjct: 215 KEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAI 274
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 275 MALNCSGMILGTLPVRVSPSKTPVKP 300
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 180/249 (72%), Gaps = 25/249 (10%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 206
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 207 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 257
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 378 CGEVYRLRL 386
CGEV R L
Sbjct: 277 CGEVGRSLL 285
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF
Sbjct: 156 RTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFT 203
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 184/253 (72%), Gaps = 15/253 (5%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN------------NNHGVNGFNGGFFANN 209
+++ +++L +L SKLNP A+EFVP S A ++ + + + G+NGG +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYNSIGGWNGGGKESG 87
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 269
+ + + R + + +RR QG+RRMN R A RE+ IRRTVYVSDID VT
Sbjct: 88 A---DAYQQRRDLTDDDQLLRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVT 144
Query: 270 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 329
EE+LA +F CGQVVDCRICGDP+SVLRFAFIEF DEEGAR ALNL GTMLGFYPVRVLP
Sbjct: 145 EERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLP 204
Query: 330 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
SKTAI PVNP FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 205 SKTAILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGD 264
Query: 390 YHHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 265 NVHSTRIAFVEFV 277
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VT+ + F CG+V R+ GD R AF+EF E A
Sbjct: 224 KEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAI 283
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 284 MALNCSGMILGTLPVRVSPSKTPVKP 309
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/156 (85%), Positives = 150/156 (96%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
+AQ+EEI+RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDP SVLRFAFIEFTDEE
Sbjct: 1 MAQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEE 60
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
GA+AAL+L+GTMLG+YPV+VLPSKTAIAPVNPTFLPR +DEREMCARTIYCTNID+ +TQ
Sbjct: 61 GAQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQ 120
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
A++KLFFES+CGEVY LRLLGD+HH TRIAFVEFVM
Sbjct: 121 ANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVM 156
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+ +T+ + F CG+V R+ GD + R AF+EF E A A
Sbjct: 103 EMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMAESAIA 162
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 163 ALNCSGVVLGSLPIRVSPSKTPVRPRGP 190
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 171/240 (71%), Gaps = 21/240 (8%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
M++L +F KLNP A+EF P TN ++ V N
Sbjct: 50 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKPSGEDNK---------------- 93
Query: 226 NAAVRRKKSFGQGKR-RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
+R+ ++ QG+R R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVV
Sbjct: 94 ----KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVV 149
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 150 DCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPR 209
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF M
Sbjct: 210 SEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 269
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+ TE+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 215 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 274
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
ALN +G +LG P+RV PSKT +
Sbjct: 275 ALNCSGIVLGSQPIRVSPSKTPV 297
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/173 (78%), Positives = 153/173 (88%)
Query: 231 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG 290
R+ ++ QG+RR++ R AQRE+ IRRTVYVSDIDQ VTEE+LAALF CGQVVDCR+CG
Sbjct: 324 RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 383
Query: 291 DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 350
DP+SVLRFAF+EF DE GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR+EDERE
Sbjct: 384 DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 443
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
MCART+YCTNIDKKV+QA+VK FFE CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 444 MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAM 496
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 171/240 (71%), Gaps = 21/240 (8%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
M++L +F KLNP A+EF P TN ++ V N
Sbjct: 37 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKPSGEDNK---------------- 80
Query: 226 NAAVRRKKSFGQGKR-RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
+R+ ++ QG+R R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVV
Sbjct: 81 ----KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVV 136
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
DCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 137 DCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPR 196
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF M
Sbjct: 197 SEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 256
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+ TE+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 202 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 261
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
ALN +G +LG P+RV PSKT +
Sbjct: 262 ALNCSGIVLGSQPIRVSPSKTPV 284
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 176/252 (69%), Gaps = 13/252 (5%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN----------HGVNGFNGGFFANNS 210
++ +D+++L +L SKLNP A+EFVP S A T + G NGG A+
Sbjct: 29 EYHKDVQKLVDLLSKLNPAAKEFVPSSAAATPRKGLSADAPVFYYGSIGGRNGGIGADAG 88
Query: 211 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 270
I R V+ RR G+RR N R A REE IRRTVYVS++D VTE
Sbjct: 89 YIGYQQRMRRNFVDNE---RRNGYINHGRRRTNERARRADREESIRRTVYVSELDHTVTE 145
Query: 271 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
E+LA +F CGQVVDCRICGDPNSV+RFAFIEF EEGARAALNL GTMLGFYPVRVLPS
Sbjct: 146 ERLAEIFANCGQVVDCRICGDPNSVMRFAFIEFAGEEGARAALNLGGTMLGFYPVRVLPS 205
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 390
KTAI PVNP FLP TEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 206 KTAILPVNPKFLPATEDEKEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLRLLGDN 265
Query: 391 HHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 266 VHSTRIAFVEFV 277
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VT+ + + F CG+V R+ GD R AF+EF + EGA
Sbjct: 224 KEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLRLLGDNVHSTRIAFVEFVNAEGAI 283
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 284 QALNCSGMILGTLPVRVSPSKTPVKP 309
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/265 (58%), Positives = 185/265 (69%), Gaps = 30/265 (11%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH---NA 218
+K DMR+L+EL SKLNP A+EFVP S + G GG A+ + + A
Sbjct: 50 YKSDMRKLEELMSKLNPCAQEFVPSSRRAASAPAPG-----GGLSADAPVFVSAAEFFGA 104
Query: 219 RNGNVNANAA----------------------VRRKKSFGQGKRRMNSRTSLAQREEIIR 256
G + A +RR SF QG+RRM RT + RE+ +R
Sbjct: 105 GAGQLQGTGAGGGRDSSSDGSSNGGGQPQNRRIRRNGSFNQGRRRMGGRTRRSDREDSVR 164
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RTVYVSD+DQQVTE++LA +F CGQVVDCRICGDP+SVLRFAFIEF D+ GARAALNLA
Sbjct: 165 RTVYVSDVDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALNLA 224
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDKKVT+ DVK+FF+
Sbjct: 225 GTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEDDVKIFFQR 284
Query: 377 VCGEVYRLRLLGDYHHSTRIAFVEF 401
+CG+V RLRLLGDY HST IAFVEF
Sbjct: 285 LCGKVSRLRLLGDYVHSTCIAFVEF 309
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTE+ + F CG+V R+ GD AF+EFT E A
Sbjct: 257 KEMVSRTVYCTNIDKKVTEDDVKIFFQRLCGKVSRLRLLGDYVHSTCIAFVEFTQAESAI 316
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 317 LALNYSGLVLGSLPIRVSPSKTPVRPRSPRVM 348
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 182/255 (71%), Gaps = 26/255 (10%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN----------NNHGVNGFNGGF---FAN 208
+++D+++L +L S LNP A EFVP S A + + + G NGG +
Sbjct: 28 YQKDVQKLVDLLSNLNPAAREFVPSSAAPPSKKALSADAPVFDYCSIGGANGGSRDSGVD 87
Query: 209 NSLIFNN-HNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
++ I N H R+G +N G+RRMN R A RE+ IRRTVYVS++D
Sbjct: 88 STYIGNQQHKMRSGYIN------------HGRRRMNERARRADREDSIRRTVYVSELDHT 135
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEE+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGARAALNL GTMLGFYPVRV
Sbjct: 136 VTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFSDEEGARAALNLGGTMLGFYPVRV 195
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
LPSKTAI PVNP FLPRTEDE+EM RTIYCTNIDKKVTQ DVK FF+ +CGEV RLRLL
Sbjct: 196 LPSKTAILPVNPKFLPRTEDEKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLL 255
Query: 388 GDYHHSTRIAFVEFV 402
GD HSTRIAFVEFV
Sbjct: 256 GDNVHSTRIAFVEFV 270
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RT+Y ++ID++VT+ + + F CG+V R+ GD R AF+EF + EGA
Sbjct: 217 KEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLLGDNVHSTRIAFVEFVNAEGAI 276
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 277 MALNCSGMILGTLPVRVSPSKTPVKP 302
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 175/229 (76%), Gaps = 18/229 (7%)
Query: 175 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 234
KLNP+A+EF P S ++++ LI + + + N RR+ +
Sbjct: 43 KLNPLAKEFFPSS------------------YSHDHLIPTDFSKDSPNDAYPNNRRRRNN 84
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 294
+ QG+RR++ R AQRE+ IRRTVYVSDIDQ VTEE+LAALF CGQVVDCR+CGDP+S
Sbjct: 85 YNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHS 144
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
VLRFAF+EF DE GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR+EDEREMCAR
Sbjct: 145 VLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCAR 204
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
T+YCTNIDKKV+QA+VK FFE CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 205 TVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAM 253
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++V++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 200 EMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIV 259
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 260 ALNCSGLVLGTQPIRVSPSKTPVRPRVP 287
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/241 (59%), Positives = 170/241 (70%), Gaps = 19/241 (7%)
Query: 166 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 225
M++L +F KLNP A+EF P TN ++ V +G N
Sbjct: 50 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKP----------------SGEDNK 93
Query: 226 NAAVRRKKSFGQGKR---RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ 282
A+ R++ + R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQ
Sbjct: 94 KVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQ 153
Query: 283 VVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
VVDCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFL
Sbjct: 154 VVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFL 213
Query: 343 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
PR+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF
Sbjct: 214 PRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFA 273
Query: 403 M 403
M
Sbjct: 274 M 274
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+ TE+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 221 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 280
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
ALN +G +LG P+RV PSKT +
Sbjct: 281 ALNCSGIVLGSQPIRVSPSKTPV 303
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 177/252 (70%), Gaps = 20/252 (7%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNN----------NNHGVNGFNGGFFANNS 210
+++ +++L +L SKLNP A+EFVP + A + + G NG A
Sbjct: 17 EYQAGVQKLVDLLSKLNPAAKEFVPSAAASPPKKALSADAPVFDYRSIGGGNGATDAAFY 76
Query: 211 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 270
+ F N + R GN N QG+RR N R A+RE+ IRRTVYVS++D VTE
Sbjct: 77 VGFGNQHRRRGNGYIN----------QGRRRTNDRVRRAEREDSIRRTVYVSELDHTVTE 126
Query: 271 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
E+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 127 ERLADIFATCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 186
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 390
KTAI PVNP FLPRTEDE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 187 KTAILPVNPKFLPRTEDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 246
Query: 391 HHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 247 VHSTRIAFVEFV 258
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AF+EF EGA
Sbjct: 205 KEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAI 264
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 265 MALNCSGMILGTLPVRVSPSKTPVKP 290
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 164/233 (70%), Gaps = 10/233 (4%)
Query: 172 LFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRR 231
+F KLNP A+EF P S K N + + F +I + + + RR
Sbjct: 1 MFKKLNPEAKEFFP-SYKKNTNQSLSSDDF---------VIAKKPSGEDNKKDGINRRRR 50
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 291
+ R+ R S AQRE IRRTVYVSDIDQ VTEE LA LF CGQVVDCRICGD
Sbjct: 51 NNYNQGRRVRLPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGD 110
Query: 292 PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
PNSVLRFAF+EF+D++GARAAL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR+EDEREM
Sbjct: 111 PNSVLRFAFVEFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREM 170
Query: 352 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
C RTIYCTN+DK T+ VK FF+S CGEV RLRLLGD HSTRIAFVEF M
Sbjct: 171 CTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 223
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+ TE+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 169 EMCTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 228
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIA 335
ALN +G +LG P+R+ ++A+
Sbjct: 229 ALNCSGIVLGSQPIRLSQMRSALG 252
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 180/267 (67%), Gaps = 25/267 (9%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH---- 216
++K D R+L+ELF KLNP AEEFVP + + + + F + ++ F +
Sbjct: 59 EYKSDARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQ 118
Query: 217 ---------------------NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII 255
++ +G+ N RR+ SF QG+RRM R RE+ +
Sbjct: 119 QPPPIQVLPVVVGGGGGAGLDSSSDGSTNGQPNRRRRSSFNQGRRRMGGRPRRTDREDSV 178
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D+ GARAAL L
Sbjct: 179 RRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTL 238
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 239 GGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFE 298
Query: 376 SVCGEVYRLRLLGDYHHSTRIAFVEFV 402
+CGEV RLRLLGDY HST IAFVEFV
Sbjct: 299 GMCGEVARLRLLGDYVHSTCIAFVEFV 325
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + + F G CG+V R+ GD AF+EF + A
Sbjct: 272 KEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAI 331
Query: 311 AALNLAGTMLGFYPVR-------VLPSKTAIAPVNP 339
AL+ +G +LG PVR V PSKT + P +P
Sbjct: 332 LALSCSGMVLGALPVRQANTPYAVSPSKTPVRPRSP 367
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/234 (59%), Positives = 179/234 (76%), Gaps = 17/234 (7%)
Query: 168 ELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANA 227
+L S+LNPMA+EFVP LA+T++ F + L F N N V A +
Sbjct: 58 DLMSEISRLNPMAKEFVPSFLAQTHSE-----------FLRSRLWFTN----NFPVQAIS 102
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
+RR SFGQG+R +N +T+L Q E++I+RTVYVSDIDQQVTEEQLA+LF+ CGQVVDCR
Sbjct: 103 TMRR--SFGQGRRWINKKTNLVQNEDVIKRTVYVSDIDQQVTEEQLASLFLSCGQVVDCR 160
Query: 288 ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTED 347
ICGD S+LRFAFIEFTD EGAR+AL +GT+ G +P+RV SKTAIAPVNP+FLPR+E+
Sbjct: 161 ICGDHKSILRFAFIEFTDAEGARSALRKSGTVFGSHPIRVHISKTAIAPVNPSFLPRSEE 220
Query: 348 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E E C +T+YCTNIDK+VT+ +++ FF++VCGEV+ LRLLGD++H TRIAFVEF
Sbjct: 221 ELEKCGKTVYCTNIDKQVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEF 274
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 14/126 (11%)
Query: 225 ANAAVRRKKS-FGQGKRRMN-SRTSLA---------QREEIIR--RTVYVSDIDQQVTEE 271
A +A+R+ + FG R++ S+T++A EE+ + +TVY ++ID+QVT+
Sbjct: 182 ARSALRKSGTVFGSHPIRVHISKTAIAPVNPSFLPRSEEELEKCGKTVYCTNIDKQVTKM 241
Query: 272 QLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
+L F CG+V R+ GD R AF+EF E A +ALN +G +LG P+R+ PS
Sbjct: 242 ELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNYSGVVLGELPIRISPS 301
Query: 331 KTAIAP 336
KT + P
Sbjct: 302 KTPVRP 307
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 183/266 (68%), Gaps = 26/266 (9%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIF------- 213
++K D+R+L+ELF KLNP AEEFVP L++ + + F + ++ +
Sbjct: 48 EYKSDVRKLEELFKKLNPSAEEFVP--LSRRQADGGRRLSADAPVFVSPAIDYYAPHHPF 105
Query: 214 -----------------NNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIR 256
++ +G+VN RR+ F QG+RRM R RE+ +R
Sbjct: 106 QQQQPQQMHVLQVVGGGGRDSSSDGSVNGQPNRRRRNGFNQGRRRMGPRPRRTDREDSVR 165
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL+LA
Sbjct: 166 RTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALSLA 225
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 226 GTILGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKKFFEG 285
Query: 377 VCGEVYRLRLLGDYHHSTRIAFVEFV 402
+CGEV RLRLLGDY HST IAFVEFV
Sbjct: 286 ICGEVARLRLLGDYVHSTCIAFVEFV 311
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + F G CG+V R+ GD AF+EF EGA
Sbjct: 258 KEMVSRTVYCTNIDKNVPEDVVKKFFEGICGEVARLRLLGDYVHSTCIAFVEFVQAEGAI 317
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG PVRV PSKT + P +P
Sbjct: 318 MALNCSGMLLGSLPVRVSPSKTPVRPRSP 346
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/267 (55%), Positives = 180/267 (67%), Gaps = 25/267 (9%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH---- 216
++K D R+L+ELF KLNP AEEFVP + + + + F + ++ F +
Sbjct: 56 EYKSDARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQ 115
Query: 217 ---------------------NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII 255
++ +G+ N RR+ SF QG+RRM R RE+ +
Sbjct: 116 QPPPIQVLPVVVGGGGGAGLDSSSDGSTNGQPNRRRRSSFNQGRRRMGGRPRRTDREDSV 175
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D+ GARAAL L
Sbjct: 176 RRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTL 235
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 236 GGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFE 295
Query: 376 SVCGEVYRLRLLGDYHHSTRIAFVEFV 402
+CGEV RLRLLGDY HST IAFVEFV
Sbjct: 296 GMCGEVARLRLLGDYVHSTCIAFVEFV 322
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + + F G CG+V R+ GD AF+EF + A
Sbjct: 269 KEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAI 328
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
AL+ +G +LG P + T AP P
Sbjct: 329 LALSCSGMVLGALPGEPV-KDTGPAPFAP 356
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 166/236 (70%), Gaps = 19/236 (8%)
Query: 172 LFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRR 231
+F KLNP A+EF P TN ++ V +G N A+ R
Sbjct: 1 MFKKLNPEAKEFFPSYKRNTNQSDDFVIAIK----------------PSGEDNKKVAINR 44
Query: 232 KKSFGQGKR---RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 288
++ + R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVVDCRI
Sbjct: 45 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 104
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
CGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR+EDE
Sbjct: 105 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 164
Query: 349 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
REMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF M
Sbjct: 165 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y +++D+ TE+ + F CG+V R+ GD R AF+EF E A A
Sbjct: 166 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 225
Query: 312 ALNLAGTMLGFYPVRV 327
ALN +G +LG P+ V
Sbjct: 226 ALNCSGIVLGSQPISV 241
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/150 (84%), Positives = 143/150 (95%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
+IRRTVYVSDIDQ VTEEQLA+LF+ CGQVVDCR+CGDPNS+LRFAFIEFTDEE ARAA+
Sbjct: 1 MIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAV 60
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
+L+GTMLG+YP+RVLPSKTAIAPVNPT LPR+EDEREMC+RTIYCTNIDKK+TQADVK F
Sbjct: 61 SLSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 120
Query: 374 FESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
FES+CGEV+RLRLLGDY HSTRIAFVEF +
Sbjct: 121 FESICGEVHRLRLLGDYQHSTRIAFVEFAV 150
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 246 TSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFI 301
TSL + E E+ RT+Y ++ID+++T+ + F CG+V R+ GD R AF+
Sbjct: 87 TSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFV 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF E A AAL+ +G +LG P+RV PSKT +
Sbjct: 147 EFAVAESAIAALSCSGVILGALPIRVSPSKTPV 179
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 180/266 (67%), Gaps = 26/266 (9%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIF------- 213
++K D+R+L+ELF KLNP AEEFVP L++ + + F + ++ +
Sbjct: 48 EYKSDVRKLEELFKKLNPSAEEFVP--LSRRQGDGARRLSADAPVFVSPAIDYYAPHHPF 105
Query: 214 -----------------NNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIR 256
++ +G+ N RR+ F QG+RRM R RE+ +R
Sbjct: 106 QHQQMHVLQVVGGGGGAGRDSSSDGSANGQPNRRRRNGFNQGRRRMGVRPRRTDREDSVR 165
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL L
Sbjct: 166 RTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALG 225
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
GT+LGFYPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 226 GTVLGFYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEG 285
Query: 377 VCGEVYRLRLLGDYHHSTRIAFVEFV 402
+CGEV RLRLLGDY H+T IAFVEFV
Sbjct: 286 ICGEVARLRLLGDYVHATCIAFVEFV 311
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + F G CG+V R+ GD AF+EF + EGA
Sbjct: 258 KEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGAI 317
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG PVRV PSKT + P +P
Sbjct: 318 LALNCSGMLLGSLPVRVSPSKTPVRPRSP 346
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/252 (57%), Positives = 175/252 (69%), Gaps = 20/252 (7%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 220
+++ +++L +L S LNP A+EFVP + A + ++ +F+ H+
Sbjct: 18 EYQAGVQKLVDLLSNLNPAAKEFVPSAAASPPKKA----------LSADAPVFDYHSIGG 67
Query: 221 GNVNANAA----------VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 270
GN +AA R QG+RR N R A RE+ IRRTVYVS++D VTE
Sbjct: 68 GNGATDAAFYVGFGHQPRTRGNGYINQGRRRTNGRVRRADREDSIRRTVYVSELDHTVTE 127
Query: 271 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
E+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 128 ERLADIFTTCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 187
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 390
KTAI PVNP FLPRT+DE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 188 KTAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 247
Query: 391 HHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 248 VHSTRIAFVEFV 259
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AF+EF EGA
Sbjct: 206 KEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAI 265
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 266 MALNCSGMILGTLPVRVSPSKTPVKP 291
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/220 (65%), Positives = 165/220 (75%), Gaps = 18/220 (8%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKTNN-NNHGVNGFNGGFFANNSLIFNNHNARNG 221
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 222 NVNANAAVRRKKSF-------------GQG---KRRMNSRTSLAQREEIIRRTVYVSDID 265
V AV + G G +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 266 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 326 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKV
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKV 251
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E+ RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF
Sbjct: 139 EIIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 189
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 179/243 (73%), Gaps = 8/243 (3%)
Query: 165 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 224
D +L E+FS LNP+A+EF P S + +H F+ + NN + N + ++
Sbjct: 28 DAHKLAEMFSNLNPLAKEFFPSSYS-----HHDRQDFHFYYQNNNRSLAKNFQVADQLLH 82
Query: 225 ANAAVRRKKSFG-QGKRRMNS-RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CG 281
++ RR+ F QG+RRMN+ R+ AQ+EE IRRTVYVSDID+ V+EE+LA +F CG
Sbjct: 83 SDNNRRRRPEFNNQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFREFCG 142
Query: 282 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF 341
V DCRICGDP+SVLRFAF+EF +E ARAA+ L+GT++G YPV+VLPSKTAI PVNPTF
Sbjct: 143 YVNDCRICGDPHSVLRFAFVEFANEHSARAAVGLSGTVVGSYPVKVLPSKTAILPVNPTF 202
Query: 342 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
LP++ DE +MC RTIYCTNIDKKV+QA+VK FFE+ CGEV RLRLLGD HSTRIAFVEF
Sbjct: 203 LPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEF 262
Query: 402 VMV 404
+
Sbjct: 263 ALA 265
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
++ RT+Y ++ID++V++ ++ + F CG+V R+ GD R AF+EF E A
Sbjct: 211 DMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEFALAETALQ 270
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG P+RV PSKT + P
Sbjct: 271 ALNCSGMILGAQPIRVSPSKTPVRP 295
>gi|413941689|gb|AFW74338.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 182
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 135/137 (98%)
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPVR
Sbjct: 7 RVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 66
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
VLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLRL
Sbjct: 67 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 126
Query: 387 LGDYHHSTRIAFVEFVM 403
LGDYHHSTRIAFVEFVM
Sbjct: 127 LGDYHHSTRIAFVEFVM 143
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 90 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 149
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P P
Sbjct: 150 ALNCSGVILGSLPIRVSPSKTPVRPRAP 177
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 172/233 (73%), Gaps = 10/233 (4%)
Query: 169 LQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAA 228
L+ S LNPMA+EFVP LA+T+++ F N F NH +
Sbjct: 59 LKSEISHLNPMAKEFVPSFLAQTHHSE----------FWGNRFWFTNHFPKQTIFLIGQF 108
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 288
+++FG+G+ + +T+L Q E++I+RTVYVSDID QVTEEQLA+LF+ CGQVVDCR+
Sbjct: 109 ATMRRNFGKGRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRM 168
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
CGD S+LRFAFIEFTD EGAR+AL +GTM G +P+RV SKTAIAPVNP+FLP+++DE
Sbjct: 169 CGDYKSILRFAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDE 228
Query: 349 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E C +T+YCTNIDK+VT+ +++ FF++VCGEV+ LRLLGD++H TRIAFVEF
Sbjct: 229 LEKCGKTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEF 281
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
+TVY ++ID++VT+ +L F CG+V R+ GD R AF+EF E A +ALN
Sbjct: 234 KTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNC 293
Query: 316 AGTMLGFYPVRVLPSKTAI 334
+G +LG P+RV PSKT +
Sbjct: 294 SGVVLGELPIRVSPSKTPV 312
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/277 (53%), Positives = 177/277 (63%), Gaps = 36/277 (12%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 221
+ D+R+L+ELFSKLNP AEEFVPPS + + ++ F + + H+
Sbjct: 48 YASDIRKLEELFSKLNPSAEEFVPPSRRRVDGGARRLSADAPVFVSPAIDYYARHHQLPP 107
Query: 222 N-----------------------------------VNANAAVRRKKSFGQGKRRMNSRT 246
VN RR+ F QG+RRM
Sbjct: 108 PPLQQQQPMHVLQFVGGVGGGGMGGGGGRDSSSDGSVNGQPNRRRRNGFIQGRRRMMGGR 167
Query: 247 SL-AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
+ RE+ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D
Sbjct: 168 PRRSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFAD 227
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
+ GA+AAL L GT+LGFYPV+VLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDKK+
Sbjct: 228 DVGAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKI 287
Query: 366 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
+ +VK FFE CGEV RLRLLGDY HST IAFVEFV
Sbjct: 288 GEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFV 324
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+++ E+++ F G CG+V R+ GD AF+EF + A
Sbjct: 271 KEMVSRTVYCTNIDKKIGEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAI 330
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG PVRV PSKT + P +P
Sbjct: 331 LALNCSGIVLGTLPVRVSPSKTPVRPRSP 359
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/246 (56%), Positives = 171/246 (69%), Gaps = 10/246 (4%)
Query: 165 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 224
DM++L +F KLNP+A+EF P NH V N A++ N + + +
Sbjct: 57 DMQKLVAMFKKLNPLAKEFFPSYYDP--KKNHHVGKANQFLSADDFATTNKQSGEEFDPD 114
Query: 225 A--NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ 282
A + R+++++ QG+RR+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQ
Sbjct: 115 AKKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQ 174
Query: 283 VVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL----PSKTAIAPVN 338
VVDCRICGDP+SVLRFAF+EF D++GAR AL+L GTMLGFYPVRV S++ I+
Sbjct: 175 VVDCRICGDPHSVLRFAFVEFADDQGAREALSLGGTMLGFYPVRVKNCHSTSESHISSKG 234
Query: 339 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 398
+EDEREMC RTIYCTNIDKKV+QADV+ FFES CGEV RLRLLGD HSTRIAF
Sbjct: 235 K--CSDSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAF 292
Query: 399 VEFVMV 404
VEF +
Sbjct: 293 VEFTLA 298
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVV 284
VR K + ++S+ + E E+ RT+Y ++ID++V++ + F CG+V
Sbjct: 217 VRVKNCHSTSESHISSKGKCSDSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVT 276
Query: 285 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAP 336
R+ GD R AF+EFT + A ALN +G ++G P+RV PSKT + P
Sbjct: 277 RLRLLGDQLHSTRIAFVEFTLADSALRALNCSGMVVGSQPIRVSPSKTPVRP 328
>gi|413916285|gb|AFW56217.1| hypothetical protein ZEAMMB73_723080 [Zea mays]
Length = 246
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/143 (88%), Positives = 135/143 (94%), Gaps = 4/143 (2%)
Query: 265 DQQ----VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTML 320
DQQ VTEE LAALF+ CGQVVDC +CGDPNSVLRF FIEFTDEEGARAALNL+GTML
Sbjct: 16 DQQIVFKVTEENLAALFINCGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTML 75
Query: 321 GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGE 380
G+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE
Sbjct: 76 GYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 135
Query: 381 VYRLRLLGDYHHSTRIAFVEFVM 403
V+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 136 VFRLRLLGDYHHSTRIAFVEFVM 158
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFT 304
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF
Sbjct: 105 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFV 157
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 142/162 (87%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 301
MN+R AQRE+ IRRTVYV++ID VTEEQLAALF GQVVDCRICGDP+S LRFAF+
Sbjct: 1 MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
EF DE ARAAL+L GT+LGF P++VLPSKTAI PVNPTFLPR+EDEREMCART+YCTNI
Sbjct: 61 EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
DKKVTQADVK FFE+ CGEV RLRLLGD+ HSTRIAFVEFVM
Sbjct: 121 DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVM 162
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RTVY ++ID++VT+ + F CG+V R+ GD R AF+EF E A
Sbjct: 109 EMCARTVYCTNIDKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIL 168
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
AL+ G +LG +RV PSKT + P P
Sbjct: 169 ALDCCGEILGSQRIRVSPSKTPVRPRLP 196
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/247 (59%), Positives = 172/247 (69%), Gaps = 19/247 (7%)
Query: 173 FSKLNPMAEEFVPPS----LAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAA 228
SKLNP A+EFVP S + G++ + F + + F A G V +
Sbjct: 1 MSKLNPRAQEFVPSSRRAPPSSAAQAAVGLSA-DAPVFVSAAEYFVGSGAGAGGVGGRDS 59
Query: 229 V--------------RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA
Sbjct: 60 SSDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLA 119
Query: 275 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+F CGQVVDCRICGDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI
Sbjct: 120 EVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAI 179
Query: 335 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 394
PVNP FLPRTEDE+EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST
Sbjct: 180 LPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHST 239
Query: 395 RIAFVEF 401
IAFVEF
Sbjct: 240 CIAFVEF 246
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTEE + F CG+V R+ GD AF+EF E A
Sbjct: 194 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAI 253
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 254 LALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 285
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 289
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 87 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 146
Query: 290 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 349
GDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+
Sbjct: 147 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 206
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST IAFVEF
Sbjct: 207 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEF 258
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTEE + F CG+V R+ GD AF+EF E A
Sbjct: 206 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAI 265
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 266 LALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 297
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 289
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 147 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 206
Query: 290 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 349
GDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+
Sbjct: 207 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 266
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST IAFVEF
Sbjct: 267 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEF 318
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTEE + F CG+V R+ GD AF+EF E A
Sbjct: 266 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAI 325
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 326 LALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 357
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 162 FKRDMRELQELFSKLNPMAEEFV 184
+K DMR+L+EL SKLNP A+EFV
Sbjct: 57 YKSDMRKLEELMSKLNPRAQEFV 79
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/252 (56%), Positives = 175/252 (69%), Gaps = 16/252 (6%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 220
+++ +++L +L S LNP A+EFVP S + + ++ +F+ +
Sbjct: 17 EYQAGVQKLVDLLSNLNPAAKEFVPSSAPAAAASPPKKA------LSADAPVFDYRSTAG 70
Query: 221 GNVNANAAV-------RRKKSFG---QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 270
GN + +RK+ G QG+RR N R A RE+ +RRTVYVS++D VTE
Sbjct: 71 GNGATDDPFYVGFGNQQRKRGNGYINQGRRRTNDRLRRADREDSVRRTVYVSELDHTVTE 130
Query: 271 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
E+LA +F CG VVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 131 ERLADIFATCGHVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 190
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 390
KTAI PVNP FLPRT+DE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 191 KTAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 250
Query: 391 HHSTRIAFVEFV 402
HSTRIAFVEFV
Sbjct: 251 VHSTRIAFVEFV 262
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AF+EF EGA
Sbjct: 209 KEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAI 268
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAP 336
ALN +G +LG PVRV PSKT + P
Sbjct: 269 MALNCSGMILGTLPVRVSPSKTPVKP 294
>gi|414868267|tpg|DAA46824.1| TPA: hypothetical protein ZEAMMB73_802900 [Zea mays]
Length = 328
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 119/137 (86%), Positives = 130/137 (94%)
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTD+EGARAALNL+G MLG+YPV
Sbjct: 152 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDDEGARAALNLSGNMLGYYPVN 211
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDK V QAD+KLFFES+CGEV+RLRL
Sbjct: 212 VLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRL 271
Query: 387 LGDYHHSTRIAFVEFVM 403
LGDYHHSTRIAFVEFVM
Sbjct: 272 LGDYHHSTRIAFVEFVM 288
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+ V + L F CG+V R+ GD + R AF+EF E A A
Sbjct: 235 EMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 294
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG P+RV PSKT + P +P
Sbjct: 295 ALNSSGVVLGSLPIRVNPSKTPVRPRDP 322
>gi|212274583|ref|NP_001130716.1| hypothetical protein [Zea mays]
gi|194689926|gb|ACF79047.1| unknown [Zea mays]
gi|413954111|gb|AFW86760.1| hypothetical protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 176/279 (63%), Gaps = 37/279 (13%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 220
+++ DMR+L+EL SKLNP AEEFVP S + + ++ F + + H+
Sbjct: 47 EYESDMRKLEELLSKLNPSAEEFVPQSRRRVDGGAPRLSADAPVFVSPAIDYYARHHQLP 106
Query: 221 GN------------------------------------VNANAAVRRKKSFGQGKRRM-N 243
N RR+ F QG+RRM
Sbjct: 107 PPPLLQQQQPMHVLQFVGGVGGVGMGGGGGMDSSSDGSANGQPNRRRRNGFIQGRRRMMG 166
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF 303
+R A RE+ +RRTVYVSD+DQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF
Sbjct: 167 ARPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEF 226
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
D+ A+AAL L GT+LGFYPV+VLPSKTAI PVNP FLP T+DE+EM +RT+YCTNIDK
Sbjct: 227 ADDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPHTDDEKEMVSRTVYCTNIDK 286
Query: 364 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
K+ + +VK FFE CGEV RLRLLGDY HST IAFVEFV
Sbjct: 287 KIAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFV 325
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+++ E+++ F G CG+V R+ GD AF+EF + A
Sbjct: 272 KEMVSRTVYCTNIDKKIAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAI 331
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG PVRV PSKT + +P
Sbjct: 332 LALNCSGIVLGTLPVRVSPSKTPVRSRSP 360
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/161 (74%), Positives = 133/161 (82%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 301
M R RE+ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFI
Sbjct: 1 MGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFI 60
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
EF D+ GARAAL L GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNI
Sbjct: 61 EFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNI 120
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
DK V + VK FFE +CGEV RLRLLGDY HST IAFVEFV
Sbjct: 121 DKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFV 161
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + + F G CG+V R+ GD AF+EF + A
Sbjct: 108 KEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAI 167
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
AL+ +G +LG P + T AP P
Sbjct: 168 LALSCSGMVLGALPGEPV-KDTGPAPFAP 195
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 170/276 (61%), Gaps = 36/276 (13%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 221
+K D+++L+ L SKLNP A+EFVP S G + ++ +F + G
Sbjct: 62 YKSDLKKLENLMSKLNPSAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYG 121
Query: 222 NVNANAAV-----------------------------------RRKKSFGQGKRRMNSRT 246
+ + RR+ SF G+RR
Sbjct: 122 AAGGHLEIGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGR 181
Query: 247 SLAQR-EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
E+ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAFIEF+D
Sbjct: 182 PRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSD 241
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
+ GARAAL LAGT+LG YPVRVLPSKTAI PVNP FLP+T+DE+EM +RT+YCTNIDKKV
Sbjct: 242 DAGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKV 301
Query: 366 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
T+ DVK FF+ CG+V RLRLL D HST IAFVEF
Sbjct: 302 TEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEF 337
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTEE + F CG+V R+ D AF+EF E A
Sbjct: 285 KEMVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAI 344
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 345 MALNFSGMVLGSLPIRVSPSKTPVRPRSPRVM 376
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/278 (49%), Positives = 170/278 (61%), Gaps = 38/278 (13%)
Query: 162 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 221
+K D+++L+ L SKLNP A+EFVP S G + ++ +F + G
Sbjct: 61 YKSDLKKLENLMSKLNPCAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYG 120
Query: 222 NVNANAAV-------------------------------------RRKKSFGQGKRRMNS 244
+ + RR+ SF G+RR
Sbjct: 121 AAGGHLEIGGGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAG 180
Query: 245 RTSLAQR-EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF 303
E+ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAFIEF
Sbjct: 181 GRPRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEF 240
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
+D+ GARAAL LAGT+LG YPVRVLPSKTAI PVNP FLP+T+DE+EM +RT+YCTNIDK
Sbjct: 241 SDDGGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDK 300
Query: 364 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
KVT+ DVK FF+ CG+V RLRLL D HST IAFVEF
Sbjct: 301 KVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEF 338
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID++VTEE + F CG+V R+ D AF+EF E A
Sbjct: 286 KEMVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAI 345
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
ALN +G +LG P+RV PSKT + P +P +
Sbjct: 346 MALNFSGMVLGSLPIRVSPSKTPVRPRSPRVM 377
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 149/219 (68%), Gaps = 38/219 (17%)
Query: 106 MAVVESASQDSAVSSAGSI-------------PASNGQDHPKQNGGTMVMPLDQGLYNQ- 151
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GGN-------GIHDEI 49
Query: 152 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 208
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 209 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 267
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE 306
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDE 199
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YP+
Sbjct: 39 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPIN 98
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
VL SKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 99 VLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGELKVCR 157
>gi|413952071|gb|AFW84720.1| hypothetical protein ZEAMMB73_482719 [Zea mays]
Length = 625
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 108/115 (93%)
Query: 266 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
QVTEE LAALF+ GQVVDC +CGDPNSVL+FAFIEFTDEEGAR ALNL+GT+L +YPV
Sbjct: 308 HQVTEENLAALFINYGQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 326 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGE 380
RVLPSKTAIAPVNPTF+PR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE
Sbjct: 368 RVLPSKTAIAPVNPTFVPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 422
>gi|413943210|gb|AFW75859.1| putative ubiquitin-conjugating enzyme family [Zea mays]
Length = 699
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 122/175 (69%), Gaps = 28/175 (16%)
Query: 263 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 322
D+ QVTEE LAALF+ CGQVVDCR+CGDPNSVLRF FIEFTDEEGARAALNL+GT+L +
Sbjct: 482 DLFCQVTEENLAALFINCGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRY 541
Query: 323 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 382
YPV VLPSKT IAPVNPTFLPR VTQAD+KLFFES+CGEV+
Sbjct: 542 YPVSVLPSKTVIAPVNPTFLPR--------------------VTQADLKLFFESICGEVF 581
Query: 383 RLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEF--YILHNPSIAWLEEFSGEYL 435
RLRLLGDYHHSTRIAFVEFVM L IH H P AW S L
Sbjct: 582 RLRLLGDYHHSTRIAFVEFVM------LKIHRCHGPGARHGPGGAWSTYLSAGTL 630
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 122/166 (73%)
Query: 236 GQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV 295
G G++ + EE IRRTVY+S +D +TEE LAA F CG+++DCRICGDPNS
Sbjct: 174 GPGQQAQKKKRPQKGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRICGDPNSA 233
Query: 296 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART 355
+RFAFIEF D E A AL G++LG P+RVLPSKTAI PVN +PR+ DE E C+RT
Sbjct: 234 MRFAFIEFMDVECAAKALEKTGSVLGNSPLRVLPSKTAIMPVNQELMPRSADEVERCSRT 293
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y NIDKKV + DVK FFES+CG+V R+RLLGDY HSTRIAFVEF
Sbjct: 294 VYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEF 339
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEE 307
A E RTVY ++ID++V + + A F CG+V R+ GD R AF+EF E
Sbjct: 284 ADEVERCSRTVYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEFHHAE 343
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAI 334
GA AALN +G +LG P+RV PSKT +
Sbjct: 344 GALAALNCSGALLGSLPIRVSPSKTPV 370
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIH 413
RT+Y + +D +T+ ++ FF S CG + R+ GD + + R AF+EF+ V ++
Sbjct: 195 RTVYISYVDCSLTEENLAAFF-SDCGRILDCRICGDPNSAMRFAFIEFMDVECAAKALEK 253
Query: 414 TEFYILHNP 422
T + ++P
Sbjct: 254 TGSVLGNSP 262
>gi|326508995|dbj|BAJ86890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/129 (77%), Positives = 110/129 (85%)
Query: 274 AALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTA 333
A +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL L GT+LGFYPVRVLPSKTA
Sbjct: 1 AEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTA 60
Query: 334 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
I PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE +CGEV RLRLLGDY H+
Sbjct: 61 ILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHA 120
Query: 394 TRIAFVEFV 402
T IAFVEFV
Sbjct: 121 TCIAFVEFV 129
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E++ RTVY ++ID+ V E+ + F G CG+V R+ GD AF+EF + EGA
Sbjct: 76 KEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGAI 135
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G +LG PVRV PSKT + P +P
Sbjct: 136 LALNCSGMLLGSLPVRVSPSKTPVRPRSP 164
>gi|222641306|gb|EEE69438.1| hypothetical protein OsJ_28831 [Oryza sativa Japonica Group]
Length = 353
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/231 (50%), Positives = 144/231 (62%), Gaps = 19/231 (8%)
Query: 175 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 234
+LNP A EF + + + NG + H +R G+ N + R
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSRQGRSAP- 144
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPN 293
+SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD +
Sbjct: 145 -------FSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHS 197
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 353
S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP++E EREMC+
Sbjct: 198 SGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAEREMCS 257
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
RTIYCTNIDK V D+K F E G+V+RL+LLGD H TRIAF+EF V
Sbjct: 258 RTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGC----GQVVDCRICGDPNSVLRFAFIE 302
S A+RE + RT+Y ++ID+ V L C GQV ++ GD R AFIE
Sbjct: 249 SEAERE-MCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIE 304
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 337
F + +GA ALN +G P+RV PSKT I V
Sbjct: 305 FAEVDGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|218201903|gb|EEC84330.1| hypothetical protein OsI_30837 [Oryza sativa Indica Group]
Length = 353
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/231 (50%), Positives = 144/231 (62%), Gaps = 19/231 (8%)
Query: 175 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 234
+LNP A EF + + + NG + H +R G+ N + R
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSRQGRSAP- 144
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPN 293
+SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD +
Sbjct: 145 -------FSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHS 197
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 353
S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP++E EREMC+
Sbjct: 198 SGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAEREMCS 257
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
RTIYCTNIDK V D+K F E G+V+RL+LLGD H TRIAF+EF V
Sbjct: 258 RTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGC----GQVVDCRICGDPNSVLRFAFIE 302
S A+RE + RT+Y ++ID+ V L C GQV ++ GD R AFIE
Sbjct: 249 SEAERE-MCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIE 304
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 337
F + +GA ALN +G P+RV PSKT I V
Sbjct: 305 FAEVDGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 117/150 (78%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE I+RTVY+S +D +TEE LAA F CG++VDCRICGDPNS +RFAFIEF D E A
Sbjct: 12 EENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATK 71
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL G++LG P+RVLPSKTAI PVN +PR+ DE E C+RT+Y NIDKKV + DV+
Sbjct: 72 ALEKTGSVLGKSPLRVLPSKTAIMPVNQELMPRSPDEVERCSRTVYAANIDKKVDKNDVR 131
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
FFES+CG+V R+RLLGDY HSTRIAFVEF
Sbjct: 132 AFFESLCGKVSRIRLLGDYAHSTRIAFVEF 161
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
RTVY ++ID++V + + A F CG+V R+ GD R AF+EF EGA AALN
Sbjct: 114 RTVYAANIDKKVDKNDVRAFFESLCGKVSRIRLLGDYAHSTRIAFVEFQHAEGALAALNC 173
Query: 316 AGTMLGFYPVRVLPSKTAI 334
+G +LG P+RV PSKT +
Sbjct: 174 SGALLGSLPIRVSPSKTPV 192
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
RT+Y + +D +T+ ++ FF S CG + R+ GD + + R AF+EF V
Sbjct: 17 RTVYISYVDCTLTEENLAAFF-SDCGRIVDCRICGDPNSAMRFAFIEFADV 66
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 115/151 (76%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE +R TVY+SDI VTE QLAA F CGQ+VDCR+CGDPNS +RFAFIEF E+ A+
Sbjct: 6 EEKVRCTVYISDISDTVTEAQLAAFFQDCGQLVDCRVCGDPNSSMRFAFIEFMQEDSAQQ 65
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL +G MLG +P+RV PSKTAI PVN T+LPR+ +ERE+ ART++ NID+ V + +
Sbjct: 66 ALGKSGAMLGDFPIRVSPSKTAIVPVNNTYLPRSTEERELVARTVFVGNIDRVVEREQLS 125
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
FF+++CG V ++RLLGD HS +IAF+EFV
Sbjct: 126 EFFQNLCGPVSKIRLLGDSQHSAKIAFIEFV 156
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
+ E++ RTV+V +ID+ V EQL+ F CG V R+ GD + AFIEF E
Sbjct: 101 EERELVARTVFVGNIDRVVEREQLSEFFQNLCGPVSKIRLLGDSQHSAKIAFIEFVTAES 160
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAI 334
ARAAL L+G +LG P+RV PSKT +
Sbjct: 161 ARAALKLSGALLGTLPLRVSPSKTPV 186
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 140/227 (61%), Gaps = 35/227 (15%)
Query: 175 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 234
+LNP A+EFVPP NGF + + +++ + +V+A
Sbjct: 5 RLNPGAKEFVPPG-----------NGFQ--------VSWQSYSFQKQDVSA--------- 36
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 294
G R S +R+ +++ VTE LA +F G++VDCR+CGDPNS
Sbjct: 37 --PGSLHTFQRQSRPRRKAALQK-----QFGGNVTEAALADVFKHSGKIVDCRVCGDPNS 89
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
+RFAFIEF DEE + A+ L GTMLG +P+RV+PSKTAI PVN +FLPRT++E E CAR
Sbjct: 90 AMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVPVNNSFLPRTQEELERCAR 149
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
T+Y NIDKKV + +V++FF+++CG V ++RLL DY+H + IAFVEF
Sbjct: 150 TVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEF 196
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
Query: 240 RRMNSRTSLAQ---------REEIIR--RTVYVSDIDQQVTEEQLAALF-VGCGQVVDCR 287
R M S+T++ +EE+ R RTVY+++ID++V E++ F CG V R
Sbjct: 121 RVMPSKTAIVPVNNSFLPRTQEELERCARTVYIANIDKKVDREEVRVFFQTLCGPVTKIR 180
Query: 288 ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+ D N V AF+EF D + AR AL+ +G +LG P+RV PSK +
Sbjct: 181 LLSDYNHVSSIAFVEFADFKSARKALDCSGALLGSLPIRVTPSKAPV 227
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 93/104 (89%)
Query: 282 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF 341
VVDCR+CGDPNSVLRFAFIEF DEEGARAA NL+ T+LG+YPV VLPSKTAIAPVN TF
Sbjct: 131 HVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTAIAPVNETF 190
Query: 342 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
LPR++DEREMCA TIYCTNIDKKVTQAD+ LFFES+CGE+ R
Sbjct: 191 LPRSDDEREMCASTIYCTNIDKKVTQADLNLFFESICGELKVCR 234
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 107/155 (69%), Gaps = 19/155 (12%)
Query: 241 RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--- 297
RM+SR + R +YV VTEE L ALF+ CGQVVDC +CGDPN VL
Sbjct: 72 RMSSRCVITCR-------LYVQG--WMVTEENLVALFINCGQVVDCHMCGDPNLVLSLLT 122
Query: 298 -------FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 350
+ EGARAALNL+GT+LG+YPV VLPSKTAIAPVN TFLPR+ DE E
Sbjct: 123 LCNGSTIYGVKNIDVPEGARAALNLSGTVLGYYPVNVLPSKTAIAPVNETFLPRSNDEHE 182
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
MCARTIYCTNIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 183 MCARTIYCTNIDKKVTQADLKLFFESICGELKVCR 217
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 105/142 (73%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
+ S Q+VTE LA +F G++VDCR+CGDPNS +RFAFIEF DE + A+ L G
Sbjct: 24 WQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAK 83
Query: 320 LGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCG 379
LG YP+RV+PSKTAI PVN +FLPRT+ E E CART+Y NIDK+V + DV+ FFE++CG
Sbjct: 84 LGKYPIRVMPSKTAIVPVNTSFLPRTQKELECCARTVYVANIDKRVDREDVRQFFETLCG 143
Query: 380 EVYRLRLLGDYHHSTRIAFVEF 401
V ++RLL DY+ + IAFVEF
Sbjct: 144 PVKKIRLLSDYNKVSSIAFVEF 165
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 40/195 (20%)
Query: 176 LNPMAEEFVPP-------------------SLAKTNNNNHGVNGFNGGFFANNSLIFN-- 214
LNP A+EFVPP SLA ++ + N+++ F
Sbjct: 6 LNPSAKEFVPPGKGFQESWQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFI 65
Query: 215 ---NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLA----------QRE-EIIRRTVY 260
+ A + N A K R M S+T++ Q+E E RTVY
Sbjct: 66 EFADERAVQQAIKLNGAKLGKYPI----RVMPSKTAIVPVNTSFLPRTQKELECCARTVY 121
Query: 261 VSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
V++ID++V E + F CG V R+ D N V AF+EF + AR AL+ +G +
Sbjct: 122 VANIDKRVDREDVRQFFETLCGPVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDCSGAL 181
Query: 320 LGFYPVRVLPSKTAI 334
LG P+RV PSK +
Sbjct: 182 LGMLPIRVTPSKAPV 196
>gi|116789825|gb|ABK25401.1| unknown [Picea sitchensis]
Length = 124
Score = 166 bits (419), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/85 (85%), Positives = 81/85 (95%)
Query: 319 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 378
MLG+YPVRVLPSKTAI PVNPTFLPR+EDEREMCARTIYCTNIDKKV+Q +V++FFES+C
Sbjct: 1 MLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLC 60
Query: 379 GEVYRLRLLGDYHHSTRIAFVEFVM 403
GEV RLRLLGD+ HSTRIAFVEFVM
Sbjct: 61 GEVSRLRLLGDHVHSTRIAFVEFVM 85
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID++V++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 32 EMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIL 91
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
ALN +G ++G P+RV PSKT + P P
Sbjct: 92 ALNCSGAIVGSLPIRVSPSKTPVRPRIP 119
>gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sativa Japonica Group]
Length = 316
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 135/255 (52%), Gaps = 45/255 (17%)
Query: 175 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 234
+LNP A EF + + + NG + H +R G+ N + R
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSRQGRSAP- 144
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPN 293
+SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD +
Sbjct: 145 -------FSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHS 197
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 353
S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP
Sbjct: 198 SGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLP---------- 247
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV------IAS 407
+V D+K F E G+V+RL+LLGD H TRIAF+EF V + S
Sbjct: 248 ----------QVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAINALNS 297
Query: 408 STLFIHTEFYILHNP 422
S +F + +NP
Sbjct: 298 SGIFASGQPIRFNNP 312
>gi|388517685|gb|AFK46904.1| unknown [Lotus japonicus]
Length = 124
Score = 162 bits (410), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/83 (86%), Positives = 81/83 (97%)
Query: 319 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 378
MLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ+DVK FFES+C
Sbjct: 1 MLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQSDVKNFFESIC 60
Query: 379 GEVYRLRLLGDYHHSTRIAFVEF 401
GEV RLRLLGD++HSTRIAFVEF
Sbjct: 61 GEVQRLRLLGDHNHSTRIAFVEF 83
Score = 71.6 bits (174), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E+ RT+Y ++ID+++T+ + F CG+V R+ GD N R AF+EF E A A
Sbjct: 32 EMCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIA 91
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
AL+ +G +LG P+RV PSKT + +P
Sbjct: 92 ALSCSGVILGSLPIRVSPSKTPVRSRSP 119
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 100/157 (63%), Gaps = 38/157 (24%)
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
VTEE LAALF+ C QVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+ T+LG+YPV
Sbjct: 31 MVTEENLAALFINCRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 327 VLPSKTAIAPVNPTFLPR-----------------TEDEREMCARTI------------- 356
VLPSKTAIAPVN TFLPR +M ++ +
Sbjct: 91 VLPSKTAIAPVNKTFLPRVCKPFGTNMLVLSSWLNVHALYDMVSKKVGRFSVLYSLTMNM 150
Query: 357 YCT--------NIDKKVTQADVKLFFESVCGEVYRLR 385
C NIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 151 KCVQGLSTAQINIDKKVTQADLKLFFESICGELKVCR 187
>gi|414884994|tpg|DAA61008.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 295
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 108/158 (68%), Gaps = 2/158 (1%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 306
+Q +E ++RT++V ID VTE+ LA LF G VVDCRICGDP S LRF F+E E
Sbjct: 100 SQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTVVDCRICGDPTSDDGLRFGFVELQHE 159
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 366
+ A A+L+L G ++ P+ V S+TAI P+NP FLP++E E E C RTIYCTNI K VT
Sbjct: 160 DEAIASLDLDGYIISVSPLSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTNISKNVT 219
Query: 367 QADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
++++ F E+ G+V R+RLL + ST IAF+EFV V
Sbjct: 220 SSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEV 257
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGC-GQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E RT+Y ++I + VT L + G+V R+ + AFIEF + GA A
Sbjct: 203 ETCLRTIYCTNISKNVTSSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEVYGAIA 262
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL G + P+R+ PSK+ I
Sbjct: 263 ALGSGGIYVDGVPIRMCPSKSPI 285
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 87/115 (75%), Gaps = 20/115 (17%)
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
VTEE LA LF+ CGQVVDCR+ GDPNSVLRFAF+EFTDEEGARAALNL+GT LG+YPV
Sbjct: 87 MVTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAALNLSGTELGYYPVN 146
Query: 327 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 381
VLPSKTAIAPVN TFLPR VTQAD+KLFFES+CGE+
Sbjct: 147 VLPSKTAIAPVNETFLPR--------------------VTQADLKLFFESICGEI 181
>gi|413921446|gb|AFW61378.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 206
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 103/169 (60%), Gaps = 25/169 (14%)
Query: 163 KRDMRELQELFSKLNPMAEEFVPPSLAKT---NNNNHG----------VNGF---NGGFF 206
+R+MR+L++L SKLNPMAEEFVPPSLA HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 207 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 257
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE 306
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDE
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDE 205
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 20/158 (12%)
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF--------------------TDEEG 308
TE+ LA F CG VVDCRIC +P S FAFIEF +
Sbjct: 93 TEKDLADRFRQCGAVVDCRICRNPRSEFLFAFIEFQYHANFEFHVKQNIKKQMLHPISDD 152
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 368
A AAL+L G +G V+V PS+TAI VNP+FL +++ E+EMC+RT+YCTNI+K VT A
Sbjct: 153 ASAALHLKGVTIGDRHVKVAPSRTAIMHVNPSFLAQSDGEKEMCSRTVYCTNIEKSVTCA 212
Query: 369 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIA 406
++ FF++ G V R+RLLGD +H T IAFVEF V A
Sbjct: 213 ELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSA 250
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGC-GQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+E+ RTVY ++I++ VT +L F G V R+ GD N V AF+EF +
Sbjct: 193 KEMCSRTVYCTNIEKSVTCAELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSADI 252
Query: 311 AALNLAGTMLGFYPVR 326
AAL G P+R
Sbjct: 253 AALRSIGIYARGLPIR 268
>gi|242044320|ref|XP_002460031.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
gi|241923408|gb|EER96552.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
Length = 288
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 113/208 (54%), Gaps = 25/208 (12%)
Query: 218 ARNGNVNANAAVRRKKSFGQGKRRMNS------RTSLAQREEIIRRTVYVSDIDQQVTEE 271
AR N A RR S ++ NS ++ +Q +E ++RT++V ID VTEE
Sbjct: 63 ARPNNSGTGRAARRPAS--NSRQDANSPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEE 120
Query: 272 QLAALFVGCGQVVDCRICGDPNSV-LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
LA +F G VVDCRICG P S LRF F+E E+ A A+L+L G+++G V V S
Sbjct: 121 TLACMFRLFGTVVDCRICGHPTSGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRS 180
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 390
+TAI P+NP FLP++E E E C RTIYCT+I K V RL+LL +
Sbjct: 181 RTAICPINPKFLPQSEAEWETCLRTIYCTSISKIVC----------------RLKLLDNG 224
Query: 391 HHSTRIAFVEFVMVIASSTLFIHTEFYI 418
ST IAF+EF V + + Y+
Sbjct: 225 ERSTNIAFIEFAEVDGAIAALMSGGIYV 252
>gi|414585783|tpg|DAA36354.1| TPA: hypothetical protein ZEAMMB73_057809 [Zea mays]
Length = 217
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%)
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 357
FAFIEF+DEEGAR ALNL GT+ GFYPVRVLPSKTA+ PVNP FLPRT+DE+EM RT+Y
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKFLPRTDDEKEMVMRTVY 119
Query: 358 CTNIDKKVTQADVKLFFESVCGE 380
TNIDK VTQ DV FFE +CGE
Sbjct: 120 RTNIDKMVTQLDVNKFFEELCGE 142
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 81/123 (65%), Gaps = 16/123 (13%)
Query: 268 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
VTEE LA LF+ CGQVV+CR+CGDPNSVLRFAFIEFTDE F P
Sbjct: 93 VTEENLATLFINCGQVVECRMCGDPNSVLRFAFIEFTDEVNET-----------FLPRVC 141
Query: 328 LPSKTAIAPVNP-----TFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 382
PS T + ++ ++DEREMCARTIY TNIDKKVTQAD+KLFFES+CGE+
Sbjct: 142 KPSGTNMLVLSSWLNVHALSDMSDDEREMCARTIYYTNIDKKVTQADLKLFFESICGELK 201
Query: 383 RLR 385
R
Sbjct: 202 VCR 204
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A+ ++ I+RT+YV+ ID Q+ E Q+ F CG++V+ R+CGD RFAF EF +E
Sbjct: 80 AEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDTQHPTRFAFFEFEQKES 139
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPV-----NPTFLPRTEDEREMCARTIYCTNIDK 363
A+AA++L+G LG Y +R+L S+T I P N T + RT+Y N D
Sbjct: 140 AQAAVSLSGQFLGRYALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQINRTVYVGNADI 199
Query: 364 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+T+ D+K FF++ CG V ++ L GD HS R AFVEF+ +
Sbjct: 200 SLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHM 240
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 24/128 (18%)
Query: 297 RFAFIEFTDEEGARAALNLAGT-MLGFY------------PVRVLPSKTAIAPVN----- 338
++AF+EF+ E A+ A+ L+GT +LG + P V + T I+P +
Sbjct: 8 KYAFVEFSSSEEAKVAIELSGTEILGKHLKISLSRSPISNPTPVQSNPTQISPTDDNATK 67
Query: 339 -----PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
+ L R +E + RTIY T+ID ++ +A V FF S CG + R+ GD H
Sbjct: 68 YQFLSESELKRKAEEDDKIKRTIYVTSIDTQILEAQVCEFF-SYCGRIVNYRVCGDTQHP 126
Query: 394 TRIAFVEF 401
TR AF EF
Sbjct: 127 TRFAFFEF 134
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
I RTVYV + D +TE+ L F CG V + GD RFAF+EF E AL
Sbjct: 188 INRTVYVGNADISLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHMESRNKAL 247
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
+GT+LG +R+ PS+T I
Sbjct: 248 ECSGTLLGNRNIRINPSRTPI 268
>gi|294460213|gb|ADE75689.1| unknown [Picea sitchensis]
Length = 79
Score = 127 bits (319), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/77 (75%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
Query: 319 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 378
MLG+YPVRVLPSKTAIAPVNPTFLPRTE+EREMCARTIYCTNIDKKV+Q+D+K FFE++C
Sbjct: 1 MLGYYPVRVLPSKTAIAPVNPTFLPRTEEEREMCARTIYCTNIDKKVSQSDLKAFFETLC 60
Query: 379 GEVYRL--RLLGDYHHS 393
G + RL Y HS
Sbjct: 61 GFSLEIAWRLSSFYSHS 77
>gi|414884993|tpg|DAA61007.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 317
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 98/189 (51%), Gaps = 46/189 (24%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ-------------------------- 282
+Q +E ++RT++V ID VTE+ LA LF G
Sbjct: 110 SQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTSYIVWDRKVNAYISTRWCIFFYITNR 169
Query: 283 --VVDCRICGDPNS--VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
VVDCRICGDP S LRF F+E E+ A A+L+L G ++ P+ V S+TAI P+N
Sbjct: 170 YTVVDCRICGDPTSDDGLRFGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPIN 229
Query: 339 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 398
P FLP++E E E C RTIYCTNI K V R+RLL + ST IAF
Sbjct: 230 PKFLPQSEAEWETCLRTIYCTNISKNVC----------------RVRLLDNKERSTNIAF 273
Query: 399 VEFVMVIAS 407
+EFV V +
Sbjct: 274 IEFVEVYGA 282
>gi|413944598|gb|AFW77247.1| hypothetical protein ZEAMMB73_128485 [Zea mays]
Length = 331
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 70/97 (72%)
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
C P++ + + +GAR ALNL GT+ GFYPVRVLPSKTAI PVNP FLPRT
Sbjct: 114 CSAAPPPSACSSVLHLLSSLMKGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRT 173
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 382
+DE+EM RT+Y TNIDK VTQ DVK FFE +CGE+Y
Sbjct: 174 DDEKEMVMRTVYRTNIDKMVTQLDVKKFFEELCGELY 210
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 64/80 (80%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
++ I V+ I VTEE L LF+ CGQVVDCR+CGDPNSVLRFAFIEF DEEGARA
Sbjct: 86 QDHILSLVFHLHISPHVTEENLTTLFINCGQVVDCRMCGDPNSVLRFAFIEFADEEGARA 145
Query: 312 ALNLAGTMLGFYPVRVLPSK 331
ALNL+GT+LG+YPV VLPSK
Sbjct: 146 ALNLSGTVLGYYPVNVLPSK 165
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGAR 310
E+ + TV+V D+ V+E +LA +F CG+++DCR+CGD N+ +AF+ F E
Sbjct: 1 EKAVPYTVFVKDVPASVSERELADVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVD 60
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL L T L + V S TA+ PVNP LP+ E E E CARTIY N+DK V +
Sbjct: 61 RALLLDKTPLHGKNIMVKKSDTAVIPVNPLLLPQNEREVESCARTIYVANVDKTVDSHAL 120
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
KL FE G V RL L + +AFVEFV
Sbjct: 121 KLLFEDRAGPVNRLHLQVKNNAVANVAFVEFV 152
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 250 QRE-EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEE 307
+RE E RT+YV+++D+ V L LF G V + N+V AF+EF D E
Sbjct: 96 EREVESCARTIYVANVDKTVDSHALKLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDLE 155
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAI 334
AL+L G LG +RV SKT +
Sbjct: 156 SVGTALHLTGEQLGNRMIRVSASKTPL 182
>gi|303278248|ref|XP_003058417.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459577|gb|EEH56872.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 187
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 83/150 (55%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E + V+VS++ V+E LA +F GCG+V+DCR CGD +FAF+ F
Sbjct: 6 EPTMWHNVHVSNVSLSVSESALARVFAGCGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQ 65
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L G ++ +RV SKTA+ PVNP LP +E + E C RT+Y +NID + D+K
Sbjct: 66 ALTLDGFVVDGRAIRVTRSKTAVIPVNPGLLPTSEADVERCGRTVYVSNIDPTTSDDDLK 125
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
FE+ G + R L R AF+EF
Sbjct: 126 RAFEANAGAIRRAHALSSSRRDARNAFIEF 155
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
RTVYVS+ID +++ L F G + R AFIEF + A +AL +
Sbjct: 108 RTVYVSNIDPTTSDDDLKRAFEANAGAIRRAHALSSSRRDARNAFIEFENASSAVSALGM 167
Query: 316 AGTMLGFYPVRVLPSKTAI 334
+G ++G VRV+PSKT +
Sbjct: 168 SGRVIGARKVRVVPSKTPL 186
>gi|224132620|ref|XP_002321367.1| predicted protein [Populus trichocarpa]
gi|222868363|gb|EEF05494.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 119 bits (298), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+EDERE+CARTIYCTNIDKK+TQADVKLFFES CGEV+RLRLLGDYHHSTRIAFVEF +
Sbjct: 2 SEDEREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVK 61
Query: 405 IAS 407
+ S
Sbjct: 62 LQS 64
Score = 42.4 bits (98), Expect = 0.42, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEF 303
EI RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EF
Sbjct: 7 EICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEF 58
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 212 IFNNHNARNGNVNANAAVRRKKSFGQGKRR--MNSRTSLAQREEIIR---RTVYVSDIDQ 266
++ N R GN N + RR S G G R + R S++ R TV+V +I
Sbjct: 146 LYAGPNGRVGN-NMDNQWRRANSDGSGGGRHTYHGRHSVSDERAGGRGSPNTVFVKEIPA 204
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
V+E +LA F CG++VDCR+C D NS +AF+ F + + AL+L L +
Sbjct: 205 SVSERELAETFAACGRIVDCRMCRDANSNKFSYAFVAFETADEVQNALSLDKMSLHGKNI 264
Query: 326 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
V S TA+ PVNP LP+ E E E ARTIY N+DK V +K FFE G V RL
Sbjct: 265 VVRRSDTAVIPVNPLLLPQNEAELESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLH 324
Query: 386 LLGDYHHSTRIAFVEFV-MVIASSTL 410
L +AFVEFV + A+S+L
Sbjct: 325 LQVKNAADANVAFVEFVNLESAASSL 350
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG- 317
VY+S+I + ++ L A+F CG+V + + +P S +AF+EF D E A+ ALN G
Sbjct: 403 VYISNIPKNLSPGTLRAMFSECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALNFRGR 462
Query: 318 --------TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
L + R + A+ PV + D+ E RT++ T+ID + +
Sbjct: 463 EVQGCAINIELTYNKKRRGAPRLALDPV-------SVDKME---RTVFVTDIDPDLEPSF 512
Query: 370 VKLFFESVCGEV----YRLRLLGDYHHSTRIAFVEFVMV 404
V+ FE CG V Y+ G+ I F E V
Sbjct: 513 VRSKFEDECGPVTLFWYKAFEKGEKQALAYIEFTELSSV 551
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 30/169 (17%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD-----CRICGDPNSVLRFAFIEFTDEE 307
E RT+YV+++D+ V + L F V+ + D N AF+EF + E
Sbjct: 289 ESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADAN----VAFVEFVNLE 344
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM---------------C 352
A ++L L G LG VRV SKT + VN R ++R M
Sbjct: 345 SAASSLRLTGKQLGQRVVRVSASKTPLR-VN----RRMSEQRAMSYYASGTNGDAATPPA 399
Query: 353 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y +NI K ++ ++ F S CG V + LL + AFVEF
Sbjct: 400 PTKVYISNIPKNLSPGTLRAMF-SECGRVTNVELLNNPKSKFPYAFVEF 447
>gi|413954118|gb|AFW86767.1| hypothetical protein ZEAMMB73_327506, partial [Zea mays]
Length = 81
Score = 112 bits (281), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
EGARAALNL+GT+LG+YP+ VL SKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKV
Sbjct: 14 EGARAALNLSGTVLGYYPINVLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKV 72
>gi|255079476|ref|XP_002503318.1| predicted protein [Micromonas sp. RCC299]
gi|226518584|gb|ACO64576.1| predicted protein [Micromonas sp. RCC299]
Length = 144
Score = 105 bits (262), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--------------NSVLRFAFIEF 303
TVYV +I +E + F CG V +CR+ DP N R AF+ F
Sbjct: 1 TVYVREIPAGASEADVHDHFYTCGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVAF 60
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
E R AL + G++L P++V+PS+T + PVNP LPRTE+ERE CART+Y +N+D
Sbjct: 61 ETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGLLPRTEEERERCARTVYVSNVDP 120
Query: 364 KVTQADVKLFFESVC-GEVYRLRL 386
V +++ E++ G++ L L
Sbjct: 121 DVRSNELRSALEAIADGKIAALHL 144
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 36/175 (20%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALNLA 316
TVYV+ +D Q+ EE + LF CG V + R+CG+ N RFAF+EF+ E A A+ L
Sbjct: 164 TVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRESALMAMGLT 223
Query: 317 GTMLGFYPVRVLPSKTAI--------------------------APVNPTFLPRTEDERE 350
+LG P++V+PSKTAI A +PT+ +E
Sbjct: 224 NIVLGNAPIKVMPSKTAIQAGSRGGGGGPGGGGGPRPPHHAHAAAAFDPTY-------QE 276
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMV 404
+RT+Y +D +++A++ F S G V +L + GD H R AFVEF V
Sbjct: 277 RASRTLYVGGVDSNLSEAELLQMF-SGFGTVTKLAMAGDTTVHQARFAFVEFSTV 330
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 58/201 (28%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
+RTVYV I + E L F C ++ R+ GDP+ RF FIEF EGA+ A N+
Sbjct: 13 QRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATPEGAQRACNM 72
Query: 316 AGTMLGFYPVRVLPSKTAI----------------------------------------- 334
G L +R+ SKTAI
Sbjct: 73 NGVELDGKKLRITLSKTAISSTSSHSGHSAHSAQSDASSAYASAAAGHMGLHAYGAAYGM 132
Query: 335 ------------APVNPTFLP-RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 381
A + P + P ++R C T+Y T +D ++ + V F S+CG V
Sbjct: 133 GYGAQGGMPYMHAGMPPAYAPAHGSNDRVAC--TVYVTGVDTQLREEHVIQLF-SLCGTV 189
Query: 382 YRLRLLGDYHH-STRIAFVEF 401
+R+ G+ + +TR AFVEF
Sbjct: 190 TNIRMCGETENKATRFAFVEF 210
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGAR 310
+E RT+YV +D ++E +L +F G G V + GD RFAF+EF+ A
Sbjct: 275 QERASRTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAH 334
Query: 311 AALNLAGTMLGFYPVRVLPSKTAI 334
AL + GT++G P+RV SKT I
Sbjct: 335 MALAMNGTVVGERPIRVSQSKTPI 358
>gi|224061487|ref|XP_002300504.1| predicted protein [Populus trichocarpa]
gi|222847762|gb|EEE85309.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 89/149 (59%), Gaps = 24/149 (16%)
Query: 106 MAVVESASQDSA--VSSAGSIPASNGQDHPKQNGGTMVMPLDQGL----------YNQNN 153
MAV E+ S D + + +SN QDH N ++ PL + YN ++
Sbjct: 1 MAVGENVSVDLGNFRAESSVSSSSNDQDHHIHNNNVLIQPLYMKVFQVGHHQAPPYNHHH 60
Query: 154 Q-RSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN----HGVNGFNGGFFAN 208
Q RSNGG +KR++RELQELFSKLNPMA EFVPPSL +NNN+ +G+NG NGGF+ N
Sbjct: 61 QQRSNGGESYKREIRELQELFSKLNPMAAEFVPPSL--SNNNSFGTVNGLNGVNGGFYGN 118
Query: 209 ----NSLIFNNHN-ARNGNVNANAAVRRK 232
N+L+ N + RNG VN NAA R K
Sbjct: 119 SSSSNNLVVNGNGFDRNGQVNGNAARRVK 147
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 12/168 (7%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC------GDPNSVL- 296
S +S+ RT+++S ID +E++L F G + + R+C + N+ L
Sbjct: 192 SNSSIVDANSAASRTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQ 251
Query: 297 -RFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRTEDEREMCAR 354
+FAFIE+ E + A+ + G++ G ++V SKTAI P + + + R++ R
Sbjct: 252 TKFAFIEYATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQTPPKKSLIDK--QYRDLVER 309
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
TI+ ID K++Q VK FFE +CG ++R+ + GD + TR F+EF
Sbjct: 310 TIHVGGIDVKLSQDHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEF 357
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RT+++ +I T E L LF GQV + ++ GDP+ RFAF+EF D A+ +L+L
Sbjct: 33 RTIHIGNISSYTTVESLQLLFSKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLSLD 92
Query: 317 GT 318
GT
Sbjct: 93 GT 94
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSV-LRFAFIEFTDEE 307
Q +++ RT++V ID +++++ + A F CG + + GD S RF FIEF D++
Sbjct: 302 QYRDLVERTIHVGGIDVKLSQDHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEFEDKQ 361
Query: 308 GARAALNLAGTMLG--FYPVRVLPSKTAIA 335
AL L+G + ++V PSK+ I
Sbjct: 362 STLRALRLSGCTIAGSVKQIKVSPSKSPIG 391
>gi|238008810|gb|ACR35440.1| unknown [Zea mays]
Length = 92
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/52 (78%), Positives = 43/52 (82%)
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
M RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD HSTRIAFVEFV
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFV 52
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ RTVY ++ID+ VT+ + F CG+V R+ GD R AF+EF EGA A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAP 336
LN +G +LG PVRV PSKT + P
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKP 84
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 16/180 (8%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A + E IRRTV+V+++D ++T E L + F CG + R+ GD R+A+IEF + +
Sbjct: 153 ANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQA 212
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 368
+AL +G + G P++V SK A++ P P+ D + C + KV A
Sbjct: 213 IVSALQYSGAIFGGKPIKVTHSKNAVS--KPP--PKHSDRKRACFGVFNGMGVQVKVLHA 268
Query: 369 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHT---EFYILHNPSIA 425
+ SVC +Y++ L+G H V+V + +H E + H P A
Sbjct: 269 ---RWLHSVCHCLYQMVLVGRTGHG------RLVVVTDPDLIPVHAVAIEDALDHAPGTA 319
>gi|413926011|gb|AFW65943.1| hypothetical protein ZEAMMB73_108884 [Zea mays]
Length = 92
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 41/51 (80%)
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
M +RT+YCTNIDKKVT+ DVK FF+ CG+V RLRLL D HST IAFVEF
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEF 51
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ RTVY ++ID++VTEE + F CG+V R+ D AF+EF E A A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNP 339
LN +G +LG P+RV PSKT + P +P
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSP 87
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 381
+++DE EMCARTIYCTNIDKKVTQAD+KLFFES+CGE+
Sbjct: 178 QSDDECEMCARTIYCTNIDKKVTQADLKLFFESICGEI 215
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 309
++++ I RT+YV +++ +T EQL F CG + CR+ GD + RFAFIEF +E A
Sbjct: 169 EKQDEIARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIEFATKEAA 228
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTED 347
+AA+ L GTML V+V SK I V P P+T D
Sbjct: 229 QAAMMLNGTMLLDRAVKVNHSKNPI--VKP---PKTVD 261
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
TV V++I TE+ L F CG +V + GD + ++AF+ F A AAL L+
Sbjct: 39 TVIVTNISPLATEQDLRDFFANCGNIVQINLLGDGLGISQYAFVRFETMAQANAALTLST 98
Query: 318 TMLGFYPVRV-----------------------------------------LPSKTAIAP 336
+ PV++ +P A+
Sbjct: 99 GAVAGMPVKIVMAASDIPVGGAAAAATAALPTPLALTPGVGAASGLGLLGAIPHSLALLS 158
Query: 337 VNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 396
+P ++++ ARTIY N++ +T + FF ++CG + RL GD H +R
Sbjct: 159 GSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFF-AICGPITFCRLAGDESHPSRF 217
Query: 397 AFVEF 401
AF+EF
Sbjct: 218 AFIEF 222
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 329 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 388
P + PV P F T+ TNI T+ D++ FF + CG + ++ LLG
Sbjct: 23 PGSDGLLPVPPQF----------SVSTVIVTNISPLATEQDLRDFFAN-CGNIVQINLLG 71
Query: 389 DYHHSTRIAFVEF-VMVIASSTLFIHT 414
D ++ AFV F M A++ L + T
Sbjct: 72 DGLGISQYAFVRFETMAQANAALTLST 98
>gi|255638879|gb|ACU19742.1| unknown [Glycine max]
Length = 179
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 157 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGF-FANNSLIFN 214
NGG FKRDMR+L+EL SKLNPMAEEFVPPSLA T HG + G N GF + NN ++ N
Sbjct: 89 NGGESFKRDMRDLEELLSKLNPMAEEFVPPSLANT----HGLLAGPNAGFGYTNNFILPN 144
Query: 215 NHNARNGNVN 224
N+ NG N
Sbjct: 145 NYGNTNGQTN 154
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 263 DIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGARAALNLAGTML 320
++ +Q+TEE L F G +V + C + N +++ + ++F D E A AL+L GT+L
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC-EANPLVQESLVQFQDSEDAALALHLTGTVL 80
Query: 321 GFYPVRVLPSKTAI-----------APVNPT----FLP--------------RTEDEREM 351
+ + P I P NPT +P T ++
Sbjct: 81 ADKALFITPPSAKIQSFNSHGYLNIPPPNPTAPGVLVPGSMAGSTIVPYGQTATIAGQDS 140
Query: 352 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RTIY NI ++Q +V + F S CG+V ++++ GD HSTR AF+EF
Sbjct: 141 VDRTIYTGNIHSGLSQQEVSMLFSS-CGDVTQVKMAGDATHSTRYAFIEFA 190
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 245 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFT 304
+T+ ++ + RT+Y +I +++++++ LF CG V ++ GD R+AFIEF
Sbjct: 131 QTATIAGQDSVDRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFA 190
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIA 335
E A ALNL G M+ ++V SK +I
Sbjct: 191 TSESAAMALNLHGMMVAGRAIKVNRSKHSIG 221
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
++DEREMCARTIY TNIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 299 SDDEREMCARTIYRTNIDKKVTQADLKLFFESICGELKVCR 339
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 385
+++DEREMCARTIYCTNIDKKVTQ D KLFFES CGE+ R
Sbjct: 261 QSDDEREMCARTIYCTNIDKKVTQTDPKLFFESKCGELKVCR 302
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RT+YV ++ ++V E L ALF CG V RI GDP+ R+AFIEFT E ++ A+ L
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTRYAFIEFTTPEESQTAMMLD 65
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID-KKVTQADVKLFFE 375
G M+ +RV ++ P + R+ D + RTI+ + ++++ + +F
Sbjct: 66 GMMVFERQIRVNMARGGSGP----GVVRSNDP-DRVQRTIHIGGLPFDELSEESISDYFS 120
Query: 376 SVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASST 409
++ GEV +R S R A+VEF + A+ T
Sbjct: 121 NI-GEVNAVR------KSGRFAWVEFNTLQAAQT 147
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 255 IRRTVYVSDID-QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
++RT+++ + +++EE ++ F G+V R G RFA++EF + A+ A+
Sbjct: 96 VQRTIHIGGLPFDELSEESISDYFSNIGEVNAVRKSG------RFAWVEFNTLQAAQTAM 149
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
+L G LG ++V SKT I
Sbjct: 150 SLDGESLGSGTMKVSASKTPI 170
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
IRRT+YV ++ + +Q+ F CG++ R+ GD RFAF+EF + E + AL
Sbjct: 41 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 100
Query: 315 LAGTMLGFYPVRVLPSKTAI 334
G M G P++V SK AI
Sbjct: 101 YNGAMFGDRPIKVNHSKNAI 120
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 331 KTAIAPVNPTFLPRT----EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
++A APV P+ P T + + RTIY N+ + V FF++ CGE+ +R+
Sbjct: 16 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 74
Query: 387 LGDYHHSTRIAFVEFV 402
GD TR AFVEF
Sbjct: 75 AGDETQPTRFAFVEFA 90
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQ-VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E IRRT+YV ++D Q VT EQL F G+V R+ GD RFAF+EF+D+ A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL G M G P+++ S AI
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAI 248
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E RTIY N+D + A+ L F S GEV +R+ GD TR AFVEF
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEF 217
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ I R++ V+V +D V ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPIQRKSGMNNVFVKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----RT 355
F++F +GA+AAL + G+ LG V V P FL R +RE+ A R
Sbjct: 143 FVQFETADGAKAALEMDGSKLGDCEVVVAP-----------FLRRV--DREVMAAKSFRN 189
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
IY N+ V +ADVK E+ G+V L L T+ A V F
Sbjct: 190 IYIKNLKATVAEADVKTTVETF-GKVNSLFLSEHAPFPTKFALVAF 234
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 313
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
IRRT+YV ++ + +Q+ F CG++ R+ GD RFAF+EF + E + AL
Sbjct: 109 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 168
Query: 315 LAGTMLGFYPVRVLPSKTAI 334
G M G P++V SK AI
Sbjct: 169 YNGAMFGDRPIKVNHSKNAI 188
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 331 KTAIAPVNPTFLPRT----EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
++A APV P+ P T + + RTIY N+ + V FF++ CGE+ +R+
Sbjct: 84 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 142
Query: 387 LGDYHHSTRIAFVEFV 402
GD TR AFVEF
Sbjct: 143 AGDETQPTRFAFVEFA 158
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
IRRT+YV ++ + +Q+ F+ CG++ R+ GD RFAF+EF + E + AL
Sbjct: 174 IRRTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQ 233
Query: 315 LAGTMLGFYPVRVLPSKTAI 334
G M G P++V SK AI
Sbjct: 234 YNGAMFGDRPIKVNHSKNAI 253
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 331 KTAIAPVNPTFLPRT----EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
++A APV P+ P T + + RTIY N+ + AD + F CGE+ +R+
Sbjct: 149 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTL-HADQVMNFFLTCGEIKYVRM 207
Query: 387 LGDYHHSTRIAFVEFV 402
GD TR AFVEF
Sbjct: 208 AGDEMQPTRFAFVEFA 223
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----RT 355
F++F EGA+AAL++ G+ LG S+ +AP F+ R +RE+ A R
Sbjct: 143 FVQFETAEGAKAALDMNGSKLG-------DSEVVVAP----FVRRV--DREVMAAKSFRN 189
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
IY NI T+ADVK E G+V L L T+ A V F
Sbjct: 190 IYIKNIAAAATEADVKAAAEKF-GKVNSLFLSEHAPFPTKFALVAF 234
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 313
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----RT 355
F++F EGA+AAL++ G+ LG S+ +AP F+ R +RE+ A R
Sbjct: 143 FVQFETAEGAKAALDMNGSKLG-------DSEVVVAP----FVRRV--DREVMAAKSFRN 189
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
IY NI T+ADVK E G+V L L T+ A V F
Sbjct: 190 IYIKNIAAAATEADVKAAAEKF-GKVNSLFLSEHAPFPTKFALVAF 234
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 313
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|428166786|gb|EKX35755.1| hypothetical protein GUITHDRAFT_118030 [Guillardia theta CCMP2712]
Length = 254
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 13/95 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGD-PNSVLRF-----AFIEFTDEEGAR 310
T+YV +++ +T EQL F CGQV+ R+ GD P + RF AF++F +E A
Sbjct: 21 TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLSKEQAD 80
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
A+ L+GT+LG P++ P+K NP PR+
Sbjct: 81 IAMTLSGTILGGLPIKCGPAK------NPIVQPRS 109
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 334 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
I P P E C TIY N++ +T + FF +VCG+V +R+ GD +
Sbjct: 2 IGPYGPNHTAALLAEGASC--TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPAT 59
Query: 394 ------TRIAFVEFV 402
TR AFV+F+
Sbjct: 60 AFRFDRTRFAFVQFL 74
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARA 311
E +RTV+V ++D V E+ L F CG + D R+ P+ + FA+IEF ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 312 ALNLAGTMLGFYPVRVLP----SKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVT 366
AL+ + PV V P SKTA+ P + T F P RT++ +D T
Sbjct: 746 ALSKDRQFMNGRPVLVDPCVDRSKTALRPKHQTGFDP----------RTVFVKRLDHSCT 795
Query: 367 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFI 412
+ DV+ FE G V +R++ R A+VEF ++T +
Sbjct: 796 EQDVRTLFEQY-GAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIM 841
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RTI 356
F++F +G +AAL + G+ LG S+ +AP F+ R D M A R I
Sbjct: 143 FVQFETADGTKAALEMNGSKLG-------DSEVVVAP----FVRRV-DREAMAAKSFRNI 190
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
Y NI T+ADVK E G+V L L T+ A V F
Sbjct: 191 YIKNITASATEADVKAIVEEF-GKVDSLFLSEHARFPTKFALVAF 234
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 313
R +Y+ + +T+++L +F G++ C I +PN L+ FAF+ F D++ A AAL
Sbjct: 289 RNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAAL 346
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 255 IRRTVYVSDID-QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
I+RT+YV ++D +Q T +QL F CG+V R+ GD RFAFIEF E +A+
Sbjct: 118 IKRTIYVGNLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAM 177
Query: 314 NLAGTMLGFYPVRVLPS-----KTAIAPVNPT 340
L GT+ G +++ S K A+ PVN T
Sbjct: 178 KLNGTLFGDRALKINHSNNAIVKPAVKPVNDT 209
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICG---DPNSV-LRFAFIEFTDEEGARAALN 314
+ V++I T EQ+ LF G V+ + DPN+ + AFI++ D A +
Sbjct: 7 IQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNPGTKVAFIKYADPSSVGVAQH 66
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFL----PRT----------EDEREMCARTIYCTN 360
L T+ + +P I P + P T + + + RTIY N
Sbjct: 67 LTSTVFIDRALICVPYTDGIIPNETVAMQFATPATALIQAGGVIDQTKLDEIKRTIYVGN 126
Query: 361 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
+D K AD + F CGEV +R+ GD TR AF+EF +
Sbjct: 127 LDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKI 170
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
IRRT++V ++D T EQL F G+V R+ GD RFAF+EFT++ AL
Sbjct: 165 IRRTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALV 224
Query: 315 LAGTMLGFYPVRVLPSKTAI 334
L G++ PVRV S AI
Sbjct: 225 LNGSLFSGRPVRVNHSNVAI 244
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T EQL F G V R+ GD RFAF+EF ++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARAL 222
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
L G M G P++V S AI V P L
Sbjct: 223 TLNGVMFGDRPLKVNHSNNAI--VKPPEL 249
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T A+ L F G+V +R+ GD TR AFVEFV
Sbjct: 165 RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFV 213
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGAR 310
E I VYV I TE+ + + F GCG + VDC D A I F E A+
Sbjct: 191 EDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAK 250
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL+L G+ +G + +++ P KT P F P + IY N+ +T+ D+
Sbjct: 251 RALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGIVE----GYNRIYVGNLSWDITEDDL 306
Query: 371 KLFF 374
K FF
Sbjct: 307 KKFF 310
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
++R E IRRT+ ++D+ VT+++L F G V R C N + R+A +E++++
Sbjct: 167 SRRIEEIRRTLAAINVDENVTDDELIGFFQKAGDVKYVRWCSRENDITRYALVEYSEQAS 226
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIA 335
A L L G LG PV+V + AIA
Sbjct: 227 VIAGLKLNGVQLGSRPVQVTHATQAIA 253
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 143 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 202
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 203 AFNGVMFGDRPLKINHSNNAI 223
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 193
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRT+YV +++ Q T EQL F G V R+ GD RFAF+EF+D+ AL
Sbjct: 200 IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRAL 259
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 260 TFNGVMFGDRPLKINHSNNAI 280
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 24/125 (19%)
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDEREM- 351
SVLR +E L++ T LG P + P T +APV P P ++
Sbjct: 132 SVLRREKVEV-------PLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPAVADLP 184
Query: 352 ---------------CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 396
RTIY N++ + T A+ L F G+V +R+ GD TR
Sbjct: 185 QPPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRF 244
Query: 397 AFVEF 401
AFVEF
Sbjct: 245 AFVEF 249
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 44 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 103
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 104 AFNGVMFGDRPLKINHSNNAI 124
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 15 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 62
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 63 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 94
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG +P + V+P+ + DE RT+Y N++ + T AD
Sbjct: 35 AALDPNITALGE-----IPQPPIMGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 82
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 83 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 255 IRRTVYVSDIDQQ-VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF D++ AL
Sbjct: 166 IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARAL 225
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
G M G P+++ S AI V P L
Sbjct: 226 TYNGVMFGDRPLKINHSNNAI--VKPPEL 252
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 325 VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL 384
V L + +A P+ P DE RT+Y N++ + T AD L F G+V +
Sbjct: 142 VATLSAVSAQPPLMGNVDPSKVDE---IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFV 198
Query: 385 RLLGDYHHSTRIAFVEFV 402
R+ GD TR AFVEF
Sbjct: 199 RMAGDETQPTRFAFVEFA 216
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 82 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 141
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 142 AFNGVMFGDRPLKINHSNNAI 162
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 132
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 207 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 266
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 267 AFNGVMFGDRPLKINHSNNAI 287
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 257
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF+++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARAL 222
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 223 TFNGVMFGDRPLKINHSNNAI 243
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
RT+Y N++ + T AD L F G V +R+ GD TR AFVEF
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEF 212
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 151 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 198
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 199 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 222
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 223 AFNGVMFGDRPLKINHSNNAI 243
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 213
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG +P + V+P+ + DE RT+Y N++ + T AD
Sbjct: 151 AALDPNITALG-----EIPQPPIMGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 198
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 199 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 154 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 201
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 202 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 145 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 204
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 205 AFNGVMFGDRPLKINHSNNAI 225
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 116 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 163
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 164 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 195
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 320 LGFYPVRVL-PSKTAIA-----PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
LG P L P+ TA+ P+ P DE RT+Y N++ + T AD L
Sbjct: 145 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 201
Query: 374 FESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
F GEV +R+ GD TR AFVEF
Sbjct: 202 FFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQ-VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV ++D VT EQL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 206 IRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKAL 265
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 266 QYNGIMFGNRPLKINHSNNAI 286
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N+D A+ L F GEV +R+ GD TR AFVEF
Sbjct: 208 RTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFA 256
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 199 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 258
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 259 AFNGVMFGDRPLKINHSNNAI 279
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 170 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 217
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 218 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 249
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 63 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 110
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 111 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 142
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 154 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 201
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
L F GEV +R+ GD TR AFVEF
Sbjct: 202 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T A+ EEI RRTVYV ++ + VT EQL + F G+V R+ GD + A++EFTD
Sbjct: 154 TDPAKIEEI-RRTVYVGNLAKNVTTEQLLSFFSQVGEVKYVRMAGDEKQPTKNAYVEFTD 212
Query: 306 EEGARAALNLAGTMLGFYPVRV 327
+ AL G M P+ V
Sbjct: 213 QRSISTALTYNGVMFQTLPISV 234
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 60/209 (28%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-----CGDPNSVLRFAFIEFTDE 306
E+I + + +++I T++Q+ LF G++ +C++ + ++ + ++++ D
Sbjct: 3 EKITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTSTKVCYVKYDDS 62
Query: 307 EGARAALNLAGT------------MLGFYP-----VRVLPSKTA-IAPVNPTF------- 341
+ AL+L T M G P +++ PS A + P P++
Sbjct: 63 VSSGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVISQ 122
Query: 342 ---------------------------LPRTEDER--EMCARTIYCTNIDKKVTQADVKL 372
LP D E RT+Y N+ K VT +
Sbjct: 123 MTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQLLS 182
Query: 373 FFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
FF V GEV +R+ GD T+ A+VEF
Sbjct: 183 FFSQV-GEVKYVRMAGDEKQPTKNAYVEF 210
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 218 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 277
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 278 AFNGVMFGDRPLKINHSNNAI 298
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 268
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEF 229
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEF 229
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R A R+ + R++ ++V +D V+ + L A F CG+V+ C++ D + +
Sbjct: 83 RVMFAIRDPLQRKSGANNIFVKKLDAAVSAKALQAAFSRCGRVLSCKVALDSEGHSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RTI 356
F++F +GA+AAL++ G +G V V P F+ R D M A R I
Sbjct: 143 FVQFETADGAKAALDMNGAKVGDSEVEVAP-----------FVRRV-DREAMAAKSFRNI 190
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
Y NI T+ D++ E G+V L L T+ A F
Sbjct: 191 YIKNIKATATEVDMRTTLEKF-GKVTSLFLAEHAPFLTKFALAVF 234
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 313
R +YV + +T+++L +F G++ C I + N LR FAF+ F D++ A AA+
Sbjct: 289 RNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAM 346
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 58.2 bits (139), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEE 307
A + E RTV+V ++D VTE++L A F CG++VD R+ + + +A++EF
Sbjct: 642 AHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASAS 701
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVT 366
AL+ ++G P+ V + P+ T D+ ++++ N+D K +
Sbjct: 702 AVNPALSKDRQIMGTRPMLV--DRYVDRSQMPSLPFKHTTDKN---PKSLFVKNLDYKAS 756
Query: 367 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
+A++K F G V +RL+ + S R +V+FV
Sbjct: 757 EAEIKDLFNK-HGAVEAVRLVTKFDGSRRDFCYVDFV 792
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF +++ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARAL 222
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P++V S AI
Sbjct: 223 TFNGVMFGDRPLKVNHSNNAI 243
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F G+V +R+ GD TR AFVEFV
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFV 213
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 45 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 101
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 102 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 179 IRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 238
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
G + G P+++ S AI V P L
Sbjct: 239 AFNGVVFGDRPLKINHSNNAI--VKPPEL 265
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 181 RTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFA 229
>gi|86170621|ref|XP_966051.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362293|emb|CAG25231.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 582
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 237 QGKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 293
Q KR ++ + SL ++ ++ + VY+ +I ++ EE + A F G ++ +
Sbjct: 131 QKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNVGNTTSYKLQYNEQ 190
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 325
+ AF+EF +EE A+AALNL+GT +G + +
Sbjct: 191 KKVHTAFVEFKNEEHAKAALNLSGTKVGLHEI 222
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 68/195 (34%), Gaps = 49/195 (25%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
I VYV ++ +TEE + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSSDITEENIREKFGSCDEIISITFKNFPGLNQKYCQIEFKTSEGITNASR 66
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER------------------------- 349
L G L P+ V + I N + L TE ++
Sbjct: 67 LNGESLLNVPMVVSVIEPIINNTNLSELSTTECDKNVNSLLDVRNSITNQGVQTLLLQKQ 126
Query: 350 -----------------------EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 386
++ ++ +Y NI +K + D+K FF++V G +L
Sbjct: 127 VISEQKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNV-GNTTSYKL 185
Query: 387 LGDYHHSTRIAFVEF 401
+ AFVEF
Sbjct: 186 QYNEQKKVHTAFVEF 200
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 132 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 191
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 192 AFNGVMFGDRPLKINHSNNAI 212
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 134 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEF 181
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 106
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 107 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 106
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 107 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 222 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 278
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 279 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 309
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAF 300
MN + +R+ RTV+V ++ VTE+++ +F CG V D R+ + + + +
Sbjct: 603 MNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCY 662
Query: 301 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCT 359
+EF DEE A+ AL + P+ V PSK + AP FL E +M ++ +
Sbjct: 663 VEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFL----YENKMEKNKLFVS 718
Query: 360 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF---------VMVIASST 409
+ + +T +++ F S G++ +R++ + +A+V+F VM + ++
Sbjct: 719 GLPRTLTTEELEKTF-SKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATRAVMGLDNTQ 777
Query: 410 LFIHTEFYILHNP 422
+ HT + NP
Sbjct: 778 IGEHTITVAISNP 790
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 51 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 107
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT--FLPRT 345
EF+D+E R +L L ++ ++V+P +T ++ T PRT
Sbjct: 108 EFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRT 153
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 255 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 314 NLAGTMLGFYPVRVLPSKTAI 334
G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 354 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEF 141
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A++E+ +++T++VS++ +T EQL LF CG VV+C I +S A+IE++ E
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHS----AYIEYSKPEE 396
Query: 309 ARAALNLAGTMLGFYPVRVLPSKT 332
A AAL L +G P+ V +K+
Sbjct: 397 ATAALALNNMDVGGRPLNVETAKS 420
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+DQ VT+ QL LF GQVV R+C D ++ L + ++ +++++ A A+++
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ + +++ +PT +R+ A I+ N+DK + D+K E
Sbjct: 101 ----LNFTPLNNKTIRVSVSRRDPT-------DRKSGAGNIFIKNLDKSI---DIKALHE 146
Query: 376 SVC--GEVYRLRLLGDYH-HSTRIAFVEF 401
+ G + ++ D S FV++
Sbjct: 147 TFSSFGTIISCKIATDASGQSKGYGFVQY 175
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 324 LYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMN 383
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 384 GKMIVSKPLYV 394
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A++ E +++ V +S++ +T E + LF CG+VVDC I A++E++ E
Sbjct: 357 AEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTIT----ESKHIAYVEYSKPEE 412
Query: 309 ARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 338
A AAL L+ +G P+ V LP KT+IA N
Sbjct: 413 ATAALALSNVDVGGRPLNVEMAKSLPQKTSIANSN 447
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 20 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 76
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 77 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 107
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 160 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 216
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 217 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 247
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 90
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 91 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 45 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 101
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 102 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 90
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 91 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
+ ++RT+ VS++ +T EQL LF CG VV+C I FA+IE++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTIT----DSKHFAYIEYSKPEEATAA 389
Query: 313 LNLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 341
L L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E IRRT+YV ++D +T E + F CG++ R+ G+ + ++ AF+EFT++ A
Sbjct: 164 EEIRRTIYVGNLDPNLTNEIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNA 223
Query: 313 LNLAGTMLG 321
GT+LG
Sbjct: 224 FQFNGTLLG 232
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 335 APVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
AP P DE E RTIY N+D +T V FF S CGE+ +R+ G+ S
Sbjct: 148 APNYPALPAGLSDENVEEIRRTIYVGNLDPNLTNEIVMKFF-SQCGEIKYVRMGGETGAS 206
Query: 394 TRIAFVEFV 402
+ AFVEF
Sbjct: 207 MKHAFVEFT 215
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL----RFAFIEFTDEEGARAA 312
R + VS+I V+ EQL ALF G V DCR+ L R +I+F + A
Sbjct: 8 RVIQVSNIASGVSREQLLALFNHVGSVEDCRLYPSVEQPLENGTRICYIKFKELWSVGVA 67
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAP 336
++L+ T+ P+ + P + P
Sbjct: 68 MHLSNTIFMERPLLIFPMDSDQVP 91
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
+ ++RT+ VS++ +T EQL LF CG VV+C I FA+IE++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTIT----DSKHFAYIEYSKPEEATAA 389
Query: 313 LNLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 341
L L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D++Q VTE QL LF GQ+V R+C D S L + ++ + + A
Sbjct: 25 QFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAA 84
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL + L F PV P + + +PT R+ A IY N+DK + +
Sbjct: 85 QALEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGAGNIYIKNLDKAIDNKAL 133
Query: 371 KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 134 HDTF-SAFGNILSCKVATDSAGQSLGYGFVQF 164
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD-PNSVLRFA 299
R + R+ IR++ +Y+ ++D+ + + L F G ++ C++ D L +
Sbjct: 101 RIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILSCKVATDSAGQSLGYG 160
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER---EMCART 355
F++F +EE A+ A++ L G +L V V P FL R E E +
Sbjct: 161 FVQFDNEESAKNAIDKLNGMLLNDKQVYVGP-----------FLRRQERESGTDKTKFNN 209
Query: 356 IYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 210 VYVKNLSETTTEEDLKKIF 228
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSL-AQREEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ L Q E+ ++ TV YV ++D +T+++L LF G + C
Sbjct: 281 GKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKLKELFSEFGTITSC 340
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 327
++ DPN V + + F+ + T EE ++A + G M+ P+ V
Sbjct: 341 KVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYV 383
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 64 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 120
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 121 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 151
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+ + +++T+ VS++ +T EQL LF CG VV+C I FA+IE++ E A
Sbjct: 337 KADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSIT----DSKHFAYIEYSKPEEAT 392
Query: 311 AALNLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 343
AAL L +G P+ V LP K AI +P+ LP
Sbjct: 393 AALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 144 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 200
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 201 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 231
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 310
+ + +++T+ VS++ +T EQL LF CG VV+C I + FA+IE++ E A
Sbjct: 337 KADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEAT 392
Query: 311 AALNLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 343
AAL L +G P+ V LP K AI +P+ LP
Sbjct: 393 AALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A++E+ +++T++VS++ +T EQL LF CG VV+C I +S A+IE++ E
Sbjct: 315 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHS----AYIEYSKPEE 370
Query: 309 ARAALNLAGTMLGFYPVRV-----LPSK 331
A AAL L +G P+ V LP K
Sbjct: 371 ATAALALNNMDVGGRPLNVEMAKSLPQK 398
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 164 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 220
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 221 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 251
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 188 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 218
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 129 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 185
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 186 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 216
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 314
+ V+V + +T E L F CG++V R+ D F +++F D GA+AAL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE--DEREMCARTIYCTNIDKKVTQADVKL 372
+AGT L + V S P P+ + DE ++T++ N+ + TQ V
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWE 407
Query: 373 FFESVCGEVYRLRLLGDYH--HSTRIAFVEF 401
F S G V +R+ D A+VEF
Sbjct: 408 SF-SDFGGVNSVRVPTDMETGRPKGFAYVEF 437
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF 303
S+ + + ++YV D++ VT+ QL LF GQVV R+C D NS L +A++ F
Sbjct: 26 VSVGVAQPLPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNF 85
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
++ A AL ML F P+ P + + +P+ R + I+ N+DK
Sbjct: 86 SNPMDAARALE----MLNFVPLNNKPIRVMYSNRDPS-------SRRSGSANIFIKNLDK 134
Query: 364 KVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+ + F S G + ++ D S FV++
Sbjct: 135 TIDNKTLHDTF-SAFGAILSCKVATDDMGQSKGFGFVQY 172
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALN 314
+ +Y+ ++D ++++QL LF G++ C++ D N V + + F+ F T EE ++A
Sbjct: 319 QNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITE 378
Query: 315 LAGTMLGFYPVRV 327
+ G ML P+ V
Sbjct: 379 MNGKMLSGKPLYV 391
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 306
A ++ + ++YV D++ VT+ QL LF GQVV R+C D NS L +A++ +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 307 -EGARA--ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
+ ARA ALN A L P+RV+ S R R + I+ N+DK
Sbjct: 174 MDAARAMEALNFA--PLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDK 219
Query: 364 KVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+ + F S G + ++ + D S FV++
Sbjct: 220 TIDNKTLHDTF-SAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +T++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 466 GKMISGKPLYV 476
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 306
A ++ + ++YV D++ VT+ QL LF GQVV R+C D NS L +A++ +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 307 -EGARA--ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
+ ARA ALN A L P+RV+ S R R + I+ N+DK
Sbjct: 174 MDAARAMEALNFA--PLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDK 219
Query: 364 KVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+ + F S G + ++ + D S FV++
Sbjct: 220 TIDNKTLHDTF-SAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +T++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 466 GKMISGKPLYV 476
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E IRRTVYV ++D T EQL F G+V R+ G + RFAF+EFT++ A
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFFSQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRA 130
Query: 313 LNLAG 317
L G
Sbjct: 131 LQFNG 135
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
E RT+Y N+D T + FF S GEV +R+ G TR AFVEF
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFF-SQMGEVKYVRMAGGESQPTRFAFVEFT 122
>gi|413916837|gb|AFW56769.1| hypothetical protein ZEAMMB73_720605 [Zea mays]
Length = 318
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 11/52 (21%)
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRL-----------LGDYHHSTR 395
TIY TNIDKKVT+AD+KLFFES+CGEV R L L +HH R
Sbjct: 255 TIYRTNIDKKVTEADLKLFFESICGEVGRSLLQTQSPFCIAKSLQKWHHQDR 306
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 228 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 284
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 285 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 315
>gi|449691485|ref|XP_002170081.2| PREDICTED: uncharacterized protein LOC100212876, partial [Hydra
magnipapillata]
Length = 312
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAAL 313
IRRTV+V +I +T +QL A F G G+V R+C GD ++AF+EFT + AL
Sbjct: 23 IRRTVFVQNIPPDITADQLMAFFSGVGEVKYLRLCKGDSG---KYAFVEFTAIDSVPTAL 79
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
G + G ++V SK +P P +E
Sbjct: 80 QYNGVLFGGRCLKVDYSK------HPIIKPESE 106
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 221 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 277
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 278 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 308
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+ RTVY +++ +TE+ LA F G V + G + RF F+EFTD+ A AA
Sbjct: 294 VARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAKA 353
Query: 315 LAGTMLGFYPVRV 327
L+GTML ++V
Sbjct: 354 LSGTMLAEMTLKV 366
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R+VYV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 91 SLEDKVEVDARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 147
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
E+ D++ + +L L ++ ++VLP +T
Sbjct: 148 EYADKDSVQTSLALDESLFKGRQIKVLPKRT 178
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E +RRT +VS+ +T EQ+ LF CG +V+CR + S FAFIEF + A AA
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR---EGPSGKNFAFIEFESNKEALAA 337
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
L L G +G +RV +KT P +PR
Sbjct: 338 LALNGMNVGGRNIRVELAKT------PRLMPRA 364
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 194 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 250
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R ++ L ++ ++V+P +T
Sbjct: 251 EFSDKESVRTSMALDESLFRGRQIKVIPKRT 281
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
+R + R+VYV ++D T ++L F GCG V + C R G P FA+IEF+
Sbjct: 72 ERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFS 128
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
D A++A+ L TM ++VLP +T + ++ T
Sbjct: 129 DRSAAQSAVGLHETMFRGRVLKVLPKRTNMPGISTT 164
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
++ ++YV D+D VT+ QL LF GQVV RIC D S L + ++ F++ A
Sbjct: 20 QLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAA 79
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A+++ L F P+ P + + +P+ R+ A I+ N+D+ + D
Sbjct: 80 KAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---DH 125
Query: 371 KLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
K ++ S+ G + ++ D ++ FV+F
Sbjct: 126 KALYDTFSIFGNILSCKIAMDASGLSKGYGFVQF 159
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ ++ L +R E+ ++ TV Y+ ++D VT+E+L+ LF G V C
Sbjct: 276 GKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSC 335
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRVLPSK 331
+I DP + R + F+ F T EE RA + G M+ P+ V P++
Sbjct: 336 KILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQ 382
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ +R++ +++ ++D+ + + L F G ++ C+I D + + + +
Sbjct: 96 RIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYG 155
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--- 355
F++F +EE A++A++ L G +L PV V R +D +
Sbjct: 156 FVQFENEESAQSAIDKLNGMLLNDKPVYV------------GHFQRKQDRDNALSNAKFN 203
Query: 356 -IYCTNIDKKVTQADVK 371
+Y N+ + VT D+K
Sbjct: 204 NVYVKNLSESVTDDDLK 220
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 301
SL ++ E+ R++YV ++D T E+L F GCG + I G P FA+I
Sbjct: 88 SLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D + + A+ + ++ P++V+P +T
Sbjct: 145 EFGDRDSVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D++ VT+ QL LF GQVV R+C D S L + ++ +++ + A A
Sbjct: 23 VTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L ML F P+ P + + +PT R+ A I+ N+DK + +
Sbjct: 83 LE----MLNFTPLNGSPIRVMYSHRDPTI-------RKSGAGNIFIKNLDKAIDHKALHD 131
Query: 373 FFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 132 TF-SAFGNILSCKVATDPSGQSKGYGFVQF 160
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +E+L LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 309 LYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 317 GTMLGFYPVRV 327
G ++ P+ V
Sbjct: 369 GKIVVSKPLYV 379
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C++ DP+ + +
Sbjct: 97 RVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYG 156
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER---EMCART 355
F++F EE A+ A+ L G +L V V P FL + E + +M
Sbjct: 157 FVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP-----------FLRKQERDTATDKMRFNN 205
Query: 356 IYCTNIDKKVTQADVKLFF 374
++ N+ + T+ D+ F
Sbjct: 206 VFVKNLSETTTEEDLNKTF 224
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
R V+V ++D+ + +QL+ +F G+V+ C++ D + V + + F++F E A N
Sbjct: 30 RGNVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASGVSKGYGFVQFYSELSVNIACN 89
Query: 315 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
+ GT++ + V P F+ R + + +Y N+ + T D+K+
Sbjct: 90 VRNGTLIRNQHIHVSP-----------FVSRRQWDESRVFTNVYVKNLAETTTDDDLKMI 138
Query: 374 FESVCGEVYRLRLLGDYHHSTRI-AFVEFVMVIASST 409
FE GE+ ++ D +R+ FV F A+ T
Sbjct: 139 FEEF-GEITSAVVMKDKEGKSRMFGFVNFEKAEAAVT 174
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLA 316
+YV ++D V +L LF G ++ C++ PN + + F+EF T EE ++A L +
Sbjct: 225 LYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMN 284
Query: 317 GTMLGFYPVRV 327
G ++G P+ V
Sbjct: 285 GKVVGNKPIYV 295
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
++ ++YV D+D VT+ QL LF GQVV RIC D S L + ++ F++ A
Sbjct: 20 QLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAA 79
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A+++ L F P+ P + + +P+ R+ A I+ N+D+ + D
Sbjct: 80 KAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---DH 125
Query: 371 KLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
K ++ S+ G + ++ D ++ FV+F
Sbjct: 126 KALYDTFSIFGNILSCKIAMDASGLSKGYGFVQF 159
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ ++ L +R E+ ++ TV Y+ ++D VT+E+L+ LF G V C
Sbjct: 276 GKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSC 335
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRVLPSK 331
+I DP + R + F+ F T EE RA + G M+ P+ V P++
Sbjct: 336 KILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQ 382
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ +R++ +++ ++D+ + + L F G ++ C+I D + + + +
Sbjct: 96 RIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYG 155
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--- 355
F++F +EE A++A++ L G +L PV V R +D +
Sbjct: 156 FVQFENEESAQSAIDKLNGMLLNDKPVYV------------GHFQRKQDRDNALSNAKFN 203
Query: 356 -IYCTNIDKKVTQADVKLFF 374
+Y N+ + VT D+K F
Sbjct: 204 NVYVKNLSESVTDDDLKNTF 223
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 152 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 208
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 209 EFSDKESVRTSLALDESLFRGRQIKVVPKRT 239
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 301
SL ++ E+ R++YV ++D T E+L F GCG + I G P FA+I
Sbjct: 88 SLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D + + A+ + ++ P++V+P +T
Sbjct: 145 EFGDRDSVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 153 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 209
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D+E R +L L ++ ++V+P +T
Sbjct: 210 EFSDKESVRTSLALDESLFRGRQIKVVPKRT 240
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTD 305
+E I ++VYV ++D VT E+L + F CG V + C + G P FA+IEF++
Sbjct: 49 KESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG---FAYIEFSE 105
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAI 334
AL L G+ML P++V P +T +
Sbjct: 106 PSLVPNALLLNGSMLHERPLKVTPKRTNV 134
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ + T+E + + F G++ D R S RF +++FT + A++AL
Sbjct: 719 RSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRFKSTRRFCYVQFTSPDSAQSALA 778
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T V PS+ ++ + + R +Y T + K V +AD++ F
Sbjct: 779 LHNT-------EVAPSQKMSVFISDPLRKKARTDVGANDRELYITCLTKFVQEADLRKLF 831
Query: 375 ESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+ G++ +R+ L + HS AFVEF
Sbjct: 832 QPF-GDIKGVRMILNEDGHSKGFAFVEF 858
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
++ ++ E R++YV ++ T E+L F GCG + + C + G P FA+I
Sbjct: 80 TMEEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYI 136
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EFT++E A+L L G++L ++V+P +T
Sbjct: 137 EFTEKESVDASLALDGSILCGRQIKVMPKRT 167
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D++ R ++ L ++ ++V+P +T
Sbjct: 219 EFSDKDSVRTSMALDDSLFRGRQIKVIPKRT 249
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A +++ +++T+ VS++ +T EQL LF CG VV+C I FA+IE++ E
Sbjct: 337 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTIT----DSKHFAYIEYSKPEE 392
Query: 309 ARAALNLAGTMLGFYPVRV-----LPSK 331
A AAL L +G P+ V LP K
Sbjct: 393 ATAALALNNIDVGGRPLNVEMAKSLPPK 420
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
++ ++ E R++YV ++ T E+L F GCG + + C + G P FA+I
Sbjct: 80 TMEEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYI 136
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EFT++E A+L L G++L ++V+P +T
Sbjct: 137 EFTEKESVDASLALDGSILCGRQIKVMPKRT 167
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A +++ +++T+ VS++ +T EQL LF CG VV+C I FA+IE++ E
Sbjct: 331 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAIT----DSKHFAYIEYSKPEE 386
Query: 309 ARAALNLAGTMLGFYPVRV 327
A AAL L +G P+ V
Sbjct: 387 ATAALALNNIDVGGRPLNV 405
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D++ R ++ L ++ ++V+P +T
Sbjct: 246 EFSDKDSVRTSMALDDSLFRGRQIKVIPKRT 276
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 29/202 (14%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 143 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 202
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 203 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 253
Query: 344 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 395
+ + DE + A+ IY +I +T+ D+K FE+ G + ++ G HS +
Sbjct: 254 QAQQVIDEIQEEAKNYNRIYIASIHPDLTEEDIKSVFEAF-GAIATCKMSQGSSAHSHKG 312
Query: 396 IAFVEF------VMVIASSTLF 411
AF+E+ + IAS LF
Sbjct: 313 YAFIEYQTNQSAIEAIASMNLF 334
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 306
A + ++YV D++ VT+ QL LF GQVV R+C D S L + ++ +++
Sbjct: 17 ANNPNFVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNP 76
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 366
+ A AL + L F PV P + + +P+ R+ A I+ N+DK +
Sbjct: 77 QDAARALEV----LNFTPVNGSPIRVMYSHRDPSV-------RKSGAGNIFIKNLDKAID 125
Query: 367 QADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ F SV G + ++ D S FV+F
Sbjct: 126 HKALHDTF-SVFGNILSCKVATDPSGQSKGYGFVQF 160
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ L QR E+ ++ +Y+ ++D + +E++ LF G + C
Sbjct: 277 GKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSC 336
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 327
++ DPN + R + F+ F T EE +RA L + G M+ P+ V
Sbjct: 337 KVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYV 379
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R++YV ++D T E+L A F GCG V + C + G P FA+IEF+D+E R
Sbjct: 6 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 62
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
+L L ++ ++V+P +T
Sbjct: 63 SLALDESLFRGRQIKVIPKRT 83
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
+L ++ + R++Y+ +D T E+L F GCG + + C + G P FA+I
Sbjct: 78 TLEEKVDADNRSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKG---FAYI 134
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EFT++E AA+ L G+M ++V+P +T V+ T
Sbjct: 135 EFTEKESVDAAIALDGSMFRDRQIKVMPKRTNKPGVSST 173
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E+ R+V+V ++D T EQL A F GCG + + C R G P FA++EF
Sbjct: 80 EKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKG---FAYVEFA 136
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
D+E A+A+L + T+ ++VL +T
Sbjct: 137 DKESAQASLAMTDTLFRGRQIKVLEKRT 164
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE +T+YV ++DQ VTE+ L ALF G V C+I + +S +AFIE+ + + A+
Sbjct: 3 EEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYANHQSAQT 61
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D S AFV FV
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFV 145
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + ++ +++ + A AL+L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
S G + ++ D S FV+F
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQF 153
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 90 RIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYG 149
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F +EE A+ A++ L G ++ V V FL + E E +
Sbjct: 150 FVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNN 198
Query: 356 IYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 199 VYVKNLSESTTEEDLKNIF 217
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+++T++V ++ VT EQL +F CG V DCRI + F F+E+ E A A L
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANE----KAFGFVEYATHEQALAGLG 232
Query: 315 LAGTMLGFYPVRVLPSKT 332
L G L P+RV SKT
Sbjct: 233 LNGLALEDRPLRVEMSKT 250
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + ++ +++ + A AL+L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
S G + ++ D S FV+F
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQF 153
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 90 RIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYG 149
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F +EE A+ A++ L G ++ V V FL + E E +
Sbjct: 150 FVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNN 198
Query: 356 IYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 199 VYVKNLSESTTEEDLKNIF 217
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGA-RAALNLA 316
+Y+ ++++ + +E+L LF G + C++ D N V R + F+ F E A RA +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 317 GTMLGFYPVRV 327
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGA-RAALNLA 316
+Y+ ++++ + +E+L LF G + C++ D N V R + F+ F E A RA +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 317 GTMLGFYPVRV 327
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
TV+V ++ T E++ F CG V D R+ PN V FA I+FT EG +AA+ L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
GT +RV ++ A T + P+T+ ++ N+ + +K F
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTNYGPKTD--------KVFVANLSYDTDEDSLKQAF 193
Query: 375 E---SVCGEVYRLRLLGDYHHSTRIAFVEF 401
E ++ GE+ L + D IA+++F
Sbjct: 194 EKFGTIVGEIG-LPISRDTGRIRGIAYIQF 222
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAAL 313
++TV+V ++ +V +E+L LF CG VV R+ D + + F F+ F +GA AL
Sbjct: 341 KQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALAL 400
Query: 314 NLAGTMLGFYPVRVLP-SKTAI 334
+ G + P+RV P SK A+
Sbjct: 401 EMTGREVSGRPIRVSPFSKQAV 422
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D++Q VTE QL LF GQVV R+C D S L + ++ + + A
Sbjct: 25 QFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAA 84
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A+ + L F PV P + + +PT R+ IY N+DK + +
Sbjct: 85 QAIEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGTGNIYIKNLDKAIDNKAL 133
Query: 371 KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 134 HDTF-SAFGSILSCKVATDSLGQSLGYGFVQF 164
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ L R E+ ++ TV YV ++D +T+++L LF G + C
Sbjct: 281 GKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSITDDKLKELFSEFGTITSC 340
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 327
++ DPN V R + F+ F T EE +RA + G M+ P+ V
Sbjct: 341 KVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYV 383
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R + R+ IR++ +Y+ ++D+ + + L F G ++ C++ D L +
Sbjct: 101 RIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQSLGYG 160
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--- 355
F++F +EE A+ A++ L G +L V V P FL + E E + T
Sbjct: 161 FVQFDNEESAKNAIDKLNGMLLNDKQVYVGP-----------FLRKQERESAIDKATFNN 209
Query: 356 IYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 210 VYVKNLSETTTEEDLKKIF 228
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF 303
T + EE + TV+V ++ V EE LAA F CG V RI D + F ++ F
Sbjct: 172 TKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTF 231
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
+ AA+ L GT L +RV S T P + R E + T++ N+
Sbjct: 232 ESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Query: 364 KVTQADVKLFFESVCGEVYRLRLLGD 389
VT+ +++ F S G++ +R D
Sbjct: 291 NVTEDEIRESF-SQYGQLVSVRFPTD 315
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 153 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 209
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D+E R +L L ++ ++V+P +T
Sbjct: 210 EFCDKESVRTSLALDESLFRGRQIKVVPKRT 240
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
VYV I TEE + + F GCG + VDC D A I F E A+ AL L
Sbjct: 183 VYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRALALD 242
Query: 317 GTMLGFYPVRVLPSKTA---IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
G+ +G + +++ P KT A F P+ + IY N+ +T+ D++ F
Sbjct: 243 GSDMGGFFLKIQPYKTTRTFQAKKVSDFAPKIVEGYNR----IYVGNLSWDITEEDLRKF 298
Query: 374 F 374
F
Sbjct: 299 F 299
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R++YV ++D T E+L A F GCG V + C + G P FA+IEF+D+E R
Sbjct: 7 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 63
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
+L L ++ ++V+P +T
Sbjct: 64 SLALDESLFRGRQIKVIPKRT 84
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T + E +++ V +S++ +T E L LF CG+VVDC I + A++E++
Sbjct: 342 TGSVDKAEALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTIT----ETKQTAYVEYSK 397
Query: 306 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIA 335
E A AAL L +G P+ V LP KT +A
Sbjct: 398 PEEATAALALNNMDVGGRPLNVEMAKTLPPKTNLA 432
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 376 --SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
SV G + ++ + ++ FV+F
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQF 174
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 39/193 (20%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R QR+ R+T ++V ++D ++ L ++F G ++ C++ G+ F F
Sbjct: 89 RIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGENGRSKGFGF 148
Query: 301 IEFTDEEGARAALN-LAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRTEDEREMCAR 354
++F ++ A A L TMLG + V +TA AP
Sbjct: 149 VQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCE-------------VFT 195
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF-----------V 402
+Y N+D+ +T+ +K F SV G+V + ++ D+ S FV F V
Sbjct: 196 NLYVKNLDETITEDGLKDMF-SVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDV 254
Query: 403 M---VIASSTLFI 412
M VI S TLF+
Sbjct: 255 MNGSVIGSKTLFV 267
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 251 REEIIRR--TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDE 306
++++++R ++YV D+D +VTE L A F G + R+C L +A++
Sbjct: 9 KQQVLQRGASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSH 68
Query: 307 EGARAALNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
A AL L T L P+R++ + R R+ ++ N+D +
Sbjct: 69 AQASRALGLLNHTNLKGKPMRIM------------WCQRDPFARKTGFANLFVKNLDFSI 116
Query: 366 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ + ++ F S G + ++ G+ S FV+F
Sbjct: 117 SSSCLESIF-SKYGTILSCKVAGENGRSKGFGFVQF 151
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E ++VYV ++D T E++ F GCG V + C R G P FA++EFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKG---FAYVEFT 127
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
++EG + AL + ++L ++V P +T
Sbjct: 128 EKEGMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 29/202 (14%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 156 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 215
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 216 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 266
Query: 344 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 395
+ + DE + A+ IY +I +T+ D+K FE+ G + ++ G H+ +
Sbjct: 267 QAQQVIDEIQEEAKNYNRIYIASIHPDLTEEDIKSVFEAF-GPIVTCKMSQGSAAHTHKG 325
Query: 396 IAFVEF------VMVIASSTLF 411
AF+E+ + IAS LF
Sbjct: 326 YAFIEYQTNQSAIEAIASMNLF 347
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++ + + + + F G ++ CR+ D R +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A A+N ML +V K F+PR+E ER M +
Sbjct: 143 FVHFETEEAANEAINKVNGML-LNEKKVFVGK---------FVPRSERERMMGDKARLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N +++ +K FE V G++ R++ D +R FV F
Sbjct: 193 NVYVKNFGEELDDGKLKEMFE-VYGKITSARVMTDQTGKSRGFGFVSF 239
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D VTE L F G V+ R+C D S L +A++ F A AL+
Sbjct: 12 SLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD- 70
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
+ F P++ P + + +P+ R+ ++ N+ K + D K F+
Sbjct: 71 ---TMNFEPLKNRPMRIMWSQRDPSL-------RKSGVGNVFIKNLHKDI---DNKAIFD 117
Query: 376 --SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
S G + R+ D ++R FV F
Sbjct: 118 TFSAFGNILSCRVATDEQGNSRGYGFVHF 146
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F++F EE ARAA+ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ ++PR + E+E R +Y N ++ ++ ++K F
Sbjct: 190 GILCNSQKVHVV-----------KYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMF 238
Query: 375 ESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
E G + +++ D S R FV F
Sbjct: 239 EPY-GRITSHKIMTDEEGRSKRFGFVAF 265
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R+V+V ++D E+L A F GCG + + C R G P FA+IEF D+E ARA
Sbjct: 64 RSVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKG---FAYIEFADKESARA 120
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
+L + T+ ++V+ +T
Sbjct: 121 SLAMTDTLFRGRQIKVVEKRT 141
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 47/187 (25%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN--- 314
TV+V+D+ +QVTE++L +LF CG + + +I PN+V+ A +EF + + AAL
Sbjct: 669 TVFVADLPEQVTEDELKSLFKDCGSIREVKITKLPNAVV--ALVEFFERDSVPAALTKDK 726
Query: 315 --LAGTMLGF---YPVRVLPSK---------------------------TAIAPVNPTFL 342
L G + + + VR PSK + P P +
Sbjct: 727 KRLQGQEISYGMLFDVR-WPSKKFKTTRRFCYVQFTSPDAAQQALELHRKELEPNLPLNV 785
Query: 343 ----PRTEDER---EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HST 394
P + ER + R +Y + K T+AD++ F + G+V +R+ + H+
Sbjct: 786 YISNPERKKERTDHDANEREVYVAGLSKFTTKADLEKLF-ATYGKVKDVRMATEQDGHAR 844
Query: 395 RIAFVEF 401
AFVE+
Sbjct: 845 GYAFVEY 851
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
R VYV+ + + T+ L LF G+V D R+ + + R +AF+E+ + + AR AL+
Sbjct: 804 REVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQDGHARGYAFVEYEEPQDARRALDA 863
Query: 316 AGTMLGFYPVRVL---PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L + V P A + T L R E+ +R+I N+ + ++
Sbjct: 864 NNYELKKRRIAVTLADPRVRARHNKSETGLGRNA---EIRSRSIRVRNLPPNTQEGLLQQ 920
Query: 373 FFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHN 421
FE V V R+ + D R A VE + L + TE + ++
Sbjct: 921 TFEKVAA-VRRVEVFAD----KREAAVELETAAEAGKLLLRTEPLVFND 964
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 376 --SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
SV G + ++ + ++ FV+F
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQF 174
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
IRRTV ++++D+ + + + LF G+V R C P +A +EFTD+ AAL
Sbjct: 151 IRRTVVITNLDRSIGSQNVIELFSKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALK 210
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNP 339
+ G L ++V S AI P
Sbjct: 211 MNGMQLAGNTIKVYHSIQAIVKPQP 235
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA++
Sbjct: 33 SIEERMETDARSIYVGNVDYGATAEELEAHFHGCGSVNYVTILCDKFSGHPKG---FAYM 89
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLP 329
+F+D+E R +L L ++ ++V+P
Sbjct: 90 KFSDKESVRTSLALDESLFRGRQIKVIP 117
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +E+L LF G + C++ DPN V R + F+ F T EE +RA L +
Sbjct: 318 LYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMN 377
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 378 GKMVASKPLYV 388
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D+D VT+ QL LF GQVV R+C D + L + ++ +++ + A A
Sbjct: 32 VTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 91
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 92 LDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDKAIDHKALHD 140
Query: 373 FFESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 141 TFSSF-GNILSCKVAVDGSGQSKGYGFVQF 169
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V + + F CG+VVD R+ D + + F +EF E A++AL L
Sbjct: 355 KTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEL 414
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRT---EDEREMCARTIYCTNIDKKVTQADVKL 372
G L VR+ +A F P + ++ ++T++ DK + + +++
Sbjct: 415 NGQELLQRGVRL-----DLARERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRA 469
Query: 373 FFE---SVCGEVYRLRLLGDYH--HSTRIAFVEF 401
E + CG+ R+ + DY +S A+++F
Sbjct: 470 KLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDF 503
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE +T+YV ++D VTEE L LF G V C+I + S+ FAFIE+ + + A+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRE-TSIDPFAFIEYANHQSAQT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEI---IRRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+ F + + R+N TS + + ++V D+ ++ E L F G++
Sbjct: 64 AAMNKRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEIS 123
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAALNLA-GTMLGFYPVRV 327
+CRI DP ++ +AF+ F + A A+ + G LG +R
Sbjct: 124 NCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRT 169
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D N+ L +A++ ++ A AL
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE- 99
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 100 ---MLNFTPINGKPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 146
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D ++ FV++
Sbjct: 147 TFCVFGNILSCKVATDASGESKGYGFVQY 175
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D V +++L LF G + C++ D N V R + F+ F + E+ +RA +
Sbjct: 324 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 383
Query: 317 GTMLGFYPVRV 327
M+G P+ V
Sbjct: 384 SKMVGSKPLYV 394
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF 303
T ++ + ++YV D+D V+E +L +F GQVV R+C D L +A++ +
Sbjct: 15 TPISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNY 74
Query: 304 TDEEGARAALNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID 362
+ A AL L T++ P+R++ S R R+ A I+ N++
Sbjct: 75 GTHQDASQALELLNFTLVKGKPIRIMYSH------------RDPSIRKSGAANIFIKNLE 122
Query: 363 KKVTQADVKLFFESVCGEVYRLR-LLGDYHHSTRIAFVEF 401
K + + F S G + R ++ D +S FV+F
Sbjct: 123 KSIDNKALHDTF-SAFGTILSCRVVMDDAGNSKGYGFVQF 161
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 214 NNHNARNGNVNANAAVRRKKSF--GQGKRRMNSRTSLAQREEIIRR---------TVYVS 262
N +A N N N + +K + G+ +++ L + E +R+ +Y+
Sbjct: 253 NVDDAANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLK 312
Query: 263 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGARAALN-LAGTML 320
+ID + +E+L LF G V C++ P + F+ F+ E A A+N + G M+
Sbjct: 313 NIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMV 372
Query: 321 GFYPVRV 327
G P+ V
Sbjct: 373 GSKPLYV 379
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEII---RRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+SF + + ++N TS + ++ ++V D+ ++ + L F G++
Sbjct: 136 AAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEIS 195
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTF 341
+CRI DP ++ +AF+ F + A AA+N + G LG +R S P
Sbjct: 196 NCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSER 255
Query: 342 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ + + +YC +T +K F S G + +R+ D + AF++F
Sbjct: 256 PRHSNNSKPNYEEVLYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKDKGY----AFIKF 310
Query: 402 VMVIASS 408
A++
Sbjct: 311 TTKEAAT 317
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 133
Query: 312 AL 313
AL
Sbjct: 134 AL 135
>gi|406606068|emb|CCH42541.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 787
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF-TDEEGARAALN 314
T+YV D+DQ+VTE+ L++LF + ++C P + L + ++ F +D + RA +
Sbjct: 136 TLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATED 195
Query: 315 LAGTMLGFYPVRVLP 329
L T++ +R++P
Sbjct: 196 LNYTLVANKEIRIMP 210
>gi|1279563|emb|CAA61298.1| nuM1 [Medicago sativa]
Length = 635
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 238 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 297
GK+ N T E +T++V ++ V + F GC +VVD R+ D + V +
Sbjct: 359 GKKAPN--TPATPNETSGSKTLFVGNLSFDVKRSDIENFFQGCVEVVDVRLASDGDGVFK 416
Query: 298 -FAFIEFTDEEGARAALNLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCAR 354
F +EF E A++AL + G L +R + + A P N + R +
Sbjct: 417 GFGHVEFATAEAAQSALEMNGQELLHRALRLDLARERGAFTPNNNSNYSAQSGGRGQS-Q 475
Query: 355 TIYCTNIDKKVTQADVKL----FFESVCGEVYRLRLLGDYH--HSTRIAFVEF 401
T++ DK + + +++ F CGE R+ + DY +S A+++F
Sbjct: 476 TVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDYESGYSKGFAYMDF 528
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D VT+ QL LF QVV R+C D + L + ++ +TD E A AL++
Sbjct: 170 SLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDV 229
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
L F P+ P + + +P+ R+ I+ N+DK +
Sbjct: 230 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKGI 268
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F+ EE +RA +
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512
Query: 317 GTMLGFYPVRV 327
M+ P+ V
Sbjct: 513 SKMVVSKPLYV 523
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + ++ F++ + A
Sbjct: 27 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 86
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL++ L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 87 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 135
Query: 371 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 136 HDTF-STFGNILSCKVATDSSGQSKGYGFVQF 166
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +E+L LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 315 LYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMN 374
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 375 GKMVVSKPLYV 385
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
RT+YV ++D VTEE L ALF G V C++ +P S +AF+EF GA AL
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSD-PYAFLEFDTHSGAATAL 63
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ L F G++ +CRI DP ++ +AF+ F + A A+N +
Sbjct: 98 IFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSM 157
Query: 316 AGTMLGFYPVRV-LPSKTAIAPVNP--------TFLPRTEDEREMCARTIYCTNIDKKVT 366
G LG +R ++ P P ++ T+YC I + +T
Sbjct: 158 NGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLT 217
Query: 367 QADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASST 409
+ V+ F S G + +R D + AF++F A++T
Sbjct: 218 EELVEQVF-SRFGTIVEIRAFRDKGY----AFIKFSTKEAATT 255
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME- 101
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F PV P + + +P+ R+ A I+ N+DK + D K F+
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALFD 148
Query: 376 S 376
+
Sbjct: 149 T 149
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 225 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESV 284
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------I 356
AAL L G L P+ V P TE E+ ART +
Sbjct: 285 AAALQLTGQKLLGIPIIVQP---------------TEAEKNRQARTTSGHHPNSVPFHRL 329
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
Y NI +T+ D++ FE GE+ ++L D + +R FV+F
Sbjct: 330 YVGNIHFSITETDLQHVFEPF-GELEFVQLQKDENGRSRGYGFVQF 374
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + ++ F++ + A
Sbjct: 24 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 83
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL++ L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 84 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 132
Query: 371 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 133 HDTF-STFGNILSCKVATDSSGQSKGYGFVQF 163
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +++L LF G + C++ DPN + R + F+ F T +E +RA L +
Sbjct: 312 LYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMN 371
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 372 GKMVVSKPLYV 382
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 29/202 (14%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 130 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 189
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 190 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 240
Query: 344 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 395
+ + DE + A++ IY +I +T+ D+K FE+ G + ++ G+ H+ +
Sbjct: 241 QAQQVIDEIQEEAKSYNRIYIASIHPDLTEEDIKSVFEAF-GPIMTCKMSQGNAVHTHKG 299
Query: 396 IAFVEF------VMVIASSTLF 411
F+E+ + IAS LF
Sbjct: 300 YGFIEYQTNQSAIEAIASMNLF 321
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAALNL 315
TV+V ++ +V +E+L F CG V R+ D + + F F+ F + +GA AL +
Sbjct: 338 TVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEM 397
Query: 316 AGTMLGFYPVRVLP-SKTAIA 335
AG L PVRV SK A A
Sbjct: 398 AGRELCGRPVRVTEFSKQAAA 418
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Query: 257 RTVYVSDID-QQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-----FAFIEFTDEEGAR 310
R VYVSD+D +V E++L+ +F G + RI + + FAFI F A
Sbjct: 116 RQVYVSDLDFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAV 175
Query: 311 AALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
+L L G +L P+++ P K ++ + R ARTI N+D K+
Sbjct: 176 KSLELDGKLLAGRPMKIELATPKKKKVSVLGTGKFDR--------ARTISVLNVDDKINT 227
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIAS 407
+K FE + G V ++ L A +EF V +S
Sbjct: 228 ETLKAIFEEI-GPVTQIEL----QPENNAALIEFETVRSS 262
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+EE L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEII---RRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+SF + ++N TS + ++ ++V D+ ++ + L F G++
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEIS 123
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRV 327
+CRI DP ++ +AF+ F + A AA+ + G LG +R
Sbjct: 124 NCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRT 169
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFT 304
+R + RR++YV ++D T ++L F CG V R G P FA+IEF+
Sbjct: 30 ERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFS 86
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
D E R A+ L T+ ++V P +T I + T
Sbjct: 87 DRESVRTAMALDETLFRGRVIKVSPKRTNIPGFSTT 122
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 227 AAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDC 286
+A+RRK+ F + +++ I R +YV +I + T E+LA +F CG V
Sbjct: 43 SALRRKRVFSTKAQVQVQEAVQGGKQKEIERRLYVGNIPRTSTNEELAKIFGECGNVEKA 102
Query: 287 RICGDPNS--VLRFAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ D + RFAF+ + E A+AA+ + GT +G RV+ P++ + L
Sbjct: 103 EVMYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGG---RVIKVNITEKPLDVSGLN 159
Query: 344 RTEDEREMC--ARTIYCTNIDKKVTQADVKLFF 374
R +E E +Y N+ K VT +K F
Sbjct: 160 RLTEEAEFIDSPYKVYVGNLAKAVTTETLKKKF 192
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV------VDCRICGDPNSVLRFAFIEFT 304
REE+ +R+VY+ +D T E+L F CGQ+ VD + G P FA++EF
Sbjct: 55 REEVDKRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVD-KYSGHPKG---FAYVEFA 110
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
DE+ + +L L G++ ++V+ +T + P FL
Sbjct: 111 DEQSVQNSLLLNGSLFRGRQLKVMQKRTNV----PGFL 144
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 289 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 344
Query: 306 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 338
+E A AAL L +G P+ V LP KT +A N
Sbjct: 345 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 382
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 347 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 402
Query: 306 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIA 335
+E A AAL L +G P+ V LP KT +A
Sbjct: 403 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLA 437
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+EE L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEII---RRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+SF + ++N TS + ++ ++V D+ ++ + L F G++
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEIS 123
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRV 327
+CRI DP ++ +AF+ F + A AA+ + G LG +R
Sbjct: 124 NCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRT 169
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 359 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 414
Query: 306 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIA 335
+E A AAL L +G P+ V LP KT +A
Sbjct: 415 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLA 449
>gi|401424247|ref|XP_003876609.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492852|emb|CBZ28130.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 309
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPV 337
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E+ R++YV ++D T E+L F GCG + + C R G P FA+I
Sbjct: 90 SIEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
EF D + + A+ + ++ ++V+P +T ++ T P
Sbjct: 147 EFGDRDSVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTNRP 188
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 302
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 73 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 132
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
F ++EG + ALNL + L ++V P +T +
Sbjct: 133 FLEQEGVQEALNLNESELHGRQIKVAPKRTNV 164
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-N 314
R +Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+
Sbjct: 113 RKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEK 172
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKL 372
+ G + V V+ F+PR + E+E + +Y N+ ++ T+ ++
Sbjct: 173 VNGMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLGEEFTEQHLRE 221
Query: 373 FFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
FE +L D S R FV +
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAY 250
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++DQ VTE+ L ALF G V C+I + +S +AFIE+ + A+
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYASHQSAQT 61
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D S AFV FV
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFV 145
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 81 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 137
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 138 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 183
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
S G + ++ D S FV++
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQY 174
>gi|402218951|gb|EJT99026.1| hypothetical protein DACRYDRAFT_24111 [Dacryopinax sp. DJM-731 SS1]
Length = 1056
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 207 ANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSD 263
AN++L N+ N R +VN + R+K+ G + R VYV+
Sbjct: 768 ANDALSLNDQELENDRRISVNISDPTRKKQRTDAGADK---------------REVYVAG 812
Query: 264 IDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGT 318
+ + V +E+L LF G V + R+ P+ + + F F+EF DE GA AAL+L T
Sbjct: 813 LARGVKKEELEKLFGEKGSVKEVRLALGPDGLCKGFGFVEFQDEVGAEAALSLNNT 868
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T++V +I VT+E LA F G+VV RI N FA +EF+ E A+ ALN +
Sbjct: 345 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 404
Query: 317 GTMLG---FYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK- 371
G +G Y P T A P P R+ T++ DK + ++
Sbjct: 405 GQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGNTVFVKGFDKYQEEDSIRE 464
Query: 372 ---LFFESVCGEVYRLRLLGDYHHS--TRIAFVEF 401
F+S CG + R+++ D A++EF
Sbjct: 465 SLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEF 498
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
S G + ++ D S FV++
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQY 174
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + ++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 323 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMN 382
Query: 317 GTMLGFYP----------------------VRVLPSKTAIAPVNPTFLP 343
G M+ P VR +P ++AP P + P
Sbjct: 383 GKMISGKPLYVAFAQRKEDRKVMLQAQFSQVRPVPMTPSMAPRLPMYPP 431
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ + +E + + F G + D R S RF +I+FT A AAL
Sbjct: 320 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 379
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L + + V P + ++ +T + + +Y T + K V + D++ F
Sbjct: 380 L-------HNLEVSPKQKMSVLISDPTRKQTRSDNHANEKELYITCLSKYVQEDDLRKLF 432
Query: 375 ESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
S GE+ +R++ D HS AFVEF
Sbjct: 433 -SQFGEIKGVRVVLDQAGHSKGFAFVEF 459
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+ +Y++ + + V E+ L LF G++ R+ D + FAF+EF +E A+AAL++
Sbjct: 412 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 471
Query: 316 AGTMLGFYPVRVLPSKT---AIAPVNPTFLPRTE-----DEREMCARTIYCTNIDKKVTQ 367
L + V S ++A N TF T+ D R +R++ +NI + +
Sbjct: 472 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 528
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
A ++ FE G+V + + + A VEF + + +F+H E ++++ +
Sbjct: 529 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDAGRVFLHKEPIVINDQKV 580
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
S G + ++ D S FV++
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQY 174
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + ++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 323 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMN 382
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
G M+ P+ V F R ED + M
Sbjct: 383 GKMISGKPLYV------------AFAQRKEDRKAM 405
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
RT+YV ++D VTEE L A+F GQV C+I +P + + F+EF+D + A +AL
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASAL 68
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 207 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEI---IRRTVYVSD 263
N+ F + +A A+ ++ FG+ + ++N TS ++ ++V D
Sbjct: 49 GNDPYCFVEFSDHQSAASALLAMNKRLCFGK-EMKVNWATSPGNTPKLDTSKHHHIFVGD 107
Query: 264 IDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTML 320
+ ++ QL F G + DCR+ DP ++ + F+ F + A A+ + G L
Sbjct: 108 LSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWL 167
Query: 321 GF------YPVRVLPSKTAIAPVNPT--FLPRTEDE----REMCARTIYCTNIDKKVTQA 368
G + R P+ A V+ T P T DE T+YC I + +++
Sbjct: 168 GSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEE 227
Query: 369 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHT 414
++ F S G + +R+ D + AF+ F A++ + T
Sbjct: 228 LMQKTFSSY-GAIQEIRVFKDKGY----AFIRFGTKEAATHAIVAT 268
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQSAAT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEII---RRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+SF + ++N TS + ++ ++V D+ ++ + L F G++
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEIS 123
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFYPVRV 327
+CRI DP ++ +AF+ F + A AA+N + G LG +R
Sbjct: 124 NCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRT 169
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D+D VT+ QL +F GQVV R+C D + L + ++ +++ + A A
Sbjct: 27 VTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 86
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L++ L F P+ P + + +P+ R+ A I+ N+DK + +
Sbjct: 87 LDV----LNFTPLNGKPIRVMYSHRDPSI-------RKSGAGNIFIKNLDKAIDHKALHD 135
Query: 373 FFESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
F S G + ++ L S FV+F
Sbjct: 136 TF-SAFGSILSCKVALDSSGQSKGYGFVQF 164
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T +E +RA + +
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372
Query: 317 GTMLGFYP----------------------VRVLPSKTAIAPVNPTFLP 343
G M+ P +R +P ++AP P + P
Sbjct: 373 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 421
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ + +E + + F G + D R S RF +I+FT A AAL
Sbjct: 732 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 791
Query: 315 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
L + + V P K ++ +PT +T + + +Y T + K V + D++
Sbjct: 792 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 843
Query: 374 FESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S GE+ +R++ D HS AFVEF
Sbjct: 844 F-SQFGEIKGVRVVLDQAGHSKGFAFVEF 871
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+ +Y++ + + V E+ L LF G++ R+ D + FAF+EF +E A+AAL++
Sbjct: 824 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 883
Query: 316 AGTMLGFYPVRVLPSKT---AIAPVNPTFLPRTE-----DEREMCARTIYCTNIDKKVTQ 367
L + V S ++A N TF T+ D R +R++ +NI + +
Sbjct: 884 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 940
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
A ++ FE G+V + + + A VEF + + +F+H E ++++ +
Sbjct: 941 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDAGRVFLHKEPIVINDQKV 992
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
EI RR+VYV +ID T L + CG++ I + FA++EF D EGA+
Sbjct: 78 EIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEGAK 137
Query: 311 AALNLAGTMLGFYPVRVLPSKTAI 334
AA+ L GT L + + +T I
Sbjct: 138 AAIELNGTELYSRALTIQQKRTNI 161
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 348 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH----STRIAFVEF 401
+RE+ R++Y NID T AD+K + CGE+ R+ +L Y+H S A+VEF
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDD-CGEINRITIL--YNHYTGRSKGFAYVEF 130
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 73 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 129
Query: 302 EFTDEEGARAALNL 315
EF+D+E R +L L
Sbjct: 130 EFSDKESVRTSLAL 143
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 309
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPV 337
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
R E R+VYV ++D T E+L F GCG V + C + G P FA+IEF+
Sbjct: 4 DRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 60
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
D+E + A+ L ++ ++V P +T
Sbjct: 61 DKESVKTAMALDDSLFRGRQIKVSPKRT 88
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV D+D VT+ QL F GQVV R+C D + L + ++ FT ++ ARA
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQE 100
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L L PVRV+ S R R A I+ N+DK + + F
Sbjct: 101 LNYIPLNGKPVRVMYSH------------RDPSVRRSGAGNIFIKNLDKSIDHKALHDTF 148
Query: 375 ESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
SV G + ++ D S FV++
Sbjct: 149 -SVFGNIISCKVAVDSSGQSKGYGFVQY 175
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D V++E+L LF G V C++ DPN + R + F+ F T EE +A ++
Sbjct: 324 LYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMS 383
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 384 GKMIENKPLYV 394
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
++ S +++EI +R++YV ++D T E+L F GCG V + C + G P
Sbjct: 54 TTQLSEQEKKEIDQRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKG--- 110
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
FA+IEF D++ A+ + ++ ++VL +T + ++ T
Sbjct: 111 FAYIEFADKDSVETAMAMDDSLFRGRQIKVLQKRTNMPGISTT 153
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T++V +I VT+E LA F G+VV RI N FA +EF+ E A+ ALN +
Sbjct: 316 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 375
Query: 317 GTMLG---FYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK- 371
G +G Y P T A P P R+ T++ DK + ++
Sbjct: 376 GQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGNTVFVKGFDKYQEEDSIRD 435
Query: 372 ---LFFESVCGEVYRLRLLGDYHHS--TRIAFVEF 401
F+S CG + R+++ D A++EF
Sbjct: 436 SLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEF 469
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEE 307
E+ +R+VYV ++D T E+L + F CGQV + C + G P +A+IEF ++
Sbjct: 42 EVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKG---YAYIEFEEKS 98
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
+AA+ L ++ ++VLP +T + ++ T
Sbjct: 99 SVKAAVELDESVFRGRVIKVLPKRTNMPGISST 131
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE- 101
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
ML F PV P + + +P+ R+ A I+ N+DK +
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI 141
>gi|365986410|ref|XP_003670037.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
gi|343768806|emb|CCD24794.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
Length = 626
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 211 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII--RRTVYVSDIDQQV 268
L+ N+ ++ N NA+ ++ Q + NS S + E I +++++V + Q+
Sbjct: 229 LLSKNNEGQDSNSNASPSISSTIVDTQNDYKNNSNLSQGEEEMITIDKKSIFVGQLPQET 288
Query: 269 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 313
T+E L F G+++D + P +V FAFI++ E+ A AAL
Sbjct: 289 TKEDLETHFWKHGKILDLNLIHKPTNV--FAFIQYESEKSAAAAL 331
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 315 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 374 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMVIASST 409
F GE+ ++ D S R FV F A+ T
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVT 174
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 236 GQGKRRMNSRTSLAQR---EEIIR-------RTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
G+ +R+ N L + E+IIR +YV ++D V +L LF G +
Sbjct: 192 GRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITS 251
Query: 286 CRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTMLGFYPVRV 327
C++ N + + F+EF T EE ++A L + G M+G P+ V
Sbjct: 252 CKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYV 295
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----- 283
V ++ + G S S+ + E R+VYV ++D T E+L A F GCG V
Sbjct: 63 VEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTI 122
Query: 284 VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ + G P FA+IEF D+E + AL L ++ ++V +T V+ T P
Sbjct: 123 LTDKFTGHPKG---FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRP 179
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 233 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 292
K G + NS S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 63 KEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 122
Query: 293 NSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 123 FGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D+D VT+ QL LF GQVV R+C D S L + ++ +++ A A
Sbjct: 27 VTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRA 86
Query: 313 LNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L++ T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLDKAIDHKALH 134
Query: 372 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 135 DTF-SAFGSILSCKVATDSSGQSKGFGFVQF 164
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 316
+YV ++D + +++L LF G G + C++ DPN + R + F+ F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 233 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 292
K G + NS S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 63 KEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 122
Query: 293 NSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 123 FGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
+ + +VYV D++ V+E QL +F G VV R+C D L +A++ + + A
Sbjct: 20 QFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDAT 79
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL L L F PV P + + +P+ R+ A I+ N+DK + +
Sbjct: 80 RALEL----LNFTPVNGKPIRIMFSHRDPSL-------RKSGAANIFIKNLDKAIDNKAL 128
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
F S G + ++ D ++ FV+F
Sbjct: 129 HDTF-SAFGGILSCKVATDSSGQSKGYGFVQF 159
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D V +E+L LF G + C++ DP R + F+ F T EE RA +
Sbjct: 308 LYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMN 367
Query: 317 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 343
M+G P+ V + +T + P PT LP
Sbjct: 368 TKMVGSKPLYVALAQRKEERRVRLQAAFAQMRTPVGPTVPTSLP 411
>gi|146090675|ref|XP_001466305.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017412|ref|XP_003861893.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070667|emb|CAM69016.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500121|emb|CBZ35196.1| hypothetical protein, conserved [Leishmania donovani]
Length = 495
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 309
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAI 334
+ A+ + G L + +RV ++ A+
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAV 455
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NL 315
TVYV + Q E++L F G + R+ +PN L+ F +I+F ++ + A+ +L
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKSK------------KEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEFV 402
GEV R+ L D HS F+EF+
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFL 871
>gi|340055809|emb|CCC50130.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 657
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 306
A + +++ RTV++ + + + + +LAAL CG+ + RICG+ S + F+EF D+
Sbjct: 96 AVKTDLLARTVHLRFLPKGMLQSELAALCAECGEYLRVRICGNATSTQNWIYGFVEFADK 155
Query: 307 EGARAALNLAGTML----GFYPVRVL 328
+GA A + +G L G P+R++
Sbjct: 156 QGAAAMMRRSGMELSNGPGKPPLRLM 181
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D+D VT+ QL LF GQVV R+C D S L + ++ +++ A A
Sbjct: 27 VTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRA 86
Query: 313 LNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L++ T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLDKAIDHKALH 134
Query: 372 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 135 DTF-SAFGSILSCKVATDSSGQSKGFGFVQF 164
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 316
+YV ++D + +++L LF G G + C++ DPN + R + F+ F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFTDEEGAR 310
RR++YV ++D T ++L F CG V R G P FA+IEF+D E R
Sbjct: 65 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 121
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ L T+ ++V P +T I + T
Sbjct: 122 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 151
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NL 315
TVYV + Q E++L F G + R+ +PN L+ F +I+F ++ + A+ +L
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKSK------------KEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEFV 402
GEV R+ L D HS F+EF+
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFL 871
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R++YV ++D T ++L F GCG V + C R G P FA+IEF+D + ++
Sbjct: 60 RSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVQS 116
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ L T+ ++V+P +T + ++ T
Sbjct: 117 AIGLHETLFRGRVLKVMPKRTNMPGISTT 145
>gi|303286577|ref|XP_003062578.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456095|gb|EEH53397.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 235
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 247 SLAQREEIIRRTVYVSDI----DQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIE 302
S A +E I RTV+V I + ++TE +A F G VV R+ R A++E
Sbjct: 2 SRASDQEKISRTVHVGGIRGLDNGEITERDVAEFFSQQGPVVAVRVH------ARSAWVE 55
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 356
F D+ AALNL G G + +RV SKTAI L RT + AR +
Sbjct: 56 FADDASTMAALNLDGVTTGGHNLRVNRSKTAIN--TNALLERTREASIAAARAV 107
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 92 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 148
Query: 302 EFTDEEGARAALNL 315
EF+D+E R A+ L
Sbjct: 149 EFSDKESVRTAMAL 162
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKREVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 314
+TV+V + V + LA F CG+VV R+ D N+ F F+EF EGA AA+
Sbjct: 321 KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGANAAVA 380
Query: 315 LAGTM-LGFYPVRVLPSKTAIAPVNPTFLPRT-EDEREMCARTIYCTNIDKKVTQADV-K 371
L G + V + KT+ P +P + D + ++ N+ +T+ + +
Sbjct: 381 LNGQKEIDGRAVNL--DKTSAKPADPERRAKAFGDSTSAPSSVLFVGNVSFDMTEDGLWE 438
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMVIASSTLF 411
+F E GEV +RL D + R+ +VEFV V ++ F
Sbjct: 439 VFAE--YGEVKSVRLPTD-RDTQRLKGYGYVEFVDVESAKKAF 478
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEG 308
EE+ R +YV +I + VT ++L+A+F G VV + D S RF F+ T EE
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 309 ARAALNLAGTMLGFYPVRV------LPSKTAIAPVN-PTFLPRTEDEREMCARTIYCTNI 361
A A +L T +G ++V LP+ A AP + P+F+ D + +Y N+
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFV----DSQ----YKVYVGNL 175
Query: 362 DKKVTQADVKLFFESVCGEV 381
KKVT +K FF S GEV
Sbjct: 176 AKKVTTEVLKNFF-SEKGEV 194
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 168 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 216
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV F
Sbjct: 217 EPYGRITSHKLMLDEEGRSRRFGFVAF 243
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R+VYV ++D T ++L F GCG V + C R G P FA+IEF+D + +
Sbjct: 82 RSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVNS 138
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ L T+ ++VLP +T + ++ T
Sbjct: 139 AIGLHETLFRGRVLKVLPKRTNLPGISTT 167
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 302 EFTDEEGARAALNL 315
EF+D+E R +L L
Sbjct: 188 EFSDKESVRTSLAL 201
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D VT+ QL +F GQVV R+C D + L + ++ +T + A AL++
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P P + + +P+ R+ I+ N+DK + + F
Sbjct: 98 ----LNFTPFNNKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKTIDHKALHDTFS 146
Query: 376 SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
S G + ++ D +R FV+F
Sbjct: 147 SF-GNILSCKVATDSSGQSRGYGFVQF 172
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +++E L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 320 LYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 379
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 380 GKMVVSKPLYV 390
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C++ D + R +
Sbjct: 109 RIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGYG 168
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TI 356
F++F +EE A+ A++ L G +L V V FL + E + + +
Sbjct: 169 FVQFDNEEAAQNAIDKLNGMLLNDKQVYVG-----------HFLRKHERDSASNKKFNNV 217
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
Y N+ + T+ D+K F GE+ ++ D ++ FV F
Sbjct: 218 YVKNLSESTTEEDLKNIFGEY-GEITSAVIMRDADGKSKCFGFVNF 262
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
++ EE +T+YV ++D VTE+ L LF G V C+I +PN+ +AF+EF + +
Sbjct: 1 MSNSEENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNN-DPYAFVEFVNHQ 59
Query: 308 GARAAL 313
A AL
Sbjct: 60 AASTAL 65
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ L F G++ +CRI DP ++ +AF+ F + A +A++ +
Sbjct: 100 IFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAM 159
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 356
G LG +R S P PRTE R+ A+ +
Sbjct: 160 NGQWLGNRSIRTNWSTRKPPP------PRTERSRQGNAKAV 194
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 35/188 (18%)
Query: 238 GKRRMNSRTSLAQREEII------RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 291
G R NSR + E I +RT++V I Q+ L A F G VV+ +I D
Sbjct: 153 GDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 212
Query: 292 --PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV-----------RVLPSKTAIAP-V 337
++EF DEE AL L G L P+ PS+ AP
Sbjct: 213 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGA 272
Query: 338 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-- 395
N R +Y NI VT+ D++ FE GE+ ++ L D + R
Sbjct: 273 NGAPFHR-----------LYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSK 320
Query: 396 -IAFVEFV 402
FV+FV
Sbjct: 321 GYGFVQFV 328
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-L 315
RT+YV ++D VTE+ + ALF GQ+ C+I +P S + F+EF + A +A+ +
Sbjct: 13 RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSD-PYCFVEFVNHSDASSAITAM 71
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
M +RV + +AI P P T I+ ++ ++ +D++ F
Sbjct: 72 NARMCLGRELRVNWASSAIQQQTP-HRPDTSKHHH-----IFVGDLSPQIETSDLREAF- 124
Query: 376 SVCGEVYRLRLLGD--YHHSTRIAFVEFV 402
S GE+ R++ D S FV F
Sbjct: 125 SPFGEISDCRVVKDATTQKSKGYGFVSFT 153
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 238 GKRRMNSRTSL---AQREEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
GK + S L Q E+I + TV Y+ ++D V +E+L LF G + C
Sbjct: 276 GKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSC 335
Query: 287 RICGDPNSVLRFA-FIEFTDEEGARAALN-LAGTMLGFYPVRV 327
++ DPN + R + F+ F+ EGA AL + G M+ P+ V
Sbjct: 336 KVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYV 378
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 302 EFTDEEGARAALNL 315
EF+D+E R +L L
Sbjct: 188 EFSDKESVRTSLAL 201
>gi|302914164|ref|XP_003051083.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
gi|256732021|gb|EEU45370.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
Length = 1061
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
+A +R K FGQ + + S L TVYV++ E + LF CG+++
Sbjct: 655 SALLRDGKYFGQSQLTVKSGLDL---------TVYVANFPPVADEAYIRNLFKDCGEILS 705
Query: 286 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLP 343
R NS RF +I F D E + A+N G +L G Y + S P
Sbjct: 706 VRWPSLKVNSHRRFCYISFRDREASANAVNKEGKVLEGRYKLLAKYSD-----------P 754
Query: 344 RTEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 399
+ RE R ++ +N+D+ ++AD+K F S G+V R+++ + AF+
Sbjct: 755 NHKKAREGALSEGREVHISNLDRTASEADLKGVF-SKYGKVTRVKVPQTLSGKNKGFAFI 813
Query: 400 EF 401
+F
Sbjct: 814 DF 815
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALN 314
++YV D++ V++ QL LF GQVV R+C D S L +A++ F++ + ARA
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L +L P+RV+ S R R + I+ N+DK + + F
Sbjct: 107 LNFAVLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 154
Query: 375 ESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
S G + ++ + + S FV++
Sbjct: 155 SSF-GTILSCKVAMDEAGQSKGFGFVQY 181
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNLA 316
+YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 101
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
ML F PV P + + +P+ R+ A I+ N+DK +
Sbjct: 102 --MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI 141
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 55/251 (21%)
Query: 215 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
+H A N NV+ GQ +N+ S A + ++YV D+ Q VTE L
Sbjct: 45 DHTAGNANVSGGGVSGTAPPAGQRPNGLNAAASAA---NFVSPSLYVGDLHQDVTEAMLF 101
Query: 275 ALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSK 331
+F G V R+C D + L +A++ + + A +L+ L T++ P R++
Sbjct: 102 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 158
Query: 332 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGD 389
+ R R+ I+ N+DK + D K ++ S+ G + ++ D
Sbjct: 159 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 206
Query: 390 YH-HSTRIAFVEFV--------------MVIASSTLFI----------------HTEFYI 418
+ HS FV + M+I T+++ +T YI
Sbjct: 207 ENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAERDNLAETKYTNVYI 266
Query: 419 LHNPSIAWLEE 429
+ PS AW +E
Sbjct: 267 KNMPS-AWEDE 276
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNL 315
EF+D+E R +L L
Sbjct: 246 EFSDKESVRTSLAL 259
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----- 283
V ++ + G S S+ + E R+VYV ++D T E+L A F GCG V
Sbjct: 63 VEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTI 122
Query: 284 VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ + G P FA+IEF D+E + AL L ++ ++V +T V+ T P
Sbjct: 123 LTDKFTGHPKG---FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRP 179
>gi|255554000|ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical protein [Ricinus communis]
Length = 946
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A +E+ +++T+ VS++ +T +QL LF G VV+C I + FA+IE++ E
Sbjct: 342 AGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGSVVECSITDSKH----FAYIEYSKPEE 397
Query: 309 ARAALNLAGTMLGFYPVRV-----LPSKTAI-APVNPTFLP 343
A AAL L +G P+ V LP K+ + + V + LP
Sbjct: 398 ATAALALNNMDVGGRPLNVEMAKSLPQKSLLNSSVASSSLP 438
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 315 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 374 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMVIASST 409
F GE+ ++ D S R FV F A+ T
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVT 174
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCG-QVVDCRICGDPNS-VLRFAFIEFTDEEGAR 310
E+ + T+YV +ID V+E+ L LF G Q+ +I D N +AFIE+ D A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 311 AALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AL L GT+L YP+++ T+ RT+ R T++ ++ ++
Sbjct: 213 NALQALNGTVLANYPLKI------------TWAYRTQQSRSGENFTLFVGDLSPEIDDDS 260
Query: 370 VKLFF 374
+ F
Sbjct: 261 LAATF 265
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEII---RRTVYVSDIDQQVTEEQLAALFVGCGQVV 284
A K+SF + ++N TS + ++ ++V D+ ++ + L F G++
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEIS 123
Query: 285 DCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTF 341
+CRI DP ++ +AF+ F + A AA+N + G LG +R S P
Sbjct: 124 NCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSER 183
Query: 342 LPRTEDEREMCAR----------TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 391
+ + + T+YC +T +K F S G + +R+ D
Sbjct: 184 PRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKDKG 242
Query: 392 HSTRIAFVEFVMVIASS 408
+ AF++F A++
Sbjct: 243 Y----AFIKFTTKEAAT 255
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRF 298
S + + EE+ RR+VYV ++D T E+L A F CG + + C + G P F
Sbjct: 59 SASEVPSSEEVDRRSVYVGNVDYGSTPEELQAHFKECGTINRVTILCDKFTGHPKG---F 115
Query: 299 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+IEF EEGA A+ L ++ ++V +T + ++ T
Sbjct: 116 AYIEFATEEGANNAVILNESLFRGRNLKVSIKRTNVPGISTT 157
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FAFI
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAFI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 28/183 (15%)
Query: 233 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 292
+S G K +M S L + E TV+V+D+ TE+ L ALF CG + + +I
Sbjct: 585 RSDGNKKAKMGSTPPLKRDRE--NSTVFVADLPSGATEDDLTALFKDCGDIREIKITSLA 642
Query: 293 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 352
NS R A IEF D E A L + + V
Sbjct: 643 NS--RVATIEFVDRESVPAGLTKDKKRINGQEISV---------------------HLAW 679
Query: 353 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST-RIAFVEFV-MVIASSTL 410
T+Y TN +KV A ++ F+ G ++ +R +T R +V+F A + L
Sbjct: 680 QSTLYVTNFPEKVDDAYIRQLFDQF-GVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAAL 738
Query: 411 FIH 413
+H
Sbjct: 739 SLH 741
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALNLA 316
T+YV++ ++V + + LF G + D R + RF +++FT +E A+AAL+L
Sbjct: 682 TLYVTNFPEKVDDAYIRQLFDQFGVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAALSLH 741
Query: 317 GTML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLF 373
GT L P+ V S NP R ++ + A R +Y + K V + D+K
Sbjct: 742 GTELEPGLPMNVFIS-------NPE---RKKERTDAGADDREVYVAGLSKFVIRDDLKKL 791
Query: 374 FESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
F++ G V +R+ D + +AFVEF
Sbjct: 792 FKTF-GPVKDIRVTKDDTGLCKGVAFVEF 819
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 302 EFTDEEGARAALNL 315
EF+D+E R +L L
Sbjct: 246 EFSDKESVRTSLAL 259
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 289
RR + F + R LA++EE R+VYV ++D + T EQL F G + I
Sbjct: 10 RRTQKFPETDEERAER--LAKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTIL 67
Query: 290 GDPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
D S L +A++EF + E A++L G +RV P +T I
Sbjct: 68 FDKYSGLPKGYAYVEFENIESVNKAVDLHGKEFRGREIRVSPKRTNI 114
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD 305
S REE RR+V+V ++D +E L F CG V I P + FA++EFTD
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEFTD 170
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAI 334
E A L ML V VL +T +
Sbjct: 171 EAAVETAKGLTNQMLKGRQVTVLNKRTNV 199
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D+D VT+ QL LF GQVV R+C D ++ L + ++ +++ + A
Sbjct: 27 QFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 86
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 87 RALDV----LNFTPLNNKPLRIMYSHRDPSI-------RKSGMANIFIKNLDKTIDHKAL 135
Query: 371 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 136 HDTFSSF-GNILSCKVATDASGQSKGYGFVQF 166
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-T 304
SL E+ +Y+ ++D V +E+L LF G + C++ DP+ + R + F+ F T
Sbjct: 302 SLESVEKYQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFST 361
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSK 331
EE +RA L G M+ P+ V P++
Sbjct: 362 PEEASRALAELNGKMVVSKPLYVAPAQ 388
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C++ D + + +
Sbjct: 103 RIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDASGQSKGYG 162
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F EE A+ A++ L G ++ V V FL + E + +
Sbjct: 163 FVQFDSEEAAQNAIDKLNGMLINDKQVYVG-----------NFLRKQERDSALSNIKFNN 211
Query: 356 IYCTNIDKKVTQADVKLFFE 375
IY N+ + T D+K FE
Sbjct: 212 IYVKNLAESTTDEDLKSIFE 231
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNL 315
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 186 PSLAKTNNNNHG-VNGFNGGFFANNSLIFNNHN-----------ARNGNVNANAAVRRKK 233
P+LA N HG +G +G NN ++ N+++ ++ AN+ V
Sbjct: 218 PNLAPVPGNPHGHFSGVSGTLTGNNGVVTNSNSNLGMGPGHSTIGSGNSIGANSTVSSGT 277
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 293
+ G G R Q +I R +YV +D + E L +F G +V+ + + N
Sbjct: 278 TTGAGPR---------QSSQISR--IYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGN 326
Query: 294 SVLRFAFIEFTDEEGARAAL-NLAGTMLGFYPVRV 327
F FIE+T +E A AL + +L P+RV
Sbjct: 327 RSKGFCFIEYTSQESAEMALATMNRFVLKGRPIRV 361
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 314
RT++V + Q+VTE+ + F G+V D R+ D S A++EF +E +A+
Sbjct: 186 RTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIPSAMR 245
Query: 315 LAGTMLGFYPVRVLPSKT 332
LAG L YPV + PS+
Sbjct: 246 LAGQQLCGYPVAIKPSEA 263
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
VYV I TE+ + + F CG + VDC + + A I F E A+ AL L
Sbjct: 184 VYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFKTEAAAKRALALD 243
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G +G +++ P KT A + F P EM IY N+ +T+ +V+ FF
Sbjct: 244 GADMGGLFLKIQPYKTTRANKSSDFAP------EMVEGYNRIYVGNLPWDITEDEVRKFF 297
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL ++ E R+VY+ ++D T E+L F GCG + + C + G P FA+I
Sbjct: 86 SLEEKIETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ + A+ + ++ ++V+P +T
Sbjct: 143 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 173
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 315
++YV D++Q V EEQL LF QVV R+C D S L + ++ F++ + A A+
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMK- 104
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ ++ N+D + D KL E
Sbjct: 105 ---ALNFTPLNGKPIRIMFSHRDPSI-------RKSGYGNVFIKNLDSTL---DNKLLHE 151
Query: 376 SVC--GEVYRLRLLGDYH-HSTRIAFVEF 401
+ G V ++ D + S FV+F
Sbjct: 152 TFAAFGTVLSCKVAVDSNGQSKGYGFVQF 180
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 117 RIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGYG 176
Query: 300 FIEFTDEEGARAALNLAGTM--------LGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
F++F +EE A A++ M +GF+ + ++T +P
Sbjct: 177 FVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGSP--------------- 221
Query: 352 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N+ + +T D++ F V G + ++ D +R FV F
Sbjct: 222 KFTNVYVKNLSETITNEDLEKVF-GVYGTITSALVMKDQTGKSRGFGFVNF 271
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFIE 302
+ ++ E R++YV ++D T E+L A F GCG V + + G P FA+IE
Sbjct: 82 MEEKIEADSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKG---FAYIE 138
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
F D+E + A+ L ++ ++V P +T V+ T P
Sbjct: 139 FADKESVQTAMALDESLFRGRQIKVCPKRTNRPGVSTTNRP 179
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D + L +A++ + A AL
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE- 93
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 94 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 140
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D ++ FV++
Sbjct: 141 TFCVFGNILSCKVATDASGESKGYGFVQY 169
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D V +E+L LF G + C++ D N R + F+ F + E+ +RA +
Sbjct: 318 LYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMN 377
Query: 317 GTMLGFYPVRV 327
M+G P+ V
Sbjct: 378 NKMVGSKPLYV 388
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGAR 310
E +RTV+ I + E + F G+V D R+ D NS +IEF D
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 278
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTF-----LPRTEDEREMCARTIYCTNIDKKV 365
A+ L+G L PV V PS+ V T L AR +Y N+ +
Sbjct: 279 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSI 338
Query: 366 TQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMV 404
T+AD++ FE+ G+V ++L L + H FV+F +
Sbjct: 339 TEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARL 377
>gi|146197780|dbj|BAF57609.1| polyadenylate-binding protein [Dugesia japonica]
Length = 216
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T+Y+S + VTEE L ++F G V C + NS A++EF +E AR AL++
Sbjct: 14 KTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDNETSARNALSMN 69
Query: 317 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
G +G ++++ + + + FL +T+D I+ NI V +A
Sbjct: 70 GIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLGKTDDST---PTQIFVGNIGSNVDEAI 126
Query: 370 VKLFFESVCGEVYRLRLLGD 389
++ FE + G++ +++ D
Sbjct: 127 LEGGFEHL-GKIIDTKVIRD 145
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 101 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 160
Query: 315 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 161 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 209
Query: 374 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMVIASST 409
F GE+ ++ D S R FV F A+ T
Sbjct: 210 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVT 245
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D S L +A++ + A AL
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 91
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 92 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 138
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D ++ FV++
Sbjct: 139 TFCVFGNILSCKVATDPAGESKGYGFVQY 167
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 306
A RE+ +R +++V++I + TE+Q+ A+ G V+ ++ DP S F F E+ D
Sbjct: 16 AHREKAMR-SIFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDA 74
Query: 307 EGARAAL-NLAGTMLGFYPVRV 327
E AR+A NLAG L P+R+
Sbjct: 75 ETARSACRNLAGRELNGRPLRI 96
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLAG 317
+YV++ E + LF G VVD R N+ RF +++ + A AL L
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQLHK 727
Query: 318 TML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
+L YP++V S P+ T PR+ E R +Y TNID KV + DV+ FF
Sbjct: 728 KLLEEKYPIQVFISD----PLRRT--PRSGAVYE--GRELYVTNIDFKVNEKDVETFFRD 779
Query: 377 VCGEVYRLRL 386
G+V +R+
Sbjct: 780 Y-GQVESVRI 788
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
R +YV++ID +V E+ + F GQV RI N F ++ T + A AL+ A
Sbjct: 757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA 816
Query: 317 GTMLGFYPVRVLPS-------KTAIAPVNPTFLPRTEDERE-------------MCARTI 356
G LG + V+ S KT ++ + L ++ + E + ++++
Sbjct: 817 GKQLGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSL 876
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMV 404
TN+D V +A ++ FES G++YR+ L H A VEF+ +
Sbjct: 877 GVTNVDGTVNEARLRSLFESY-GKLYRVVL----HPEHEGAVVEFLDI 919
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 220 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 279
NG+ A AV + G G L + + ++YV D++ V++ QL LF
Sbjct: 12 NGSPGAVPAVVSPGAVGVG---------LGVAQPLPTTSLYVGDLEGSVSDSQLYELFSQ 62
Query: 280 CGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALNLAGTMLGFYPVRVLPSKTAIAP 336
GQVV R+C D S L +A++ F + + ARA L L P+RV+ S
Sbjct: 63 AGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNNKPIRVMYSN----- 117
Query: 337 VNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
R R + I+ N+DK + + F S
Sbjct: 118 -------RDPSSRRSGSANIFIKNLDKMIDNKSLHETFSS 150
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + ++QL LF G++ C++ D N + + + F+ F T EE ++A +
Sbjct: 324 LYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMN 383
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 352
G M+ P+ V F R ED + M
Sbjct: 384 GKMISGKPLYV------------AFAQRKEDRKAML 407
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 186 PSLAKTNNNNHG-VNGFNGGFFANNSLIFNNHN-----------ARNGNVNANAAVRRKK 233
P+LA N HG +G +G NN ++ N+++ ++ AN+ V
Sbjct: 140 PNLAPVPGNPHGHFSGVSGTLTGNNGVVTNSNSNLGMGPGHSTIGSGNSIGANSTVSSGT 199
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 293
+ G G R Q +I R +YV +D + E L +F G +V+ + + N
Sbjct: 200 TTGAGPR---------QSSQISR--IYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGN 248
Query: 294 SVLRFAFIEFTDEEGARAAL-NLAGTMLGFYPVRV 327
F FIE+T +E A AL + +L P+RV
Sbjct: 249 RSKGFCFIEYTSQESAEMALATMNRFVLKGRPIRV 283
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 231 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG 290
R+ S+ G +T +E RRTV+V + ++ +L F G VVD +I
Sbjct: 210 RRHSYRGGDGGNKRKTPEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVK 269
Query: 291 DPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
D S ++EF DEE + A+ L G L P+ IA + TE E
Sbjct: 270 DRVSGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPI--------IAQL-------TEAE 314
Query: 349 REMCART---------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-H 392
+ ART +Y NI +T+AD+K FE GE+ +L + +
Sbjct: 315 KNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPF-GELEFAQLQKEENGR 373
Query: 393 STRIAFVEFV 402
S FV+F+
Sbjct: 374 SKGYGFVQFI 383
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 240 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLR- 297
R++ + ++ RTVY++++ + TE++L++ F CG V +IC D R
Sbjct: 978 RKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRMGKSRG 1037
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
+ F+EF DE A AL L+ +L + V S AI +P
Sbjct: 1038 YGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSP 1079
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 286 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLP 343
C+ N + + ++EF E+ AR + +G +P+ + K + P P
Sbjct: 914 CKPIEKRNFSVGYCYVEFDREDAAREVIQKLINEIG-WPLDCELEDVKFQVTPSIPMINK 972
Query: 344 RTEDEREM------------CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 391
+E R++ +RT+Y TN+ K T+ ++ FF CG V +++ D
Sbjct: 973 TSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM 1032
Query: 392 HSTR-IAFVEF 401
+R FVEF
Sbjct: 1033 GKSRGYGFVEF 1043
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNL 315
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 21/195 (10%)
Query: 211 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 270
+ F ++ + A V K K++++S+ L EE T++VS++ E
Sbjct: 127 VFFTEESSSKTKCSTGATVTEIKPHAMSKKKIDSK-KLEVNEE---NTIFVSNLASDTDE 182
Query: 271 EQLAALFVGCGQVVDCRIC---GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
+QL LF CGQV D R+ G +A++EFT E AL L T+L + V
Sbjct: 183 DQLHKLFSQCGQVADVRLIKKFGGKFGTNVYAYVEFTTSEPTVEALKLDHTVLNSRAIYV 242
Query: 328 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 387
+ N + ++ T++ TN+ +++ D++ F+ V +V +RL+
Sbjct: 243 -------SSCNADRQNKYNNK-----ATVFVTNVAHDLSERDLEDIFKEV-DQVKAVRLV 289
Query: 388 GDYH-HSTRIAFVEF 401
+ S A++E+
Sbjct: 290 RNKKGRSKGFAYIEY 304
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNL 315
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
>gi|209877643|ref|XP_002140263.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555869|gb|EEA05914.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 302
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGC-GQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
++++ +I TEE + F +++ P + RF ++F G A+ L
Sbjct: 11 SIFIKNISPLATEESVCKAFEDLKNEILGVSFHVYPGTSQRFCQVDFKTSSGVTNAMGLN 70
Query: 317 GTMLGFYPVRVLPSKTAIAPVN-------PTFLPRTEDER------EMCARTIYCTNIDK 363
G+ L P+ + T IAPV P P++ +R E +RTI NI +
Sbjct: 71 GSTLLGVPMSI----TVIAPVPIKLNMKYPKISPKSTTQRSANILEERLSRTILVENIPE 126
Query: 364 KVTQADVKLFFE---SVCGEVYRLRLLGDYHHSTRIAF 398
K TQ ++K+FF S+ + R +GD I F
Sbjct: 127 KFTQNELKIFFSNFGSILDISFEQRQIGDESLRCTIEF 164
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 30/165 (18%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 309
EE +RTV+ + + + L F GQV D RI D NS A+IEFTD+
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 173
Query: 310 RAALNLAGTMLGFYPVRVL---PSKTAIA--------PVNPTFLPRTEDEREMCARTIYC 358
A+ L+G L P+ V+ K +A P+ PT L Y
Sbjct: 174 PLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRL--------------YV 219
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEF 401
++ +T+A VK FE G V ++L+ D + S FV+F
Sbjct: 220 GSLHFNITEAMVKAVFEPF-GTVDSVQLIYDSETNRSKGYGFVQF 263
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 291
+K G + N+ S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 68 EKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 127
Query: 292 PNSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 128 KFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 180
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 111 VLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQSFLPFGPIKSI 170
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P +
Sbjct: 171 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQAVID 229
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 402
++E + R IY +I +T+ D+K FE+ +Y +L H F+E+
Sbjct: 230 EIQEEAKQYNR-IYVASIHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYE 288
Query: 403 M------VIASSTLF 411
IAS LF
Sbjct: 289 TAQAANEAIASMNLF 303
>gi|389584751|dbj|GAB67483.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 601
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ + +Y+ +I + +E+ + ALF G ++ + + AFIEFT+EE +AA
Sbjct: 162 DVFSKIIYMENIPENCSEDDIKALFKNVGTTTSYKLQYNEQKKMNTAFIEFTNEEHVKAA 221
Query: 313 LNLAGTMLG 321
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 315 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 341
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPAF 91
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 306
EE RRTV+V+ + ++T +L F G Q+V R+ G V A++EF E
Sbjct: 212 EERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGRSKGV---AYVEFRRE 268
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY---CT-NID 362
+ + AL L+G + PV V + A N +E R + A + C NI
Sbjct: 269 DSVQVALTLSGKRILGIPVIV---QLTEAEKNRKARELSEQNRALSAELPFHRLCVGNIH 325
Query: 363 KKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+T D+K FE GE+ +RL D + S F++F
Sbjct: 326 FNITDEDLKAIFEPF-GELEYVRLQRDDQNRSKGFGFIQF 364
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 27 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 83
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 84 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 122
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 315
++YV D+DQ V E QL LF QVV R+C D L +A++ F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ G V ++ D + S FV+F
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQF 170
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 9/151 (5%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
VYV ++ + T++ L LF G + + D N + F F+ F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQADVK 371
GT+LG + A + E ER ++ +Y N+D + +K
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLK 334
Query: 372 LFFESVCGEVYRLRLLGDYHH-STRIAFVEF 401
F S G + +++ D H S FV F
Sbjct: 335 ELF-SEYGTITSCKVMLDQHGLSKGSGFVAF 364
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 27/201 (13%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 70 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 129
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ EGA+ AL + G ++G ++V P+ +P
Sbjct: 130 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV---------GRPSNMP 180
Query: 344 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRI 396
+ + DE + A++ IY +I +++ D+K FE+ +Y +L H
Sbjct: 181 QAQQVIDEIQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAPGTSLHTHKGY 240
Query: 397 AFVEFV------MVIASSTLF 411
F+E+ IAS LF
Sbjct: 241 GFIEYANKQAMDEAIASMNLF 261
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 144
Query: 302 EFTDEEGARAALNL 315
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 315
++YV D+DQ V E QL LF QVV R+C D L +A++ F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ G V ++ D + S FV+F
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQF 170
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
VYV ++ + T++ L LF G + + D N + F F+ F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 317 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQ 367
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELKAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHH-STRIAFVEF 401
+K F S G + +++ D H S FV F
Sbjct: 331 EKLKELF-SEYGTITSCKVMLDQHGLSKGSGFVAF 364
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 243 NSRTSLAQR------EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 296
+SRT Q+ EE RTV+V + ++ + L F G++ D R+ D N
Sbjct: 84 SSRTERRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTK 142
Query: 297 R---FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMC 352
R A++EF + E A+ AL L GT L P+++ S V+ T LPR + +
Sbjct: 143 RSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGP 202
Query: 353 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 402
+ +Y ++ +T+ +K FE G++ ++L+ D + S FV +V
Sbjct: 203 MK-LYIGSLHYNITEEMLKGIFEPF-GKIEDIKLIKDPATNRSQGYGFVTYV 252
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
+L ++ E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 111 TLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKG---FAYI 167
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
EFTD++ + A+ L ++ ++V+ +T ++ T P
Sbjct: 168 EFTDKDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTNRP 209
>gi|346472667|gb|AEO36178.1| hypothetical protein [Amblyomma maculatum]
Length = 101
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RT+YV ++D VTEE L A+F GQV C+I +P + + F+EF+D + A +AL
Sbjct: 13 RTLYVGNLDIAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASALLAM 71
Query: 317 GTMLGFYPVRV 327
L F V V
Sbjct: 72 NKRLCFGKVSV 82
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
>gi|340057933|emb|CCC52286.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 371
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG +VDC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 320 LGFYPVRVLPSKTAIA 335
L ++V SK +
Sbjct: 72 LAGRKIKVGISKGNVG 87
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 314
RT++V+ + ++ E L F G+VVD RI D + A++EF +E AA+
Sbjct: 154 RTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQ 213
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
+G +L +PV V+ + A + E ++ A+ + N+ + + D++ F
Sbjct: 214 KSGQLLCGFPV-VVQASQAEKNQAARLAAQVAGELDLPAK-LQVDNLHMDIAEDDLQTLF 271
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
S G+V +R+ ++ ST VEF
Sbjct: 272 -SPFGKVLSVRINKEHGRSTGKGVVEF 297
>gi|294884876|gb|ADF47446.1| TIA1-like protein, partial [Dugesia japonica]
Length = 443
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
+ +++ E +T+Y+S + VTEE L ++F G V C + NS A++EF +
Sbjct: 13 SKMSKMENRNTKTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDN 68
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPV-------NPTFLPRTEDEREMCARTIYC 358
E AR AL++ G +G ++++ + + + FL +T+D I+
Sbjct: 69 ETSARNALSMNGIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLGKTDDS---TPTQIFV 125
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
NI V +A ++ FE + G++ +++ D
Sbjct: 126 GNIGSNVDEAILEGGFEHL-GKIIDTKVIRD 155
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI----CGDPNSVLRFAFIEFTDEE 307
EE +T+YV ++D VTEE L LF G V C+I DP +AFIE+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDP-----YAFIEYASHT 57
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
A+ A LA F+ + + A +P N P+T+ + I+ ++ ++
Sbjct: 58 SAQTA--LAAMNKRFFLKKEIKVNWATSPGN---QPKTDTSQHY---HIFVGDLSPEIET 109
Query: 368 ADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
++ F GE+ R++ D S AFV FV
Sbjct: 110 ETLREAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFV 145
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 238 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDP 292
G R T + +E RRTV+V + ++ +L A F G Q+V RI G
Sbjct: 140 GPRDKQDATPVLNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRS 199
Query: 293 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 352
V ++EF +E+ AL L G L PV V ++ T P +
Sbjct: 200 KGV---GYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVP 256
Query: 353 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI VT+ D++ F+ GE+ ++L D + +R FV+F
Sbjct: 257 FHRLYVGNIHFNVTEQDLQAVFDPF-GELEFVQLQKDETNRSRGYGFVQF 305
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 297
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP + + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRINVPGMSMTNRP 174
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ + E R+VYV ++D T E+L A F GCG + + C + G P FA+I
Sbjct: 38 SIEDKMEADGRSVYVGNVDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKG---FAYI 94
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ A L ++ ++V+P +T
Sbjct: 95 EFADKDSIETAKALDDSLFRGRQIKVVPKRT 125
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 110 VLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 169
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ +L + G MLG ++V+ + + P +
Sbjct: 170 NMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQMNGVMLGGRNIKVV-GRPSNMPQAQAVID 228
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 402
++E + R IY +I ++T+ D+K FE+ Y +L H F+E+
Sbjct: 229 EIQEEAKQYNR-IYVASIHPELTEDDIKNVFEAFGPITYCKLAYGASAHKHKGYGFIEYA 287
Query: 403 MV------IASSTLF 411
+ IAS LF
Sbjct: 288 TLPAALEAIASMNLF 302
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 85 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 141
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 142 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 172
>gi|294886819|ref|XP_002771869.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239875669|gb|EER03685.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 420
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E I++RTVYVS + QVT E++ +F G++ + I P +FA +EF +E A+
Sbjct: 133 EMILKRTVYVSGLANQVTLEEVQGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQE 192
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ + VRV SK + PT
Sbjct: 193 AIRVGEIPYRGRVVRVEKSKETVKLYPPT 221
>gi|71660275|ref|XP_821855.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887244|gb|EAO00004.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 320 LGFYPVRVLPSKTAIA 335
L ++V SK +
Sbjct: 72 LAGRKIKVGVSKGNVG 87
>gi|221058210|ref|XP_002261613.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247618|emb|CAQ41018.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 584
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ + +Y+ ++ E+ + ALF G ++ + + AF+EFT+EE A+AA
Sbjct: 157 DVFSKIIYMENVPPNCREDDIKALFKNVGTTTSYKLHYNEQKKVNTAFVEFTNEEHAKAA 216
Query: 313 LNLAGTMLG 321
L+L GT +G
Sbjct: 217 LHLNGTKIG 225
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 315 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 341
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPPF 91
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-- 294
QG + + A + + ++YV D++ V + QL LF G VV R+C D ++
Sbjct: 10 QGPGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRR 69
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L + ++ +++ + A AL++ L F P+ P + + +P+ R+
Sbjct: 70 SLGYGYVNYSNPQDAARALDV----LNFTPLNGKPLRIMYSHCDPSI-------RKSGTG 118
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 396
I+ N+DK + + F S G + + L Y ++ R+
Sbjct: 119 NIFIKNLDKGIDHKALHDTF-SAFGNILSCKDLDTYQNNMRL 159
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D R + F+ F EE ARAA+ +
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 172 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 220
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV F
Sbjct: 221 EPYGRITSHKLMLDEEGRSRRFGFVAF 247
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDE 306
+Q+ E ++YV ++D V+E L +F G V R+C D + L +A++ F D
Sbjct: 34 SQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDH 93
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 366
E + A+ L + P++ +P + + +P+ R+ + I+ N+ +
Sbjct: 94 EAGKTAIE----KLNYAPIKGVPCRIMWSQRDPSM-------RKKGSGNIFIKNLHPDID 142
Query: 367 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+ F SV G + ++ D ++R FV F
Sbjct: 143 NKALHDTF-SVFGNILSCKIATDEAGNSRGFGFVHF 177
>gi|268570897|ref|XP_002640866.1| Hypothetical protein CBG15757 [Caenorhabditis briggsae]
Length = 296
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RTVYV++I +VTE+ L LF+ G +V +S RFA +EF DEE A+ +
Sbjct: 10 RTVYVANITPEVTEDMLEELFLQAGPLVKVITRNVRDSTARFALVEFEDEESVIFAIKI- 68
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPT 340
+ +R+ + + P N T
Sbjct: 69 -----LHGIRLFDREIQVKPRNNT 87
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++ E ++VYV ++D T E++ F GCG V I D S FA++EFT+++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKD 130
Query: 308 GARAALNLAGTMLGFYPVRVLPSKT 332
G + AL + ++L ++V P +T
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF +EE
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------- 355
AAL L G L PV V P TE E+ AR
Sbjct: 249 AAALQLTGQKLLGIPVIVQP---------------TEAEKNRQARNSESSGHPNSIPFHR 293
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI +T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 294 LYVGNIHFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 339
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-- 289
+K G + N+ S A +EE R+V+V ++D T E++ F CG V I
Sbjct: 68 EKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 127
Query: 290 --GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
G P FA++EF + E + AL L + L ++VLP +T +
Sbjct: 128 KFGQPKG---FAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV 171
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 307
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
A A LN T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINS 130
Query: 368 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
A ++ F G + ++ + S FV+F
Sbjct: 131 ASLQDIFCKF-GNILSCKVAEENGKSKCFGFVQF 163
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 301 IEFTDEEGARAALN-LAGTML 320
++F ++ A AALN L TML
Sbjct: 161 VQFDSDDSATAALNALNDTML 181
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 227 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 277
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 278 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 320
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 76/192 (39%), Gaps = 43/192 (22%)
Query: 238 GKRRMNSRTSLAQREEII------RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 291
G R NSR + E + +RT++V I Q+ L A F G VV+ +I D
Sbjct: 150 GDERRNSRRNNTPPEPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 209
Query: 292 --PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 349
++EF DEE AL L G L P+ IA + TE E+
Sbjct: 210 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPI--------IAQL-------TEAEK 254
Query: 350 EMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 393
AR +Y NI VT+ D++ FE GE+ ++ L D +
Sbjct: 255 NRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNP 313
Query: 394 TR---IAFVEFV 402
R FV+FV
Sbjct: 314 GRSKGYGFVQFV 325
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++ E ++VYV ++D T E++ F GCG V I D S FA++EFT+++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKD 130
Query: 308 GARAALNLAGTMLGFYPVRVLPSKT 332
G + AL + ++L ++V P +T
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAALNL 315
+T++V ++ V +++ F G+V D R D S FA +EF E A+ A L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 316 AGTMLGFYPVRV--LPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
G L PVR+ + AI P N +F ++ + T + D + + +
Sbjct: 525 NGHDLSGRPVRLDFARERGAITPGSGRDNSSF------KKSGQSNTAFVRGFDSSLGEDE 578
Query: 370 VKLFFE---SVCGEVYRLRLLGDYHHSTR--IAFVEFV 402
++ + S CG + R+ + DY T IA+VEF
Sbjct: 579 IRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVEFT 616
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
++ FE GE+ ++L D +R FV+F
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|407407545|gb|EKF31308.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 425
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
R Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+
Sbjct: 8 RYGCYIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKY 67
Query: 316 AGTMLGFYPVRVLPSKTAIA 335
G L ++V SK +
Sbjct: 68 NGFTLAGRKIKVGVSKGNVG 87
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D R + F+ F EE ARAA+ +
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 169 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 217
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV F
Sbjct: 218 EPYGRITSHKLMLDEEGRSRRFGFVAF 244
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAIDESMFRGRQIKVMPKRT 177
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|145539558|ref|XP_001455469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423277|emb|CAK88072.1| unnamed protein product [Paramecium tetraurelia]
Length = 823
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 22/149 (14%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN- 314
+T+++ + +++T ++ AL CG ++CRI D N V + FA+++FT +E A+ A+N
Sbjct: 544 KTIFIKYLPKELTANEVIALIPNCG-ALECRIVKDKNQVSKGFAYVDFTSDEDAQQAVNI 602
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L M+G K A P P+ + ++ T+Y N+ +T+ +
Sbjct: 603 LNNKMVG-------GEKLYAAISKP---PKLYQDDKL---TLYLDNLPYSITEQQLA--- 646
Query: 375 ESVCGE-VYRLRLLGDYHHSTR-IAFVEF 401
+ GE V ++R++ D R A++E+
Sbjct: 647 -AKAGEGVKQIRIVKDSKGKPRGYAYIEY 674
>gi|452840300|gb|EME42238.1| hypothetical protein DOTSEDRAFT_73158 [Dothistroma septosporum
NZE10]
Length = 379
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTD-EEGARAALNL 315
+ V ++ +VT++ L F G V R+ D + F F+EFTD E+G +AA +
Sbjct: 245 IMVGNLAGEVTDDSLTKAFANYG-VNKARVIRDKRTTKSKGFGFVEFTDGEQGFKAAREM 303
Query: 316 AGTMLGFYPVRVLPSKTAIAPV 337
+G +G +PV + ++T +AP+
Sbjct: 304 SGKYIGSHPVTIQRARTNVAPI 325
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
+A +R K FGQ + + L TVYV++ ++ + LF CG+++
Sbjct: 655 SALLRDGKYFGQSQLTVKLGNDL---------TVYVANYPPAADQKYIRDLFKDCGEILS 705
Query: 286 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
R+ ++ RF ++ F D+E + A+ GT+L + + + P
Sbjct: 706 IRLPSLKVDARRRFCYVSFRDQEASAKAVKKDGTVL----------EGGLKLLAKYSDPS 755
Query: 345 TEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVE 400
+ RE R I+ +N+D+ T+AD+K F S G V R+ L + T+ AF++
Sbjct: 756 HKKAREGALAEGREIHISNLDRTATEADLKEVF-SKYGNVTRVNLPRNLVGKTKGFAFID 814
Query: 401 FV 402
F
Sbjct: 815 FA 816
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV------VDCRICGDPNSVLRFAF 300
S A +E+I R+V+V ++D T E++ A F CG V VD + G P FA+
Sbjct: 84 SAASKEDIDARSVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVD-KYTGHPKG---FAY 139
Query: 301 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+EF D++ A++L T+ ++V P +T +
Sbjct: 140 LEFADKDAVNNAMSLNDTVFRGRQLKVTPKRTNV 173
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
+L ++ E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 111 TLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKG---FAYI 167
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EFTD++ + A+ L ++ ++V+ +T
Sbjct: 168 EFTDKDSIQTAMALDESLFRGRQIKVMTKRT 198
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 207 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 266
A N+L N + G RR + R RT E R +Y++ + +
Sbjct: 764 AENALELNGTDMEEG--------RRLSVYISNPERRKERTDSDANE----REIYIAGLSK 811
Query: 267 QVTEEQLAALFVGCGQVVDCR-ICGDPNSVLRFAFIEFTDEEGARAAL 313
VT+E L LF G V D R I D FAFIEFT E ARAAL
Sbjct: 812 LVTKEDLETLFKTYGNVKDVRMILDDKGKSKGFAFIEFTTEPEARAAL 859
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ + + + LF G++ D R S RF ++++T A AL
Sbjct: 710 RSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALE 769
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L GT + + ++ NP D + R IY + K VT+ D++ F
Sbjct: 770 LNGTDMEE------GRRLSVYISNPERRKERTDS-DANEREIYIAGLSKLVTKEDLETLF 822
Query: 375 ESVCGEVYRLRL-LGDYHHSTRIAFVEFV 402
++ G V +R+ L D S AF+EF
Sbjct: 823 KTY-GNVKDVRMILDDKGKSKGFAFIEFT 850
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
TV+V D+ V +E+L ALF CG + + +I PNS++ A +EF + + AAL
Sbjct: 638 TVFVGDLPAGVEDEELRALFKDCGVIREVKITQLPNSLV--ATVEFLERDSVPAALT 692
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 92 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 151
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 152 NMSWDPATQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 210
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 211 EITEESKHYNR-IYIASIHQDLTEEDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 269
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 270 SMQSALEAIASMNLF 284
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 301
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 71 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF ++E + ALNL + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 470 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 529
Query: 316 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 530 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 582
Query: 370 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFV 402
+ S+ CGE+ R+ + DY S +A+++F
Sbjct: 583 IHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFA 623
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 164 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 212
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV F
Sbjct: 213 EPYGRITSHKLMLDEEGRSRRFGFVAF 239
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 302
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 73 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 132
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
F ++E + ALNL + L ++V P +T +
Sbjct: 133 FLEQEAVQEALNLNESELHGRQIKVAPKRTNV 164
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 301
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 77 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF ++E + ALNL + L ++V P +T +
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 168
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
++ FE GE+ ++L D +R FV+F
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 38 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 97
Query: 314 NLAGTMLGFYPVRVLPSKTA--IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L+G +L PV V PS+ + N + R +Y N+ +T+A+++
Sbjct: 98 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLR 157
Query: 372 LFFESVCG-EVYRLRLLGDYHHSTRIAFVEFV 402
FE EV +L L + H FV+F
Sbjct: 158 EIFEPFGQIEVVQLPLDMETGHCKGFGFVQFA 189
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
++ FE GE+ ++L D +R FV+F
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R+VYV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 143
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D+D VT+ QL +F GQVV R+C D ++ L + ++ +++ + A
Sbjct: 8 QFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 67
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 68 RALDV----LNFTPLNNKPIRIMYSHRDPSI-------RKSGMANIFIKNLDKGIDHKAL 116
Query: 371 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 117 HDTFSSF-GNILSCKVATDASGQSKGYGFVQF 147
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 296 LYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 355
Query: 317 GTMLGFYPVRV 327
G ML P+ V
Sbjct: 356 GKMLISKPLYV 366
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 301
S+ ++ E R+VYV ++D T E+L F GCG + I G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 143
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ ++V +E++ +F G + D R + RF +++FT + A+A+L
Sbjct: 723 RSTLYVTNFPERVDDEEVRKIFGKYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLE 782
Query: 315 LAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDER---EMCARTIYCTNIDKKVTQADV 370
L G L P+ V S P + ER + AR +Y + + K ++D+
Sbjct: 783 LHGHELEPNLPLNVYISN-----------PERKKERTDADANAREVYVSGLSKFADKSDL 831
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+ F++ G + +R+ D ++ AFVEF
Sbjct: 832 ERVFKTY-GPIKEIRMTVDEQGRSKGFAFVEF 862
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
TV+V+D+ T++ L ALF CG + D +I PN+ A +EF++ E AAL
Sbjct: 651 TVFVADLPSNTTDDDLKALFKDCGSIRDIKITSLPNT--HVATVEFSERESVPAALT 705
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 313
++V D+ ++ L F G++ DCR+ DP ++ + F+ F +D E A A +
Sbjct: 88 IFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGM 147
Query: 314 NLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDE----REMCARTIYCTNIDKKVTQA 368
N G LG +R ++ AP + P + +E T+YC N+ + T+
Sbjct: 148 N--GQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGNLAQGSTEE 205
Query: 369 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
++ F G++ +R+ D + AF+ F
Sbjct: 206 ALQKIFGPY-GQIQEIRVFKDKGY----AFIRFA 234
>gi|71667313|ref|XP_820607.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885958|gb|EAN98756.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 424
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 320 LGFYPVRVLPSKTAIA 335
L ++V SK +
Sbjct: 72 LAGRKIKVGVSKGNVG 87
>gi|413947084|gb|AFW79733.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 787
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A + ++RTV +S++ +T + + LF CG+VVDC I A++E++ E
Sbjct: 333 ADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTI----TDSKHIAYVEYSKPEE 388
Query: 309 ARAAL-----NLAGTMLGFYPVRVLPSK 331
A AAL N+ G L + LPSK
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKSLPSK 416
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 302
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 77 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 136
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
F ++E + ALNL + L ++V P +T +
Sbjct: 137 FLEQEAVQEALNLNESELHGRQIKVAPKRTNV 168
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 301
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 71 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF ++E + ALNL + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R+VYV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 143
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV +
Sbjct: 224 EPYGRITSHKLMLDEEGRSRRFGFVAY 250
>gi|407846855|gb|EKG02815.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 320 LGFYPVRVLPSKTAIA 335
L ++V SK +
Sbjct: 72 LAGRKIKVGVSKGNVG 87
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 308
EE RTV+V + ++ + L F G++ D R+ D N R A++EF + E
Sbjct: 99 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 157
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQ 367
A+ AL L GT L P+++ S V+ T LPR + + +Y ++ +T+
Sbjct: 158 AQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPMK-LYIGSLHYNITE 216
Query: 368 ADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 402
+K FE G++ ++L+ D + S FV +V
Sbjct: 217 EMLKGIFEPF-GKIEDIKLIKDPTTNRSQGYGFVTYV 252
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 307
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDAS 84
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 367
A A LN T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINS 130
Query: 368 ADVKLFFESVC--GEVYRLRLLGDYHHSTRIAFVEF 401
A ++ F C G + ++ + S FV+F
Sbjct: 131 ASLQDIF---CKFGNILSCKVAEENGKSKCFGFVQF 163
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 301 IEFTDEEGARAALN-LAGTML 320
++F ++ A AALN L TML
Sbjct: 161 VQFDSDDSATAALNALNDTML 181
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 227 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 277
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 278 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 320
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|226505274|ref|NP_001145712.1| uncharacterized protein LOC100279216 [Zea mays]
gi|219884125|gb|ACL52437.1| unknown [Zea mays]
Length = 787
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A + ++RTV +S++ +T + + LF CG+VVDC I A++E++ E
Sbjct: 333 ADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTI----TDSKHIAYVEYSKPEE 388
Query: 309 ARAAL-----NLAGTMLGFYPVRVLPSK 331
A AAL N+ G L + LPSK
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKSLPSK 416
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 302
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 55 SISTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 114
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIA 335
F ++E + ALNL + L ++V P +T +
Sbjct: 115 FLEQEAVQEALNLNESELHGRQIKVAPKRTNVP 147
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDE 306
+E++ R+VYV ++D T E++ F CG V I G P FA++EF ++
Sbjct: 39 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKG---FAYVEFLEQ 95
Query: 307 EGARAALNLAGTMLGFYPVRVLPSKTAI 334
E + ALNL + L ++V P +T +
Sbjct: 96 EAVQEALNLNESELHGRQIKVAPKRTNV 123
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 90 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 147 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 177
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 508
Query: 316 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 509 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 561
Query: 370 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFV 402
+ S+ CGE+ R+ + DY S +A+++F
Sbjct: 562 IHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFA 602
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++D+Q+ + L FV G V+ C++ D + +
Sbjct: 117 RIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYG 176
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE-----DEREMCAR 354
F+ + E A A+ ML + K + P +PR E DE +
Sbjct: 177 FVHYETAEAAETAIKAVNGML------LNDKKVYVGP----HIPRKERQSKLDEMKAQFT 226
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N+D +VTQ + + F + + D S FV +
Sbjct: 227 NLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNY 273
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAA 312
+ ++YV D++ V+E QL LF GQVV R+C D L +A++ + + A A
Sbjct: 26 VSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRA 85
Query: 313 LNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L L ++L P+R++ F R R+ I+ N+DK + +
Sbjct: 86 LELLNFSVLNGNPIRIM------------FSHRDPSIRKSGTANIFIKNLDKTIDNKALH 133
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
F + G + + S FV+F
Sbjct: 134 DTFSAFGGILSCKVAVDGSGQSKGYGFVQF 163
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 250 QREEIIRR----TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFT 304
+R+E I + +Y+ ++D V +E+L LF G + C++ DP R + F+ F+
Sbjct: 299 ERKERIEKYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFS 358
Query: 305 D-EEGARAALNLAGTMLGFYPVRVLPS-----------------KTAIAPVNPTFLPRTE 346
EE RA + G M+G P+ V + +T+++P PT LP
Sbjct: 359 SPEEATRAVTEMNGKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPAVPTSLPMYH 418
Query: 347 DEREMCARTIY 357
M + Y
Sbjct: 419 PGPGMSPQMPY 429
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 302
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 55 SISTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 114
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIA 335
F ++E + ALNL + L ++V P +T +
Sbjct: 115 FLEQEAVQEALNLNESELHGRQIKVAPKRTNVP 147
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
RRT +VS++D + E+++ +F CG++ D R+ + +A++EF DE G AL
Sbjct: 771 RRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEFKDELGVLEALK 830
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
L T P+ P F+ + ED + A+ + T ++K
Sbjct: 831 LDRT-----PIE----------GRPMFVSKCEDRSQKKAQFKFSTAMEK 864
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
SL +++EI R+VYV ++D + E+L A F GCG + I C G P FA+I
Sbjct: 90 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 146
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V+ +T
Sbjct: 147 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 177
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D+DQ V + QL LF GQVV R+C D + L + ++ F++ + A
Sbjct: 31 QFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAA 90
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL++ L F P+ + + +P+ R+ I+ N+DK + +
Sbjct: 91 RALDV----LNFTPLNNRSIRIMYSHRDPSL-------RKSGTANIFIKNLDKAIDHKAL 139
Query: 371 KLFFESVCGEVYRLRLLGDYHH-STRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 140 HDTFSSF-GLILSCKIATDASGLSKGYGFVQF 170
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +++E+L +F G + C++ DP + R + F+ F T EE RA +
Sbjct: 319 LYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMN 378
Query: 317 GTMLGFYPVRV 327
G M P+ V
Sbjct: 379 GKMFAGKPLYV 389
>gi|384245524|gb|EIE19017.1| hypothetical protein COCSUDRAFT_67932 [Coccomyxa subellipsoidea
C-169]
Length = 596
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
R+V+V + E +AA F GCG+V++ I D + R FA +EF++E A AL L
Sbjct: 437 RSVHVQGVSPLAVPEVIAAHFSGCGRVINVTIGRDMQGMSRGFAHVEFSNELEAHNALLL 496
Query: 316 AGTMLGFYPVRVLP 329
+G++L P+ V P
Sbjct: 497 SGSILLQQPITVTP 510
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGA 309
+E++ R+VYV ++D T E++ F CG V I D + FA++EF ++E
Sbjct: 80 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 139
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAI 334
+ ALNL + L ++V P +T +
Sbjct: 140 QEALNLNESELHGRQIKVAPKRTNV 164
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +E++ LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 74 LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 133
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 134 GKMVASKPLYV 144
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D VT+ QL LF GQVV R+C D S L + ++ + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
L F P+ P + + +PT R I+ N+DK +
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAI 126
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +++++L LF G + C++ DP+ V + + F+ F T EE +RA +
Sbjct: 311 LYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMN 370
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|444316030|ref|XP_004178672.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
gi|387511712|emb|CCH59153.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
Length = 439
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 256 RRTVYVSDIDQQV-TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+R + V +ID ++ TEE L F+ CG++ + RI N FAFI F + E A A+
Sbjct: 204 KREILVRNIDNELATEEILKTYFLVCGEIQNIRIISPNNKSNSFAFIIFLNAESAEKAIK 263
Query: 315 LAGTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L + L G P+ + IA P +L R E + + AR
Sbjct: 264 LNNSYLKVGSNPISI-----TIAEQKP-YLERQEIKSLLSAR 299
>gi|343471164|emb|CCD16349.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 369
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGAR 310
++I RTV++ + + + +LAAL CG+ + RICG+ + + F+EF D GA
Sbjct: 104 DVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADRAGAA 163
Query: 311 AALNLAGTML----GFYPVRV 327
A + +G L G P+R+
Sbjct: 164 AMMRRSGMELPNGPGKPPLRL 184
>gi|156100785|ref|XP_001616086.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148804960|gb|EDL46359.1| RNA binding protein, putative [Plasmodium vivax]
Length = 611
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ + +Y+ ++ +E+ + ALF G ++ + + AF+EFT+EE A+AA
Sbjct: 162 DVFSKIIYMENVPANCSEDDIKALFKSVGTTTSYKLQYNEQKKMNTAFVEFTNEEHAKAA 221
Query: 313 LNLAGTMLG 321
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 315 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 341
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISQNPPF 91
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGF 142
Query: 301 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F E A+ A+N + G +L + V V F R E E E+ AR + T
Sbjct: 143 VHFETHEAAQHAINTMNGMLLNDHKVFV-----------GHFKSRREREVELGARAMEFT 191
Query: 360 NIDKKVTQADV------KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
NI K QADV +LF S G++ ++++ D HS FV F
Sbjct: 192 NIYVKNLQADVDEQGLQELF--SQFGKMLSVKVMRDSSGHSRGFGFVNF 238
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
M+ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEASI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + ++ D H S FV F
Sbjct: 117 DTFSTFGNILSCKVACDEHGSRGFGFVHF 145
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 165 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNV- 223
D + LQELFS+ M S+ +++ GF F N F H V
Sbjct: 203 DEQGLQELFSQFGKML------SVKVMRDSSGHSRGFG---FVN----FETHEEAQKAVV 249
Query: 224 --NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQ 272
N R G+ ++R+ + L +R E +++ +YV ++D + +E+
Sbjct: 250 HMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEK 309
Query: 273 LAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPVRV 327
L F G + ++ + F F+ F+ EE +A + G ++G P+ V
Sbjct: 310 LRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
+ ++YV D++ VT+ L LF GQVV R+C D + L + ++ ++ + A A
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARA 81
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L+ ML F P+ P + + +P+ R+ + I+ N+DK + +
Sbjct: 82 LD----MLNFTPLNGSPIRIMYSHRDPSV-------RKSGSGNIFIKNLDKGIDHKALHD 130
Query: 373 FFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D S FV+F
Sbjct: 131 TF-SAFGNILSCKVATDSSGQSKGYGFVQF 159
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T EE ++A + +
Sbjct: 308 LYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMN 367
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 368 GKMVVSKPLYV 378
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ +R++ +++ ++D+ + + L F G ++ C++ D + + +
Sbjct: 96 RIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGYG 155
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F +EE A+ A+ L G +L V V P FL + E E +
Sbjct: 156 FVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-----------FLRKQERESAIDKTRFNN 204
Query: 356 IYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 205 VYVKNLSETTTEEDLKKAF 223
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGA 309
+ + ++YV D+D V + QL LF GQVV R+C D ++ L + ++ + E
Sbjct: 36 QFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEAT 95
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
RA L T L P+R++ S +PT R+ A I+ N+DK +
Sbjct: 96 RALDELNFTPLNGKPIRIMYSYR-----DPTI-------RKSGAGNIFIKNLDKSIDNKA 143
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+ F S G + ++ D +R FV+F
Sbjct: 144 LHDTF-STFGNILSCKVATDSLGQSRGYGFVQF 175
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D +++++L LF G + C++ DPN + R + F+ F T EE ++A +
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 384 GKMVVSKPLYV 394
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 24/141 (17%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C++ D R +
Sbjct: 112 RIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYG 171
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----- 353
F++F +EE A++A++ L G +L V V P FL + ERE A
Sbjct: 172 FVQFDNEESAKSAIDKLNGMLLNDKQVFVGP-----------FL--RKQERESTADKTRF 218
Query: 354 RTIYCTNIDKKVTQADVKLFF 374
+Y N+ + T+ D+K F
Sbjct: 219 NNVYVKNLSETTTEDDLKKIF 239
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D Y +S FV + A++ H +L+ +
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 216
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 75 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 134
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 135 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 182
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D Y +S FV + A++ H +L+ +
Sbjct: 183 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 232
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D Y +S FV + A++ H +L+ +
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 216
>gi|389600963|ref|XP_003722977.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504591|emb|CBZ14490.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 404
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF-TDEEGARA 311
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLRQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D VT+ QL LF GQVV R+C D S L + ++ + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
L F P+ P + + +PT R I+ N+DK +
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAI 126
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 316
+Y+ ++D +++E+L LF G + C++ DP+ V + + F+ F++ EE +RA +
Sbjct: 311 LYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMN 370
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
Q+ E R+VYV ++D + T +L A F CG++ + C + G P +A+IEF
Sbjct: 145 QKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYIEFA 201
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
E A+AA+ L ++ ++VLP +T
Sbjct: 202 TESSAQAAVELDNSVFRGRVIKVLPKRT 229
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 64 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 123
Query: 308 GARAALNLAGTMLGFYPVRV------LP--SKTAIAP-----VNPTFLPR 344
R AL+L+ + ++V +P ++ I+P + P+F PR
Sbjct: 124 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRISPFRGRSIKPSFAPR 173
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 190
Query: 300 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 191 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANF 239
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
+Y NI VT D + FE G+V L D TR FV F
Sbjct: 240 TNVYVKNIAPDVTDEDFRQLFEKF-GDVTSSSLARDQEGKTRGFGFVNFT 288
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 315 LAGTMLGFYPVRVL 328
L T++ P R++
Sbjct: 120 LNYTLIKGRPCRIM 133
>gi|145352361|ref|XP_001420518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580752|gb|ABO98811.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E +RRT +VS+ +T EQ+ LF CG + +CR G P F FIEF + A AA
Sbjct: 94 EELRRTAHVSNYPVGLTTEQVKQLFSFCGSIAECRE-GGPGK--NFCFIEFESNKEALAA 150
Query: 313 LNLAGTMLGFYPVRVLPSKT 332
L G +G +RV +KT
Sbjct: 151 CALNGMQVGGRNLRVELAKT 170
>gi|146083801|ref|XP_001464839.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134068934|emb|CAM67075.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 409
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF-TDEEGARA 311
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F T+++ ARA
Sbjct: 8 TRFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 241 RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSV 295
+M + S A + I R+VYV ++D VT ++L A F CG + + C + G P
Sbjct: 63 QMGTSPSPANSQSIDARSVYVGNVDYAVTPQELQAHFQSCGPINRITILCDKFTGHPKG- 121
Query: 296 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+A+IEF++E+ A+ L T++ ++V P +T +
Sbjct: 122 --YAYIEFSEEDAVGNAVLLNDTVVHGRQIKVNPKRTNV 158
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 446 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 505
Query: 316 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 506 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 558
Query: 370 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFV 402
+ S+ CGE+ R+ + DY S +A+++F
Sbjct: 559 IHQIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFA 599
>gi|398013689|ref|XP_003860036.1| RNA-binding protein, putative [Leishmania donovani]
gi|322498255|emb|CBZ33329.1| RNA-binding protein, putative [Leishmania donovani]
Length = 409
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF-TDEEGARA 311
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F T+++ ARA
Sbjct: 8 TRFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 240 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV-LRF 298
+ N ++ EI R+ +YV + + + E+ L F G V +I D N +
Sbjct: 27 KEFNPASATNGGREISRKVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNY 86
Query: 299 AFIEFTDEEGARAAL 313
AF+EF DE GA AAL
Sbjct: 87 AFVEFVDEAGAAAAL 101
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL + + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRV--FLDKEIKVNWATSPGN---TPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 289
K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G + +
Sbjct: 71 KQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQSFLPFGPIKSINMS 130
Query: 290 GDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 346
DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 131 WDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQAVIDEIQ 189
Query: 347 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFVM-- 403
+E + R IY +I +T+ D+K FE+ +Y +L H F+E+
Sbjct: 190 EEAKQYNR-IYVASIHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYETAQ 248
Query: 404 ----VIASSTLF 411
IAS LF
Sbjct: 249 AANEAIASMNLF 260
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D Y +S FV + A++ H +L+
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLN 212
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D++ V + QL LF GQVV R+C D + L + ++ FT+ + A
Sbjct: 28 QFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAA 87
Query: 311 AALNLAGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
AL++ L F P +RV+ S R R+ I+ N+DK +
Sbjct: 88 RALDV----LNFTPMNNKSIRVMYSH------------RDPSSRKSGTANIFIKNLDKTI 131
Query: 366 TQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
+ F S G++ ++ D S FV+F
Sbjct: 132 DHKALHDTFSSF-GQIMSCKIATDGSGQSKGYGFVQF 167
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D +T+E+L +F G + +I DPN V R + F+ F T EE +RA +
Sbjct: 317 LYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMN 376
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 377 GKMIVSKPLYV 387
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D Y +S FV + A++ H +L+
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLN 212
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
N + R K GK S SL + +YV ++D VTE+ L F G++V
Sbjct: 164 NGSTVRDKQIYVGKFIRKSERSLPDLDAKFT-NLYVKNLDPVVTEKHLGEKFSSFGKIVS 222
Query: 286 CRICGDPNSVLR-FAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
I D N + F F+ + + AR A+ + G+ G + V ++ +
Sbjct: 223 LAIKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHL 282
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
E + IY NID V +++ F S CGEV +++ D +++ FV F
Sbjct: 283 FVEKGLKHMGSNIYVKNIDTSVGDEELRDHF-SACGEVLSAKVMRDDKGTSKGFGFVCFS 341
Query: 403 MVI 405
V+
Sbjct: 342 TVV 344
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T++V ++DQQV EE L LFV G VVD +I D N+ +AF+EF E A A+ +
Sbjct: 7 TIFVGNLDQQVDEELLWELFVQMGPVVDAKIPRDRITNTHSGYAFVEFKHEHDANYAIQV 66
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
ML Y P+RV + ++D++ + ++ N+D +V D KL
Sbjct: 86 L-NMLKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPEV---DEKL 127
Query: 373 FFES 376
+++
Sbjct: 128 LYDT 131
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIEKVNGML------LNGKKVYVG----RFIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFVMVIASST 409
+Y N + +T+ ++ FE G++ +++ D S FV F A+ T
Sbjct: 193 NVYVKNFGEDLTEEQLRTMFEKY-GKITSYKIMSKDDGKSKGFGFVAFESPEAAET 247
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+EE L ALF G V +C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 312 AL 313
AL
Sbjct: 61 AL 62
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 316
T+YV++ E + LF CG++VD R NS RF +++F + A+ A +L
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRRFCYVQFASSDEAQKATSLH 806
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC---ARTIYCTNIDKKVTQADVKLF 373
G LG +T +A ++ P + ER R +Y NID + DV+
Sbjct: 807 GKQLGG-------KETLVAKIS---APDQKHERSGAVYEGREVYIRNIDFQAHDNDVQEL 856
Query: 374 FESVCGEVYRLRL 386
F+ G + ++RL
Sbjct: 857 FQKY-GRIEKVRL 868
>gi|390603148|gb|EIN12540.1| hypothetical protein PUNSTDRAFT_81810 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1034
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALNLA 316
T+Y+++ + ++ + LF G + D R S RF +++FT + A+A+L L
Sbjct: 703 TLYITNFPEGTDDQAIRGLFSKYGTIFDVRWPSKKFKSTRRFCYVQFTSPDAAKASLELH 762
Query: 317 GTML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLF 373
G L P+ VL S NP R ++ + A R IY + K T+AD++
Sbjct: 763 GRELEPGMPLSVLIS-------NPE---RRKERTDANADDREIYVAGLSKFATKADLEKI 812
Query: 374 FESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
F++ G + +R+ L D + AFVEF
Sbjct: 813 FKTY-GTLKDVRMALDDKGNCKGFAFVEF 840
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
T++V+D+ E L ALF CG + D +I PN+V+ A +EF + E AAL
Sbjct: 629 TIFVADLPVNTAEGDLKALFKDCGGIRDIKITKLPNAVV--ATVEFNERESVPAALT 683
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGND-PYAFIEYSTYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
+R V+ I + E + F G+V D R+ D NS +IEF D A+
Sbjct: 225 QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTF-----LPRTEDEREMCARTIYCTNIDKKVTQA 368
L+G L PV V PS+ V T L AR +Y N+ +T+A
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEA 344
Query: 369 DVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMV 404
D++ FE+ G+V ++L L + H FV+F +
Sbjct: 345 DIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARL 380
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV--LRFAFIEFTDEEGARAALN 314
R++YV D++ V E QL LF VV R+C D + L +A++ F++ + A A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
+ L F P+ P + + +PT R ++ N+D K+ D K +
Sbjct: 93 V----LNFTPLNGKPIRIMFSHRDPT-------TRRSGHANVFIKNLDTKI---DNKALY 138
Query: 375 ESVC--GEVYRLRLLGDYH-HSTRIAFVEF 401
E+ G V ++ D + S F++F
Sbjct: 139 ETFASFGPVLSCKVAVDNNGQSKGYGFIQF 168
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ RR+ V++ ++D ++ + L F G V+ C++ D N + +
Sbjct: 105 RIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGYG 164
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 358
FI+F +EE A++A+N L G ++ V V P + + P+ + +Y
Sbjct: 165 FIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTN--------VYV 216
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
N+ + + D+K F S G + ++ D + +R FV F
Sbjct: 217 KNLSETTSDEDLKKIFSSY-GAITSAIVMKDQNGKSRGFGFVNF 259
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGA 309
E++ +Y+ ++ + EE+L LF G + C++ D + + + F+ F T EE +
Sbjct: 310 EKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEAS 369
Query: 310 RAALNLAGTMLGFYPVRV 327
RA + G M+G P+ V
Sbjct: 370 RALSEMNGKMIGKKPLYV 387
>gi|401419092|ref|XP_003874036.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490270|emb|CBZ25530.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 408
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF-TDEEGARA 311
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D Y +S FV + A++ H +L+ +
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 216
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 147 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 203
Query: 302 EFTDEEGARAAL 313
EF+D+E R +L
Sbjct: 204 EFSDKESVRTSL 215
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEG 308
+EE RTV++ + +QVT + F GQV D R+ D NS ++EFTD
Sbjct: 178 QEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASA 237
Query: 309 ARAALNLAGTMLGFYPVRVLPS 330
A+ L+G L P+ V P+
Sbjct: 238 VTLAIKLSGQKLLGVPIMVSPT 259
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
ML Y P+RV + ++D++ + ++ N+D +V D KL
Sbjct: 86 L-NMLKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPEV---DEKL 127
Query: 373 FFES 376
+++
Sbjct: 128 LYDT 131
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRI-CGDPNSVLRFAFIEFTDEEGARAALNLAG 317
++V + +V E+++ F CG++ + ++ G+P V AF+ F E+G AA+ G
Sbjct: 9 IFVGQLPSRVNEDEIRTYFEECGEITNVKVLSGNPQRVA--AFVTFATEDGKNAAIAFNG 66
Query: 318 TML-GFYPVRV--LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
G P+R+ SK + PT TI NI V + VK FF
Sbjct: 67 KDFNGNGPLRINAANSKPSDGEGEPT--------------TIVARNIAFSVDETLVKEFF 112
Query: 375 ESVCGEVYRLRLLGDYHHSTRI---AFVEF 401
+ CG++ R+ L Y S R+ AFV F
Sbjct: 113 QG-CGKITRVSLP-TYEDSGRLKGFAFVSF 140
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 224 NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV 283
NA A K G G R+N+ S E T+ +I V E + F GCG++
Sbjct: 59 NAAIAFNGKDFNGNGPLRINAANSKPSDGEGEPTTIVARNIAFSVDETLVKEFFQGCGKI 118
Query: 284 --VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTML 320
V D + FAF+ F EE A+ LAGTM
Sbjct: 119 TRVSLPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMF 157
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 36/178 (20%)
Query: 245 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-------------- 290
R S ++ + RT+YV ++ +++T + + LF G++ R+ G
Sbjct: 320 RLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVAT 379
Query: 291 -----DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
P + ++ F +E+ A+ AL L G LG +RV S T
Sbjct: 380 ITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLS--------------T 425
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH--STRIAFVEF 401
+++ R ++ NI +T+ +V+ F+S CG++ +R++ D S I +V F
Sbjct: 426 KNKDHDQKRAVFLGNIPFDITEDEVRKHFDS-CGKIESVRIVKDRKSGLSRGIGYVNF 482
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
+R V++ +I +TE+++ F CG++ RI D S L ++ F +++ AL
Sbjct: 433 KRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFENQDSVTLAL 492
Query: 314 NLAGTMLGFYPVRV 327
L GT L +RV
Sbjct: 493 ELNGTNLKNREIRV 506
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----- 283
V ++ + G S S+ + E R+VYV ++D T E+L A F GCG V
Sbjct: 63 VEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTI 122
Query: 284 VDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
+ + G P FA+IEF D+E + AL L
Sbjct: 123 LTDKFTGHPKG---FAYIEFADKEAVQTALAL 151
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF 303
SL +R + TVYV +D++VTE LA LF+ G VV+C + D + + F+EF
Sbjct: 2 ASLTERNQ--DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEF 59
Query: 304 TDEEGARAALNLAGTMLGF-YPVRV 327
E+ A A+ + + F PVRV
Sbjct: 60 LSEDDADYAIKILNMIKLFGKPVRV 84
>gi|157867749|ref|XP_001682428.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68125882|emb|CAJ03486.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 409
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF-TDEEGARA 311
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF 303
SL +R + TVYV +D++VTE LA LF+ G VV+C + D + + F+EF
Sbjct: 2 ASLTERNQ--DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEF 59
Query: 304 TDEEGARAALNLAGTMLGF-YPVRV 327
E+ A A+ + + F PVRV
Sbjct: 60 LSEDDADYAIKILNMIKLFGKPVRV 84
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV +
Sbjct: 224 EPYGRITSHKLMLDEEGRSRRFGFVAY 250
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 165 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 213
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S + FV F
Sbjct: 214 EPYGRITSHKLMLDEEGRSRKFGFVAF 240
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGA 309
E+I + + V+ + Q +T++++ +LF CG+V+ C++ D NS L +AF+++ D A
Sbjct: 3 EKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADA 62
Query: 310 RAAL-NLAGTMLGFYPVRV---LPSKTAIAPVN 338
A+ +L G L ++V PS AI N
Sbjct: 63 NKAISSLNGLRLQSKVIKVSYARPSSAAIKNAN 95
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL +F G VV R+C D S L +A++ + A AL
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 184
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F P+ P + + +P+ R+ I+ N+DK + D K +
Sbjct: 185 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALHD 231
Query: 376 SVC--GEVYRLRLLGDYHHSTR-IAFVEF 401
+ C G + ++ D ++ FV++
Sbjct: 232 TFCVFGNILSCKVATDPAGESKGYGFVQY 260
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEE 307
A+ +EI +RT+YV ++ + TE L ALF G VVD ++ D S + FI +
Sbjct: 39 AKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHV 98
Query: 308 GARAAL 313
GA+ AL
Sbjct: 99 GAQRAL 104
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 23/164 (14%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGAR 310
E +RTV+ + + TE + F G+V D R+ D NS +IEF D
Sbjct: 198 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP 257
Query: 311 AALNLAGTMLGFYPVRVLPSK-----------TAIAPVNPTFLPRTEDEREMCARTIYCT 359
A+ L+G +L PV V PS+ + A V P R +Y
Sbjct: 258 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYG---------AVDRKLYVG 308
Query: 360 NIDKKVTQADVKLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFV 402
N+ +T+A+++ FE EV +L L + H FV+F
Sbjct: 309 NLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFA 352
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL L + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F GE+ R++ D H S AFV FV
Sbjct: 113 EAFAPF-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 374
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 375 ESVCGEVYRLRLLGDYHHSTRIAFVEF 401
E +L + S R FV +
Sbjct: 224 EPYGRITSHKLMLDEEGRSRRFGFVAY 250
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALN 314
++YV D++ V++ QL LF GQVV R+C D S L +A++ +++ + ARA
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
L L P+RV+ S R R + I+ N+DK +
Sbjct: 95 LNFAALNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTI 133
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF +EE
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 310 RAALNLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
AAL L G L PV V P+ + + +P +P +Y NI
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSVP---------FHRLYVGNI 294
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 295 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 334
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ V +QL F G++ DCR+ DP + + F+ F ++ A A+N +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 316 AGTMLGFYPVRV-----LPSKTA-------IAPVNPTFLPRTEDEREMCAR----TIYCT 359
G LG +R P+ A P + P T DE A T+YC
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 360 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
+ + +++ ++ F S G + +R+ D + AFV F
Sbjct: 170 GLGQGLSEELIQKTFSSY-GIIQEIRVFKDKGY----AFVRFA 207
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLR 297
SR+ +E RTV+V + ++ ++L F V Q+V RI G V
Sbjct: 164 SRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV-- 221
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDE 348
++EF DEE + AL L G L P+ V ++ T NP +P
Sbjct: 222 -GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP----- 275
Query: 349 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI VT+ D++ FE GE+ ++L D + +R FV+F
Sbjct: 276 ----FHRLYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQF 324
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 268 TMQAALEAIASMNLF 282
>gi|414876768|tpg|DAA53899.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
gi|414876769|tpg|DAA53900.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
Length = 924
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
T+ A + ++RTV +S++ +T + + LF CG+VVDC + + ++E++
Sbjct: 330 TNKADEADALKRTVQISNLSPLLTVDYIKQLFGFCGKVVDCVMT----DTKQIVYVEYSK 385
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
E A AAL L +G P+ V +K A+ P LP
Sbjct: 386 PEEATAALELNSKSVGGRPLNVEMAK-ALPPKANNNLP 422
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGISST 178
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D NS + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L+ +
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 213
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 268 TMQAALEAIASMNLF 282
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 231 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC 286
K+ G + N+ ++ ++ E R+VYV ++D Q T E+L F GCG + + C
Sbjct: 111 EKELMGSKPAQTNNFPTMEEKLESDSRSVYVGNVDYQATAEELGQHFNGCGSINRVTILC 170
Query: 287 -RICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
+ G P FA++EF + + + AL+L ++ ++V +T
Sbjct: 171 DKYSGHPKG---FAYVEFIESDSVKMALDLDESLFRGRQIKVTAKRT 214
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 241 RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRF 298
M + AQ E +R+VYV +D E+L F CG + I D S F
Sbjct: 85 EMTAEQQAAQSPEQDKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGF 144
Query: 299 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
A+IEF DE + AL L TM ++VL +T + N
Sbjct: 145 AYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPGYN 184
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T+YV +D++VT+ L LFV G VV + D NS F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
M+ Y P++V + + E+ M I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANIFVGNLDPEV---DEKL 115
Query: 373 FFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMVIASST 409
F++ V +V ++ + +S AFV F AS +
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDS 157
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 268 TMQAALEAIASMNLF 282
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D T ++L A F CG++ + C + G P +A+IEF
Sbjct: 134 EKAEADHRSVYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYIEFA 190
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
E A+AA+ L ++ ++VLP +T + ++ T
Sbjct: 191 TESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISST 226
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 268 TMQAALEAIASMNLF 282
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|225438611|ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 396
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 244 SRTSLAQR------EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--V 295
S +SL QR ++ R ++V + T E L A F GQ+ DC + D N+
Sbjct: 73 SDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKA 132
Query: 296 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART 355
+ F+ F +GA AL G + +++ +A + P+ P+++D R
Sbjct: 133 KGYGFVLFKTRQGAVKALKQPGKK-----INNRMTQSQLASMGPSPPPQSQD---TVGRK 184
Query: 356 IYCTNIDKKVTQADVKLFF 374
IY +N+ V ++ FF
Sbjct: 185 IYVSNVQADVDPERLRSFF 203
>gi|391324923|ref|XP_003736991.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Metaseiulus
occidentalis]
Length = 558
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
V+V I + + E++L LF CG++ D R+ DP + L +AFI F +++GA+ A+N+
Sbjct: 175 VFVGKIPKDMFEDELIPLFEKCGKIYDLRLMMDPLTGLNRGYAFITFCEKQGAQEAVNM 233
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 219 RNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFV 278
RNGN+ A V K+ K + ++ E+ RT++V+++ T++ L+ F
Sbjct: 470 RNGNIKPAANV--KEDSTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFN 527
Query: 279 GCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNLAGT 318
CG+V+ I DP + A+IEFT +E A AL+L GT
Sbjct: 528 KCGEVLKATIVTDPATGQPSGSAYIEFTRKEAAENALSLDGT 569
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 225 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR----TVYVSDIDQQVTEEQLAALFVGC 280
A A+ +RK +G + L ++ ++ R TV+V+++ VTE++L LF C
Sbjct: 582 AEASAKRKAE-DEGTPEPTKKARLEEQAKLKRDRENCTVFVAEMPAGVTEDELRTLFKDC 640
Query: 281 GQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV-LPSKTAIAPVNP 339
G + + +I PNS++ A +EF D E AAL + V V L K+
Sbjct: 641 GSIREIKITQLPNSLV--ATVEFMDRESVPAALTKDKKRIRGQEVAVHLAWKS------- 691
Query: 340 TFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST-RIAF 398
T+Y TN +K ++ F GE++ +R ST R +
Sbjct: 692 ---------------TLYVTNFPEKADDKFIRTLF-GKYGEIFDVRWPSKKFKSTRRFCY 735
Query: 399 VEFVMVIAS 407
V+F A+
Sbjct: 736 VQFTSPTAA 744
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
+ T+YV++ ++ ++ + LF G++ D R S RF +++FT A AL
Sbjct: 690 KSTLYVTNFPEKADDKFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALE 749
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L GT L K ++ NP D + R +Y + K VT+ D++ F
Sbjct: 750 LNGTELE------ESHKMSVFISNPERRKERTDS-DADDREVYVAGLSKLVTKEDLENLF 802
Query: 375 ESVCGEVYRLRL-LGDYHHSTRIAFVEF 401
++ G V +R+ L D S AFVEF
Sbjct: 803 KT-YGTVKDVRMILDDKGRSKGFAFVEF 829
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCR-ICGDPNSVLRFAFIEFTDEEGARAAL 313
R VYV+ + + VT+E L LF G V D R I D FAF+EF E ARAAL
Sbjct: 782 REVYVAGLSKLVTKEDLENLFKTYGTVKDVRMILDDKGRSKGFAFVEFETENDARAAL 839
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 238 GKRRMNSRTSLAQREE---IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDP 292
GK+ S T++ +E ++R+V+VS + + + F CG + + ++ D
Sbjct: 2 GKKVEQSNTTVEVQENNDPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDT 61
Query: 293 NSVLRFAFIEFTDEEGARAALNLAGTMLG--FYPVRVLPSKTAIAPVNPTFLPRTEDERE 350
++ + + F+ E A+ A+ L ++ + + + + + N P E
Sbjct: 62 GKIIGYCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAP------E 115
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVM 403
C TI+ N+ T+ +V FFE CG+V +R + YH+S + AF+EF M
Sbjct: 116 DCT-TIFVKNLAFDCTEDEVGEFFEK-CGKVVNVRFV--YHYSQKHFKGFAFIEFKM 168
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC--GD 291
S +G++++ + + E+ T++V ++ TE+++ F CG+VV+ R
Sbjct: 97 SLAKGEKKVEYKNDVKAPEDCT--TIFVKNLAFDCTEDEVGEFFEKCGKVVNVRFVYHYS 154
Query: 292 PNSVLRFAFIEFTDEEGARAALNLAGT 318
FAFIEF AAL L GT
Sbjct: 155 QKHFKGFAFIEFKMNSSVNAALKLNGT 181
>gi|294950711|ref|XP_002786744.1| hypothetical protein Pmar_PMAR029686 [Perkinsus marinus ATCC 50983]
gi|239901080|gb|EER18540.1| hypothetical protein Pmar_PMAR029686 [Perkinsus marinus ATCC 50983]
Length = 195
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E I++RTVYVS + QVT E++ +F G++ + I P +FA +EF +E A+
Sbjct: 51 EMILKRTVYVSGLANQVTLEEVQGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQE 110
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ + VRV SK + PT
Sbjct: 111 AIRVGEIPYRGRVVRVEKSKETVKLYPPT 139
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 242 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFA 299
+ S L EE+ R +YV +I + VT ++L A+F G V+ + D S RF
Sbjct: 54 LASSAVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFG 113
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 358
F+ + E A AA+ +L T +G ++V +++ + ++P+ P E +Y
Sbjct: 114 FVTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPS-APEPEPAFVDSQYKVYV 172
Query: 359 TNIDKKVTQADVKLFFESVCGEV 381
N+ K VT +K FF S GEV
Sbjct: 173 GNLAKTVTTEVLKNFF-SEKGEV 194
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 212
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF- 303
+ AQ+ ++YV ++D VTE L LF GQV R+C D + L +A++ +
Sbjct: 37 TTAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN 96
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 363
+ E+G +A L T++ P R++ S+ +P R+ ++ N+D
Sbjct: 97 SSEDGEKALEELNYTVIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDH 144
Query: 364 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFIHTEFYILHNP 422
+ + F + G + ++ D H +++ FV + A++ H +L+
Sbjct: 145 AIDNKALHDTF-AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEK 203
Query: 423 SI 424
+
Sbjct: 204 KV 205
>gi|291407988|ref|XP_002720199.1| PREDICTED: poly(A) binding protein, cytoplasmic 5 [Oryctolagus
cuniculus]
Length = 382
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 261 VSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNLAG- 317
V D+D VTE+ L F G + RIC DP S L + ++ F A ALN
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
++ P R++ S+ + R+ I+ N+DK + + F S
Sbjct: 82 DLINGKPFRLMWSQP------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SA 128
Query: 378 CGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHN 421
G + +++ D H S A+V F + A++ H L+N
Sbjct: 129 FGNILSCKVVSDDHGSKGYAYVHFDSLAAANRAIWHMNGVRLNN 172
>gi|294893752|ref|XP_002774629.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239880022|gb|EER06445.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 277
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E I++RTVYVS + QVT E++ +F G++ + I P +FA +EF +E A+
Sbjct: 133 EMILKRTVYVSGLANQVTLEEVRGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQE 192
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ + VRV SK + PT
Sbjct: 193 AIRVGEIPYRGRVVRVEKSKETVKLYPPT 221
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 317
T++V ++ Q E+ L LF +V++ +I P + LR+A ++F G AA +L G
Sbjct: 7 TIFVRNLAVQANEQNLRDLFSRLDRVLNVQIMTFPGTSLRYARVDFGTSNGVTAAHSLNG 66
Query: 318 --------TMLGFYPVRVLPSKTAIAPVNPTFLP-------------------------- 343
T+ PV S TA+AP+ +P
Sbjct: 67 QPFHGVPLTVSVTDPVDANASATAVAPLPNLGVPAAQQLAASVTSIRPQPGVGVTTIGGG 126
Query: 344 -RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
R E + RT+Y + + +VT +V+ F GE+ + + + A VEF
Sbjct: 127 VRDSGEEMILKRTVYVSGLANQVTLEEVRGMFGHF-GEIKESSIDVSPYDQCQFALVEF 184
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTD 305
+E + ++VYV ++D VT E+L A F CG + + C + G P FA+IEF +
Sbjct: 52 KEALDAQSVYVGNVDYSVTPEELQAHFAECGPINRVTILCDKFTGHPKG---FAYIEFAE 108
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSKTAI 334
AL G+ML P++V P + I
Sbjct: 109 PSVVPNALLRNGSMLHDRPLKVTPKRMNI 137
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 34/161 (21%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 307
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 308 GARAALNLAGTMLGFYPVRV-------LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 360
A A LN T L P+R+ LP KT +A ++ N
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLPRKTGLA-------------------NLFVKN 123
Query: 361 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+D + A ++ F G + ++ + S FV+F
Sbjct: 124 LDPSINSASLQDIFCKF-GNILSCKVAEENGKSKCFGFVQF 163
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 301 IEFTDEEGARAALN-LAGTML 320
++F ++ A AALN L TML
Sbjct: 161 VQFDSDDSATAALNALNDTML 181
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 227 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 277
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 278 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 320
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 236 GQGKRRMNSRTSL----AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 291
GQG + + L A+R+EI R+V+V +D LA F CG V I D
Sbjct: 53 GQGGKPQKTPEELEKEKAERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTD 112
Query: 292 P-NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 328
+ FA++EF +++ AA+ L GT L +P R L
Sbjct: 113 KFENPKGFAYVEFLEKDAVDAAVLLDGTGLEEFPQRKL 150
>gi|413951768|gb|AFW84417.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 114
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 314
RTV++ ++D++V+E L + + G VVD + D NS+ +AF+E+ EE A+ A+
Sbjct: 7 RTVFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVK 66
Query: 315 L 315
L
Sbjct: 67 L 67
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R ++ F +G + +R+ EE RT++ + Q++ L F G+V D R+
Sbjct: 130 RSRQPFIKGASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 189
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 190 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 249
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ +K FE G++ ++L+ D
Sbjct: 250 G----QTGPMRLYVGSLLFNITEEMLKGIFEPF-GKIENIQLIMD 289
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 160
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 210
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+D V + QL LF QVV RIC D L + ++ F++ A A+++
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P L KT + + R R+ A ++ N+DK + D K F+
Sbjct: 85 ----LNFTP---LNGKT----IRIMYSIRDPSARKSGAANVFIKNLDKAI---DHKALFD 130
Query: 376 --SVCGEVYRLRLLGDYHHSTRI-AFVEF 401
S G + ++ D ++ FV+F
Sbjct: 131 TFSAFGNILSCKIATDASGQSKGHGFVQF 159
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ L +R E+ + TV Y+ ++D V +E+L LF G + C
Sbjct: 276 GKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSC 335
Query: 287 RICGDPNSVLRFA-FIEFTDEEGARAALN-LAGTMLGFYPVRV 327
++ DP+ + R + F+ F+ EGA AL + G M+ P+ V
Sbjct: 336 KVMRDPSGISRGSGFVAFSIAEGASWALGEMNGKMVAGKPLYV 378
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFIEF 303
A+R E R+VY+ ++D T +L F G V + ++ G P FA++EF
Sbjct: 85 AERRESDARSVYIGNVDYPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKG---FAYLEF 141
Query: 304 TDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
+D + +A L G++ P++VLP +T I VN
Sbjct: 142 SDVDSMNKAVATLDGSIFRDRPLKVLPKRTNIPGVN 177
>gi|343474538|emb|CCD13844.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 306
A ++I RTV++ + + + +LAAL CG+ + RICG+ + + F+EF D
Sbjct: 100 AVETDVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADR 159
Query: 307 EGARAALNLAGTML----GFYPVRV 327
GA A + +G L G P+R+
Sbjct: 160 AGAAAMMRRSGMELPNGPGKPPLRL 184
>gi|343474220|emb|CCD14084.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 306
A ++I RTV++ + + + +LAAL CG+ + RICG+ + + F+EF D
Sbjct: 100 AVETDVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADR 159
Query: 307 EGARAALNLAGTML----GFYPVRV 327
GA A + +G L G P+R+
Sbjct: 160 AGAAAMMRRSGMELPNGPGKPPLRL 184
>gi|118372171|ref|XP_001019282.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|89301049|gb|EAR99037.1| nucleolar phosphoprotein [Tetrahymena thermophila SB210]
Length = 320
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T++V ++ +E L F CG+VV+ RI F +EF + G AL +A
Sbjct: 234 KTIFVGNLSFVTNKETLKKFFASCGKVVNARIAEAEGKSRGFGHVEFEERSGVENALKMA 293
Query: 317 GTMLGFYPVRV 327
G + P+RV
Sbjct: 294 GEQIDGRPIRV 304
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+EE L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 312 ALN 314
AL
Sbjct: 61 ALT 63
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QVTEE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|307198835|gb|EFN79611.1| Probable splicing factor, arginine/serine-rich 7 [Harpegnathos
saltator]
Length = 455
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-QVVDCRICGDPNSVLRFAFIEFTDEE 307
++R E IRRT+ V+++D V+ EQL F ++ R+C + +A +E +++
Sbjct: 144 SRRIEEIRRTLIVANLDASVSAEQLLEFFSNNNVEIKYLRMCSRDSDTEHYALVELSEQG 203
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIA 335
AAL L G L P+++ S AIA
Sbjct: 204 AVVAALLLNGKSLAERPIKIYHSTQAIA 231
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 27/183 (14%)
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
+A +R K FG + R+ T L T+YV++ E L LF CG++
Sbjct: 631 SALLRDGKYFGDRQIRVTPGTGL---------TLYVTNYPPTADENYLRKLFKECGEIFS 681
Query: 286 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLP 343
R NS RF +I F + A AA L G L G Y + S P
Sbjct: 682 IRWPSLKVNSHRRFCYISFRTVDAAAAATKLDGQSLGGMYKLVAKHSD-----------P 730
Query: 344 RTEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 399
+R+ R I+ T+ID +T +++ F S G+V R+ LL ++ AFV
Sbjct: 731 PNRQKRQGALAEGREIHVTSIDPSITPDELEKLF-SKYGKVERVNLLTKVSGESKGAAFV 789
Query: 400 EFV 402
F
Sbjct: 790 SFA 792
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDCRICGDPNSVLRFAFIEFTDEEGARAA 312
R ++V+ ID +T ++L LF G+V + ++ G+ AF+ F +EGA AA
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGA---AFVSFATKEGAAAA 800
Query: 313 LNLAGTML-------------GFYPVRVLPSKTAIAPVNP------TFLPRTEDEREMCA 353
L+L T L F P SK + A P + P + A
Sbjct: 801 LDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRSSASPGPAGDYAMSPSPAAAESLNTHA 860
Query: 354 ----------RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 403
RT+ NI V A V+ ES GE+ +L L D H I + +
Sbjct: 861 QHTSGGGISNRTLCLMNIPDTVNDARVRALAESY-GEILKLSLRLD-HQGAIIEYTDAAS 918
Query: 404 V 404
V
Sbjct: 919 V 919
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D++ VT+ QL LF GQVV R+C D ++ L + ++ +++ A A+
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME- 97
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
ML F PV + + +PT R+ + I+ N+DK + + F
Sbjct: 98 ---MLNFTPVNGKSIRVMYSHRDPTL-------RKSGSANIFIKNLDKSIDNKALHDTFS 147
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
S G + ++ D + S FV++
Sbjct: 148 SF-GNILSCKIATDSNGQSKGYGFVQY 173
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 381
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 382 GKMIVSKPLYV 392
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ +R++ +++ ++D+ + + L F G ++ C+I D N + +
Sbjct: 110 RVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYG 169
Query: 300 FIEFTDEEGARAALNLAGTML 320
F+++ +EE A+ A++ ML
Sbjct: 170 FVQYDNEESAQGAIDKLNGML 190
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 443
Query: 316 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 372
G L VR + + A P N + R ++T++ DK + + +++
Sbjct: 444 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 502
Query: 373 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEF 401
F CGE R+ + D+ +S A+++F
Sbjct: 503 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 536
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 201 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 260
Query: 314 NLAGTMLGFYPVRVLPSKTA--IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L+G +L PV V PS+ + N + R +Y N+ +T+A+++
Sbjct: 261 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLR 320
Query: 372 LFFESVCG-EVYRLRLLGDYHHSTRIAFVEFV 402
FE EV +L L + H FV+F
Sbjct: 321 EIFEPFGQIEVVQLPLDMETGHCKGFGFVQFA 352
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 121 RARPPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLI 180
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 181 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 240
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 241 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 280
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 60 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 119
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 120 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 178
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 179 EITEESKHYNR-IYIASIHQDLTEEDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 237
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 238 TMQAALEAIASMNLF 252
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N + +T +K FE ++ D S FV F
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E +R++YV ++D T EQL + F CG++ + C + G P +A+IEF
Sbjct: 134 EKVEADQRSIYVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKG---YAYIEFA 190
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
D+ + A+ L ++ ++VLP +T + ++ T
Sbjct: 191 DKSSVKVAMELDESVFRDRVIKVLPKRTNMPGISTT 226
>gi|296082474|emb|CBI21479.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 244 SRTSLAQR------EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--V 295
S +SL QR ++ R ++V + T E L A F GQ+ DC + D N+
Sbjct: 87 SDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKA 146
Query: 296 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART 355
+ F+ F +GA AL G + R+ +++ +A + P+ P+++D R
Sbjct: 147 KGYGFVLFKTRQGAVKALKQPGKKIN---NRM--TQSQLASMGPSPPPQSQD---TVGRK 198
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEV 381
IY +N+ V ++ FF GE+
Sbjct: 199 IYVSNVQADVDPERLRSFFAKF-GEI 223
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 245 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF 303
+T A+ EE VY+ ++D V E+ L F G++V I D N + + +AF+ F
Sbjct: 190 KTDRAKAEEKYT-NVYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNF 248
Query: 304 TDEEGAR-AALNLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--IY 357
E AR AA + GT G Y R + F + E E+ M A+ IY
Sbjct: 249 DKPEDARWAAETMNGTRFGSKCLYVGRAQKKAEREQLLREQFKEKHE-EQMMKAKVSNIY 307
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
NI+ VT+ +++ F S CG + +L+ D
Sbjct: 308 VKNINVGVTEEELRKHF-SQCGTITSTKLMCD 338
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 240 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLR 297
R R + +E RRTV+V + ++ +L F G V + +I D N
Sbjct: 166 RNSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKG 225
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRTEDER 349
++EF EE AAL L G L PV V P+ + + + +P +P
Sbjct: 226 VGYVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP------ 279
Query: 350 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI +T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 280 ---FHRLYVGNIHFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 328
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 47.0 bits (110), Expect = 0.021, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEG 308
+E +R VYV +++QV EE L A FV G +V+ + D N+ F F+EF EE
Sbjct: 3 KEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEED 62
Query: 309 ARAAL-NLAGTMLGFYPVRVLPSK 331
A+AA+ N+ G L +RV +K
Sbjct: 63 AKAAIDNMDGAELYGKVLRVNAAK 86
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
RR + G G R + S +R+ RTV+ + Q+V L F G+V D R+
Sbjct: 231 RRSPNGGAGDRTPPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMI 287
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A+IEF D E AL L+G L P+ V + K + P F P+
Sbjct: 288 TCNKTKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPK 347
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 348 S----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDVIQLIMD 387
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFI 301
S ++ EI R++YV ++D T E+L A F GCG + I C G P FA+I
Sbjct: 83 SAEEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +E AL + T+ ++V P +T
Sbjct: 140 EFGSKEFVETALAMNETLFRGRQIKVNPKRT 170
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S ++ E R++YV ++D T ++L A F CG++ + C + G P +A+I
Sbjct: 131 SPLEKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYI 187
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF E A+AA+ L ++ ++VLP +T + ++ T
Sbjct: 188 EFATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISST 226
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-LAG 317
V+V +I T ++L A+F CG++V C + RFAFIE+ E A ALN L G
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDM------RKRFAFIEYHKPESASDALNQLNG 228
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 377
+L ++V P + + R + NI++ + D+K F +
Sbjct: 229 YILHGEKIKVKPHSDNSN----RYREKVPPPRHKPGYAVTVANIEETTSWQDLKDFGR-L 283
Query: 378 CGEV 381
GEV
Sbjct: 284 AGEV 287
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R++YV ++D T ++L F CG V + C R G P FA+IEF+D + ++
Sbjct: 80 RSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVQS 136
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
A+ L T+ ++VLP +T + ++ T
Sbjct: 137 AIGLHETLFRGRVLKVLPKRTNMPGISTT 165
>gi|297835442|ref|XP_002885603.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
gi|297331443|gb|EFH61862.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
Length = 985
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+++ + VS++ +T EQL LF CG VVDC I A+IE+++ E A AAL
Sbjct: 348 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSIT----DSKHLAYIEYSNSEEATAALA 403
Query: 315 LAGTMLGFYPVRV 327
L T + P+ V
Sbjct: 404 LNNTEVFGRPLNV 416
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 377 VCGEVYRLRLLGDYH--HSTRIAFVEFV 402
GE+ R++ D H S AFV FV
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFV 144
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTD 305
LA++EEI R+VYV ++D Q T EQL + F G + I D S L +A++EF
Sbjct: 45 LAKQEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEI 104
Query: 306 EEGARAAL-NLAGTMLGFYPVRVLPSKT 332
E A+ L G +RV P +T
Sbjct: 105 PESVEKAIEELHGKEFRGRDLRVTPKRT 132
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 44/190 (23%)
Query: 161 DFKRDMRELQELFSKLNPMAEEFVPPSLAKT-----NNNNHGVNGFNGGFFANNSLIFNN 215
D KR ++E++E +KL+ M + V + K N N +G +G +NS
Sbjct: 41 DMKRRVKEMEEEAAKLSEMQSQ-VESQMGKNTASSLNELNASASGSSGHAIGSNS----- 94
Query: 216 HNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAA 275
N + N N S T+L +VYV +D T E+L A
Sbjct: 95 ----NTSTNPNGG---------------SSTALDDS------SVYVGQVDYGSTPEELQA 129
Query: 276 LFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
LF CG + + C + G P +A+IEF ++ +AL L TM ++V P
Sbjct: 130 LFQSCGTINRVTILCDKFTGQPKG---YAYIEFASKDAVESALLLNDTMFRGRQLKVTPK 186
Query: 331 KTAIAPVNPT 340
+ + N T
Sbjct: 187 RQNVRGFNYT 196
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D + +++L LF G + C++ DPN + R + F+ F T EE +RA ++
Sbjct: 316 LYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMN 375
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 376 GKMVASKPLYV 386
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
+ + ++YV D++ VT+ L LF G VV R+C D ++ L + ++ + + + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
AL+ ML F P+ P + + +P+ R I+ N+DK + D
Sbjct: 88 RALD----MLNFTPLNGKPIRIMYSFRDPSI-------RRSGTANIFIKNLDKAI---DN 133
Query: 371 KLFFE--SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
K ++ S G + ++ D S FV+F
Sbjct: 134 KALYDTFSTFGAILSCKIATDASGQSKGYGFVQF 167
>gi|325188438|emb|CCA22974.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCG-QVVDCRICGDPNS----VLRFAFIEFTDEEGAR 310
R T++VS+ID++VTE+QL ++F + R+ + FA++ F DEE +
Sbjct: 665 RHTLFVSNIDKEVTEDQLRSIFSDSAPNLQSVRLVAKKRAHGLKSRGFAYVSFLDEESCQ 724
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD- 369
AL L G ++ PVR+ ++ L +ED RT+Y N+ +++ +D
Sbjct: 725 TALQLDGMVVKGKPVRI--HSYDVSTGTSFSLTHSEDS---AMRTLYIGNL-QRILASDT 778
Query: 370 -------VKLFFESVCGEVYRLRLLGDYH---------HSTRIAFVEF 401
+K + +V L L + + H+ + A VEF
Sbjct: 779 IRGNASALKSVLQDAISQVVDLSELEEIYVPQEQRGNRHAKKYALVEF 826
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 212
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T+Y+ ++DQ+VT++ + LF+ CG VV+ I D S + F+EF EE A A+ +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 316 AGTMLGFY--PVRV 327
M+ Y P++V
Sbjct: 80 M-HMIKLYGKPIKV 92
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-----CGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V I G P FA+I
Sbjct: 2 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKG---FAYI 58
Query: 302 EFTDEEGARA-ALNLAGTMLGFYPVRVLPSKT 332
EF+D+ R +L L ++ ++V+P +T
Sbjct: 59 EFSDKGVRRGPSLALDESLFRGKEIKVIPKRT 90
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ V++ ++D+ + + L F G ++ C+I D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYGF 142
Query: 301 IEFTDEEGARAALNLAGTML----GFYPVRVLPSKTAIA 335
+ F EE AR A+ ML Y + +P K IA
Sbjct: 143 VHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIA 181
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG--TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
T+ G P+R++ S+ R R+ ++ N+DK + D K
Sbjct: 72 MNFDTIKG-RPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKAL 115
Query: 374 FE--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
++ S G + ++ D + S FV F
Sbjct: 116 YDTFSAFGNILSCKIASDENGSKGYGFVHF 145
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|318087014|gb|ADV40099.1| TIA-1-like protein [Latrodectus hesperus]
Length = 166
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 309
Q E +T+YV ++D VTEE + ALF G V +I +P + + F+EFTD + A
Sbjct: 23 QSNESHPKTLYVGNLDPTVTEELILALFGQIGPVKGYKIIQEPGND-PYCFVEFTDHQSA 81
Query: 310 RAAL 313
AAL
Sbjct: 82 AAAL 85
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGARAALNLA 316
V++S + +E + +LF CG+++ ++ D N +L + I F+D E + AL L
Sbjct: 4 VFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALALN 63
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
GT LG + V +K P P P C TI+ N+ + + F
Sbjct: 64 GTQLGGRYIDVKEAK-GTQPQKPNVPPPD------CL-TIFVKNLSYDLNADQIGDSFRP 115
Query: 377 VCGEVYRLRLL 387
CG+V +R++
Sbjct: 116 -CGKVANVRMV 125
>gi|149578821|ref|XP_001507009.1| PREDICTED: RNA-binding protein 7-like [Ornithorhynchus anatinus]
Length = 273
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V ++D +VTEE L LF G V++ +I D + + FAF+ F EE +NL
Sbjct: 10 RTLFVGNLDTKVTEELLFELFHQAGPVINVKIPKDKDGKPKQFAFVNFKHEESVPYGMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R++YV ++D T ++L A F CG++ + C + G P +A+IEF
Sbjct: 134 EKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYIEFA 190
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
E A+AA+ L ++ ++VLP +T + ++ T
Sbjct: 191 TESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISST 226
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 191
Query: 300 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 192 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKANF 240
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
+Y NI + T+ D + FE G+V L D +R FV F
Sbjct: 241 TNVYVKNISPEATEDDFRQLFEQY-GDVTSSSLARDQEGKSRGFGFVNFT 289
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 120 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 179
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 180 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 239
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 240 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 279
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L+ +
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 212
>gi|407036329|gb|EKE38119.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 413
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAA 312
IR+T++V ++ ++ EEQL LF G++ +I + S + F+ FT++E +
Sbjct: 279 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKG 338
Query: 313 LNLAGTMLGFYPVRVLP 329
LN+ G + +RV P
Sbjct: 339 LNMVGEKIKGRQIRVEP 355
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +RR+ V+V ++D+ V + L F G G+++ ++ D +AF
Sbjct: 82 RLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAF 141
Query: 301 IEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F + A A+ + G ++ PV V P F PR + E E+ +R T
Sbjct: 142 VHFQSQSAANCAIEQMNGKVINDRPVFVAP-----------FKPRKDREAELRSRASEFT 190
Query: 360 NI 361
N+
Sbjct: 191 NV 192
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 30/154 (19%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ + TE+ L F G V+ RIC D L +A++ F A+ AL+
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-----TIYCTNIDKKVTQAD 369
++ P+R++ S +R+ C R ++ N+D+ V D
Sbjct: 71 MNFDVIKGRPIRLMWS-----------------QRDACLRRSGIGNVFVKNLDRSV---D 110
Query: 370 VKLFFE--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
K +E S G++ +++ D S AFV F
Sbjct: 111 NKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHF 144
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +RR+ +++ ++D + + L F G+V+ C++ D N + F
Sbjct: 124 RLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGNSKGFG 183
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE---REMCAR- 354
F+ + +E A+AA+ N+ G +L + V P L + + E +EM
Sbjct: 184 FVHYESDEAAQAAIENINGMLLNGREIYVGP-----------HLAKKDRESRFQEMIKNY 232
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFV 402
++ N D + T+ +++ FES G + + L D H+ FV F
Sbjct: 233 TNVFVKNFDTESTEDELRELFESY-GPITSIHLQVDSEGHNKGFGFVNFA 281
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 207
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VY+ +IDQ VTEE+ LF G++ + D R F F+ F+ E A+AA++
Sbjct: 232 VYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 121 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 180
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 181 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 233
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID+ VT+ + + FE GE+ L D +R FV F
Sbjct: 234 IKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNF 277
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 301
SL ++ E+ R++YV ++D E+L F GCG + I G P FA+I
Sbjct: 85 SLEEKLEVDNRSIYVGNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 141
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF D++ + A+ + ++ ++V P +T
Sbjct: 142 EFADKDSVQTAMAMDESLFRGRQIKVNPKRT 172
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 120 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 179
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 180 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 239
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 240 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 279
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 124 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 180
Query: 302 EFTDEEGARAALNL 315
EF+++E R ++ L
Sbjct: 181 EFSEKESVRTSMAL 194
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 207
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VY+ +IDQ VTEE+ LF G++ + D R F F+ F+ E A+AA++
Sbjct: 232 VYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 121 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 180
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 181 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 233
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID+ VT+ + + FE GE+ L D +R FV F
Sbjct: 234 IKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNF 277
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 136 RIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 195
Query: 300 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 196 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANY 244
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI+ +VT+ + + F S GEV L D +R FV F
Sbjct: 245 TNVYVKNINLEVTEEEFRELF-SKYGEVTSSTLARDQEGKSRGFGFVNF 292
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QVTEE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S ++ E R++YV ++D T ++L A F CG++ + C + G P +A+I
Sbjct: 130 SPLEKAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHQVTILCDKFSGHPKG---YAYI 186
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF E A+AA+ L ++ ++VLP +T + ++ T
Sbjct: 187 EFATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISST 225
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D + +S FV + A++ H +L+
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L+ +
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 213
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTD 305
LA++EEI R+VYV ++D Q T EQL F G G + I D S L +A+IEF
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 306 EEGARAALN-LAGTMLGFYPVRVLPSKTAI 334
E + A++ L G +RV +T +
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNL 108
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QVTEE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
M+ Y P+RV +K ++D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFVGNLDPDV---DEKL 127
Query: 373 FFES 376
+++
Sbjct: 128 LYDT 131
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++Y+ ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 70 SLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 129
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P+ R+M ++ N+D + + F
Sbjct: 130 LNYTLIKGRPCRIMWSQR-----DPSL-------RKMGTGNVFIKNLDPAIDNKALHDTF 177
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
S G++ ++ D +S FV F V +++ H +L++ +
Sbjct: 178 -SAFGKILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKV 227
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D + +S FV + A++ H +L+
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTD 305
LA++EEI R+VYV ++D Q T EQL F G G + I D S L +A+IEF
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 306 EEGARAALN-LAGTMLGFYPVRVLPSKTAI 334
E + A++ L G +RV +T +
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNL 108
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ + T +G +A
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 120
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ A I+ N+D + + F
Sbjct: 121 LNYTLIKGRPCRIMWSQ------------RDPALRKTGAGNIFIKNLDAAIDNKALHDTF 168
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D H +++ FV + A+S H +L+
Sbjct: 169 -AAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLN 214
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 122 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 181
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 182 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 241
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 242 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 281
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 122 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 181
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 182 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 241
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 242 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 281
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
SL + + R++++ ++D T E+L + F GCG V + C + G P FA++
Sbjct: 34 SLEDKLDADSRSIWIGNVDYAATAEELGSHFHGCGSVNRATILCDKFSGHPKG---FAYV 90
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
EF D++ A L ++ ++V P +T ++ T P + R AR
Sbjct: 91 EFVDKDSVETAQALDDSLFKGRQIKVTPKRTNRPGISSTNRPPSGRFRRGGAR 143
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 316
TV+VS++D + TEE + + F G +VD R+ P R + F+EF+ E A+ AL L
Sbjct: 689 TVFVSNLDFKATEEMIRSQFEQIGNIVDVRLVRKPTGRSRGYGFVEFSSPEAAQKALALD 748
Query: 317 GTMLGFYPVRVLPS 330
+ P+ V PS
Sbjct: 749 RQPVLNRPMYVSPS 762
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE+ L F G V+ RIC D L +A++ F A+ AL+
Sbjct: 110 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 169
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 170 MNFDMIKGKPIRLMWSQ------------RDAYLRKSGIGNVFIKNLDKSI---DNKTLY 214
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
E S G++ +++ D S AFV F
Sbjct: 215 EHFSAFGKILSSKVMSDDQGSRGYAFVHF 243
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L+ +
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKV 212
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 109 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 156
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 157 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 206
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A+ H +L++ +
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 213
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLA 316
+YV ++D Q+++++L F CG + R+ DPN R F F+ F T EE +A +
Sbjct: 334 LYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMN 393
Query: 317 GTMLGFYPVRV 327
G ++ PV V
Sbjct: 394 GKLISGKPVYV 404
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D + +S FV + A++ H +L+
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 208
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 316
+Y+ ++D +TE L F G+++ I D N + + FAF+ + + + AR A+ +
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPDDARKAMEAMN 252
Query: 317 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
G G Y R ++ F R E + A +Y NID VT +++
Sbjct: 253 GLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 373 FFESVCGEVYRLRLLGD 389
F S CG + ++++ D
Sbjct: 313 LFSS-CGTITSVKVMRD 328
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 250 QREEIIR---RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD 305
++E+I++ +YV +ID VT+++L LF CG + ++ D + + F F+ F++
Sbjct: 284 RKEQILKYQASNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSN 343
Query: 306 -EEGARAALNLAGTMLGFYPVRV 327
EE +A + G M P+ +
Sbjct: 344 PEEANKAVRSFNGCMFHRKPLYI 366
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 251 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEG 308
+EE +RTV+V + + +QL A F G VV+ +I D S ++EF DEE
Sbjct: 206 QEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEES 265
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART------------- 355
+ AL L G L P+ + TE E+ ART
Sbjct: 266 VQKALELTGQKLMNIPI---------------IVQLTEAEKNRQARTSEGQPTQSNGIPF 310
Query: 356 --IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFV 402
+Y NI + ++D++ FE GE+ ++L D S FV+F
Sbjct: 311 HRLYVGNIHFSIEESDLRDVFEPF-GELEFVQLQKEDTGRSKGYGFVQFA 359
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A+ H +L++ +
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 213
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 64 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 123
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVN-PTFLP 343
R AL+L+ + ++V + I N P P
Sbjct: 124 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISP 160
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A+ H +L++ +
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 213
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
+ ++ E+ R+VYV ++D T E+L F GCG V + C + G P FA++
Sbjct: 30 TFEEKAEVDARSVYVGNVDYSATAEELEQHFHGCGSVNRVTILCDKFSGHPKG---FAYV 86
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF+D++ A+ L+ ++ ++V+ +T
Sbjct: 87 EFSDKDSVDNAVLLSDSLFKGRQIKVVLKRT 117
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEF 303
T+ + E + ++YV D+D V+E L +F G V R+C D + L +A++ F
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNF 83
Query: 304 TDEEGARAALNLAGTMLGFYPVR 326
D + A+ A+ L F P++
Sbjct: 84 NDHDAAKTAIE----KLNFTPIK 102
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 238 GKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 294
G+R + + A+ E E +RTV+ I + TE + F G+V D R+ D NS
Sbjct: 156 GRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNS 215
Query: 295 VLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM- 351
++EF D A+ L+G +L PV V PS+ V T
Sbjct: 216 RRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGP 275
Query: 352 ---CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFV 402
AR +Y N+ +T+ +++ F G V +++ + + H F++F
Sbjct: 276 YSGGARRLYVGNLHPNITEDNLRQVF-GAFGTVELVQMPVDESGHCKGFGFIQFT 329
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 203
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 117 RIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYG 176
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 177 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNIY 229
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
NID ++T + ++ FE+ GE+ L D +R FV +
Sbjct: 230 IKNIDLEITDDEFRVMFEAF-GEITSATLSHDQDGKSRGFGFVNYA 274
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEE 307
+++ I ++V++ ++D T E++ F GCGQ+V I D + + FA+IEF D
Sbjct: 48 EQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSS 107
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAI 334
AL + G++ P+ V +T I
Sbjct: 108 SIENALVMNGSLFRSRPIVVTAKRTNI 134
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 7/153 (4%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAAL 313
+RT++V I Q+ L A F G V++ +I D ++EF DEE AL
Sbjct: 149 KRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGVGYVEFKDEESVAKAL 208
Query: 314 NLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L G L P+ L P+ +Y NI VT+ D+
Sbjct: 209 ELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEQDLHT 268
Query: 373 FFESVCGEVYRLRLLGDYHHSTR---IAFVEFV 402
F + GE+ ++ L D + R FV+FV
Sbjct: 269 IF-APFGELEQVTLQRDETNPARSKGYGFVQFV 300
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAAL-N 314
++YV D+D VT+ QL F QVV R+C D N+ L + ++ +++ E A A+
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 102 LNYSTLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETF 149
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
S CG + ++ D+ +R FV+F
Sbjct: 150 -SGCGTIVSCKVAADHMGQSRGYGFVQF 176
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGARAALN-LA 316
+YV ++D VT+E+L LF G + C++ DP+ + + F+ F+ A LN +
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 317 GTMLGFYPVRV 327
G M+G P+ V
Sbjct: 385 GKMVGGKPLYV 395
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D T E+L F GCG + + C + G P FA+IEF
Sbjct: 105 EKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKG---FAYIEFA 161
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
D + A+ + ++ ++V P +T ++ T P R M
Sbjct: 162 DMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAM 208
>gi|302755076|ref|XP_002960962.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
gi|300171901|gb|EFJ38501.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
Length = 755
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T +VS+ID ++TE++L F CG + R+ D N+ A+I+F +EE AA++
Sbjct: 628 TAFVSNIDLELTEKELKEFFAPCGGLKGVRLLRDRNTRRSRGLAYIDFENEENLAAAISK 687
Query: 316 AGTMLGFYPVRVLPSK 331
T LG V V SK
Sbjct: 688 NRTKLGARKVSVARSK 703
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 315
++YV ++D VTE L +F G V R+C D L +A++ F ++ AL
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALE- 105
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L + P++ P + + +P R+ A IY N+D + + F
Sbjct: 106 ---ELNYSPIKERPCRIMWSQRDPAL-------RKTGAGNIYIKNLDPAIDNKALHDTF- 154
Query: 376 SVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
S G++ ++ D + +S FV + ++ + H +L++ +
Sbjct: 155 SAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKV 204
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 203
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 16/166 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 117 RIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYG 176
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 177 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNIY 229
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
NID ++T + + FE+ GE+ L D +R FV +
Sbjct: 230 IKNIDLEITDDEFRTMFEAF-GEITSATLSHDQDGKSRGFGFVNYA 274
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 315
++YV ++D V+E L +F G V R+C D + L +A++ F D E R A+
Sbjct: 51 SLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIE- 109
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L + P++ P + + +P R+ A I+ N+ + + F
Sbjct: 110 ---KLNYSPIKGKPCRIMWSQRDPAL-------RKKGAGNIFIKNLHPDIDNKALHDTF- 158
Query: 376 SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
SV G + ++ D ++ FV F
Sbjct: 159 SVFGNILSCKIATDETGKSKGFGFVHF 185
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 229 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 43 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 102
Query: 287 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 103 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 161
Query: 344 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEF- 401
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 162 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 220
Query: 402 -----VMVIASSTLF 411
+ IAS LF
Sbjct: 221 TMQAALEAIASMNLF 235
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ + T +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ A I+ N+D + + F
Sbjct: 122 LNYTLIKGRPCRIMWSQ------------RDPALRKTGAGNIFIKNLDAAIDNKALHDTF 169
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D H +++ FV + A+S H +L+ +
Sbjct: 170 -AAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKV 219
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A+ H +L++ +
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 212
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 314
VYV +IDQ T+E+ LF G++ + D S F F+ FT E A AA++
Sbjct: 237 VYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVD 294
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ + T +G +A
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 120
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ A I+ N+D + + F
Sbjct: 121 LNYTLIKGRPCRIMWSQ------------RDPALRKTGAGNIFIKNLDAAIDNKALHDTF 168
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFIHTEFYILH 420
+ G + ++ D H +++ FV + A+S H +L+
Sbjct: 169 -AAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLN 214
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D + E+L A F GCG+V + C + G P +A+IEF
Sbjct: 9 EKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKG---YAYIEFA 65
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+ +AA+ L ++ ++VLP +T
Sbjct: 66 TKGSVQAAVELDQSLFRGRVIKVLPKRT 93
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 64 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 123
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVN-PTFLP 343
R AL+L+ + ++V + I N P P
Sbjct: 124 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISP 160
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTD 305
LA++EEI R+VYV ++D Q T EQL F G G + I D S L +A+IEF
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 306 EEGARAALN-LAGTMLGFYPVRVLPSKTAI 334
E + A++ L G +RV +T +
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNL 108
>gi|449704866|gb|EMD45026.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 414
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAA 312
IR+T++V ++ ++ EEQL LF G++ +I + S + F+ FT++E +
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKG 339
Query: 313 LNLAGTMLGFYPVRVLP 329
LN+ G + +RV P
Sbjct: 340 LNMVGEKVKGRQIRVEP 356
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYG 133
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A ++ ML L +K F+PR E E+E+ +
Sbjct: 134 FVHFETEESANTSIEKVNGML-------LNAKKVFVG---RFIPRKEREKELGEKAKLFT 183
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+Y N ++T +K FE G + R++ + S FV F
Sbjct: 184 NVYVKNFGDELTDESLKEMFEKY-GTITSHRVMIKENKSRGFGFVAF 229
>gi|67477043|ref|XP_654040.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471058|gb|EAL48654.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 414
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAA 312
IR+T++V ++ ++ EEQL LF G++ +I + S + F+ FT++E +
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKG 339
Query: 313 LNLAGTMLGFYPVRVLP 329
LN+ G + +RV P
Sbjct: 340 LNMVGEKVKGRQIRVEP 356
>gi|66819971|ref|XP_643642.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471524|gb|EAL69480.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 299
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 62/150 (41%), Gaps = 25/150 (16%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAALNLAG 317
V+V + VTE L F CG + + +I +P V AFI F DE+G A+ G
Sbjct: 78 VFVGQLPSGVTEYDLKEYFSECGDISNIKILNSNPQRVA--AFITFADEKGRDTAITYNG 135
Query: 318 TML---GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
G + SK + PT TI C NI V + VK FF
Sbjct: 136 KDFNGQGSLRINGANSKPSDGEGEPT--------------TIVCRNIAFTVDETLVKEFF 181
Query: 375 ESVCGEVYRLRLLGDYHHSTRI---AFVEF 401
S CG + R+ L Y S R+ AFV F
Sbjct: 182 -SKCGSISRVSLPV-YEDSGRLKGFAFVSF 209
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGT 318
VYV +D +TE + +LF CG+V+ + D +AF++F D A+ A+ L G
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDNGKSKGYAFVQFADAGAAKLAMELNGV 416
Query: 319 MLGFYPVRV 327
+ P++V
Sbjct: 417 EVAGRPLKV 425
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D T E+L F GCG + + C + G P FA+IEF
Sbjct: 105 EKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKG---FAYIEFA 161
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
D + A+ + ++ ++V P +T ++ T P R M
Sbjct: 162 DMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAM 208
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G +V R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSRGYGFVHF 145
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F + A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETHDAAERAIEKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAREFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N + + +K F S G +R++ D R FV F
Sbjct: 192 NVYIKNFGEDMDDEKLKEIF-SKFGNATSVRVMTDESGGGRGFGFVSF 238
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 311
R+VYV ++D T E+L A F CG+V + C + G P +A+IEF E A+A
Sbjct: 146 RSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKG---YAYIEFAAESSAQA 202
Query: 312 ALNLAGTMLGFYPVRVLPSKT 332
A+ L ++ ++VLP +T
Sbjct: 203 AVALDKSIFRGRVIKVLPKRT 223
>gi|342184931|emb|CCC94413.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 374
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 320 LGFYPVRVLPSKTAIA 335
L ++V SK +
Sbjct: 72 LAGRKIKVGISKGNVG 87
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGA-RAALNLA 316
+Y+ ++ + TEE L F G V + DP + R FAF+ F D E A RA L
Sbjct: 191 IYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEELN 250
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI--YCTNIDKKVTQADV-KLF 373
G LG V V + +FL + +ER + I Y N+D V ++ KLF
Sbjct: 251 GRKLGDKEVYV--GRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKLF 308
Query: 374 FESVCGEVYRLRLLGDYHHSTR 395
G++ +++ D ++R
Sbjct: 309 SALPFGQITSCKVMSDDKGNSR 330
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 39/196 (19%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIR--RTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
R ++ G RR++ +T + E R RT++V I Q+ L + F G VV+ +
Sbjct: 151 RDRRRNGADDRRLSRKTPEPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQ 210
Query: 288 ICGD--PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 345
I D ++EF +EE AL L G L P+ IA + T
Sbjct: 211 IVKDRVTGRSKGVGYVEFKEEESVPKALELTGQKLKGVPI--------IAQL-------T 255
Query: 346 EDEREMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
E E+ AR +Y NI VT+ D++ FE GE+ ++ L D
Sbjct: 256 EAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEPY-GELEQVILQRD 314
Query: 390 YHHSTR---IAFVEFV 402
+ R FV+FV
Sbjct: 315 ELNPGRSKGYGFVQFV 330
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 112 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 159
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 160 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 209
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
+Y+ +ID VTEE+ +F G++ + DP R F F+ ++ E A+AA++
Sbjct: 234 IYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVD 290
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 182
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 183 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFDEMKANFTNIY 235
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID VT+ + + FE GE+ L D +R FV +
Sbjct: 236 IKNIDPDVTEEEFRKIFEQF-GEITSATLSRDPEGKSRGFGFVNY 279
>gi|72388298|ref|XP_844573.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175359|gb|AAX69502.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|62359690|gb|AAX80122.1| hypothetical protein Tb04.30K5.750 [Trypanosoma brucei]
gi|70801106|gb|AAZ11014.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 755
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 306
A+ + I RTV++ + + + +LAAL CG+ + RICG+ + + F+EF D
Sbjct: 98 AEETDAIARTVHLRFLPTGMLQSELAALCAQCGEYLRVRICGNSTNTQNWIYGFVEFADR 157
Query: 307 EGARAALNLAGTML----GFYPVRV 327
GA A + +G L G P+R+
Sbjct: 158 SGAAAMMRQSGLELPNGPGKPPLRL 182
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
E + + V+ I Q TEE LA +F G+V +I D N+ F F+++ +EE A
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAA 82
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A+ + M Y + L + P +M A +Y TN+ K VT+ DV
Sbjct: 83 KAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTEDDV 129
Query: 371 KLFFESVCGEVYRLRLLGD--YHHSTRIAFVEF 401
F S GE+ + +L D +AFV F
Sbjct: 130 HRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRF 161
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF 303
T+ AQ+ ++YV ++D VTE L LF GQV R+C D + L +A++ +
Sbjct: 37 TTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 96
Query: 304 -TDEEGARAALNLAGTMLGFYPVRVL 328
+ E+G +A L T++ P R++
Sbjct: 97 NSSEDGEKALEELNYTVIKGKPCRIM 122
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 24/181 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 RIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYG 179
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + E A A+ ++ G +L V V +P K R EM A
Sbjct: 180 FVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKE-----------RMSKFEEMKANF 228
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFI 412
IY NID VT D + FE G++ + D +R FV ++ A++
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEK-HGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVD 287
Query: 413 H 413
H
Sbjct: 288 H 288
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
T+YV ++D VTEE + ALF G V+ C+I +P + + F+EFTD +
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGND-PYCFVEFTDHQ 49
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 313
++V D+ ++ +QL F G++ DCR+ DP ++ + F+ F TD E A A +
Sbjct: 90 IFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAIATM 149
Query: 314 NLAGTMLGFYPVRV 327
N G LG +R
Sbjct: 150 N--GQWLGSRAIRT 161
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLA 316
+YV ++D Q+++++L F CG + R+ DPN R F F+ F T EE +A +
Sbjct: 280 LYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMN 339
Query: 317 GTMLGFYPVRV 327
G ++ PV V
Sbjct: 340 GKLISGKPVYV 350
>gi|167518059|ref|XP_001743370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778469|gb|EDQ92084.1| predicted protein [Monosiga brevicollis MX1]
Length = 400
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+RRT+YV ++ +E + + CG + RI DP+ RF F+EF E L
Sbjct: 157 MRRTLYVGNLALHTKQEDVVKVMATCGTIKQARIVMDPSRQARFCFVEFAHIEDVATGLT 216
Query: 315 LAGTML 320
L ++L
Sbjct: 217 LNNSLL 222
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFIEFT 304
++ EI R++YV ++D T E+L A F GCG + I C G P FA+IEF
Sbjct: 86 EKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYIEFG 142
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+E AL + T+ ++V P +T
Sbjct: 143 SKEFVETALAMNETLFRGRQIKVNPKRT 170
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 315
++YV D++ V EEQL LF Q+ R+C D S L +A++ F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ P + + +P+ R+ ++ N+D + + F
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSIDNKALHDTF- 143
Query: 376 SVCGEVYRLRL-LGDYHHSTRIAFVEF 401
+ G V ++ L S FV+F
Sbjct: 144 AAFGTVLSCKVALDSSGQSKGYGFVQF 170
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ IR++ V++ ++D + + L F G V+ C++ D + + +
Sbjct: 107 RIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYG 166
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F +EE A+ A+ L G ++ V V F+ R E E+ +
Sbjct: 167 FVQFDNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFTN 215
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N+ + T D+K F G + ++ D + +R FV F
Sbjct: 216 VYVKNLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNF 261
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDE 306
+++ E++ +Y+ ++D ++E+L LF G + C++ D N + + F+ F+
Sbjct: 309 ISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTP 368
Query: 307 EGARAALN-LAGTMLGFYPVRV 327
E A ALN + G ++G P+ V
Sbjct: 369 EEASKALNEMNGKLIGRKPLYV 390
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
Q+ E R+VYV ++D + T +L A F CG++ + C + G P +A+IEF
Sbjct: 145 QKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYIEFA 201
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
E A+A + L ++ ++VLP +T
Sbjct: 202 TESSAQAPVELDNSVFRGPVIKVLPKRT 229
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 246 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEF 303
T + + ++ + +YV I Q TE+++ + F CG + VDC++ + + AFI F
Sbjct: 152 TDNKEEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKVDCKMRPEDGAFSGIAFITF 211
Query: 304 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER----EMCA--RTIY 357
E+GA+ AL +G R L + + P F+PR + EM +Y
Sbjct: 212 ETEDGAKRALAFDRAAMGD---RFLTIQQYVKTTTP-FVPRRKTSSGFAPEMVDGYNRVY 267
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRL---RLLGDYHHSTRIAFVEFVMV 404
N+ T+ D++ F RL + G++ + F + V V
Sbjct: 268 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSV 317
>gi|147845244|emb|CAN83373.1| hypothetical protein VITISV_028295 [Vitis vinifera]
Length = 443
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 244 SRTSLAQR------EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--V 295
S +SL QR ++ R ++V + T E L A F GQ+ DC + D N+
Sbjct: 73 SDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKA 132
Query: 296 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART 355
+ F+ F +GA AL G + +++ +A + P+ P+++D R
Sbjct: 133 KGYGFVLFKTRQGAVKALKQPGKK-----INNRMTQSQLASMGPSPPPQSQDT---VGRK 184
Query: 356 IYCTNIDKKVTQADVKLFF 374
IY +N+ V ++ FF
Sbjct: 185 IYVSNVQADVDPERLRSFF 203
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFIEFT 304
++ EI R++YV ++D T E+L A F GCG + I C G P FA+IEF
Sbjct: 86 EKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYIEFG 142
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+E AL + T+ ++V P +T
Sbjct: 143 SKEFVETALAMNETLFRGRQIKVNPKRT 170
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTD 305
+E RTV+V + ++ ++L F V Q+V RI G V ++EF D
Sbjct: 168 DERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV---GYVEFKD 224
Query: 306 EEGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTI 356
EE + AL L G L P+ V ++ T NP +P +
Sbjct: 225 EETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP---------FHRL 275
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
Y NI VT+ D++ FE GE+ ++L D + +R FV+F
Sbjct: 276 YVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQF 320
>gi|261327760|emb|CBH10737.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 755
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 306
A+ + I RTV++ + + + +LAAL CG+ + RICG+ + + F+EF D
Sbjct: 98 AEETDAIARTVHLRFLPTGMLQSELAALCAQCGEYLRVRICGNSTNTQNWIYGFVEFADR 157
Query: 307 EGARAALNLAGTML----GFYPVRV 327
GA A + +G L G P+R+
Sbjct: 158 SGAAAMMRQSGLELPNGPGKPPLRL 182
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 314
RTV+V + Q+V E+ L G+V + + D N FA++E ++ E L
Sbjct: 8 RTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPKVLL 67
Query: 315 LAGTMLGF--YPVRVLPS---------KTAIAPVNPTFLPRTEDEREMCART------IY 357
L G + F +P+ + S K ++ + P T D M A IY
Sbjct: 68 LNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAASTAPLTADAPGMSASALSAASRIY 127
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEF 401
C N+ +T+ D+++ F+S GEV + + D S +F++F
Sbjct: 128 CGNLHTNITEDDLRIVFQSF-GEVLSVTINRDEMGRSKGFSFIQF 171
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
+ + ++YV D++ V+E QL +F GQVV R+C D L ++++ + + + A
Sbjct: 20 QFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDAT 79
Query: 311 AALNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AL L T + P+R++ F R R+ I+ N+DK +
Sbjct: 80 RALELLNFTGVNGKPIRIM------------FSHRDPSIRKSGTANIFIKNLDKSIDNKA 127
Query: 370 VKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ F + G + ++ D S FV+F
Sbjct: 128 LHDTF-AAFGNILSCKVATDASGQSKGYGFVQF 159
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 310
E + + V+ I Q TEE LA +F G+V +I D N+ F F+++ +EE A
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAA 82
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A+ + M Y + L + P +M A +Y TN+ K VT+ DV
Sbjct: 83 KAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTEDDV 129
Query: 371 KLFFESVCGEVYRLRLLGD--YHHSTRIAFVEF 401
F S GE+ + +L D +AFV F
Sbjct: 130 HRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRF 161
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
++ + RT+YV ++D+QVTE + LF G C++ + + F+EF + A A
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL TM G R++ K VN P + + ++ ++ +V D+K
Sbjct: 69 ALQ---TMNG----RMILGKEVK--VNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLK 119
Query: 372 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 402
F G++ R++ D S FV F+
Sbjct: 120 AAFAPF-GQISDARVVKDLQTNKSKGYGFVSFL 151
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 436 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 495
Query: 316 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 496 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 548
Query: 370 VKLFFESV------CGEVYRLRLLGDYH 391
+ S+ CGE+ R+ + DY
Sbjct: 549 IHQIRNSLEEHFGSCGEITRVSIPKDYE 576
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 134 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 193
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 194 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 253
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 254 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 293
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 111 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 158
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 159 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 208
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VYV +ID +VT+E+ LF G + I D + R F F+ + D E A+ A++
Sbjct: 233 VYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVNYVDHENAQTAVD 289
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFT 304
A +EE+ R+V+V ++D T E++ F CG V I G P FA++EF
Sbjct: 84 AGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKFGQPKG---FAYVEFV 140
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+ E + AL L + L ++VLP +T +
Sbjct: 141 EVEAIQEALQLNESELHGRQLKVLPKRTNV 170
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 111 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 158
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 159 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 208
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VYV +ID +VT+E+ LF G + I D + R F F+ + D + A++A++
Sbjct: 233 VYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQNAQSAVD 289
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 316
+Y+ ++D +TE L F G+++ I D N + + FAF+ + + + A+ A+ +
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMN 252
Query: 317 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
G G Y R ++ F R E + A +Y NID VT +++
Sbjct: 253 GLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 373 FFESVCGEVYRLRLLGD 389
F S CG + ++++ D
Sbjct: 313 LFSS-CGTITSVKVMRD 328
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 250 QREEIIR---RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD 305
++E+I++ +YV +ID VT+++L LF CG + ++ D + + F F+ F++
Sbjct: 284 RKEQILKYQASNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSN 343
Query: 306 -EEGARAALNLAGTMLGFYPVRV 327
EE +A ++ G P+ +
Sbjct: 344 PEEANKAVMSFNGCTFHRKPLYI 366
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + FIEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFI 301
S S +Q+ E ++YV ++D V+E L +F G V R+C D + L +A++
Sbjct: 27 STDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYV 86
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 361
F D E R A+ L + P++ P + + +P+ R+ + I+ N+
Sbjct: 87 NFNDYEAGRQAIE----KLNYTPIKGQPCRIMWSQRDPSL-------RKKGSGNIFIKNL 135
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEF 401
+ + F SV G + ++ D +S FV F
Sbjct: 136 HADIDNKALHDTF-SVFGNILSCKIATDEVTGNSKGFGFVHF 176
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 210
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 124 RIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 183
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 184 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 236
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID++VT + + FE GE+ L D +R FV F
Sbjct: 237 IKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNF 280
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VY+ +IDQ+VT+E+ +F G++ + D R F F+ F+ + A+AA++
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
EF + A+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDVAVAMDETVFRGRTIKVLPKRTNMPGISTT 178
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++ E ++VYV ++D T E++ F GCG V I D S FA++EFT+++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFTEKD 130
Query: 308 GARAALNLAGTMLGFYPVRV 327
G + AL + ++L ++V
Sbjct: 131 GMQNALAMTDSLLRGRQIKV 150
>gi|71749032|ref|XP_827855.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833239|gb|EAN78743.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261333587|emb|CBH16582.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 377
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 260 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 319
Y+ +ID+ VT E L +F CG +VDC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 320 LGFYPVRV 327
L ++V
Sbjct: 72 LAGRKIKV 79
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 146 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 205
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 206 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 265
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 266 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 305
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + +S FV + A++ H +L++ +
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 210
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 124 RIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 183
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 184 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 236
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID++VT + + FE GE+ L D +R FV F
Sbjct: 237 IKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNF 280
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
VY+ +IDQ+VT+E+ +F G++ + D R F F+ F+ + A+AA++
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 315
++YV D++ V EEQL LF Q+ R+C D S L +A++ F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 316 AG-TMLGFYPVRVL 328
T L P+R++
Sbjct: 96 LNFTPLNGKPIRIM 109
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ IR++ V++ ++D + + L F G V+ C++ D + + +
Sbjct: 107 RIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYG 166
Query: 300 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 355
F++F +EE A+ A+ L G ++ V V F+ R E E+ +
Sbjct: 167 FVQFDNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFTN 215
Query: 356 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N+ + T D+K F G + ++ D + +R FV F
Sbjct: 216 VYVKNLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNF 261
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDE 306
+++ E++ +Y+ ++D ++E+L LF G + C++ D N + + F+ F+
Sbjct: 309 ISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTP 368
Query: 307 EGARAALN-LAGTMLGFYPVRV 327
E A ALN + G ++G P+ V
Sbjct: 369 EEASKALNEMNGKLIGRKPLYV 390
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 61 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPS 120
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
R AL+L+ + ++V + I N
Sbjct: 121 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN 151
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 435
Query: 316 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 372
G L VR + + A P N + R +T++ DK + + +++
Sbjct: 436 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQS-QTVFVRGFDKNLGEDEIRAK 494
Query: 373 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEF 401
F CGE R+ + D+ +S A+++F
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 528
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 244 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFI 301
S S +++EI R+V+V ++D T E+L A F GCG + I D + + FA+I
Sbjct: 40 SPPSTEEQKEIDARSVFVGNVDFGSTIEELEAHFKGCGTITRTTIPKDKYTQRQKNFAYI 99
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF D++ AL + TM + V +T +
Sbjct: 100 EFEDKDSVEMALVMHETMFRDRRIVVTAKRTNV 132
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 316
TV++S++ + +E+ + + G + D R+ D + F F+EF+ ++ ARA L
Sbjct: 603 TVFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLKRD 662
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
++ PV + PS+ A +P F ++ E+ + ++ + T+ D++ F+
Sbjct: 663 RELMKGRPVFMSPSEPDAALKHPAFKYQSTLEK----KKLFIKGLALSTTKEDLEALFKK 718
Query: 377 VCGEVYRLRLLGDYHHSTR-IAFVEF 401
G + +RL+ + S + +A+VEF
Sbjct: 719 F-GILKDVRLVTFRNGSPKGLAYVEF 743
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 423
Query: 316 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 372
G L VR + + A P N + R +T++ DK + + +++
Sbjct: 424 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQS-QTVFVRGFDKNLGEDEIRAK 482
Query: 373 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEF 401
F CGE R+ + D+ +S A+++F
Sbjct: 483 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 516
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ T L Q+ E+ ++ +YV ++D+ VT+++L F G + C
Sbjct: 291 GKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSC 350
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 327
++ DP V R + F+ F T EE +RA + G M+ P+ V
Sbjct: 351 KVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYV 393
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
++YV D+D VT+ QL F GQVV R+C D + L + ++ + + A ALN
Sbjct: 40 SLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 98
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A++ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAID----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAAL-N 314
++YV ++D V+E L +F G V R+C D N+ L +A++ F D E R A+
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ + IY N+ + + F
Sbjct: 99 LNYTLIKGKPCRIMWSQ------------RDPSLRKKGSGNIYIKNLHPAIDNKSLHETF 146
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
S G + ++ D + +R FV F
Sbjct: 147 -STFGNILSCKVATDDNGVSRGFGFVHF 173
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 245 RTSLAQREEIIRR----TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+ +Y+ ++ + + L F G ++ C++ D N V R F
Sbjct: 110 RIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDDNGVSRGFG 169
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F+ F +E AR A+ ML + + + + R E+ A+ IY
Sbjct: 170 FVHFENESDARDAIEAVNGML-------MNDQEVYVAWHVSKKDRQSKLEEVKAKFTNIY 222
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NID + +Q + + F S G++ L D R F+ F
Sbjct: 223 VKNIDLETSQEEFEQLF-SKYGKITSAVLEKDSEGKLRGFGFINF 266
>gi|281340677|gb|EFB16261.1| hypothetical protein PANDA_006204 [Ailuropoda melanoleuca]
Length = 196
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE+ L F G V+ RIC D L +A++ F A+ AL+
Sbjct: 3 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 62
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 63 MNFDMIKGKPIRLMWSQ------------RDAYLRKSGIGNVFIKNLDKSI---DNKTLY 107
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
E S G++ +++ D S AFV F
Sbjct: 108 EHFSAFGKILSSKVMSDDQGSRGYAFVHF 136
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
E+ ++YV D+ V E+ L LF G VV R+C D L +A++ F + E A
Sbjct: 172 ELPNVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYVNFQNPEDAE 231
Query: 311 AALNLAGTMLGFY--------PVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID 362
A+++ L FY P+R++ ++ +P+ +R I+ N+D
Sbjct: 232 RAIDV----LQFYEGPLTKNKPIRIMWKRS-----DPS-------QRRNPEGNIFIKNLD 275
Query: 363 KKVTQADVKLFFE--SVCGEVYRLRL-LGDYHHSTRIAFVEF 401
K + D K ++ S G+V +L D +S AFV +
Sbjct: 276 KSI---DNKALYDTFSTFGKVLSCKLATDDKGNSLGYAFVHY 314
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEG 308
++ +I + +YVS++ +TE+ L LF G++ R+ PN + AF+E+ E+
Sbjct: 775 KKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVVRMPNGNSKGIAFVEYNQEDH 834
Query: 309 ARAALNLAGTML 320
A+ A+ L GTM+
Sbjct: 835 AKEAMTLNGTMV 846
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
TV+VS++D V+EEQ+ F CG V R+ D + FA++EF ++E + AL L
Sbjct: 652 TVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKESVKTALTL 710
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 231 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-- 288
R++S G R + T L+ EE RTV+ + Q+V L F G+V D R+
Sbjct: 215 RRRSPANGAER-TTPTELSP-EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLIT 272
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRT 345
C A+IEF D E AL L+G L P+ V + K + P F P++
Sbjct: 273 CNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS 332
Query: 346 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 333 ----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMD 371
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 56/251 (22%)
Query: 215 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 274
+H A N NV+ + GQ R N + A + ++YV D+ Q VTE L
Sbjct: 45 DHTAGNANVSGGVSGTTTAPAGQ---RPNGGMN-AGAANFVSPSLYVGDLHQDVTEAMLF 100
Query: 275 ALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSK 331
+F G V R+C D + L +A++ + + A +L+ L T++ P R++
Sbjct: 101 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 157
Query: 332 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRL-LG 388
+ R R+ I+ N+DK + D K ++ S+ G + ++ +
Sbjct: 158 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 205
Query: 389 DYHHSTRIAFVEFV--------------MVIASSTLFI----------------HTEFYI 418
D HS FV + M+I T+++ +T YI
Sbjct: 206 DNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAERDNLAEAKYTNVYI 265
Query: 419 LHNPSIAWLEE 429
+ PS AW +E
Sbjct: 266 KNMPS-AWEDE 275
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 116 RIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYG 175
Query: 300 FIEFTDEEGARAALNLAGTML--------GFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
F+ + E A A+ ML G + R S+ R EM
Sbjct: 176 FVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE-----------RQSKLEEM 224
Query: 352 CAR--TIYCTNIDKKVTQAD-VKLF 373
A+ IY N+D +VTQ D VKLF
Sbjct: 225 KAQFTNIYVKNLDPEVTQDDFVKLF 249
>gi|392574568|gb|EIW67704.1| hypothetical protein TREMEDRAFT_69686 [Tremella mesenterica DSM 1558]
Length = 1138
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 10/184 (5%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDE 306
A+R + + T++V + + T + LF G V + D + FAF+E E
Sbjct: 836 ARRSDTSKTTLFVGGLTAKSTAPDVEKLFSQRGAVQHVNLGWDQAKQICKGFAFVEMATE 895
Query: 307 EGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
A+ ALNL G+ + G Y + + T PR ER ART+ +N+
Sbjct: 896 ADAQEALNLHGSHINGRYLKVEMHDPNHVTKKRTTSAPREAIERR--ARTVRLSNLPSDT 953
Query: 366 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSIA 425
+ ++ E + V RL L H A VE + + L + +E +I +I
Sbjct: 954 QEGLLQQALEKIVS-VKRLELFSKVHQ----AVVELESQVDAGLLLLQSEPFIFGGATIE 1008
Query: 426 WLEE 429
EE
Sbjct: 1009 IREE 1012
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 45.8 bits (107), Expect = 0.045, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFT 304
A +EE R+VYV ++D T E+L F CG V I G+P FA+IEF
Sbjct: 42 AAKEEADSRSVYVGNVDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKG---FAYIEFL 98
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
+ + A L G+ L ++V P +T +
Sbjct: 99 EADAVTNACLLDGSELRNRAIKVSPKRTNV 128
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 7/153 (4%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEGARAA 312
+RT++V I Q+ L F G V++ +I D LR ++EF DEE A
Sbjct: 176 KRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKD-RVTLRSKGVGYVEFKDEESVAKA 234
Query: 313 LNLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L L G L P+ L P+ +Y NI VT+ D++
Sbjct: 235 LELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEGDLR 294
Query: 372 LFFE--SVCGEVYRLRLLGDYHHSTRIAFVEFV 402
FE +V R + S FV+FV
Sbjct: 295 DIFEPFGALEQVILQRDEANPGRSKGYGFVQFV 327
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--- 288
+K G + N+ S A +EEI R+V+V ++D T E++ F CG V I
Sbjct: 42 EKEMGSAQDPANASASQANKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD 101
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
G P +A++EF + E + AL L + L ++V +T I P + PR
Sbjct: 102 KFGQPKG---YAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNI-PGMKQYRPR 154
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 233 KSFGQGKR-----RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
K FG+ R R NS EE RTV+V + Q++ L F G+V D R
Sbjct: 135 KPFGRRNRSPLGLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVR 194
Query: 288 --ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
+C A+IEF D E AL L+G L P+ V
Sbjct: 195 LIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIV 236
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
RT++V ++ +++EEQL F CG +++ R+ DP + F ++ F ++ G + AL
Sbjct: 183 RTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNALE 242
Query: 315 LAGTMLGFYPVRV 327
GT L +RV
Sbjct: 243 KNGTKLLEREIRV 255
>gi|125562739|gb|EAZ08119.1| hypothetical protein OsI_30382 [Oryza sativa Indica Group]
Length = 219
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD---PNSVLRFA 299
+++ + A E+ ++RT+Y+ + QVT L A C VVD + P + A
Sbjct: 17 DAKKAYADFEKKVKRTIYIDHLSPQVTSSVLKAALAQCANVVDVEFIVNYTIPYDIPSAA 76
Query: 300 FIEFTDEEGARAALNL 315
+E DE A+AAL+L
Sbjct: 77 LVELDDEIQAKAALDL 92
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ +V+E L F G ++ R+C D L +A++ F A AL
Sbjct: 12 SLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALET 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K F
Sbjct: 72 MNFDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALF 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D H S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDEHGSKGYGFVHF 145
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 22 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 81
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVN-PTFLP 343
R AL+L+ + ++V + I N P P
Sbjct: 82 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISP 118
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++D + + L F G ++ C++ D N + +
Sbjct: 140 RIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGNSKGYG 199
Query: 300 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 200 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANY 248
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y NI+ +VT+ + + FF S GE+ L D R FV +
Sbjct: 249 TNVYIKNINLEVTEEEFREFF-SKWGEITSSTLARDAEGKPRGFGFVNY 296
>gi|15226817|ref|NP_181639.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|145331087|ref|NP_001078035.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16612302|gb|AAL27512.1|AF439844_1 At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|3402711|gb|AAD12005.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22137136|gb|AAM91413.1| At2g41060/T3K9.17 [Arabidopsis thaliana]
gi|110742573|dbj|BAE99200.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254826|gb|AEC09920.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330254827|gb|AEC09921.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 451
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 9/168 (5%)
Query: 240 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-- 297
R + +R + E+++ R ++V + + L F G++ DC+ D S
Sbjct: 111 RDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKG 170
Query: 298 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTA-IAPV--NPTFLPRTEDEREMCAR 354
+ FI F GAR AL +G R+ + A I PV NP P E R
Sbjct: 171 YGFILFKSRSGARNALKQPQKKIG---TRMTACQLASIGPVQGNPVVAPAQHFNPENVQR 227
Query: 355 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 402
IY +N+ + + FF S GE+ L D F FV
Sbjct: 228 KIYVSNVSADIDPQKLLEFF-SRFGEIEEGPLGLDKATGRPKGFALFV 274
>gi|358334696|dbj|GAA40294.2| poly(U)-binding-splicing factor PUF60, partial [Clonorchis
sinensis]
Length = 519
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 231 RKKSFGQGKRRMNSRTSLAQ--REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 288
R+ G+ N+ T +A+ E + +YVS I +TE+ ++ +F G++V CR+
Sbjct: 168 RQLKVGRPSNLTNADTVIAELVAEYKLENRIYVSGIHVDLTEDDISLVFEAFGKIVFCRL 227
Query: 289 CGDPNSVLR---FAFIEFTDEEGARAAL------NLAGTML 320
DP S R F +IE+ + + A A+ NL G +L
Sbjct: 228 VVDPESTERHRGFGYIEYQNSQSAADAVASMNQFNLGGQLL 268
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ +VTE L F G V+ R+C D S L +A++ + A+ AL
Sbjct: 9 SLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALE- 67
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F + P + A NP R A I+ N++K++ D K ++
Sbjct: 68 ---ELNFEKIHDKPCRIMWAQRNPA-------ARRSGAGNIFIKNLNKEI---DNKALYD 114
Query: 376 --SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
S G + ++ D +R FV F
Sbjct: 115 TFSAFGTILSCKVAADEKGESRGYGFVHF 143
>gi|67539668|ref|XP_663608.1| hypothetical protein AN6004.2 [Aspergillus nidulans FGSC A4]
gi|40738563|gb|EAA57753.1| hypothetical protein AN6004.2 [Aspergillus nidulans FGSC A4]
gi|259479813|tpe|CBF70379.1| TPA: actin cytoskeleton protein (VIP1), putative (AFU_orthologue;
AFUA_2G10030) [Aspergillus nidulans FGSC A4]
Length = 270
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC---GDPNSVLRFAFIEFTDEEGARAA 312
R TV+VS+ID +E+++ F CG++V + G+P S L+ A + F + A+ A
Sbjct: 4 RTTVHVSNIDPSTSEKEVQDFFSFCGKIVSISVTPTSGEPGS-LKSATVTFEKDAAAKTA 62
Query: 313 LNLAGTMLGFYPVRVLPSKT 332
L L T LG V V ++T
Sbjct: 63 LLLDQTQLGPSVVTVKAAQT 82
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 240 RRMNSRTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV 295
R R +QR+ +RRT +++ ++D + + L F G ++ C++ +
Sbjct: 113 RNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESGS 172
Query: 296 LRFAFIEFTDEEGARAALNLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
L + F+ + E A AA+ ML Y +P K A + +E
Sbjct: 173 LGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKI---------EESRA 223
Query: 352 CARTIYCTNIDKKVTQADVKLFF 374
+YC N+D VT + + F
Sbjct: 224 RFTNVYCKNVDADVTDEEFEKLF 246
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++EEI R+++V ++D E+L +LF CG + I + N+ +A+IEF D
Sbjct: 59 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPS 118
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
R AL+L+ + ++V + I N
Sbjct: 119 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN 149
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 27/157 (17%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAAL-NL 315
V+V D+ +V +E L F G + D R+ D NS + F+ F D+ A A+ +
Sbjct: 109 VFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 316 AGTMLGFYPVRV---------LPSKT----------AIAPVN----PTFLPRTEDEREMC 352
G LG +RV PS T A AP+N P +
Sbjct: 169 NGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAY 228
Query: 353 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
T+Y N+ TQAD+ F+S+ G + +R+ D
Sbjct: 229 NTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD 264
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 259 VYVSDIDQQVTEEQLAALF-VGCGQVVDCRIC-----GDPNSVLRFAFIEFTDEEGARAA 312
+YV ++D++VT+ + + G + + + GD N+ + F++F D A +
Sbjct: 14 LYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDNISAMQS 73
Query: 313 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
+N L G V+V A +P +P+ + +IYC N+D + + D+K
Sbjct: 74 MNFLNGREFCGKKVKV-----NWATNSPNGMPKVIG----TSVSIYCGNLDDTIDEEDLK 124
Query: 372 LFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 402
FE V GE+ ++++ D +HS IAF+ F
Sbjct: 125 AAFE-VFGEILNIKVVRDPVTNHSKNIAFISFT 156
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAAL-N 314
++Y ++D + EE L A F G++++ ++ DP N AFI FT++ A A+
Sbjct: 108 SIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIRE 167
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR----TIYCTNIDKKVTQADV 370
+ G ML R + + A N + DE A T+Y I T+ +
Sbjct: 168 MHGAML---KTRAIKTNWATRNQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEEQI 224
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ F+ G++ +R+ ++ AF++F
Sbjct: 225 RSHFDDY-GKIVDVRIFAAKNY----AFIKF 250
>gi|413951767|gb|AFW84416.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 167
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 314
RTV++ ++D++V+E L + + G VVD + D NS+ +AF+E+ EE A+ A+
Sbjct: 7 RTVFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVK 66
Query: 315 L 315
L
Sbjct: 67 L 67
>gi|6102944|emb|CAB59276.1| hypothetical protein [Homo sapiens]
Length = 367
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAA 312
++ +YV D+D VTE+ L F G + RIC DP S L + ++ F A A
Sbjct: 1 LKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWA 60
Query: 313 LNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
LN ++ P R++ S+ + R+ I+ N+DK + +
Sbjct: 61 LNTMNFDLINGKPFRLMWSQP------------DDRLRKSGVGNIFIKNLDKSIDNRALF 108
Query: 372 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
F S G + +++ D + S A+V F + A++ H L+N +
Sbjct: 109 YLF-SAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQV 160
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L LF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 312 AL 313
AL
Sbjct: 62 AL 63
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ E L F G++ +CRI DP ++ +AF+ F + A A+ +
Sbjct: 98 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAM 157
Query: 316 AGTMLGFYPVRV-------LPSKTAIA---PVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
G LG +R P KT A PTF ++ T+YC +
Sbjct: 158 NGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTF-DEVYNQSSPTNCTVYCGGFTTGL 216
Query: 366 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
T+ ++ F S G + +R+ D + AF++F S+T I T +HN I
Sbjct: 217 TEDLMQKTF-SQFGVIQDIRVFKDKGY----AFIKFA-TKESATHAIET----IHNTEI 265
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 245 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV------VDCRICGDPNSVLRF 298
RT+ ++++ RR+VYV +++ T + L F CGQ+ VD + G P +
Sbjct: 29 RTNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVD-KWTGHPKG---Y 84
Query: 299 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
A+IEF EE AL L T+ ++V + I
Sbjct: 85 AYIEFAQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|356576979|ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 248
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
+T+YV ++ +V + + LF CG++VD R+ + N L F +EF E A+ AL L
Sbjct: 62 KTIYVRNLSYRVEQADMENLFKECGKIVDVRLHRNHNGRLNGFGQVEFATAEAAKKALEL 121
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCAR----TIYCTNIDKKVTQADV 370
T L P+ V A T+ + + C R T++ T D + +
Sbjct: 122 HNTELLRRPIGV---DLAEEKGEYTYSRSNWSNSFQKCERAQSPTVFVTGFDSSLPAEKL 178
Query: 371 KLFFE---SVCGEVYRLRL 386
K E CGE+ R+ +
Sbjct: 179 KASLEEHFGSCGEIQRISI 197
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 241 RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAAL----FVGCGQVVDCRICGDPNS-- 294
R N S + E TV+V+ D + E+L A F CG++ I P+S
Sbjct: 146 RSNWSNSFQKCERAQSPTVFVTGFDSSLPAEKLKASLEEHFGSCGEIQRISIPTFPDSGA 205
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 337
V FA + F D R AL+L LG +P+R + I V
Sbjct: 206 VKGFAHLGFKDVVSVRKALHLDQNELGGFPLRAVAEMDVITGV 248
>gi|30687254|ref|NP_189032.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|334185580|ref|NP_001189958.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643307|gb|AEE76828.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643309|gb|AEE76830.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 987
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+++ + VS++ +T EQL LF CG VVDC I A+IE+++ E A AAL
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSIT----DSKHIAYIEYSNSEEATAALA 404
Query: 315 LAGTML 320
L T +
Sbjct: 405 LNNTEV 410
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 218 ARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQ---REEIIRRTVYVSDIDQQVTEEQLA 274
AR + A A R++ G+G+ RT A RE+ R+VYV +D T E+L
Sbjct: 38 ARLAQMEAEANKLREQQ-GKGEDSTLGRTDGADAALREDADNRSVYVGQVDYACTPEELQ 96
Query: 275 ALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 330
F CG V I G+P +A+IEF + + AL L + L ++VLP
Sbjct: 97 MHFQSCGTVNRVTILTDKFGNPKG---YAYIEFLETDAVANALLLDSSELRGRELKVLPK 153
Query: 331 KTAI 334
+T +
Sbjct: 154 RTNV 157
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D T E+L + F CG++ + C + G P +A+IEF
Sbjct: 149 EKMEADNRSVYVGNVDYGGTAEELESHFNSCGEINRVTILCDKFSGHPKG---YAYIEFA 205
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
E +AA++L + ++VLP +T + ++ T
Sbjct: 206 SESSVKAAVDLDESTFRGRIIKVLPKRTNMPGISST 241
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + FIEF E+ A A+ +
Sbjct: 26 TAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEDDADYAIKI 85
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
M+ Y P+RV +K ++D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFVGNLDPDV---DEKL 127
Query: 373 FFES 376
+++
Sbjct: 128 LYDT 131
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 234 SFGQGKRRMNSRTSLAQREEII-----RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 288
+FG G +N R A RE + T +V ++ + T + LF GCG V + RI
Sbjct: 46 AFGNG---LNDRGGYATREPLPLPTQPPYTAHVGNLSFEATSADINDLFAGCG-VTNVRI 101
Query: 289 CGDP--NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
D S F ++EF +G R AL+L+GT L +RV
Sbjct: 102 VEDKLTRSPKGFGYVEFETVDGLRRALDLSGTTLQGRAIRV 142
>gi|196016887|ref|XP_002118293.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
gi|190579124|gb|EDV19227.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
Length = 930
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 218 ARNGNVNANAAVRRKKSFGQGKRR-----MNSRTSLA------QREEIIRRT-VYVSDID 265
A ++A+A R K+ F R+ SRT + +RE +T V++S++
Sbjct: 630 AERNQIDADAPSREKRKFDFDSRKESGITKKSRTDGSLNNPSRERERYNEKTSVFISNVP 689
Query: 266 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGTMLGFYP 324
E+ + + F CG V D R+ PN + + ++EF DE + AL L + P
Sbjct: 690 FSAVEDDIRSFFSTCGNVKDVRLVRAPNGKFKGYGYVEFEDELVTQEALKLDRNTIAGRP 749
Query: 325 VRV 327
V V
Sbjct: 750 VYV 752
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 25 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 84
Query: 314 NLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
L+G +L PV V PS K + + R +Y N+ +T+A++
Sbjct: 85 ALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYGAVDRKLYVGNLHFNMTEANL 144
Query: 371 KLFFESVCG-EVYRLRLLGDYHHSTRIAFVEF 401
+ FE EV +L L + H FV+F
Sbjct: 145 REIFEPFGQIEVVQLPLDMETGHCKGFGFVQF 176
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T +E +RA + +
Sbjct: 235 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 294
Query: 317 GTMLGFYP----------------------VRVLPSKTAIAPVNPTFLP 343
G M+ P +R +P ++AP P + P
Sbjct: 295 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 343
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-- 289
+K G + + S A +EE R+V+V ++D T E++ F CG V I
Sbjct: 61 EKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 120
Query: 290 --GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
G P FA++EF + E + AL L + L ++VLP +T +
Sbjct: 121 KFGQPKG---FAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNV 164
>gi|9294658|dbj|BAB03007.1| unnamed protein product [Arabidopsis thaliana]
Length = 1006
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+++ + VS++ +T EQL LF CG VVDC I A+IE+++ E A AAL
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSIT----DSKHIAYIEYSNSEEATAALA 404
Query: 315 LAGT 318
L T
Sbjct: 405 LNNT 408
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 67 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 126
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+M ++ N+D + + F
Sbjct: 127 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 174
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
S G++ ++ D ++ FV F V +++ H +L++ +
Sbjct: 175 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKV 224
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 236 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 286
G+ +++ T L Q+ E+ ++ +YV ++D+ VT+++L F G + C
Sbjct: 297 GKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSC 356
Query: 287 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 327
++ DP+ V R + F+ F T EE RA + G M+ P+ V
Sbjct: 357 KVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYV 399
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 314
++YV D+D VT+ QL F GQVV R+C D + L + ++ + + A ALN
Sbjct: 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 104
>gi|403368470|gb|EJY84070.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 804
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 24/184 (13%)
Query: 257 RTVYVSDIDQQVTEEQLAALF--VGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAA 312
RT++V +++ EEQL +F G+++ C+I + + L + F+E +E A A
Sbjct: 587 RTIFVKNLNFSTVEEQLEQVFKEAKVGKILSCKIVKNNENQLSRGYGFVELESKEMAEKA 646
Query: 313 L-NLAGTMLGFYPVRVLPSKTAIAPV-------------NPTFLPRTEDEREMCARTIYC 358
+ L +L + +++ SK + T L + E + ++ + +
Sbjct: 647 IKKLQNFILDEHALKLSISKKDVTKAEKKSNDDQLGKRKEKTELSKVEAQEDLQSNKLLV 706
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFVMVIASSTLFI---H 413
N+ + T +D+K F++ G + + RL + + FVEFV + F H
Sbjct: 707 KNLAFEATDSDIKELFKTY-GALKKCRLPKKINSKSHRGFGFVEFVSSEEAKNAFKMLQH 765
Query: 414 TEFY 417
T Y
Sbjct: 766 THLY 769
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 305
+E +T+YV ++D VTEE L ALF G+V C+I +P + +AF+EFT+
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGND-PYAFLEFTN 55
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ L F G++ +CRI DP ++ +AF+ F + A AA+ +
Sbjct: 98 IFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 157
Query: 316 AGTMLGF------YPVRVLPSKTA--IAPVN-----PTFLPRTEDEREMCARTIYCTNID 362
G LG + R P+K AP + PTF ++ T+YC
Sbjct: 158 NGQWLGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFD-EVYNQSSPTNTTVYCGGFT 216
Query: 363 KKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMVIASS 408
V ++ S G++ +R+ D + AF+ F A++
Sbjct: 217 SNVITEELMQSTFSQFGQIQDVRVFRDKGY----AFIRFTTKEAAA 258
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAA 312
T+YV +DQ+VT+E L LF CG V++ +I G+ + F+E+ EE A A
Sbjct: 13 TLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQG---YGFVEYKTEEDADYA 69
Query: 313 LNLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQAD 369
+ + ++ Y P++V + ++D+R + I+ N+D VT+
Sbjct: 70 IKIL-HLIKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDPSVTEMQ 114
Query: 370 VKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEF 401
++ F S G + R++ D + S AF+ +
Sbjct: 115 LQETF-STFGLIIGRRIVRDSDNNQSKGYAFISY 147
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 309
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 204 DERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEESV 263
Query: 310 RAALNLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 358
AAL L G L PV +V + A + N T +P +Y
Sbjct: 264 TAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVP---------FHRLYV 314
Query: 359 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NI +T++D++ FE GE+ ++L D +R FV+F
Sbjct: 315 GNIHFSITESDLRNVFEPF-GELEFVQLQKDDTGRSRGYGFVQF 357
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 233 KSFGQGKR-----RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
K FG+ R R NS EE RTV+V + Q++ L F G+V D R
Sbjct: 114 KPFGRRNRSPLGLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVR 173
Query: 288 --ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 327
+C A+IEF D E AL L+G L P+ V
Sbjct: 174 LIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIV 215
>gi|79313347|ref|NP_001030753.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643308|gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 934
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+++ + VS++ +T EQL LF CG VVDC I A+IE+++ E A AAL
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSIT----DSKHIAYIEYSNSEEATAALA 404
Query: 315 LAGT 318
L T
Sbjct: 405 LNNT 408
>gi|225708572|gb|ACO10132.1| RNA-binding protein 7 [Osmerus mordax]
Length = 266
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V ++DQ+VTEE L LF+ G ++ +I D + + F F F EE A +NL
Sbjct: 9 RTLFVGNLDQKVTEELLFELFLQAGPLIKVKIPKDNDGKQKSFGFAVFKHEESAPYGMNL 68
Query: 316 A-GTML 320
GT L
Sbjct: 69 LNGTSL 74
>gi|115477960|ref|NP_001062575.1| Os09g0111800 [Oryza sativa Japonica Group]
gi|113630808|dbj|BAF24489.1| Os09g0111800 [Oryza sativa Japonica Group]
gi|125604719|gb|EAZ43755.1| hypothetical protein OsJ_28377 [Oryza sativa Japonica Group]
gi|215686343|dbj|BAG87604.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697394|dbj|BAG91388.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 214
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD---PNSVLRFA 299
+++ + A E+ ++RT+Y+ + QVT L A C VVD + P + A
Sbjct: 17 DAKKAYADFEKKVKRTIYIDHLSPQVTSSVLKAALAQCANVVDVEFIVNYTIPYDIPSAA 76
Query: 300 FIEFTDEEGARAALNL 315
+E DE A+AAL+L
Sbjct: 77 LVELDDEIQAKAALDL 92
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFI 301
S+ +R+EI +++YV ++D T +LA F CG V + ++ G P FA++
Sbjct: 78 SIEERQEIDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKG---FAYV 134
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 342
EF+D +L L + ++V+P +T + P+F+
Sbjct: 135 EFSDPSSVSESLVLNDSEFHGRNLKVVPKRTNM----PSFM 171
>gi|83317372|ref|XP_731133.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23491071|gb|EAA22698.1| splicing factor, arginine/serine-rich 12 [Plasmodium yoelii yoelii]
Length = 501
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
++ + +Y+ +I ++ TE + F G+ + + + ++EF +EE A+AA
Sbjct: 48 DVFSKIIYMENIPEKYTENDVVEFFKNVGKTTNYKFLYNEQINKHTVYVEFINEENAKAA 107
Query: 313 LNLAGTML 320
LNL GT +
Sbjct: 108 LNLNGTKI 115
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T+YV +D++VT+ L LFV G VV + D +S F FIEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
M+ Y P++V + + E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 373 FFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMVIASST 409
F++ V +V ++ + +S AFV F AS +
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDS 157
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFIEFT 304
++ E+ R++YV ++D T E+L A F GCG + I C G P FA+IEF
Sbjct: 86 EKAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKG---FAYIEFG 142
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+E AL + T+ ++V P +T
Sbjct: 143 SKEFVETALAMNETLFRGRQIKVNPKRT 170
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 306
+E RRTV+V + ++ ++L A F G Q+V R+ G V ++EF +E
Sbjct: 172 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 228
Query: 307 EGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 364
E AA+ L G L P+ ++ ++ NP T + ++ +Y NI
Sbjct: 229 ESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHFS 286
Query: 365 VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+T+AD++ FE GE+ ++L + +R FV+F
Sbjct: 287 ITEADLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQF 323
>gi|429962103|gb|ELA41647.1| hypothetical protein VICG_01280 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 309
+E +RTV++ DI + E+ L G+V+ I D FA++EF A
Sbjct: 89 DEETQRTVFIKDIGYDLREDDLRQQMQRLGEVIRVTIPMTHDLRRNKGFAYVEFKRLADA 148
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
+ AL L GT L L K A+ F + + R++ T++ N+ T+++
Sbjct: 149 QKALKLDGTEL-------LGRKVAV------FQAKPRENRKIY--TLFVKNLSYTTTKSE 193
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTR---IAFVEFV 402
+K +FE G++Y + L D ++ R F+E+
Sbjct: 194 LKEYFERF-GKIYNISLPVDNENTERNKGFCFIEYT 228
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 294
F RR N R+ + + V ++ ++ E+ L+ LF G V R+ PN
Sbjct: 91 FLDNDRRTNERS---------KNIILVKNLPFKIQEDGLSELFERFGFVT--RLLISPNR 139
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM--- 351
+ ++F EE A+ A L ++ ++ P AP+ E +++
Sbjct: 140 SI--GIVQFESEEHAQNAFE----KLSYFSLKNCPLYLEWAPIGLLKTEEVEKHQKIQEE 193
Query: 352 ----CARTIYCTNIDKKVTQADVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEF 401
AR +Y N+D V + ++K FFE GE+ ++++ ++S FVE+
Sbjct: 194 IDDELARVVYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNNSQGYGFVEY 248
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI----CGDP 292
Q + N T +EEI R++YV ++D E+L F G ++ I G+P
Sbjct: 12 QSEIERNLSTVAENQEEIDSRSIYVGNVDYGSVAEELENHFKQAGDIIRITIKSDKMGNP 71
Query: 293 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
FA+IEF D+ AL L G+ ++V +T I ++ T
Sbjct: 72 KG---FAYIEFKDKSSVENALQLNGSTFRNRELKVFAKRTNIPGLSTT 116
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE L F+ G ++ R+C D + LR+A+I F A AL+
Sbjct: 12 SLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D H S FV F
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHF 145
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 301 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 360
+ F E A+ A++ ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAISTMNGML------LNDRKVFVG----HFKSRREREAELRARAMEFTN 192
Query: 361 IDKKVTQADV------KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
I K Q D+ LF S G++ ++++ D + HS FV F
Sbjct: 193 IYVKNLQVDMDEQGLQDLF--SQFGKLLSVKVMKDNNGHSRGFGFVNF 238
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 161 DFKRDMRE--LQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNA 218
+ + DM E LQ+LFS+ + S+ +NN GF F N F H
Sbjct: 197 NLQVDMDEQGLQDLFSQFGKLL------SVKVMKDNNGHSRGFG---FVN----FEKHEE 243
Query: 219 RNGNV---NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQ 266
V N R+ G+ ++R+ + L ++ E +++ +YV ++D
Sbjct: 244 AQKAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDD 303
Query: 267 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPV 325
+ +E+L F G + ++ + F F+ F+ EE +A + G ++G P+
Sbjct: 304 SIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPL 363
Query: 326 RV 327
V
Sbjct: 364 YV 365
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
+E +T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 312 ALN 314
AL
Sbjct: 61 ALT 63
>gi|154339694|ref|XP_001565804.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063122|emb|CAM45321.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 493
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
RT+Y+S + + + L L G V RIC FAF+E EGA A+ +
Sbjct: 379 RTIYISHLPGLLPQSMLLELLTAAGPVNKVRICTGAGYSTLFAFVEMRTAEGAHRAMCMN 438
Query: 317 GTMLGFYPVRVLPSKTAI 334
G L Y +RV ++ A+
Sbjct: 439 GLQLMGYTIRVETARNAV 456
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 81 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 140
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+M ++ N+D + + F
Sbjct: 141 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 188
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
S G++ ++ D ++ FV F V +++ H +L++ +
Sbjct: 189 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKV 238
>gi|423076693|ref|ZP_17065401.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
gi|361852256|gb|EHL04522.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
Length = 112
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T+YV ++ T E L + F GQV+ RI D + F F+E DE+ AR A +L
Sbjct: 32 TLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDAARMAEDL 91
Query: 316 AGTMLGFYPVRV 327
G G P+ V
Sbjct: 92 NGKDFGGRPLTV 103
>gi|33504432|emb|CAD43730.1| putative poly(A)-binding protein [Mangifera indica]
Length = 130
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 16 LYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILEMN 75
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 76 GKMVVSKPLFV 86
>gi|156554641|ref|XP_001605226.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Nasonia vitripennis]
Length = 501
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCG-QVVDCRICGDPNSVLRFAFIEFTDEEGARA 311
E IRRT+ V ++D T++QL F +V R+C + +A +EF+++
Sbjct: 162 EEIRRTLVVGNLDASTTDQQLIEFFGNHNVEVKYTRLCTRDSDTDHYALVEFSEQASIVP 221
Query: 312 ALNLAGTMLGFYPVRVLPSKTAI 334
AL L G ML P+++ S AI
Sbjct: 222 ALQLNGQMLNDRPIKIGHSVQAI 244
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYG 142
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--- 355
F+ F EE A ++ + G +L V V F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIEKVNGMLLNGKKVYV-----------GRFIPRKEREKELGEKAKLF 191
Query: 356 --IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFVMVIASST 409
+Y N + +++ ++ FE G++ +++ D S FV F A+ T
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKF-GKITSYKVMSKDDGKSKGFGFVAFESPEAAET 247
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ ++R+T V++ ++D + + L F G ++ C++ D N+ + +
Sbjct: 125 RIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENANSKGYG 184
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCART 355
F+ + E A A+ N+ G +L V V +P K ++ V +E +
Sbjct: 185 FVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKV---------EEMKANFTN 235
Query: 356 IYCTNIDKKVTQADVKLFFE 375
IY NID + T + + FE
Sbjct: 236 IYVKNIDSETTDNEFRELFE 255
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALNL 315
+YV ++D VTE L LF GQV R+C D + L +A++ + +G RA L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 316 AGTMLGFYPVRVL 328
T++ P R++
Sbjct: 115 NYTLIKGRPCRIM 127
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D T E+L F GCG + + C + G P FA+IEF
Sbjct: 188 EKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKG---FAYIEFA 244
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 351
D + A+ + ++ ++V P +T ++ T P R M
Sbjct: 245 DMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAM 291
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 23/148 (15%)
Query: 261 VSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV---LRFAFIEFTDEEGARAALNLAG 317
V+ + Q +TE ++ ++F G + CR+ D F F+ + +EE A+ A+
Sbjct: 108 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 165
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES- 376
L YP+R K + A P+++D +E +Y TN+ + +T+ + + F
Sbjct: 166 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 214
Query: 377 ---VCGEVYRLRLLGDYHHSTRIAFVEF 401
V + R +L G +AFV F
Sbjct: 215 GTIVQKNILRDKLTG---QPRGVAFVRF 239
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 162 FKRDM--RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR 219
+DM RE+ +FS + P+ + L +T G++ GF N L N A
Sbjct: 111 LPQDMTEREMYSMFSAMGPIESCRLMRDLKQT--------GYSYGFGFVNYL---NEEA- 158
Query: 220 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 279
A A++ + +R+ + Q ++I +Y++++ + +TEEQL +F
Sbjct: 159 -----AQRAIKCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGK 213
Query: 280 CGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAALN 314
G +V ++ G P V AF+ F E A+ A++
Sbjct: 214 YGTIVQKNILRDKLTGQPRGV---AFVRFNKREEAQEAIS 250
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV-----LRFAFIEFTDEEGARAA 312
T+++ +++ TEE L +F G V C + N + F F+E+ E A+ A
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 313 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L L G+++ + + V S+ AI PV + R ++ ++ I NI + + +++
Sbjct: 778 LKQLQGSVVDGHKLEVKISERAIKPVVTSARQRQTAHKQKTSK-ILVRNIPFQANKQEIR 836
Query: 372 LFFESVCGEVYRLRL 386
F S GE+ +RL
Sbjct: 837 ELF-STFGELKTVRL 850
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N ++ ++ F S G +R++ D + +R FV F
Sbjct: 192 NVYIKNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSF 238
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 235 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----G 290
F K +NS S A++EE+ R++YV ++D T E++ F CG V I G
Sbjct: 119 FEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 178
Query: 291 DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
P FA++EF + E + +L L + L ++V +T +
Sbjct: 179 QPKG---FAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNV 219
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 347 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVI 405
++ E+ +R+IY N+D T +V+ F+S CG V R+ +L D + A+VEFV V
Sbjct: 134 EKEEVDSRSIYVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEVE 192
Query: 406 ASSTLFIHTE 415
A I E
Sbjct: 193 AVQNSLILNE 202
>gi|255074269|ref|XP_002500809.1| predicted protein [Micromonas sp. RCC299]
gi|226516072|gb|ACO62067.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+ RTVY +++ +TE+ LA F G V + G + RF F+EF + A +A
Sbjct: 238 VSRTVYAGNVNSSITEDMLADFFSIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAESAKA 297
Query: 315 LAGTMLGFYPVRV 327
L GT + ++V
Sbjct: 298 LTGTQVAEMTIKV 310
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD 305
L EE+ R +YV +I + VT ++LAA+F G V + D + RF F+ +
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMST 120
Query: 306 EEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP---RTEDEREMC----ARTIY 357
E A AA+ +L T +G ++V V +FLP R+ E E +Y
Sbjct: 121 PEEANAAIESLNETEVGGRKIKVN--------VTESFLPNIDRSAPEPEPVFVDSQYKVY 172
Query: 358 CTNIDKKVTQADVKLFFESVCGEV 381
N+ K VT +K FF S GEV
Sbjct: 173 VGNLAKSVTTEMLKNFF-SEKGEV 195
>gi|403355024|gb|EJY77076.1| FHA domain containing protein [Oxytricha trifallax]
Length = 628
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC--GDPNSVLRFAFIEFTDEEGARA 311
I + T+YVS++ VT++ L LF CG+++ R+ FAFI DE+ AR
Sbjct: 378 IKQDTIYVSNLPFSVTDKDLQDLFGDCGKILSIRMPLNNQTKQGRGFAFITMADEKAARR 437
Query: 312 ALNLAGTMLGFYPVRV 327
ALN G FY R+
Sbjct: 438 ALNYDGHK--FYDRRL 451
>gi|70921491|ref|XP_734065.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506450|emb|CAH86914.1| hypothetical protein PC302221.00.0 [Plasmodium chabaudi chabaudi]
Length = 160
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 237 QGKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 293
Q KR ++ + L ++ ++ + +Y+ +I ++ E + F G+ + +
Sbjct: 19 QKKRLVDFQNELNEKNKKFDVFSKIIYMENIPEKYNESDVVEFFKHVGKTTSYKFQYNEQ 78
Query: 294 SVLRFAFIEFTDEEGARAALNLAGT 318
+ A++EF +EE A+AALNL+GT
Sbjct: 79 INMYTAYVEFINEENAKAALNLSGT 103
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N ++ ++ F S G +R++ D + +R FV F
Sbjct: 192 NVYIKNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSF 238
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T+YV +D++VT+ L LFV G VV + D +S F FIEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 372
M+ Y P++V + + E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 373 FFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMVIASST 409
F++ V +V ++ + +S AFV F AS +
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDS 157
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 288
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 183 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 241
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
G V ++EF DEE A+ L G L P+ IA + TE E
Sbjct: 242 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPI--------IAQL-------TEAE 283
Query: 349 REMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH 392
+ AR +Y NI +T++D++ FE GE+ ++L +
Sbjct: 284 KNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGG 342
Query: 393 STR-IAFVEF 401
+R FV+F
Sbjct: 343 RSRGYGFVQF 352
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 288
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 183 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 241
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
G V ++EF DEE A+ L G L P+ IA + TE E
Sbjct: 242 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPI--------IAQL-------TEAE 283
Query: 349 REMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH 392
+ AR +Y NI +T++D++ FE GE+ ++L +
Sbjct: 284 KNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGG 342
Query: 393 STR-IAFVEF 401
+R FV+F
Sbjct: 343 RSRGYGFVQF 352
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 233 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC--- 289
K G + + S A +EE R+V+V ++D T E++ F CG V I
Sbjct: 62 KEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 121
Query: 290 -GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
G P FA++EF + E + AL L + L ++VLP +T +
Sbjct: 122 FGQPKG---FAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNV 164
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
TV+V ++ TE+ L+ F GCG + R+ DP S + F ++ F+D + A+ + +
Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEM 426
Query: 316 AGTMLGFYPVRV 327
G + P R+
Sbjct: 427 NGHFIAGRPCRL 438
>gi|340503205|gb|EGR29817.1| RNA binding motif protein 34, putative [Ichthyophthirius
multifiliis]
Length = 330
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALN 314
+T+++ ++ Q+TEE L F+ CG + + RI DP ++ F +I F D + AL
Sbjct: 160 KTIFIGNLPFQITEEALRNHFIDCGNIQNLRIIRDPYTHNGKGFGYIYFEDILSFKNALL 219
Query: 315 LAGTMLGFYPVRV---LPSKTAIA 335
G++L +RV +P K I
Sbjct: 220 KNGSLLEKRSIRVKKAVPEKKLIK 243
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV D+D VT+ QL F G VV R+C D + L + ++ FT+ ++ ARA
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L L P+RV+ S R R A I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 375 ESVCGEVYRLRLLGDYH-HSTRIAFVEFV 402
SV G + ++ D S FV++
Sbjct: 145 -SVFGNIVSCKVAVDSSGQSKGYGFVQYA 172
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+YV ++D +++E+L +F G V C++ DPN + + F+ F T EE A L+
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLS 379
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 380 GKMIESKPLYV 390
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ +RR+ +++ ++D+ + + L F G +V C++ D + + +
Sbjct: 108 RVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGYG 167
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR---- 354
F+++ +EE A+ A+ L G +L V V P FL R ER+ A
Sbjct: 168 FVQYANEESAQKAIEKLNGMLLNDKQVYVGP-----------FLRR--QERDSTANKTKF 214
Query: 355 -TIYCTNIDKKVTQADVKLFF 374
+Y N+ + T D+K F
Sbjct: 215 TNVYVKNLAESTTDDDLKNAF 235
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ V++ ++D+ + + L F G ++ C++ D N +AF
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F ++ A RA + G +L V V F R E E E+ A+
Sbjct: 143 VHFETQDAADRAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N ++ +K FE G+ ++++ D +R FV F
Sbjct: 192 NVYIKNFGDEMEDEQLKEMFEKY-GKTLSVKVMTDSSGKSRGFGFVSF 238
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ +TE L F G V+ R+C D L +A++ F+ A AL+
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVVKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S AFV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|33504434|emb|CAD44189.1| putative poly(A) binding protein [Mangifera indica]
Length = 130
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 316
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 16 LYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILEMN 75
Query: 317 GTMLGFYPVRV 327
G M+ P+ V
Sbjct: 76 GKMVVGKPLYV 86
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
+ E + R++++ ++D + T+ L F CGQ+ C I D +S L A+IEF E
Sbjct: 218 EEELTLARSIFIKNVDYKTTKNDLEDHFKECGQITRCTIATDKHSGQPLGHAYIEFATLE 277
Query: 308 GARAALNLAGTMLGFYPVRVLPSK 331
GA+ + L ++ + V P +
Sbjct: 278 GAQRSKLLNESLFKGRQITVQPKR 301
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTD 305
LA++EE+ R++YV ++D Q T EQL F G + I D S L +A++EF
Sbjct: 25 LAKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEK 84
Query: 306 EEGA-RAALNLAGTMLGFYPVRVLPSKT 332
E +A +L G VRV P +T
Sbjct: 85 IESVNKAVEDLHGKEFRGREVRVTPKRT 112
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
TV+V ++ TE+ L+ F GCG + R+ DP S + F ++ F+D + A+ + +
Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEM 426
Query: 316 AGTMLGFYPVRV 327
G + P R+
Sbjct: 427 NGHFIAGRPCRL 438
>gi|67480907|ref|XP_655803.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472962|gb|EAL50415.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449707557|gb|EMD47202.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 297
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 316
+V++ + + + E ++ F+ CG++ + PN + FIEF D++GA A +
Sbjct: 15 SVFIGKLPKSMKENEIREKFITCGRISRMMMQYYPNGQSKGCCFIEFEDKKGAERACSRD 74
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD-VKLFFE 375
G+++ +RV ++ +N LP+T ++ + I+ + T++ VK+F
Sbjct: 75 GSIIDKQYIRVNMAEKKPMKLNYKHLPKTTQKKMNNSYCIFVGKVSSITTESTLVKIF-- 132
Query: 376 SVCGEVYRLRL 386
+ CG+V R+ +
Sbjct: 133 AKCGKVLRVTI 143
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 40/202 (19%)
Query: 241 RMNSRTSLAQRE-EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR----ICGDPN-- 293
++++R +R+ E +RTV++ +I + ++ + LF GCG + R +P
Sbjct: 289 KVSTRPKKRKRDPEADKRTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSNPKLP 348
Query: 294 ------------SVLRF-AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 340
S+ F A+I F ++E A AL L G + +RV ++ P
Sbjct: 349 KRAALITKDFHESMASFNAYIVFKEQESATKALKLNGEKFLNFHLRV----DSLHP---- 400
Query: 341 FLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI---- 396
+ + D++ R+++ N+ +V + +V+L F+ CGEV +RL+ D T I
Sbjct: 401 GVKKCHDDK----RSVFLGNLPLEVQEDEVRLHFQE-CGEVENVRLVRD--RGTGIGKGF 453
Query: 397 AFVEFVMVIASS-TLFIHTEFY 417
FV F V A L +H E +
Sbjct: 454 GFVLFKDVCAVDLALKMHEEVF 475
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAA 312
+ ++YV D+D V+E QL LF GQV+ R+C D L +A++ + + + A A
Sbjct: 2 VSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRA 61
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L L L F PV + + +P+ R+ I+ N+D+ + +
Sbjct: 62 LEL----LNFTPVNGKAVRIMFSHRDPSI-------RKSGTANIFIKNLDRAIDNKALHD 110
Query: 373 FFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
F S G + ++ D + S FV+F
Sbjct: 111 TFVSF-GNILSCKVATDSNGQSKGYGFVQF 139
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T YV ++D QV+EE L LFV G VV+ + D + L + F+EF EE A A+ +
Sbjct: 7 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 66
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 67 L-NMIKLYGKPIRV 79
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 304
++ E R+VYV ++D + E+L A F GCG+V + C + G P +A+IEF
Sbjct: 153 EKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKG---YAYIEFA 209
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+ +AA+ L ++ ++VLP +T
Sbjct: 210 TKGSVQAAVELDQSLFRGRVIKVLPKRT 237
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 234 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 288
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 179 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 237
Query: 289 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 348
G V ++EF DEE A+ L G L P+ IA + TE E
Sbjct: 238 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPI--------IAQL-------TEAE 279
Query: 349 REMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH 392
+ AR +Y NI +T++D++ FE GE+ ++L +
Sbjct: 280 KNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGG 338
Query: 393 STR-IAFVEF 401
+R FV+F
Sbjct: 339 RSRGYGFVQF 348
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV-----LRFAFIEFTDEEGARAA 312
T+++ +++ TEE L +F G V C I N + F F+E+ E A+ A
Sbjct: 738 TLFIKNLNFSTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQKA 797
Query: 313 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L L G ++ + + V S+ A P PT + + R+ I NI + +++
Sbjct: 798 LKQLQGHVVDGHKLEVRISERATKPA-PTATRKKQVARKQTTSKILVRNIPFQADSREIR 856
Query: 372 LFFESVCGEVYRLRL 386
F S GE+ +RL
Sbjct: 857 ELF-STFGELKTVRL 870
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F +E A A++ + G +L V V F R E E E+ AR T
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 360 NI 361
N+
Sbjct: 192 NV 193
>gi|148693757|gb|EDL25704.1| mCG9666, isoform CRA_a [Mus musculus]
Length = 116
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V +++ +VTEE L LF G V+ +I D + L+ FAF+ F E A+NL
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|403355446|gb|EJY77299.1| FHA domain containing protein [Oxytricha trifallax]
Length = 628
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC--GDPNSVLRFAFIEFTDEEGARA 311
I + T+YVS++ VT++ L LF CG+++ R+ FAFI DE+ AR
Sbjct: 378 IKQDTIYVSNLPFSVTDKDLQDLFGDCGKILSIRMPLNNQTKQGRGFAFITMADEKAARR 437
Query: 312 ALNLAGTMLGFYPVRV 327
ALN G FY R+
Sbjct: 438 ALNYDGH--KFYDRRL 451
>gi|149041583|gb|EDL95424.1| RNA binding motif protein 7 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 265
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V +++ +VTEE L LF G V+ +I D + L+ FAF+ F E A+NL
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 247 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 301
S ++EE+ R++YV ++D T E+L A F CG++ + C + G P +A+I
Sbjct: 139 SPQEKEEVDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKG---YAYI 195
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
EF +AA+ L ++ ++V P +T
Sbjct: 196 EFAATTSVQAAVKLDESVFRDRVIKVCPKRT 226
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEE 307
++E+ R+VYV ++D + T ++ F CG+V I D + + FAF+EF E
Sbjct: 39 EQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLE 98
Query: 308 GARAALNLAGTML 320
+ AL L+GTM
Sbjct: 99 SVQLALVLSGTMF 111
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 331 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD- 389
K A++ P E++ + AR++Y N+D K T ++++ F +VCG+V R+ + D
Sbjct: 23 KQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHF-AVCGKVARVTIPKDK 81
Query: 390 -YHHSTRIAFVEF-------VMVIASSTLF 411
+ AFVEF + ++ S T+F
Sbjct: 82 FTGYQKNFAFVEFQKLESVQLALVLSGTMF 111
>gi|367015182|ref|XP_003682090.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
gi|359749752|emb|CCE92879.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
Length = 388
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 226 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 285
N ++ KSF G+ N SL++ R ++V ++ T+E L F CG++V
Sbjct: 193 NLLIKNSKSF-DGRPDKNDLVSLSKNPP--SRILFVGNLSFDTTDELLKKHFQHCGEIVK 249
Query: 286 CRICG--DPNSVLRFAFIEFTDEEGARAALNLAGT-MLGFYPVRV 327
R+ D FAF++F DEEGA AL G + P+R+
Sbjct: 250 IRMATFQDSGKCKGFAFVDFKDEEGATNALKDKGCRKIAQRPIRM 294
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
++YV D+ ++++E L LF G ++ RIC D + L +A++ F + + A AL+
Sbjct: 7 SLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD- 65
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L + V+ +P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 66 ---TLNYASVKGIPIRIMWSQRDPSI-------RKSGIGNIFIKNLDKSI---DNKALYD 112
Query: 376 S-----------VCGEVYRLRLLGDYHHSTRIAFVEF 401
+ VC + GD S FV F
Sbjct: 113 TFSAFGNILSCKVCQATKKGDNGGDNVESAGYGFVHF 149
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-LAG 317
+YV ++D V +E+L F G + ++ D F F+ F E A AL ++G
Sbjct: 299 LYVKNLDDSVDDERLRQEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMSG 358
Query: 318 TMLGFYPVRV 327
M+G P+ V
Sbjct: 359 HMIGSKPLYV 368
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T YV ++D Q++EE L LFV G VV+ + D N + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-C----GDPNSVLRFAFIEFT 304
++ E+ R++YV ++D T E+L A F GCG + I C G P FA+IEF
Sbjct: 86 EKAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKG---FAYIEFG 142
Query: 305 DEEGARAALNLAGTMLGFYPVRVLPSKT 332
+E AL + T+ ++V P +T
Sbjct: 143 SKEFVETALAMNETLFRGRQIKVNPKRT 170
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F +E A A++ + G +L V V F R E E E+ AR T
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 360 NI 361
N+
Sbjct: 192 NV 193
>gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
gi|449329681|gb|AGE95951.1| nucleolar protein of the gar family [Encephalitozoon cuniculi]
Length = 293
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 20/148 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
TV++ I +TE L + G+V V + D F ++EF EE + AL L
Sbjct: 88 TVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALKL 147
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
GT+ L + + + PR ER TIY +NI + + D+K +FE
Sbjct: 148 DGTVF-------LGREVVVNMAH----PRANKER----HTIYVSNIPYECDKRDLKKYFE 192
Query: 376 SVCGEVYRLRLLGDYHHS--TRIAFVEF 401
+ GEV + L D ++ FV+F
Sbjct: 193 GM-GEVVGMSLPYDRDNNRLKGYGFVDF 219
>gi|255569500|ref|XP_002525717.1| conserved hypothetical protein [Ricinus communis]
gi|223535017|gb|EEF36700.1| conserved hypothetical protein [Ricinus communis]
Length = 1034
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAALNLA 316
+++ + EE + +F G++V+ R+ + + RFAF+ ++ A+ AL
Sbjct: 501 IFIGGLSTDAREEDIRKVFGAVGEIVELRLVTNSKTGKNKRFAFLRYSSAADAKKALE-- 558
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV-KLFFE 375
+ V + + A+APV TI+ NIDKK T DV KL E
Sbjct: 559 ----KYAKVEICGKQCAVAPVEGN-------------DTIFLGNIDKKWTNGDVIKLLQE 601
Query: 376 SVCGEVYRLRLLGDYHHSTR---IAFVEFVMVIASSTLF--IH-TEFYILHNPSIAWLEE 429
++ ++ ++ D + R AFVE + F +H + L N +AW E
Sbjct: 602 IGIEKIDKVIVMTDPSNVGRNRGFAFVELETHKDAQIAFKKLHKKDLGKLQNIKVAWAEP 661
Query: 430 FS 431
S
Sbjct: 662 LS 663
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 314
R +YV+ + + VT++ L LF G V + R+ DPN + FAFIEF E+ A AAL+
Sbjct: 784 REIYVAGLSRFVTKKDLETLFRTYGTVKEVRMALDPNGRPKGFAFIEFEQEQDASAALS 842
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 314
R T+YV++ ++ + + LF G + D R S RF +I+FT A AAL
Sbjct: 692 RSTLYVTNFPEKADDAFVRNLFTKYGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALE 751
Query: 315 LAGTML-GFYPVRVLPSKTAIAPVNPTFLPRTEDER---EMCARTIYCTNIDKKVTQADV 370
L L P+ V S P + ER + R IY + + VT+ D+
Sbjct: 752 LHKQELEDGLPLNVYISN-----------PERKKERTDSDANDREIYVAGLSRFVTKKDL 800
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+ F + G V +R+ D + + AF+EF
Sbjct: 801 ETLFRTY-GTVKEVRMALDPNGRPKGFAFIEF 831
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + A +A+ +
Sbjct: 62 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAEAESAIGAM 121
Query: 316 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
G LG + R P+ + A P ++ T+YC + +T+
Sbjct: 122 NGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 181
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
++ F S G + +R+ D + AF+ F
Sbjct: 182 MQKTF-SPFGSIQEIRVFKDKGY----AFIRF 208
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N + + +K F S G +R++ D + +R FV F
Sbjct: 192 NVYIKNFGEDMDDDKLKDIF-SKYGNAMSIRVMTDENGKSRGFGFVSF 238
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+T++V ++ + +E L F CG+V D RI F +EF + G AL
Sbjct: 355 KTIFVGNLSFRTDKETLKKFFASCGKVADARIAEADGKSRGFGHVEFEERSGVENALKKV 414
Query: 317 GTMLGFYPVRV 327
G + P++V
Sbjct: 415 GEQIDGRPIKV 425
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 298 FAFIEFTDEEGARAALNLAGT-MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 356
AF+ F EEG A+ ++ + +G Y ++ KT P LP ED ++TI
Sbjct: 306 IAFVSFETEEGCNKAVEMSNSEFMGRY---LIIEKTKPKTERPAHLPVDED-----SKTI 357
Query: 357 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ N+ + + +K FF S CG+V R+ S VEF
Sbjct: 358 FVGNLSFRTDKETLKKFFAS-CGKVADARIAEADGKSRGFGHVEF 401
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTD-EEGARAALN 314
++YV D++ TE QL LF G VV R+C D L +A++ F+ ++ ARA
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L ++ P+R+L S+ +PT R+ I+ N+DK + ++ F
Sbjct: 104 LNFQVVNGKPIRILYSQR-----DPTI-------RKSGVGNIFIKNLDKDIDTVALRDTF 151
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
G + ++ D +++ F++F
Sbjct: 152 AQF-GNIVSAKVATDGQGNSKGYGFIQF 178
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD-EEGA 309
E++ +Y+ +++ +E L LF G + CR+ D + V R AF+ F+ EE
Sbjct: 319 EKMAGANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEAT 378
Query: 310 RAALNLAGTMLGFYPVRV 327
RA L G M+G P+ V
Sbjct: 379 RAVTELNGKMVGAKPLYV 396
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 315
T+YV IDQ+VT+E L LF CG VV+ + D + + F+EF EE A ++ +
Sbjct: 13 TIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYSIKI 72
Query: 316 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKL 372
++ Y P++V + ++D+R + I+ N+D+ +T+ +
Sbjct: 73 M-HLVKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDQSITEQQLHD 117
Query: 373 FFESVCGEVYRLRLL--GDYHHSTRIAFVEF 401
F S G + R++ D S AFV +
Sbjct: 118 TF-SQFGLIISRRIVRDPDNDESKGYAFVSY 147
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 238 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--V 295
GK ++ S +R + + +++ ++DQ +TE+QL F G ++ RI DP++
Sbjct: 80 GKPIKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDES 139
Query: 296 LRFAFIEFTDEEGARAALN 314
+AF+ + + E A AA+N
Sbjct: 140 KGYAFVSYDNFEAADAAIN 158
>gi|296081813|emb|CBI20818.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGA 309
E+I RTVYV+++ T+E L+ F CG VV+ I D R AFI F E
Sbjct: 451 EDIEPRTVYVTNVHFAATKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESV 510
Query: 310 RAALNLAGTMLGFYPVRVL 328
AL L+GT V+V
Sbjct: 511 NKALALSGTSFFSRTVKVF 529
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +RR+ V++ ++D+Q+ + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGNSKGYG 133
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A ++ ML +V K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIEKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 183
Query: 356 -IYCTNIDKKVTQADVKLFFE 375
+Y N ++ +K FFE
Sbjct: 184 NVYVKNFTEEFDDEKLKDFFE 204
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-- 289
+K G + S S A++EE+ R++YV ++D T E++ F CG V I
Sbjct: 45 EKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 104
Query: 290 --GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
G P FA++EF + + + AL L T L ++V +T +
Sbjct: 105 KFGQPKG---FAYVEFVEADAVQNALILNETELHGRQLKVSAKRTNV 148
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 244 SRTSLA-----QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPN 293
S+TSL+ + E+ R+VYV ++D T ++L A F CG + + C + G P
Sbjct: 68 SKTSLSVLSDEDKAEVDLRSVYVGNVDYGATADELEAHFRACGPINRVTILCNKYTGQPK 127
Query: 294 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 343
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 128 G---FAYIEFDTRDAVEAAMALDESNFRNRALKVLPKRTNVPGMSMTNRP 174
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F +E A A++ + G +L V V F R E E E+ AR T
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 360 NI 361
N+
Sbjct: 192 NV 193
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAF 300
+S + A ++ ++YV ++D V+E L LF G V R+C D + L +A+
Sbjct: 33 SSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAY 92
Query: 301 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 360
+ F+D E + A+ L + P++ + + +P+ R+ I+ N
Sbjct: 93 VNFSDHEAGKQAIE----KLNYTPIKGKLCRIMWSQRDPSL-------RKKGHGNIFIKN 141
Query: 361 IDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+++ + D K F+ SV G + ++ D ++ FV F
Sbjct: 142 LNQDI---DNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHF 182
>gi|221119399|ref|XP_002162311.1| PREDICTED: uncharacterized protein LOC100198013 [Hydra
magnipapillata]
Length = 273
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 315
TV+VS+I+ +VTEE L LF+ G + + I D +S FAF+ ++D + L
Sbjct: 11 TVFVSNIESRVTEELLWELFLQAGPLKNVHIPIDRSSGKSKTFAFVTYSDISAVAFSCEL 70
Query: 316 AGTMLGF-YPVRVLPSKTAIAPV 337
T+ F P+ PSK APV
Sbjct: 71 FNTLKLFNRPIYCKPSKDGKAPV 93
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D+K +
Sbjct: 72 MNFDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DIKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 359
+ F +E A RA + G +L V V F R E E E+ AR T
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 360 NI 361
N+
Sbjct: 192 NV 193
>gi|291222526|ref|XP_002731265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Saccoglossus kowalevskii]
Length = 648
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
V+V I + + E+++ LF CG++ D R+ DP S L +AF+ F D EGA+ A+
Sbjct: 176 VFVGKIPRDMFEDEIIPLFEKCGKIWDLRLMMDPLSGLNRGYAFVTFCDREGAQEAV 232
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 309
+E RRTV+V + ++ ++L A F G VV+ +I D S ++EF DEE
Sbjct: 242 DERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEESV 301
Query: 310 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--------RTIYCTNI 361
+ A+ L G L P+ IA + R E A +Y NI
Sbjct: 302 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNI 353
Query: 362 DKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFV 402
+T+ D+K FE GE+ ++L + S FV+F+
Sbjct: 354 HFSITEDDLKNVFEPF-GELEFVQLQKEEQGRSKGYGFVQFI 394
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAAL 313
R++V+V ++ +V +E+L F CGQV R+ D + + F F+ F+ + A AL
Sbjct: 150 RKSVFVGNLPHEVQDEELWNCFSECGQVTGVRVIRDRETGMGKGFGFVTFSKLDAAALAL 209
Query: 314 NLAGTMLGFYPVR 326
++G + P+R
Sbjct: 210 EMSGIHMSGRPIR 222
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAA 312
+ ++YV D++ V+E QL +F GQVV R+C D L +A++ + + + A A
Sbjct: 22 VSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRA 81
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 365
L L L F V P + + +P+ R+ I+ N+DK +
Sbjct: 82 LEL----LNFNAVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSI 123
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 250 QREEIIRR----TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFT 304
+R+E I + +Y+ ++D + +E+L +F G +V C++ DP R + F+ F+
Sbjct: 295 ERKERIEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFS 354
Query: 305 D-EEGARAALNLAGTMLGFYPVRV----------------LPSKTAIAPVNPTFLP 343
+E RA + G M+G P+ V +T + P PT LP
Sbjct: 355 SPDEATRAVTEMNGKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLP 410
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R + R+ IR++ +++ ++D+ + + L F G ++ C++ DP+ + +
Sbjct: 96 RIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGYG 155
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 357
F++F EE A+ A+ ML L K V P + D+ + ++ +Y
Sbjct: 156 FVQFEQEESAQTAIEKVNGML-------LNDKQVF--VGPFVRRQERDQSGVVSKFNNVY 206
Query: 358 CTNIDKKVTQADVKLFFES 376
N+ T ++K FE+
Sbjct: 207 VKNLADSTTDDELKKVFEA 225
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDE 306
A + ++ ++YV D+ +V++ L A F G V+ R+C D L + ++ F D
Sbjct: 5 AASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDP 64
Query: 307 EGARAALNLAG--TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 364
+ A AL + +++G P+R++ S+ R R+ I+ N+DK
Sbjct: 65 KHAEQALEVLNYESLMG-RPIRIMWSQ------------RDPSLRKSGKGNIFIKNLDKS 111
Query: 365 VTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ Q ++ F S G + +++ D + S FV F
Sbjct: 112 IEQKELYDTF-SFFGRILSCKIVMDENGQSKGYGFVHF 148
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
A R+++ + K+R+ + + Q ++ +YV ++D + +++L F G + +
Sbjct: 267 AQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Query: 288 ICGDPNSVLR-FAFIEFTD-EEGARAALNLAGTMLGFYPVRV 327
+ D N+ + F F+ F + E+ ARA ++ GT++G P+ V
Sbjct: 327 VMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYV 368
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGTSKGYG 133
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 183
Query: 356 -IYCTNIDKKVTQADVKLFFE 375
+Y N + +K FFE
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFE 204
>gi|354494485|ref|XP_003509367.1| PREDICTED: RNA-binding protein 7-like [Cricetulus griseus]
gi|344237164|gb|EGV93267.1| RNA-binding protein 7 [Cricetulus griseus]
Length = 265
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V +++ +VTEE L LF G V+ +I D + L+ FAF+ F E A+NL
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 316
+YV + D + TE+ L LF G + CR+ D N V R F F+ F + + A AAL ++
Sbjct: 305 LYVRNFDPEFTEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALREMS 364
Query: 317 GTMLGFYPVRV 327
G ML P+ V
Sbjct: 365 GRMLNGKPLVV 375
>gi|392512575|emb|CAD26218.2| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNL 315
TV++ I +TE L + G+V V + D F ++EF EE + AL L
Sbjct: 65 TVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALKL 124
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
GT+ F V+ VN PR ER TIY +NI + + D+K +FE
Sbjct: 125 DGTV--FLGREVV--------VNMAH-PRANKER----HTIYVSNIPYECDKRDLKKYFE 169
Query: 376 SVCGEVYRLRLLGDYHHS--TRIAFVEF 401
+ GEV + L D ++ FV+F
Sbjct: 170 GM-GEVVGMSLPYDRDNNRLKGYGFVDF 196
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
R + ++ + Q +TE++L ++FV G V CR+ D + F F+ +T E A A+
Sbjct: 81 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 140
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
N T+ G ++V + ++ P+ E+ +Y TN+ + +T+ V+
Sbjct: 141 N---TLNG---LQVQNKRLKVSFARPS-------GEEIKETNLYVTNLPRNITEKQVEEI 187
Query: 374 FESVCGEVYRLRLLGD 389
F S G++ + +L D
Sbjct: 188 F-SKFGQIVQKNILKD 202
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 256 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 313
R + ++ + Q +TE++L ++FV G V CR+ D + F F+ +T E A A+
Sbjct: 37 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 96
Query: 314 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 373
N T+ G ++V + ++ P+ E+ +Y TN+ + +T+ V+
Sbjct: 97 N---TLNG---LQVQNKRLKVSFARPS-------GEEIKETNLYVTNLPRNITEKQVEEI 143
Query: 374 FESVCGEVYRLRLLGD 389
F S G++ + +L D
Sbjct: 144 F-SKFGQIVQKNILKD 158
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 315
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + A +A+ +
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 316 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 369
G LG + R P+ + A P ++ T+YC + +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 370 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 401
++ F S G + +R+ D + AF+ F
Sbjct: 177 MQKTF-SPFGSIQEIRVFKDKGY----AFIRF 203
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 230 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 288
RR + G G R T L+ EE RTV+ + Q+V L F G+V D R+
Sbjct: 212 RRSPANGAGGDRTPP-TELSP-EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 269
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 344
C A+IEF D E AL L+G L P+ V + K + P F P+
Sbjct: 270 LCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPK 329
Query: 345 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
+ +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 330 S----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMD 369
>gi|389637036|ref|XP_003716159.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|351641978|gb|EHA49840.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|440469252|gb|ELQ38369.1| hypothetical protein OOU_Y34scaffold00542g61 [Magnaporthe oryzae
Y34]
gi|440486718|gb|ELQ66557.1| hypothetical protein OOW_P131scaffold00378g26 [Magnaporthe oryzae
P131]
Length = 648
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 240 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-- 297
RR ++ + + E+ RR+V+V ++ + +TEEQ+A LF G V +I + +
Sbjct: 350 RRHDADEAYLTQYEVDRRSVFVGNLPRDITEEQVADLFSAIGTVNRVQIIKRTGTTIEQP 409
Query: 298 FAFIEFTDEEGARAAL 313
FAFIEF + AA+
Sbjct: 410 FAFIEFDRPDTPEAAI 425
>gi|27753952|ref|NP_659197.2| RNA-binding protein 7 [Mus musculus]
gi|55976586|sp|Q9CQT2.1|RBM7_MOUSE RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|18141295|gb|AAL60585.1|AF458961_1 RNA binding motif protein 7 [Mus musculus]
gi|12837596|dbj|BAB23878.1| unnamed protein product [Mus musculus]
gi|12839998|dbj|BAB24729.1| unnamed protein product [Mus musculus]
gi|12842963|dbj|BAB25804.1| unnamed protein product [Mus musculus]
gi|74181616|dbj|BAE30073.1| unnamed protein product [Mus musculus]
gi|109733079|gb|AAI16932.1| RNA binding motif protein 7 [Mus musculus]
gi|111600453|gb|AAI19039.1| RNA binding motif protein 7 [Mus musculus]
gi|148693760|gb|EDL25707.1| mCG9666, isoform CRA_d [Mus musculus]
Length = 265
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V +++ +VTEE L LF G V+ +I D + L+ FAF+ F E A+NL
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++DQ + + L F G ++ C++ D N R FA
Sbjct: 120 RIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFA 179
Query: 300 FIEFTDEEGARAALNLAGTML 320
F+ ++ E A AA+ ML
Sbjct: 180 FVHYSTGEAADAAIKAVNGML 200
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S FV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHF 145
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 301 IEFTDEEGARAALNLAGTML 320
+ F +E A A++ ML
Sbjct: 143 VHFETQEAAERAIDKMNGML 162
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++DQ + + L F G ++ C++ D N R FA
Sbjct: 120 RIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFA 179
Query: 300 FIEFTDEEGARAALNLAGTML 320
F+ ++ E A AA+ ML
Sbjct: 180 FVHYSTGEAADAAIKAVNGML 200
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIE 302
L Q E R++YV ++D T E+L A F CG+V + C + G P +A++E
Sbjct: 133 LRQTVEADHRSIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKG---YAYVE 189
Query: 303 FTDEEGARAALNLAGTMLGFYPVRVLPSKT 332
F + A+AA+ L ++ ++VLP +T
Sbjct: 190 FATQRSAQAAVELDESIFRGRALKVLPKRT 219
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN-L 315
+YV D+ + V EE L F G V R+C D + LR+ ++ + A AL+ L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
+++ P+RV+ S R D R I+ N+ V A ++ F
Sbjct: 183 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLSSSVDNASLQELF- 229
Query: 376 SVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
S G+V ++ + ++R FV+F
Sbjct: 230 SKFGDVLSCKVAKNEDGTSRGYGFVQFT 257
>gi|357607075|gb|EHJ65345.1| hypothetical protein KGM_03830 [Danaus plexippus]
Length = 588
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 312
E IRRT+ + D+ + +T +QL F G+V R C L++A IE T++E A
Sbjct: 161 EEIRRTLLLIDVGE-LTSQQLIDHFCQAGEVSYVRFCEREVDNLKYALIEMTEQESISKA 219
Query: 313 LNLAGTMLGFYPVRVLPSKTAIA 335
L L G L ++V S AI+
Sbjct: 220 LQLNGVALNGQVIKVHHSTVAIS 242
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDE 306
A + ++ ++YV D+ +V++ L A F G V+ R+C D L + ++ F D
Sbjct: 5 AASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDP 64
Query: 307 EGARAALNLAG--TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 364
+ A AL + +++G P+R++ S+ R R+ I+ N+DK
Sbjct: 65 KHAEQALEVLNYESLMG-RPIRIMWSQ------------RDPSLRKSGKGNIFIKNLDKS 111
Query: 365 VTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEF 401
+ Q ++ F S G + +++ D + S FV F
Sbjct: 112 IEQKELYDTF-SFFGRILSCKIVMDENGQSKGYGFVHF 148
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
A R+++ + K+R+ + + Q ++ +YV ++D + +++L F G + +
Sbjct: 267 AQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Query: 288 ICGDPNSVLR-FAFIEFTD-EEGARAALNLAGTMLGFYPVRV 327
+ D N+ + F F+ F + E+ ARA ++ GT++G P+ V
Sbjct: 327 VMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYV 368
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-- 289
+K G + + S +EE R+V+V ++D T E++ F CG V I
Sbjct: 63 EKEIGSVQDPASVAASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 122
Query: 290 --GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
G P FA++EF + E + AL L+ + L ++VLP +T + P + PR
Sbjct: 123 KFGQPKG---FAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNV-PGMKQYRPR 175
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 314
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALT 63
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 315
VYV I ++ E+ + A F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 134 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 193
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 369
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 194 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEDD 244
Query: 370 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV------MVIASSTLF 411
+K FE+ +Y +L H F+E+ IAS LF
Sbjct: 245 IKSVFEAFGPILYCKLAQGSSVHTHKGYGFIEYANKQAMDEAIASMNLF 293
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A++ T G Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID---TFNG-YQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEF 401
+ F G + + +L D + T +AFV +
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRY 197
>gi|410907089|ref|XP_003967024.1| PREDICTED: la-related protein 7-like [Takifugu rubripes]
Length = 519
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 17/96 (17%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI-----CGDPNSVLRFAFIEFTDEEGARA 311
RTVYV + + VT + +F CG VV + GDP FAF+EF EE AR
Sbjct: 118 RTVYVELLPKDVTHGWIERVFAKCGTVVYVSVPRYKSSGDPKG---FAFVEFEKEEEARQ 174
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPV----NPTFLP 343
A+ + P P K I P P LP
Sbjct: 175 AIEVLNN-----PPEDAPRKAGIFPKTRCGKPVHLP 205
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 316
+YV I TE+ + + F CG + VDC + A I F E A+ AL L
Sbjct: 151 IYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 210
Query: 317 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
G +G +++ P K A F P + IY N+ +T+ +++ FF +
Sbjct: 211 GADMGGLFLKIQPYKATRANKASDFAPEILEGYNR----IYVGNLSWDITEEELRKFFNN 266
Query: 377 VCGEVYRLRL 386
E+ LR
Sbjct: 267 --SEITSLRF 274
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++ E ++VYV ++D T E++ F GCG V I D S FA++EFT+++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKD 130
Query: 308 GARAALNLAGTMLGFYPVRVLPSKT 332
G + AL + ++L ++V +T
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDQKRT 155
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA
Sbjct: 57 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 116
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 117 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDGAIDNKALHDTF 164
Query: 375 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D H +++ FV + A+++ +L+ +
Sbjct: 165 -AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKV 214
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 128 RIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYG 187
Query: 300 FIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 354
F+ + E A +A+ ++ G +L V V +P K R EM A
Sbjct: 188 FVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKD-----------RMSKFEEMKANF 236
Query: 355 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 402
IY NID + T + + FE G++ L D +R FV ++
Sbjct: 237 TNIYVKNIDPEATDDEFRALFEKY-GDITSASLAHDQEGKSRGFGFVNYI 285
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
T YV ++D Q++EE L LFV G VV+ + D N + F+EF EE A A+ +
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 316 AGTMLGFY--PVRV 327
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|342185222|emb|CCC94705.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 462
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 248 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 307
+A ++ RTVY+S + + + + CG V R+C FAF+E D E
Sbjct: 338 MASFPDLKMRTVYISHLPASLPQRTFMEMLNSCGSVNKVRVCRGKGYATLFAFVEMADSE 397
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNP 339
G AAL L + + + +R+ ++ I P
Sbjct: 398 GVVAALRLGKSNIFGHNIRLQMARNPIQDSQP 429
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 314
++YV ++D VTE L LF GQV R+C D + L +A++ + D G RA
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 315 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 103 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 150
Query: 375 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMVIASSTLFIHTEFYILHNPSI 424
+ G + ++ D + S FV + A++ H +L++ +
Sbjct: 151 -AAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 200
>gi|32493337|gb|AAH54774.1| RNA binding motif protein 7 [Mus musculus]
Length = 265
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 315
RT++V +++ +VTEE L LF G V+ +I D + L+ FAF+ F E A+NL
Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNL 69
Query: 316 A-GTMLGFYPVRV 327
G L P+++
Sbjct: 70 LNGIKLFGRPIKI 82
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 301
N+ TS A +EE+ R+V+V ++D T E++ F CG V I D + FA++
Sbjct: 69 NATTSEA-KEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYV 127
Query: 302 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
EF + E + A+ L+ + L ++V P +T +
Sbjct: 128 EFVEAEAIQEAVKLSESELHGRQIKVAPKRTNV 160
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 23/148 (15%)
Query: 261 VSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV---LRFAFIEFTDEEGARAALNLAG 317
V+ + Q +TE ++ ++F G + CR+ D F F+ + +EE A+ A+
Sbjct: 86 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 143
Query: 318 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES- 376
L YP+R K + A P+++D +E +Y TN+ + +T+ + + F
Sbjct: 144 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 192
Query: 377 ---VCGEVYRLRLLGDYHHSTRIAFVEF 401
V + R +L G +AFV F
Sbjct: 193 GTIVQKNILRDKLTG---QPRGVAFVRF 217
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 162 FKRDM--RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR 219
+DM RE+ +FS + P+ + L +T G++ GF N L N A
Sbjct: 89 LPQDMTEREMYSMFSAMGPIESCRLMRDLKQT--------GYSYGFGFVNYL---NEEA- 136
Query: 220 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 279
A A++ + +R+ + Q ++I +Y++++ + +TEEQL +F
Sbjct: 137 -----AQRAIKCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGK 191
Query: 280 CGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAALN 314
G +V ++ G P V AF+ F E A+ A++
Sbjct: 192 YGTIVQKNILRDKLTGQPRGV---AFVRFNKREEAQEAIS 228
>gi|221116369|ref|XP_002164038.1| PREDICTED: putative RNA-binding protein 15B-like [Hydra
magnipapillata]
Length = 620
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 233 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 292
+S+ + R N+ + R RT++V ++DQ +T+++L +F G + D + P
Sbjct: 162 RSYTNSRDRYNNDNHINPRAT---RTLFVGNLDQGITKDELMRIFEHWGAIDDIDVKRPP 218
Query: 293 NSVLRFAFIEFTDEEGARAALN 314
N + +AFI++ + E A +A N
Sbjct: 219 NGIPAYAFIKYLELEAAASAKN 240
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 15/133 (11%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGT 318
++++ + TE+++ F GCG+V RI AF+ F E A AAL + G
Sbjct: 251 IFIAGLPWSATEDEVKEHFAGCGEVTGARIPLQNGRSSGTAFVTFATSEAAEAALAMDGQ 310
Query: 319 MLG--FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 376
G + +R K DE+ +++ N+ V + V+ F
Sbjct: 311 DFGGRWMKIRTAEKKNMF------------DEKPEGCTSVFIGNLSWDVDENTVRETF-G 357
Query: 377 VCGEVYRLRLLGD 389
CGE+ RL D
Sbjct: 358 ECGEILSCRLATD 370
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 294
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 295 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 354
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 355 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
I+ N+ + D K ++ SV G++ ++ D + ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 210 SLIFNNHN--ARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREE---IIRRTVYVSDI 264
+LI NN N + + A A V ++ + + +L EE I ++++V ++
Sbjct: 2 ALIDNNSNFCSMEEELQAEARVLKQIQTKLSETMETGKKTLPTEEEQKSIDAKSIFVGNV 61
Query: 265 DQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNLAGTMLGF 322
D T +L A F GCGQ+V RI + N FA+IEF + A A+ + G+
Sbjct: 62 DFGATVAELEAHFYGCGQIVRTRIPKNKMTNRQKNFAYIEFECADNAENAMVMNGSTFRG 121
Query: 323 YPVRVLPSKT 332
P+ V +T
Sbjct: 122 RPIVVTTKRT 131
>gi|238585218|ref|XP_002390799.1| hypothetical protein MPER_09865 [Moniliophthora perniciosa FA553]
gi|215454652|gb|EEB91729.1| hypothetical protein MPER_09865 [Moniliophthora perniciosa FA553]
Length = 192
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 276 LFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 334
LF G V + R+ + N V + +AF+EF D + A+AAL L + V + +
Sbjct: 10 LFRQYGPVKEVRLATEENGVSKGYAFVEFEDVKDAQAALEANNQELRNRRIAVTLADSRA 69
Query: 335 APVNPTFLPRTEDER--EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH 392
N F T R E+ +R++ N+ V + ++ E V EV RL + D +
Sbjct: 70 KARNAKFNKDTGLGRKAEIKSRSLRIRNLPPGVQEGLLQQVVEKVA-EVKRLEVFADLNE 128
Query: 393 STRIAFVEFVMVIASSTLFIHTEFYILHNPSIAWLEEFSGEY 434
A VEF + L + TE + + + + EE + +
Sbjct: 129 ----AIVEFTNAAEAGKLLLRTEPLVFNGNELKFSEEATASH 166
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 309
EE RTV+ + Q+V L F G+V D R+ C A+IEF D E
Sbjct: 262 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESV 321
Query: 310 RAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 366
AL L+G L P+ V + K + P F P++ + +Y ++ +T
Sbjct: 322 ALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS----HVGPMRLYVGSLHFDIT 377
Query: 367 QADVKLFFESVCGEVYRLRLLGD 389
+ ++ FE G++ ++L+ D
Sbjct: 378 EEMLRGIFEPF-GKIDAIQLIMD 399
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 254 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARA 311
++ ++YV D+ +V++ L A F G V+ R+C D L + ++ F D + A
Sbjct: 10 LMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQ 69
Query: 312 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
AL + L + P+ P + + +P+ R+ I+ N+DK + Q ++
Sbjct: 70 ALEV----LNYEPLMGRPIRIMWSQRDPSL-------RKSGKGNIFIKNLDKSIEQKELY 118
Query: 372 LFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
F S G + +++ D + ++ FV F
Sbjct: 119 DTF-SFFGRILSCKIVMDENGQSKGYGFVHF 148
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 228 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 287
A R+++ + K+++ + + Q ++ +YV ++D + +++L F G + +
Sbjct: 267 AQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Query: 288 ICGDPNSVLR-FAFIEFTD-EEGARAALNLAGTMLGFYPVRV 327
+ D N+ + F F+ F + E+ ARA ++ GT++G P+ V
Sbjct: 327 VMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYV 368
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +R+T +++ ++DQ + + L F G ++ C++ D N R FA
Sbjct: 118 RIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFA 177
Query: 300 FIEFTDEEGARAALNLAGTML 320
F+ ++ E A AA+ ML
Sbjct: 178 FVHYSTGEAADAAIKAVNGML 198
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A++ Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEF 401
+ F G + + +L D + T +AFV +
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRY 197
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 204 GFFANNSLI-FNNH-------NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII 255
G A I F NH ++ NG ++R + ++G G +R+ E+
Sbjct: 55 GIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRI---------EQAP 105
Query: 256 RRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAA 312
+V+V D+ +VT+ +L A F+G V+ ++ +P S F FI F DE+ A
Sbjct: 106 EYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEA 165
Query: 313 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 371
L + G P+RV P+ + T T+ T++ I+ VT+ ++
Sbjct: 166 LTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNT----TVFVGGINDSVTEKVLR 221
Query: 372 LFFESVCGEV 381
F S GE+
Sbjct: 222 DTFNSA-GEI 230
>gi|242056799|ref|XP_002457545.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
gi|241929520|gb|EES02665.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
Length = 792
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 308
A + ++RTV +S++ +T + + LF CG+VVDC A++E++ E
Sbjct: 334 ADEADALKRTVQISNLSPVLTVDYIKQLFGLCGKVVDCTTT----DSKHIAYVEYSKPEE 389
Query: 309 ARAAL-----NLAGTMLGFYPVRVLPSK 331
A AAL N+ G L + LP K
Sbjct: 390 ATAALEFNSKNVGGRPLNVEMAKSLPPK 417
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 315
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 316 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 374
++ P+R++ S+ R R+ ++ N+DK + D K+ +
Sbjct: 72 MNFDVIKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKVLY 116
Query: 375 E--SVCGEVYRLRLLGDYHHSTRIAFVEF 401
+ S G + +++ D + S AFV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 300
R +QR+ +R++ V++ ++D+ + + L F G ++ C++ D N +AF
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAF 142
Query: 301 IEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
+ F +E A A+ + G +L V V F R E E E+ A+
Sbjct: 143 VHFETQEAADKAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEFT 191
Query: 356 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
+Y N ++V +K F S G+ ++++ D + ++ FV +
Sbjct: 192 NVYIKNFGEEVDDESLKELF-SQFGKTLSVKVMRDPNGKSKGFGFVSY 238
>gi|47228418|emb|CAG05238.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 255 IRRTVYVSDIDQQV---------------------------------TEEQLAALFVGCG 281
IRRTVYV +++ QV T EQL F G
Sbjct: 158 IRRTVYVGNLNSQVAKCQICGIRAEQRPRVEGQLMEGELDSFCLQTTTAEQLLEFFRQVG 217
Query: 282 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 326
V R+ GD RFAF+EF++++ AL G M G P++
Sbjct: 218 SVKFVRMAGDETQPTRFAFVEFSEQDSVARALTFNGVMFGDRPLK 262
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 306
+E RRTV+V + ++ +L F G Q+V RI G V ++EF DE
Sbjct: 165 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGV---GYVEFKDE 221
Query: 307 EGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIY 357
+ AL L G L PV V ++ T +P +P +Y
Sbjct: 222 DSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVP---------FHRLY 272
Query: 358 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF 401
NI VT+ D++ FE GE+ ++L D +R FV+F
Sbjct: 273 VGNIHFNVTEEDLRAVFEPF-GELEFVQLQKDESDRSRGYGFVQF 316
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 313
V+V D+ +V ++ LA F G + D R+ D NS + F+ F TD E A A +
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 314 NLAGTMLGFYPVRV-------------LPSKT-----AIAPVN----PTFLPRTEDEREM 351
N G LG +RV P +T A AP+N P +
Sbjct: 139 N--GEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVVQQTPA 196
Query: 352 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
T+Y N+ TQAD+ F+S+ G + +R+ D
Sbjct: 197 YNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQAD 233
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 259 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 313
V+V D+ +V +E L F G + D R+ D NS + F+ F TD E A A +
Sbjct: 110 VFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 169
Query: 314 NLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRTED----ERE 350
N G LG +RV P T A AP+N P + D +
Sbjct: 170 N--GEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTP 227
Query: 351 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 389
T+Y N+ TQAD+ F+S+ G + +R+ D
Sbjct: 228 SYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD 265
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 258 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 315
++YV D++ V E QL LF QVV R+C D + L +A++ F++ + A A+ L
Sbjct: 34 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASNAMEL 93
Query: 316 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 375
L F P+ + ++ +P+ R+ ++ N+D + ++ F
Sbjct: 94 ----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSIDNKALQETFA 142
Query: 376 SVCGEVYRLRLLGDYH-HSTRIAFVEF 401
S G V ++ D + S FV+F
Sbjct: 143 SF-GSVLSCKVAVDNNGQSKGYGFVQF 168
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R ++ R+ +R++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 105 RIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYG 164
Query: 300 FIEFTDEEGARAALNLAGTML 320
F++F +EE A++A+N ML
Sbjct: 165 FVQFENEEAAQSAINRLNGML 185
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 238 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 297
G+ M++ + +E ++R++Y+ ++D +L LF CG + I D + +
Sbjct: 92 GESMMDTDLPGSADDEEMKRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMP 151
Query: 298 --FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 338
FA++EF + E AL G M ++V + I N
Sbjct: 152 KGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKRKNIPGYN 194
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 253 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 310
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 311 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 370
A++ Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 371 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEF 401
+ F G + + +L D + T +AFV +
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRY 197
>gi|385301669|gb|EIF45843.1| nop13p [Dekkera bruxellensis AWRI1499]
Length = 323
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 257 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG--DPNSVLRFAFIEFTDEEGARAAL 313
R ++V ++ TE+QL F+ CG++V R+ D FAF++F DEEG AL
Sbjct: 117 RILFVGNLPFDTTEDQLREQFMHCGEIVKIRMATFEDSGKCKGFAFLDFKDEEGPSKAL 175
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 232 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--- 288
+K G + N+ S A +EEI R+V+V ++D T E++ F CG V I
Sbjct: 42 EKEMGSVQDPANASASQANKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTD 101
Query: 289 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 344
G P +A++EF + E + AL L + L ++V +T I P + PR
Sbjct: 102 KFGQPKG---YAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNI-PGMKQYRPR 154
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 269
S + + +A +N N A + ++ + TS A ++YV ++D VT
Sbjct: 9 SPVQDGADANGAQINTNVAAAQAEA--------PTPTSAAPAHNQNSASLYVGELDPSVT 60
Query: 270 EEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALNLAGTMLGFYPVR 326
E L LF GQV R+C D + L +A++ + + E+G +A L T++ P R
Sbjct: 61 EAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCR 120
Query: 327 VL 328
++
Sbjct: 121 IM 122
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 252 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 308
EE RTV+V + ++ + L F G++ D R+ D N R A++EF + E
Sbjct: 74 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 132
Query: 309 ARAALNLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRTEDEREMCARTIYCTNIDKKVT 366
A+ AL L GT L P+++ S +N P+ T+ R +Y ++ +T
Sbjct: 133 AQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRG--PMKLYIGSLHYNIT 190
Query: 367 QADVKLFFESVCGEVYRLRLLGD 389
+ +K FE G++ ++L+ D
Sbjct: 191 EEMLKGIFEPF-GKIDDIKLIKD 212
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 250 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEE 307
++ E ++VYV ++D T E++ F GCG V I D S FA++EFT+++
Sbjct: 89 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKD 148
Query: 308 GARAALNLAGTMLGFYPVRVLPSKT 332
G + AL + ++L ++V +T
Sbjct: 149 GMQNALAMTDSLLRGRQIKVDQKRT 173
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 255 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 312
I ++YV D+ +V+E+ L +F G V + R+C D N+ L +A++ + + A A
Sbjct: 8 ISSSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERA 67
Query: 313 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 372
L+ L P+R P + + +P+ R+ ++ N+DK + D K
Sbjct: 68 LD----TLNNTPIRGKPCRIMWSQRDPSL-------RKSGVGNVFIKNLDKGI---DHKA 113
Query: 373 FFE--SVCGEVYRLRLLGDYHHSTR-IAFVEF 401
++ S G + +++ D ++S++ FV +
Sbjct: 114 LYDTFSAFGNILSCKVVTDDNNSSKGFGFVHY 145
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 249 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEE 307
+Q + +T++V ++ + EQ+ F G+VVD R+ D S + +EF E
Sbjct: 405 SQSQATGSKTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAE 464
Query: 308 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE----REMCAR---TIYCTN 360
A+ AL G L +R+ +A + P + + R+ R T++
Sbjct: 465 AAQKALEFGGRDLMGRSLRI-----DLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKG 519
Query: 361 IDKKVTQADVKLFFES---VCGEVYRLRLLGDYH--HSTRIAFVEF 401
D V + ++ E CG++ R+ + DY S +A+++F
Sbjct: 520 FDTSVGEDQIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDF 565
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 240 RRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 296
RR + + + E E +RTV+V + + TE + F G+V D R+ D NS
Sbjct: 1 RRFKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 60
Query: 297 R--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM--- 351
++EF D A+ L+G +L PV V PS+ V P+
Sbjct: 61 SKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFG 120
Query: 352 -CARTIYCTNIDKKVTQADVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEFVMV 404
R +Y N+ +T+ ++ FE E+ +L L + FV+F +
Sbjct: 121 AVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQL 175
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 243 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAF 300
+S ++L +EE +R++Y+ ++D Q T EQL F G V I D S +A+
Sbjct: 37 SSDSTLQAQEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAY 96
Query: 301 IEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAI 334
+EF + E A+ A+ L G+ +RV+ +T I
Sbjct: 97 VEFEEYESAQKAIEELNGSPFRGRELRVMTKRTNI 131
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 245 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 299
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 300 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 355
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 183
Query: 356 -IYCTNIDKKVTQADVKLFFE 375
+Y N ++ +K FFE
Sbjct: 184 NVYVKNFTEEFDDEKLKEFFE 204
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 210 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 269
S + + +A +N N A + ++ + TS A ++YV ++D VT
Sbjct: 9 SPVQDGADANGAQINTNVAAAQAEA--------PTPTSAAPAHNQNSASLYVGELDPSVT 60
Query: 270 EEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALNLAGTMLGFYPVR 326
E L LF GQV R+C D + L +A++ + + E+G +A L T++ P R
Sbjct: 61 EAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCR 120
Query: 327 VL 328
++
Sbjct: 121 IM 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,596,141,522
Number of Sequences: 23463169
Number of extensions: 269729373
Number of successful extensions: 995534
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 3365
Number of HSP's that attempted gapping in prelim test: 976321
Number of HSP's gapped (non-prelim): 17883
length of query: 437
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 291
effective length of database: 8,933,572,693
effective search space: 2599669653663
effective search space used: 2599669653663
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)